Lag0004539 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0004539
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Transcription initiation factor TFIID subunit 10
Location	chr6: 4756763 .. 4759769 (-)
RNA-Seq Expression	Lag0004539
Synteny	Lag0004539

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCATAGCCAACAAGCGACAGAGAGCAGGCACGACGATGACGCTGCGCTCTCCGAGTTTCTAGCATCTCTAATGGAGTATACTCCCACTGTAAGATCTCACAATGATGCTTCTTGACTCCAACTCGCTTCTTTTCCCGCACGCGTTTTTCTGCAATTTCAAATCTTGTTGGGTTTTTCTTTTTTCAGATTCCAGACGAGTTGGTGGAGCATTACTTAGGGAAGAGTGGATTTCAGTGTCCTGACGTTCGATTGTAGGTATCTTTTCGTTTTTTTTTTTTTTTTTTAAATTTCCGTTCATCAAAACCCTAGGTTTAGAGTGCGGTTTCTCGACCGATAGATGAGATCGATTTTGTCTTTCTCCTAGTGTTGTGATTGGTATTGTTTTGTTTCCACGACTTAATCGTAATTGAAGATTTTTCCATTAAATGGGTGGGTGGGTTGTTGACTGTTACGATATCAAAGTGAAAGCTTATTTACGGTGTGGGTTGCAATTAGGGGATTTCTTATTTTGAGTATTTTTTGTTCTAAAGAAAAAATGTTCGTTGTTGTTGCTGATTTTTGTTGGGAAGTTGCCTCTACATTGGAGGAGCAGGGAACTTTTAATCGCAGTTCCCACCTCATTCCCTGTGAAGAAATGGGGAATTCTCGCCGGGGTTCCCAGTGGTCTAAATTGTTGATATATACATTGTAGGTCAGACACAAAATATGCTTACCCGGTTTGTTCTGTAATAGTGTTAATAAACATGAAGATGGCCTTTTTAGTGTTCATAGTGGCATTCATGGTGGCTAACATTGATGCCAACTTTTGATTTCAACGAGTGGTGTTATTAGTGGCTGCATTTCTATGCTGAGAATTGTGCACATGGGAAAGGTAGCAAAGTTAATCTAATTCAGAGAATAATCATATTTTGCGGCAGTACTTTGCTGTCTTTGTAATTGAGCTGTGATGTTATCTTTGAAGTTATTAAATTTTTTCCATTTCTTTTCCAACGACTCTTCTACTCCTGTCTGCCATTTCATTTCTTACTTTTTTCCTAAAGTTGCAAGTCTAAAATTTTGCAAAATGTAGAGGATGTAATTCATTTGAGATCTTAGACTATTTTGAGATGAATTCTTTAACCTTGGGCTGGTTAATTGCTTTGTATGTAAAGTGATAGTTTGGATTAGCTTTAAATGCGTTCAACATCAATGTGTGATGTTTGTAATGAAGAAATTGTTTATCTATTTTGTGTGAAGACTAGTTTACATTTTTCCTAATAGAGCTTCACTTTTGCAGGATCAGGCTTGTAGCTGTTGCCACGCAGAAGTTTGTTGCAGATGTTGCTAGTGATGCTCTCCAGTACGCTTGCTTTCTTCTGATTCCTTTTGGTGCATATATAAAAATTCTTTCTTTTTCTTTAATCTTTTCTCTCCCCTGCTCCCCTCACCCAAAAGCTCACACACTCTCATTTTGCCTGAGGGGTGCAAGTAAAGTATGACCAGAACTTGAGTTGTAGACCTTTTCATTTTAATAACTTGATAGTGAGAATGCAAGTGGTTAATTTGATGGGATTGGCTCCAAGAGTTTGAGAACCAACTTGTTGACAACAATCCTATGCTACAAAATATTAGACTCTTTTTAGAGTGTTACAACCACTTAGCCAGGAGGGTAAAGTTATTTCCAAATTCCTAATGCCCAACCTGCGCTTATTGCATGACTTGGAAATTTCCTACCACTCAACAAAATGAGACTCTTATTCATCCTCTCAATTCCCTTCCAAAAAAATCCTTTATAATCCTTTCCAACTTGGAACAAAAGACTACAAAATCCTTAATAACTATAGAAATTTGATAGGATCCCACTAAAGGTAATTGGATTAACGTTGATCTCTCACTCTTTGAGAACAAGGCTTTCTCCCATAAAAGATAACTGTTCCTAAATATGTCATGGGAAGTGAAGAAGCCTCGCAACTGAATGTATAATTCCACCTTTCAAGATTACCAGGATTACAAGGAAGAGACTTATTGAACATTTCTCACTGCAAATCCCAACAATTAGCGAACTATAACAAACAGCTATTAGAGGAACGGTTTACTCTCAATAATCCTCTACAACTGCCCTCGCACCTATTAATCATTCTTCTTCAACCTCAATGACTGCCTTATTATTGTTTGGCAGGCATTGGGTGATTATCATCTCTTTCCCATGCCCTTTCATGTACTTGGGGAGATTTTTGTGGGTTTTTCACTACGTTCACAACAACAGTTGGATATTCATAGCTGCTTGAGTTGGTAAAAGTTTTAAAGAAGTTTTAACTTATTTGGTTGTGCAATGTAGGCATTGTAAGGCAAGACAGGCAGCAGTAGTGAAAGACAAAAGGGATAAACAACAAAAGGTGCATCTTTTGTAACCTTGAGTCTCTTGATTAATAAACTATTTGGCCAGTCTAACATTCTGCTGGTTCAGGATAAGCGCTTAATATTGACCATGGAGGATCTCTCGAAGGCACTTCGTGAGGTAAACTAAAAATGTTATACTTTTACTCCTTTTCCAATTATCAGGCTCTTGTGCTTACGATGGATAATTGATAATTCATATACAGACATAAGAGATCATTAGTTTGATTTTGGTACATACTCTTATGTTTAGGTGGTGTCGTGGTGCTATGGGTGGGATATTTTTATGGTTGAAGTGATCTGTCATAAAGTTTGTCGGGTTTATTTGTGTTATAGATTCCTGACAGGCTGTAATCTTGTAAAAAATTTGTTATTTTTAGTTCTTCAAATTGCATGGTGCATCCTCAACGTTATACAGTTTCCACTCAGGGGGGGGGGGGTACAGATTGATATTGTCTCATTTTATGATACTATTTTGAACATAGACCCTGAAGGATCAAGTTCCTTATCCATAACTAACTGCATTGTTGGTACTTGGTGAACAGTATGGAGTGAATGTGAAACACCAAGAATATTTTGCTGATAGCCCTTCAACTGGAGTGGATCCTACTTCCAGAGAGGAATGA

