Lag0004440 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0004440
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr6: 3898611 .. 3898943 (+)
RNA-Seq Expression	Lag0004440
Synteny	Lag0004440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAATGGAAATGAAAGATAACCAACAGGCTATTATGGCCTTGATGGCGGGGCAATCAGTGAGCAAGGAGGCGTCCTCGTCGGATGTAACCTTGCAATCCTCGCAAAAGCAAAAGACAGTGGTGGAAGCAACAGTGGACACCAACCCGACGGAAACAGAGGAAGAACAGAATCGTGTTCAGAAAGACTTAGCCAGTGGTGATCGATGTAAGTTCAAAAAACTTGAGATGTCCGTTTTCTCTGGGGAGAACCCTGATTCCTGGTTGTTTCTAGACCAAATTGCCAAATTTTCTTCAATTTATACAACGAATAGTTCTCATCCACTTCCCTAA

mRNA sequence

ATGACAATGGAAATGAAAGATAACCAACAGGCTATTATGGCCTTGATGGCGGGGCAATCAGTGAGCAAGGAGGCGTCCTCGTCGGATGTAACCTTGCAATCCTCGCAAAAGCAAAAGACAGTGGTGGAAGCAACAGTGGACACCAACCCGACGGAAACAGAGGAAGAACAGAATCGTGTTCAGAAAGACTTAGCCAGTGGTGATCGATGTAAGTTCAAAAAACTTGAGATGTCCGTTTTCTCTGGGGAGAACCCTGATTCCTGGTTGTTTCTAGACCAAATTGCCAAATTTTCTTCAATTTATACAACGAATAGTTCTCATCCACTTCCCTAA

Coding sequence (CDS)

ATGACAATGGAAATGAAAGATAACCAACAGGCTATTATGGCCTTGATGGCGGGGCAATCAGTGAGCAAGGAGGCGTCCTCGTCGGATGTAACCTTGCAATCCTCGCAAAAGCAAAAGACAGTGGTGGAAGCAACAGTGGACACCAACCCGACGGAAACAGAGGAAGAACAGAATCGTGTTCAGAAAGACTTAGCCAGTGGTGATCGATGTAAGTTCAAAAAACTTGAGATGTCCGTTTTCTCTGGGGAGAACCCTGATTCCTGGTTGTTTCTAGACCAAATTGCCAAATTTTCTTCAATTTATACAACGAATAGTTCTCATCCACTTCCCTAA

Protein sequence

MTMEMKDNQQAIMALMAGQSVSKEASSSDVTLQSSQKQKTVVEATVDTNPTETEEEQNRVQKDLASGDRCKFKKLEMSVFSGENPDSWLFLDQIAKFSSIYTTNSSHPLP

Homology

The following BLAST results are available for this feature:

BLAST of Lag0004440 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0004440 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..48

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0004440.1	Lag0004440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003676	nucleic acid binding