Lag0004531 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0004531
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Glutamate receptor
Location	chr6: 4688307 .. 4689893 (-)
RNA-Seq Expression	Lag0004531
Synteny	Lag0004531

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAGGAGAAGAAAGGGTTTGACTGTTGGTTTTGGAGTGTTGGTGATCGTTCTCTTCGTGGCGGCGGCGGCAGCACAGGAGGGGGCGGAGGAGGAGGAGGCGGCAGTGAAAGTAATGGTGGGTGTGGTTTTGGATTTGAATGTCACTGTTGGGAAGATGGGTCTGAGTTGTATTTCAATGGCTCTTATTGATTTCTATTCTTCTCGGAGTTATTATAAGACGAGAGTGATTCTCAATCCCATCGACTCCAATGACACTGTTGTTGGTGCAGCTGCTGCAGGTTTTATCTTTCTCACTTTATCTAAAAATAATATTATCCAATATTTTGTGTTCAATCCTAATACATATAATATAATGTTCAAATATTTAGTTTAAATTCCTAAGCTTGTTGAAGTTTGGACCGTTCAAAAGCTGATCCATTTTCATTTTTTAATTTGAAGTAAAAAAAAAATATTTTATTTTTTTCCAAATGAACATTTTACATAAGAATGTATTGATTTGTGTTTTAAGCCTACAGTGTGGTTTTTTTTTTTTAAGTTGAACAACTATGGGATATGAGAAATGAAATTGTATATTGAGGAGGCGGAGATGAAATATAAAACTAAAATATAAACTTATATCGTGAAATAGGTGTGTTACTGATTTATTTATGGATGTTTGATAACCTATTGATTTTTACCACCCCTGAAGTATGATTGTTTGTAACAATTACACCCTTAAAGTTTCAATGGTAAAAATTAAACCCTCAAACTTTTAAAAGTGTTAAAATTAGAACCCTAAAGTCTTGAATGTTAAAATTAAACCCCAATCTATCATAAATGTAAAAATGAAGTCCATTCCATATTTTTCCTTTTTCTCTCCTCTTTACTCTCTCTCCTTTCTCCACCTCTTCATCCTTCCCATCACCCACTCTCTCTCTACTTTCTCCCTCTACCTCTCCATCCTTTCTTCTCATTCTAAAGACGGGTGATTTTGGGGTTCCTCTTTGTGGGTATAGTTGTAGAGCTTTACTATCTGCTATGGCGGAAGAATCAACATTACAGAGGTTGAAGACGACAAGTATAACAAAAGGGCCACTTCATTTGATTCCTTCTGAAACCAACACCACTCGCGAAATTACCAGAAACCCACTTGAGGACCGCCATGGATTCGACCTCGAGCTCGGCTGCAAGTGAAGATTTGTTGTTGAAGATGATCGAGGAAGACGACGAAGATGAGGTAGAGGATTTGGAGTTGATGGGGATTTAGAATCTCGCAGGGTAGCCAAGATTTTTCTTCACGATCAAAGAGGAAATCAAGGAAGATTTGGAATCTGAAGATCATGCGAAATCTAGAGGCAGTATAAGCGAAAAAGGGTCGAGAAACAGAATCTTGAGTGATATAATCACAACGATTCAAACGCCGTTCTTCACTCCCATGGCTTCTCCTCTGAGCTCTTTAGACTCGTACAAGCTTCATGGATTCAATCCCCTCTTTGAATCGTTGGCAGAATTGGAGCAACATTTGAACAGGTTGAGATATTCTCCTCCTCCCCCCAAGTTCAAATTTCCCAGAGATGCAGAGGAGAAATTGTACAAAGACTAA