mRNA sequence

ATGAACCATAGCCAACAAGCGACAGAGAGCAGGCACGACGATGACGCTGCGCTCTCCGAGTTTCTAGCATCTCTAATGGAGTATACTCCCACTATTCCAGACGAGTTGGTGGAGCATTACTTAGGGAAGAGTGGATTTCAGTGTCCTGACGTTCGATTGATCAGGCTTGTAGCTGTTGCCACGCAGAAGTTTGTTGCAGATGTTGCTAGTGATGCTCTCCAGCATTGTAAGGCAAGACAGGCAGCAGTAGTGAAAGACAAAAGGGATAAACAACAAAAGGATAAGCGCTTAATATTGACCATGGAGGATCTCTCGAAGGCACTTCGTGAGTATGGAGTGAATGTGAAACACCAAGAATATTTTGCTGATAGCCCTTCAACTGGAGTGGATCCTACTTCCAGAGAGGAATGA

Coding sequence (CDS)

ATGAACCATAGCCAACAAGCGACAGAGAGCAGGCACGACGATGACGCTGCGCTCTCCGAGTTTCTAGCATCTCTAATGGAGTATACTCCCACTATTCCAGACGAGTTGGTGGAGCATTACTTAGGGAAGAGTGGATTTCAGTGTCCTGACGTTCGATTGATCAGGCTTGTAGCTGTTGCCACGCAGAAGTTTGTTGCAGATGTTGCTAGTGATGCTCTCCAGCATTGTAAGGCAAGACAGGCAGCAGTAGTGAAAGACAAAAGGGATAAACAACAAAAGGATAAGCGCTTAATATTGACCATGGAGGATCTCTCGAAGGCACTTCGTGAGTATGGAGTGAATGTGAAACACCAAGAATATTTTGCTGATAGCCCTTCAACTGGAGTGGATCCTACTTCCAGAGAGGAATGA

Protein sequence

MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEYFADSPSTGVDPTSREE

Homology

[Close]

BLAST of Lag0004539 vs. NCBI nr
Match: XP_022132183.1 (transcription initiation factor TFIID subunit 10 [Momordica charantia])

HSP 1 Score: 262.3 bits (669), Expect = 2.3e-66
Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNHSQQ TE RHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHSQQGTEGRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQA++VKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQASIVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDPTSREE 137
           FADSPSTGVDPTSREE
Sbjct: 121 FADSPSTGVDPTSREE 136

[Close]

BLAST of Lag0004539 vs. NCBI nr
Match: XP_008445293.1 (PREDICTED: transcription initiation factor TFIID subunit 10 isoform X1 [Cucumis melo])

HSP 1 Score: 261.2 bits (666), Expect = 5.1e-66
Identity = 134/136 (98.53%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNHSQQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDPTSREE 137
           FADSPSTGVD TSREE
Sbjct: 121 FADSPSTGVDSTSREE 136

[Close]

BLAST of Lag0004539 vs. NCBI nr
Match: XP_038886703.1 (transcription initiation factor TFIID subunit 10 isoform X1 [Benincasa hispida])

HSP 1 Score: 261.2 bits (666), Expect = 5.1e-66
Identity = 134/136 (98.53%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNHSQQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 20  MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 79

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY
Sbjct: 80  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 139

Query: 121 FADSPSTGVDPTSREE 137
           FADSPSTGVD TSREE
Sbjct: 140 FADSPSTGVDSTSREE 155

[Close]

BLAST of Lag0004539 vs. NCBI nr
Match: KAG6598532.1 (Transcription initiation factor TFIID subunit 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNHSQQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 292 MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 351

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTM+DLSKALREYGVNVKHQEY
Sbjct: 352 TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 411

Query: 121 FADSPSTGVDPTSREE 137
           FADSPSTGVD TSREE
Sbjct: 412 FADSPSTGVDSTSREE 427

[Close]

BLAST of Lag0004539 vs. NCBI nr
Match: XP_022962589.1 (transcription initiation factor TFIID subunit 10 [Cucurbita moschata] >XP_022997339.1 transcription initiation factor TFIID subunit 10 [Cucurbita maxima] >XP_023547186.1 transcription initiation factor TFIID subunit 10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNHSQQAT SRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHSQQATGSRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTM+DLSKALREYGVNVKHQEY
Sbjct: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMDDLSKALREYGVNVKHQEY 120

Query: 121 FADSPSTGVDPTSREE 137
           FADSPSTGVD TSREE
Sbjct: 121 FADSPSTGVDSTSREE 136

[Close]

BLAST of Lag0004539 vs. ExPASy Swiss-Prot
Match: O04173 (Transcription initiation factor TFIID subunit 10 OS=Arabidopsis thaliana OX=3702 GN=TAF10 PE=1 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 9.8e-60
Identity = 116/136 (85.29%), Postives = 127/136 (93.38%), Query Frame = 0


Query: 1   MNHSQQATESRHDDDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVA 60
           MNH QQ+ E++H+DDAAL+EFLASLM+YTPTIPD+LVEHYL KSGFQCPDVRLIRLVAVA
Sbjct: 1   MNHGQQSGEAKHEDDAALTEFLASLMDYTPTIPDDLVEHYLAKSGFQCPDVRLIRLVAVA 60

Query: 61  TQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 120
           TQKFVADVASDALQHCKAR A VVKDK  KQQKDKRL+LTMEDLSKALREYGVNVKH EY
Sbjct: 61  TQKFVADVASDALQHCKARPAPVVKDK--KQQKDKRLVLTMEDLSKALREYGVNVKHPEY 120

Query: 121 FADSPSTGVDPTSREE 137
           FADSPSTG+DP +R+E
Sbjct: 121 FADSPSTGMDPATRDE 134

[Close]

BLAST of Lag0004539 vs. ExPASy Swiss-Prot
Match: Q12962 (Transcription initiation factor TFIID subunit 10 OS=Homo sapiens OX=9606 GN=TAF10 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.3e-23
Identity = 52/104 (50.00%), Postives = 74/104 (71.15%), Query Frame = 0


Query: 18  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCK 77
           L +FL  L +YTPTIPD +  +YL ++GF+  D R+IRL+++A QKF++D+A+DALQHCK
Sbjct: 116 LVDFLMQLEDYTPTIPDAVTGYYLNRAGFEASDPRIIRLISLAAQKFISDIANDALQHCK 175

Query: 78  ARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEYF 122
            +  A    +   + KD++  LTMEDL+ AL EYG+NVK   YF
Sbjct: 176 MKGTASGSSR--SKSKDRKYTLTMEDLTPALSEYGINVKKPHYF 217

[Close]

BLAST of Lag0004539 vs. ExPASy Swiss-Prot
Match: Q8K0H5 (Transcription initiation factor TFIID subunit 10 OS=Mus musculus OX=10090 GN=Taf10 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.3e-23
Identity = 52/104 (50.00%), Postives = 74/104 (71.15%), Query Frame = 0


Query: 18  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCK 77
           L +FL  L +YTPTIPD +  +YL ++GF+  D R+IRL+++A QKF++D+A+DALQHCK
Sbjct: 116 LVDFLMQLEDYTPTIPDAVTGYYLNRAGFEASDPRIIRLISLAAQKFISDIANDALQHCK 175

Query: 78  ARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEYF 122
            +  A    +   + KD++  LTMEDL+ AL EYG+NVK   YF
Sbjct: 176 MKGTASGSSR--SKSKDRKYTLTMEDLTPALSEYGINVKKPHYF 217

[Close]

BLAST of Lag0004539 vs. ExPASy Swiss-Prot
Match: Q9XZT7 (Transcription initiation factor TFIID subunit 10b OS=Drosophila melanogaster OX=7227 GN=Taf10b PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.4e-20
Identity = 47/104 (45.19%), Postives = 68/104 (65.38%), Query Frame = 0


Query: 18  LSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCK 77
           LS+F++ L +YTP IPD +  HYL   GFQ  D R++RL+++A QK+++D+  DALQH K
Sbjct: 41  LSDFMSQLEDYTPLIPDAVTSHYLNMGGFQSDDKRIVRLISLAAQKYMSDIIDDALQHSK 100

Query: 78  AR-QAAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEY 121
           AR            + KD++  LTMEDL  AL +YG+NV+  +Y
Sbjct: 101 ARTHMQTTNTPGGSKAKDRKFTLTMEDLQPALADYGINVRKVDY 144

[Close]

BLAST of Lag0004539 vs. ExPASy Swiss-Prot
Match: Q9U5W9 (Transcription initiation factor TFIID subunit 10 OS=Drosophila melanogaster OX=7227 GN=Taf10 PE=1 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 4.1e-18
Identity = 45/114 (39.47%), Postives = 71/114 (62.28%), Query Frame = 0