mRNA sequence

ATGATGAGGAGAAGAAAGGGTTTGACTGTTGGTTTTGGAGTGTTGGTGATCGTTCTCTTCGTGGCGGCGGCGGCAGCACAGGAGGGGGCGGAGGAGGAGGAGGCGGCAGTGAAAGTAATGGTGGGTGTGGTTTTGGATTTGAATGTCACTGTTGGGAAGATGGGTCTGAGTTGTATTTCAATGGCTCTTATTGATTTCTATTCTTCTCGGAGTTATTATAAGACGAGAGTGATTCTCAATCCCATCGACTCCAATGACACTGTTGTTGGTGCAGCTGCTGCAGAAACCCACTTGAGGACCGCCATGGATTCGACCTCGAGCTCGGCTGCAAGTGAAGATTTGTTGTTGAAGATGATCGAGGAAGACGACGAAGATGAGGAAGATTTGGAATCTGAAGATCATGCGAAATCTAGAGGCAGTATAAGCGAAAAAGGGTCGAGAAACAGAATCTTGAGTGATATAATCACAACGATTCAAACGCCGTTCTTCACTCCCATGGCTTCTCCTCTGAGCTCTTTAGACTCGTACAAGCTTCATGGATTCAATCCCCTCTTTGAATCGTTGGCAGAATTGGAGCAACATTTGAACAGGTTGAGATATTCTCCTCCTCCCCCCAAGTTCAAATTTCCCAGAGATGCAGAGGAGAAATTGTACAAAGACTAA

Coding sequence (CDS)

ATGATGAGGAGAAGAAAGGGTTTGACTGTTGGTTTTGGAGTGTTGGTGATCGTTCTCTTCGTGGCGGCGGCGGCAGCACAGGAGGGGGCGGAGGAGGAGGAGGCGGCAGTGAAAGTAATGGTGGGTGTGGTTTTGGATTTGAATGTCACTGTTGGGAAGATGGGTCTGAGTTGTATTTCAATGGCTCTTATTGATTTCTATTCTTCTCGGAGTTATTATAAGACGAGAGTGATTCTCAATCCCATCGACTCCAATGACACTGTTGTTGGTGCAGCTGCTGCAGAAACCCACTTGAGGACCGCCATGGATTCGACCTCGAGCTCGGCTGCAAGTGAAGATTTGTTGTTGAAGATGATCGAGGAAGACGACGAAGATGAGGAAGATTTGGAATCTGAAGATCATGCGAAATCTAGAGGCAGTATAAGCGAAAAAGGGTCGAGAAACAGAATCTTGAGTGATATAATCACAACGATTCAAACGCCGTTCTTCACTCCCATGGCTTCTCCTCTGAGCTCTTTAGACTCGTACAAGCTTCATGGATTCAATCCCCTCTTTGAATCGTTGGCAGAATTGGAGCAACATTTGAACAGGTTGAGATATTCTCCTCCTCCCCCCAAGTTCAAATTTCCCAGAGATGCAGAGGAGAAATTGTACAAAGACTAA

Protein sequence

MMRRRKGLTVGFGVLVIVLFVAAAAAQEGAEEEEAAVKVMVGVVLDLNVTVGKMGLSCISMALIDFYSSRSYYKTRVILNPIDSNDTVVGAAAAETHLRTAMDSTSSSAASEDLLLKMIEEDDEDEEDLESEDHAKSRGSISEKGSRNRILSDIITTIQTPFFTPMASPLSSLDSYKLHGFNPLFESLAELEQHLNRLRYSPPPPKFKFPRDAEEKLYKD

Homology

[Close]

BLAST of Lag0004531 vs. NCBI nr
Match: XP_023523159.1 (uncharacterized protein LOC111787432 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-26
Identity = 85/137 (62.04%), Postives = 92/137 (67.15%), Query Frame = 0


Query: 100 TAMDSTSSSAASEDLLLKMIEE-----------DDEDEEDLESEDHAKSRGSISEKGSRN 159
           TA D     A  ED+ L  I              +E  EDLESED AKSRG  S KGSRN
Sbjct: 92  TAEDDEHDEAEEEDVELMAIYNLAGQPRFLFTIKEETREDLESED-AKSRGDRSRKGSRN 151

Query: 160 RILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNPLFESLAELEQHLNRLRYSP 219
           R LSDIIT I+TPFFTP+      ASPL SLDSYKLH FNPLFES AELEQ+LNR+R S 
Sbjct: 152 RSLSDIITAIETPFFTPIASPPLKASPLCSLDSYKLHEFNPLFESSAELEQNLNRMR-SS 211

[Close]

BLAST of Lag0004531 vs. NCBI nr
Match: XP_022948541.1 (uncharacterized protein LOC111452187 [Cucurbita moschata])

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-26
Identity = 85/146 (58.22%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 110 ASEDLLLKMIEEDDEDE------------------------------EDLESEDHAKSRG 169
           + EDLLLK   EDDE +                              EDLESED AKSRG
Sbjct: 83  SGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQPRFLFTIKEETREDLESED-AKSRG 142

Query: 170 SISEKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNPLFESLAELEQ 220
             S KGSRNR LSDIIT I+TPFFTP+      ASPL SLDSYKLH FNPLFES +ELEQ
Sbjct: 143 DRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCSLDSYKLHEFNPLFESSSELEQ 202

[Close]

BLAST of Lag0004531 vs. NCBI nr
Match: KAG6607234.1 (hypothetical protein SDJN03_00576, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-26
Identity = 85/146 (58.22%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 110 ASEDLLLKMIEEDDEDE------------------------------EDLESEDHAKSRG 169
           + EDLLLK   EDDE +                              EDLESED AKSRG
Sbjct: 83  SGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQPRFLFTIKEETREDLESED-AKSRG 142

Query: 170 SISEKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNPLFESLAELEQ 220
             S KGSRNR LSDIIT I+TPFFTP+      ASPL SLDSYKLH FNPLFES +ELEQ
Sbjct: 143 DRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCSLDSYKLHEFNPLFESSSELEQ 202

[Close]

BLAST of Lag0004531 vs. NCBI nr
Match: XP_022997949.1 (uncharacterized protein LOC111492746 [Cucurbita maxima] >XP_022997950.1 uncharacterized protein LOC111492746 [Cucurbita maxima])

HSP 1 Score: 129.0 bits (323), Expect = 4.9e-26
Identity = 90/174 (51.72%), Postives = 104/174 (59.77%), Query Frame = 0


Query: 66  FYSSRSYYKTRVILNPIDSN---DTVVGAAAAETHLRTAMDSTSSSAASEDLLLKMIEE- 125
           F  S +     +  NP+++    D   G+        TA D     A  ED+ L  I   
Sbjct: 55  FIPSETNSTREITRNPLENRHGLDLEFGSGEDLLLKTTAEDYEHDEAEDEDVELMAIYNL 114

Query: 126 ----------DDEDEEDLESEDHAKSRGSISEKGSRNRILSDIITTIQTPFFTPM----- 185
                      +E  EDLESED AKSRG  S KGSRNR LSDIIT I+TPFFTP+     
Sbjct: 115 AGQPRFLFTIKEETREDLESED-AKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPL 174

Query: 186 -ASPLSSLDSYKLHGFNPLFESLAELEQHLNRLRYSPPPPKFKFPRDAEEKLYK 220
            ASPL SLDSYKLH FNPLFES A+LEQ+LNR+R S PPPKFKF RDAEEKLY+
Sbjct: 175 KASPLCSLDSYKLHEFNPLFESSADLEQNLNRMR-SSPPPKFKFLRDAEEKLYR 226

[Close]

BLAST of Lag0004531 vs. NCBI nr
Match: XP_038893882.1 (uncharacterized protein LOC120082683 [Benincasa hispida])

HSP 1 Score: 116.7 bits (291), Expect = 2.5e-22
Identity = 74/106 (69.81%), Postives = 80/106 (75.47%), Query Frame = 0


Query: 122 DDEDEEDLESEDHAKSRGSISEKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDS 181
           ++E +EDLESED  KSR     KGSRNR LSDII  I TPFFTPM      ASPLSSL+S
Sbjct: 120 NEETKEDLESED-GKSR-----KGSRNRSLSDIIAAIDTPFFTPMASPPLKASPLSSLES 179

Query: 182 --YKLHGFNPLFESLAELEQHLNRLRYSPPPPKFKFPRDAEEKLYK 220
             YKLHGFNPLFES  ELEQ+L RLR S PPPKFKF RDAEEKLY+
Sbjct: 180 YNYKLHGFNPLFESSDELEQNLKRLR-SSPPPKFKFLRDAEEKLYR 218

[Close]

BLAST of Lag0004531 vs. ExPASy Swiss-Prot
Match: Q9LFN5 (Glutamate receptor 2.5 OS=Arabidopsis thaliana OX=3702 GN=GLR2.5 PE=2 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 4.8e-08
Identity = 34/84 (40.48%), Postives = 56/84 (66.67%), Query Frame = 0