Query: 14  DDAALSEFLASLMEYTPTIPDELVEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDAL 73
           +++ + E +  L +Y+PTIPD L  H L  +GF   D +++RLV+V+ QKF++D+A+DAL
Sbjct: 53  EESEMDELIKQLEDYSPTIPDALTMHILKTAGFCTVDPKIVRLVSVSAQKFISDIANDAL 112

Query: 74  QHCKARQAAV------VKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEYF 122
           QHCK R   +         K  K  KD++  L MEDL  AL ++G+ ++  +YF
Sbjct: 113 QHCKTRTTNIQHSSGHSSSKDKKNPKDRKYTLAMEDLVPALADHGITMRKPQYF 166

The following BLAST results are available for this feature:

BLAST of Lag0004539 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132183.1	2.3e-66	97.06	transcription initiation factor TFIID subunit 10 [Momordica charantia]	[more]
XP_008445293.1	5.1e-66	98.53	PREDICTED: transcription initiation factor TFIID subunit 10 isoform X1 [Cucumis ...	[more]
XP_038886703.1	5.1e-66	98.53	transcription initiation factor TFIID subunit 10 isoform X1 [Benincasa hispida]	[more]
KAG6598532.1	1.1e-65	97.79	Transcription initiation factor TFIID subunit 10, partial [Cucurbita argyrosperm...	[more]
XP_022962589.1	1.1e-65	97.79	transcription initiation factor TFIID subunit 10 [Cucurbita moschata] >XP_022997...	[more]

BLAST of Lag0004539 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04173	9.8e-60	85.29	Transcription initiation factor TFIID subunit 10 OS=Arabidopsis thaliana OX=3702...	[more]
Q12962	4.3e-23	50.00	Transcription initiation factor TFIID subunit 10 OS=Homo sapiens OX=9606 GN=TAF1...	[more]
Q8K0H5	4.3e-23	50.00	Transcription initiation factor TFIID subunit 10 OS=Mus musculus OX=10090 GN=Taf...	[more]
Q9XZT7	4.4e-20	45.19	Transcription initiation factor TFIID subunit 10b OS=Drosophila melanogaster OX=...	[more]
Q9U5W9	4.1e-18	39.47	Transcription initiation factor TFIID subunit 10 OS=Drosophila melanogaster OX=7...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003923	Transcription initiation factor TFIID, 23-30kDa subunit	PRINTS	PR01443	TFIID30KDSUB	coord: 96..118 score: 56.52 coord: 50..72 score: 64.35 coord: 30..46 score: 60.0
IPR003923	Transcription initiation factor TFIID, 23-30kDa subunit	PIRSF	PIRSF017246	TFIID_TAF10	coord: 1..122 e-value: 3.1E-54 score: 182.1
IPR003923	Transcription initiation factor TFIID, 23-30kDa subunit	PFAM	PF03540	TFIID_30kDa	coord: 30..79 e-value: 1.0E-24 score: 86.2
IPR003923	Transcription initiation factor TFIID, 23-30kDa subunit	PANTHER	PTHR21242	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10	coord: 5..121
IPR003923	Transcription initiation factor TFIID, 23-30kDa subunit	CDD	cd07982	TAF10	coord: 16..121 e-value: 2.56174E-57 score: 171.64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0004539.1	Lag0004539.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016573	histone acetylation
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
biological_process	GO:0006413	translational initiation
biological_process	GO:0006352	DNA-templated transcription, initiation
cellular_component	GO:0000124	SAGA complex
cellular_component	GO:0005669	transcription factor TFIID complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:1990841	promoter-specific chromatin binding
molecular_function	GO:0016251	RNA polymerase II general transcription initiation factor activity
molecular_function	GO:0003743	translation initiation factor activity