Query: 15 LVIVLFVAAAAAQEGAEEEEAAVKVMVGVVLDLNVTVGKMGLSCISMALIDFYSSRSYYK 74
          L +++F+       G  ++E A++V VG+VL  NVT+  + L  I+M+L +FY++ + +K
Sbjct: 14 LWLLIFLVFLVLSLGKSQKE-ALQVKVGIVLGSNVTLADLSLRAINMSLSEFYNTHNGFK 73

Query: 75 TRVILNPIDSNDTVVGAAAAETHL 99
          TR++LN  DS  TVVGAAA+  +L
Sbjct: 74 TRIVLNVRDSKQTVVGAAASALYL 96

[Close]

BLAST of Lag0004531 vs. ExPASy Swiss-Prot
Match: Q9LFN8 (Glutamate receptor 2.6 OS=Arabidopsis thaliana OX=3702 GN=GLR2.6 PE=2 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 4.8e-08
Identity = 29/68 (42.65%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 31 EEEEAAVKVMVGVVLDLNVTVGKMGLSCISMALIDFYSSRSYYKTRVILNPIDSNDTVVG 90
          + ++  ++V VG+VLD N T+  + L  I+M+L +FY++ + +KTR++LN  DS  TVVG
Sbjct: 28 KSQQEVLQVQVGIVLDTNATLAALSLRAINMSLSEFYNTHNGFKTRIVLNIRDSKRTVVG 87

Query: 91 AAAAETHL 99
          AAA+  +L
Sbjct: 88 AAASALYL 95

[Close]

BLAST of Lag0004531 vs. ExPASy Swiss-Prot
Match: O81776 (Glutamate receptor 2.4 OS=Arabidopsis thaliana OX=3702 GN=GLR2.4 PE=2 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 7.0e-07
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 14 VLVIVLFVAAAAAQEGAEEEEAAVKVM-VGVVLDLNVTVGKMGLSCISMALIDFYSSRSY 73
          VLV ++F+      +G   +   ++V+ VGVV D+  T   + L  I+M+L DFYSSR  
Sbjct: 9  VLVFLVFIFGVKLGKG---QNTTIQVINVGVVTDVGTTASNLSLLAINMSLSDFYSSRPE 68

Query: 74 YKTRVILNPIDSNDTVVGAAAAETHL 99
           +TR++LN  DS D VVGAAAA   L
Sbjct: 69 SRTRLLLNFADSRDDVVGAAAAALDL 91

[Close]

BLAST of Lag0004531 vs. ExPASy Swiss-Prot
Match: Q9SHV1 (Glutamate receptor 2.2 OS=Arabidopsis thaliana OX=3702 GN=GLR2.2 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.5e-06
Identity = 27/67 (40.30%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 32 EEEAAVKVMVGVVLDLNVTVGKMGLSCISMALIDFYSSRSYYKTRVILNPIDSNDTVVGA 91
          ++    +V +GVV D+  +   + + CI+M+L DFYSSR  ++TR+++N  DS + VVGA
Sbjct: 25 QDNGKTQVNIGVVSDVGTSYPDVAMLCINMSLADFYSSRPQFQTRLVVNVGDSKNDVVGA 84

Query: 92 AAAETHL 99
          A A   L
Sbjct: 85 ATAAIDL 91

[Close]

BLAST of Lag0004531 vs. ExPASy Swiss-Prot
Match: O04660 (Glutamate receptor 2.1 OS=Arabidopsis thaliana OX=3702 GN=GLR2.1 PE=2 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-05
Identity = 35/87 (40.23%), Postives = 47/87 (54.02%), Query Frame = 0


Query: 14  VLVIVLFVAAAAAQEGAEEEEAAVKVMVGVVLDLNVTVGKMGLSCISMALIDFYSSRSYY 73
           VL ++ FV     Q G E +     V VG+V D+      M L CI+M+L DFYSS    
Sbjct: 8   VLSLLFFVIVFLMQVG-EAQNRITNVNVGIVNDIGTAYSNMTLLCINMSLSDFYSSHPET 67

Query: 74  KTRVILNPIDSNDTVVGAAAAETHLRT 101
           +TR++   +DS + VV AAAA   L T
Sbjct: 68  QTRLVTTVVDSKNDVVTAAAAALDLIT 93

[Close]

BLAST of Lag0004531 vs. ExPASy TrEMBL
Match: A0A6J1G9H1 (uncharacterized protein LOC111452187 OS=Cucurbita moschata OX=3662 GN=LOC111452187 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 8.2e-27
Identity = 85/146 (58.22%), Postives = 93/146 (63.70%), Query Frame = 0


Query: 110 ASEDLLLKMIEEDDEDE------------------------------EDLESEDHAKSRG 169
           + EDLLLK   EDDE +                              EDLESED AKSRG
Sbjct: 83  SGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQPRFLFTIKEETREDLESED-AKSRG 142

Query: 170 SISEKGSRNRILSDIITTIQTPFFTPM------ASPLSSLDSYKLHGFNPLFESLAELEQ 220
             S KGSRNR LSDIIT I+TPFFTP+      ASPL SLDSYKLH FNPLFES +ELEQ
Sbjct: 143 DRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCSLDSYKLHEFNPLFESSSELEQ 202

[Close]

BLAST of Lag0004531 vs. ExPASy TrEMBL
Match: A0A6J1KBC0 (uncharacterized protein LOC111492746 OS=Cucurbita maxima OX=3661 GN=LOC111492746 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-26
Identity = 90/174 (51.72%), Postives = 104/174 (59.77%), Query Frame = 0


Query: 66  FYSSRSYYKTRVILNPIDSN---DTVVGAAAAETHLRTAMDSTSSSAASEDLLLKMIEE- 125
           F  S +     +  NP+++    D   G+        TA D     A  ED+ L  I   
Sbjct: 55  FIPSETNSTREITRNPLENRHGLDLEFGSGEDLLLKTTAEDYEHDEAEDEDVELMAIYNL 114

Query: 126 ----------DDEDEEDLESEDHAKSRGSISEKGSRNRILSDIITTIQTPFFTPM----- 185
                      +E  EDLESED AKSRG  S KGSRNR LSDIIT I+TPFFTP+     
Sbjct: 115 AGQPRFLFTIKEETREDLESED-AKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPL 174

Query: 186 -ASPLSSLDSYKLHGFNPLFESLAELEQHLNRLRYSPPPPKFKFPRDAEEKLYK 220
            ASPL SLDSYKLH FNPLFES A+LEQ+LNR+R S PPPKFKF RDAEEKLY+
Sbjct: 175 KASPLCSLDSYKLHEFNPLFESSADLEQNLNRMR-SSPPPKFKFLRDAEEKLYR 226

[Close]

BLAST of Lag0004531 vs. ExPASy TrEMBL
Match: A0A6J1KPT9 (Glutamate receptor OS=Cucurbita maxima OX=3661 GN=LOC111496137 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.6e-22
Identity = 75/122 (61.48%), Postives = 86/122 (70.49%), Query Frame = 0


Query: 1   MMRRRKGLTVGFGVLVIVLF---VAAAAAQEGAEEEEAA--VKVMVGVVLDLNVTVGKMG 60
           MMRR KGL  GFGV+VIV+F   +   A  E A EEEAA  VKV VGVVLDLN+ VG+MG
Sbjct: 1   MMRRGKGLRGGFGVVVIVVFLNMLVTVATTEMAAEEEAAGKVKVKVGVVLDLNLVVGQMG 60

Query: 61  LSCISMALIDFYSSRSYYKTRVILNPIDSNDTVVGAAAA------ETHLRTAMDSTSSSA 112
           LSC+SMAL D YSSRSYYKTRV L+ IDSNDTVV AAAA      E  ++  +  TSS  
Sbjct: 61  LSCVSMALADLYSSRSYYKTRVTLSTIDSNDTVVDAAAAALDLIKEEEVQAIIGPTSSMQ 120

[Close]

BLAST of Lag0004531 vs. ExPASy TrEMBL
Match: A0A5A7V9M7 (Glutamate receptor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001760 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 4.7e-22
Identity = 69/106 (65.09%), Postives = 79/106 (74.53%), Query Frame = 0


Query: 2   MRRRKGLTVGFGVLVIVLFV-----AAAAAQEGAEEEE----AAVKVMVGVVLDLNVTVG 61
           MRR+KGL  GF V+V+V+F+     A A   E  EE+E    AAVKV VGVVLDLNV VG
Sbjct: 10  MRRKKGLGGGFRVVVVVIFLNILLTAVAKVTEPLEEKEAAAAAAVKVKVGVVLDLNVIVG 69

Query: 62  KMGLSCISMALIDFYSSRSYYKTRVILNPIDSNDTVVGAAAAETHL 99
           KM LSCISMAL DFY+SRSYYKTR+ILNPIDSN +V+ AAAA   L
Sbjct: 70  KMSLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAAALDL 115

[Close]

BLAST of Lag0004531 vs. ExPASy TrEMBL
Match: A0A1S3BBW2 (Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488371 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.3e-21
Identity = 69/107 (64.49%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 2   MRRRKGLTVGFGVLVIV------LFVAAAAAQEGAEEEE----AAVKVMVGVVLDLNVTV 61
           MRR+KGL  GF V+V+V      L  A A   E  EE+E    AAVKV VGVVLDLNV V
Sbjct: 1   MRRKKGLGGGFRVVVVVVIFLNILLTAVAKVTEPLEEKEAAAAAAVKVKVGVVLDLNVIV 60

Query: 62  GKMGLSCISMALIDFYSSRSYYKTRVILNPIDSNDTVVGAAAAETHL 99
           GKM LSCISMAL DFY+SRSYYKTR+ILNPIDSN +V+ AAAA   L
Sbjct: 61  GKMSLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAAALDL 107

[Close]

BLAST of Lag0004531 vs. TAIR 10
Match: AT5G59350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 5.8e-17
Identity = 58/101 (57.43%), Postives = 64/101 (63.37%), Query Frame = 0


Query: 123 DEDEEDLESEDHAKSR-GSISEKGSRNRILSDIITTIQTPFFTPMASPLSS---LDSYKL 182
           +E + DLESED  KSR GS     SR R LSD+     TP FTP+ASP  S   L+SY  
Sbjct: 127 EETKADLESEDGGKSRLGS----RSRRRSLSDVPNDCNTPGFTPLASPKKSSSPLESYPH 186

Query: 183 HGFNPLFESLAELEQHLNRLRYSPPPPKFKFPRDAEEKLYK 220
           HGFNPLFES  ELE +      S PPPKFKF RDAEEKL K
Sbjct: 187 HGFNPLFESDGELEFNKFFRSSSSPPPKFKFMRDAEEKLRK 223

[Close]

BLAST of Lag0004531 vs. TAIR 10
Match: AT5G11180.1 (glutamate receptor 2.6 )

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-09
Identity = 29/68 (42.65%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 31 EEEEAAVKVMVGVVLDLNVTVGKMGLSCISMALIDFYSSRSYYKTRVILNPIDSNDTVVG 90
          + ++  ++V VG+VLD N T+  + L  I+M+L +FY++ + +KTR++LN  DS  TVVG
Sbjct: 28 KSQQEVLQVQVGIVLDTNATLAALSLRAINMSLSEFYNTHNGFKTRIVLNIRDSKRTVVG 87

Query: 91 AAAAETHL 99
          AAA+  +L
Sbjct: 88 AAASALYL 95

[Close]

BLAST of Lag0004531 vs. TAIR 10
Match: AT4G31710.1 (glutamate receptor 2.4 )

HSP 1 Score: 55.8 bits (133), Expect = 4.9e-08
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 14  VLVIVLFVAAAAAQEGAEEEEAAVKVM-VGVVLDLNVTVGKMGLSCISMALIDFYSSRSY 73
           VLV ++F+      +G   +   ++V+ VGVV D+  T   + L  I+M+L DFYSSR  
Sbjct: 32  VLVFLVFIFGVKLGKG---QNTTIQVINVGVVTDVGTTASNLSLLAINMSLSDFYSSRPE 91

Query: 74  YKTRVILNPIDSNDTVVGAAAAETHL 99
            +TR++LN  DS D VVGAAAA   L
Sbjct: 92  SRTRLLLNFADSRDDVVGAAAAALDL 114

[Close]

BLAST of Lag0004531 vs. TAIR 10
Match: AT2G24720.1 (glutamate receptor 2.2 )

HSP 1 Score: 53.1 bits (126), Expect = 3.2e-07
Identity = 27/67 (40.30%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 32 EEEAAVKVMVGVVLDLNVTVGKMGLSCISMALIDFYSSRSYYKTRVILNPIDSNDTVVGA 91
          ++    +V +GVV D+  +   + + CI+M+L DFYSSR  ++TR+++N  DS + VVGA
Sbjct: 25 QDNGKTQVNIGVVSDVGTSYPDVAMLCINMSLADFYSSRPQFQTRLVVNVGDSKNDVVGA 84

Query: 92 AAAETHL 99
          A A   L
Sbjct: 85 ATAAIDL 91

[Close]

BLAST of Lag0004531 vs. TAIR 10
Match: AT5G27100.1 (glutamate receptor 2.1 )

HSP 1 Score: 51.6 bits (122), Expect = 9.3e-07
Identity = 35/87 (40.23%), Postives = 47/87 (54.02%), Query Frame = 0


Query: 14  VLVIVLFVAAAAAQEGAEEEEAAVKVMVGVVLDLNVTVGKMGLSCISMALIDFYSSRSYY 73
           VL ++ FV     Q G E +     V VG+V D+      M L CI+M+L DFYSS    
Sbjct: 8   VLSLLFFVIVFLMQVG-EAQNRITNVNVGIVNDIGTAYSNMTLLCINMSLSDFYSSHPET 67

Query: 74  KTRVILNPIDSNDTVVGAAAAETHLRT 101
           +TR++   +DS + VV AAAA   L T
Sbjct: 68  QTRLVTTVVDSKNDVVTAAAAALDLIT 93

The following BLAST results are available for this feature:

BLAST of Lag0004531 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023523159.1	1.7e-26	62.04	uncharacterized protein LOC111787432 [Cucurbita pepo subsp. pepo]	[more]
XP_022948541.1	1.7e-26	58.22	uncharacterized protein LOC111452187 [Cucurbita moschata]	[more]
KAG6607234.1	1.7e-26	58.22	hypothetical protein SDJN03_00576, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022997949.1	4.9e-26	51.72	uncharacterized protein LOC111492746 [Cucurbita maxima] >XP_022997950.1 uncharac...	[more]
XP_038893882.1	2.5e-22	69.81	uncharacterized protein LOC120082683 [Benincasa hispida]	[more]

BLAST of Lag0004531 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFN5	4.8e-08	40.48	Glutamate receptor 2.5 OS=Arabidopsis thaliana OX=3702 GN=GLR2.5 PE=2 SV=2	[more]
Q9LFN8	4.8e-08	42.65	Glutamate receptor 2.6 OS=Arabidopsis thaliana OX=3702 GN=GLR2.6 PE=2 SV=2	[more]
O81776	7.0e-07	43.02	Glutamate receptor 2.4 OS=Arabidopsis thaliana OX=3702 GN=GLR2.4 PE=2 SV=2	[more]
Q9SHV1	4.5e-06	40.30	Glutamate receptor 2.2 OS=Arabidopsis thaliana OX=3702 GN=GLR2.2 PE=2 SV=1	[more]
O04660	1.3e-05	40.23	Glutamate receptor 2.1 OS=Arabidopsis thaliana OX=3702 GN=GLR2.1 PE=2 SV=2	[more]

BLAST of Lag0004531 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G9H1	8.2e-27	58.22	uncharacterized protein LOC111452187 OS=Cucurbita moschata OX=3662 GN=LOC1114521...	[more]
A0A6J1KBC0	2.4e-26	51.72	uncharacterized protein LOC111492746 OS=Cucurbita maxima OX=3661 GN=LOC111492746...	[more]
A0A6J1KPT9	3.6e-22	61.48	Glutamate receptor OS=Cucurbita maxima OX=3661 GN=LOC111496137 PE=3 SV=1	[more]
A0A5A7V9M7	4.7e-22	65.09	Glutamate receptor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00...	[more]
A0A1S3BBW2	2.3e-21	64.49	Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488371 PE=3 SV=1	[more]

BLAST of Lag0004531 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59350.1	5.8e-17	57.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G11180.1	3.4e-09	42.65	glutamate receptor 2.6	[more]
AT4G31710.1	4.9e-08	43.02	glutamate receptor 2.4	[more]
AT2G24720.1	3.2e-07	40.30	glutamate receptor 2.2	[more]
AT5G27100.1	9.3e-07	40.23	glutamate receptor 2.1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..220
None	No IPR available	PANTHER	PTHR34054:SF6	TRANSMEMBRANE PROTEIN	coord: 123..219
None	No IPR available	PANTHER	PTHR34054	EXPRESSED PROTEIN	coord: 123..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0004531.1	Lag0004531.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042594	response to starvation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane