Lag0004354 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0004354
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr6: 3155836 .. 3161826 (-)
RNA-Seq Expression	Lag0004354
Synteny	Lag0004354

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTGGACAAGCCCTGTTCTGTTTTTCATACTCTTTCTCTTTGGAGCTTGGCAATTCTTTGCAAAGAAGAAGGAGGCACTCACTTCATGGGGGCCAGACGACCCTTTTACTGCTACTTCACCTACTACTGGAGCCCCACTGGTAACTGGATCCAGCGAGCGAGCATCTTTCATAGACACTCCTTCAAGAAGTACTGATATGATGGATCTCAGAGGTGGCAGCGGCCTAAGAGGACCACCGCGGCGTTATGGTTCTCCTACAGGGTATCCTAGTGGCGCAACAAGTTCCTTTAGGCCAGCTACAGCAAGTGACCATAACTCAAGACCAGCTGCAGTTGATCCAAATTATAGAGCAGCTTCGGAGCTAAAATTTAGGGGCTCGCCTTTAGAACCTCCAGGATTTCCAAAACGACGGGAGCCTCTTTTTGCAAACAATCAGGTGGTCAATCAGGTGGTGGATGAAAGCAGTTAAAGAAAAGTAGGTATCAGTTAGAAATCCTTGCTTTAAAGAATTTCAAGTTCCTGAATCCTGATTACTTTTTCTTTTTTCCCGATTGCTTTTTTGCTGATCGGTATGAACGGTTTGATCTCGCAATACATCTATATCCCTGTTTTGTAGTTGCACGGAAAGGAAAAAAATAGTGAAATAATGCAAATTTTATTTTGAAATTGTTGCCCCCTCCTTGTTTACTTCTGATTAGGGTGTCCACAATAGTTACAAAAGGAGTCCATCATGCTTGCACAATGTTTAACATCGAAGCACAGAATCTAACTGAAATTCAGCTTCTTAATATAATGTAAAATTGTATATCGGGTAGAAATAGAAAGAATCACAAGTCTACGAATGTTATAGACTACTTATCCTGAAATGTGATCTAGATGCGCCGGTGTTCTTGCTCATCTGGGTATGTTTAGTTCTTACATTTTAATCTCCTTGCTCTCAAATTATCAATTTCTAGTATAGACGACTTATTGTTATCTGTATAATGTTCTTCTTGTTCAGTGTAAAGTGTATCATTATCAACAGCCTCGCCTCGTATATTCTTCCATTTTCATATGTATTTTCTTCTCCGTTTTTTTCCCTCTTTTCCCCATTTTCTTAGTAACCCCATTTCAATTTTGAGCCTCCGAACTGATTGAAGCTGTGAGAGTTCCATCAATGGCGGTTTCCCCCAATTGCAGAGCTATGGGGACAGTAGTGAGGAGGAGCTTTCGGTTCTTCCTCGTCATACCAAGGTCGTCATTACTGGAAATAATCAAACCAAATTGGTCCTCGTTGGACTTCAAGGCGTCGTCAAGAAAGCCGTTGGCCTTGGTGGGTGGCATTGGCTGGTAAATTTGTTTTTTTTACTCCGTTTCATTCATGTTGGATTGTATTAGAAATGGGGTTTCTGAAGAAACATTCAATTTCTTTGGATTCTCATTGTGGGTGATATCGTGAGTTGCAACCCCATCTGAATTCGGTGGTTTTGGGGTTATAATTCATGTATTCTGGTCAATGTCCGGCCAATTTCATCTGTTTTTCAGTTCGATTTTTGTGTATCAGATCTTGATGGATTCGTCTTTCTCGCTCTTTGTTTGTTAATTTTATTTGGTTTCTAGATCGTGTCTCATTAAATTCTGGATTCGAATTCTTCCTTTGGTTGCTATTAATAACTGAGGATATGGAGCTACCTTCAATATGCAACTAGTTTTTTAGGTTGGCATCTTCAATTTCTATCTTCCCCTCTTTAGTTGCATGTTCATTTAATCATTGAATCTCATAATTATGTTGGTTTTTCCATAATCTAGAATGAATTTGATAGTCATCTTTTAATACTTCAGCCCTTTTCTGTGCAGGATTGTTTTACTTATTTACTTTTGCTTATTCTGATTCAATATGTTGGATGAAACTATGATGGGTTTTTATCATTTTCATTGAAGTAGAAATTCCCCTTTTGGTTGATTAACTGTAAAATAATTTGTGCTTTATTTAAGTTGCGATTCTGATTCATTTTTCTTGGATGTGGCTTGGAATGGGGGAAAATGCAGGTTCTAGCAAATGGCATGGCCGTGAAACTACAACGGAATGCGCTTATCGTAATCGAGGCTCCAACGGGGAACGAGGAAGACAAAAACCTCGAATTCGAGAACTTGAAATCGAATGGGTTGGATATGGGTGAGTCTTGCAGCTGATGATTCAACGTCTCTGCTCAATCATTCATCTTTTTCTATTTTTGTTAGCCGTCTTGGAATTGAGTTTATCCCATAATTGTTGTCTGTCTGTGTCTGGCTGTTTTTGGATTGATGTCCTGATTTCTTTCTCATATTAACAAGTTACTAGTTAATGATTTGATCATTTGAAGTGAGAATCACTTTTCACCTCCCCACCCACCAAATATCCTTTTTTGTAGTTGTGGTTTTTACAGATCATGAGGTCAAACTTGTAGCTCTGCCTCTTTGTTATAGCCACAGCCATATCAAGAGACAAAGATTTATGCTTTTCTGAAACAAATATCAAAAGAAACATGTTTTAACTTTTTCATTGCAATTTTTGAAAAGGTGAATAAGTGCTTTTTATGTATTCTAAATGAGTTATTTTGATGTTTTGTTGTATAATTTTAGAGTGTTTTTTTTACTTTTTTTTTTAATGTTTTTCAGTCAAGTGCATAGACTAAATGTACTCTCTGAGTGCTTTATCCTAAATCATTTTGAGGTACTGAAATTTAGAATACAGGTGGTTTTAGCGATGACAAAAATGTTCTAAAAGCACTTCACTACCAAATCTCCTGTTATGAGAAGAGAGGGAAAGAATTGGACACGGGTTGTAATTTAAAGTTTATCCAATCATTTTATGTATGTGATATTTTAATTTTTAAATTGAGTAGAATTGTGAAAATTGCCTAATACACTCAACTATTTAGATGTATATATACATTTAAAATTTAGGCGAAATCCGAATACTTAAACAAACATCTAAATCCGAATAATCTTATCTACTCATCTTCAATACAATAATCTAGTTTAGAAGTGCAAATCAAAATTGACTTTTCTGTCACATAAATTACCGTTGTAAAATTTTACTATTTATTATTATTATTATTATTTTCCAAAAAAGAGTTTTTGTGCTTAAATAAGACTGGGATTTATGTTTTTAAAACGAAGTGATTGTTAGTAGTAATTTTTGTTGTTTTTAAAAACAATAATATATTTAATTTAGATGATTTTGAGATTTTAAGAATGTCCCTCCTTACATCACTCTCAAAACAATTATTTATGTTGACTTTAGCATATCTCAATTCGTAAATACTCTCATGCTTGTTGGGCTAAAAGGGAAAATATCCACTAATCTCTTTTTTCTTTATTATTATTGAGGTTATTATTGTTTTTATTTTCCCATTTGTGTTGTTTTAAATGTGATTCTCAGGTAATCAAAATGGATTTTGAAGATGACAAAAGTGATTTTAACCATTTCAAAATCACTCCCAAACATAAACTAAGATCATATAGTAAATATCGTACTGTTGTGGAGCTAGCTCCAAGTTCAAACTTATTTCTTAAGAAAAAAAAAAGTTGAGTTTTGAGAATTTATTTGAGACCAGCCAATACAATACTCAACTACATAAAACATATATATTAAAAATAATCGCAATCCAAAAGCCACAAGAAATAATTATGTTTATTTTTTTGGACAAATAAAATGGTTATTGATTTTTGTTTTAATCTTCTTGAAAGTTGGTAAACAACTCGATAAAAATAATTAACAGAAGTCGTGAATACGAAAGCTTCCAAAATAATAATGAACGTGTAATACATAATAAACTATAATTACTAAACTAATAATTCAACCTCAAATCTTTGCCAATATTTGAAAAAACATTGATTAAAAATTTAATGGTGGAATATCCATCTCTATAGAAGAATGTAAATTTGAATATATAGAAACTAGAAAGGGCAGGGACGGGCAGGGGCAGGGGCAGGGTCAGGGCAATTATATATATCTTCTGCCCTGCAGCGTACAGAGACAGGTGGGCAATCGAACAACCAATCATTTTATTTCTCTCTCTAACTTTTTTTTTAAATAATAAATAAATAAAATAAAATTGATAGGATTTGTGTTTGTCTCGTGATGTGTGAGAAAGTGTTGGGGTTGGGTCCATTCACACCTCAAATCCACAATTCCTTTTTTCAAATTTCAAATTCAAACCATCTTCTCATTCTACAAATACCTAACTTACATTTTTTTTTTGTTTTTTATTCACAAAAAATGATTGTTGTTCCCAAGGATAATTAACCGATCTATTAGATATAAAATTTTATATCTGATATAACTCGAGACACCCATAAAACTCTAAATGACATGATATTGTTCACTTTAAACATGAGTCCTTGTGGCTTTGTTTTTTATTCACCATAAAATGTCTCACATCGACAAAGATATTTGACGTCTCTTGTATACTTATAATCATTCTTTTGTTTAGTCAATGTGAGACTTTGGTCGCACGTCTCGATTCCCAACAATTTTATGTATAGCATGTCTATGAATTTTTAAAAATGTTGAATAGATTGATGATCTATTAGATATAAAATTCAAAATCTATGAACCTATTGAACACAAAATTGAAAATGTAAGGATGGATACAGACGATGAAGAGGAAGAAAAAAAGCACCCATGATTGACAATTTTAAATGAGACCGAGTTACAAGTTTAATCAACGAACTTTATAATTTGTATCTATTCAGTTTTGTGTCTAATAAATTCATAAGTTTTGAATTTTGTATCTAATAGGTCATCACCATATTCAGCCTCTTTTAAAATTTATAAAAAGACTAAACATAGAATTTGGAGTTATATTAGGCATAAAATTTAATTTAAAAAAAAAAAATCACTTTTTTATAATTTAAGATTTTAAATTGCCCTCAATAAATTTTGTAGGGAATAACACATGATTGAATTAAGTGAAATTTATTATATCTGTGATGGCATTGTAATTTTAAAGGTAAGAATTAAAATCTTACACTGTCTAATTTACTAGAAGAATAAATTAATTTGATATTGAAATGGAAAGCCACGTTGCTCGATTGCCAAGAAAAGAAAGGGACGATCGCAGCTTTTATTTCCCAAAACATAAAAAACAAACAGACGAAAGCAAAGTCTATGCCACGGACCAAAATAGTAACATTACCTTTTAAATACCATCCATTATTGTCTTATTGTTCATATGAACTTGTAATTTTTGCATTTTATAAACACATCTCTCATAATTAATTATATATTTTTAGACTCCACTACCATTATTTTTTCACTCAATTATAATGATATTATTTCGTATAGACTTGACAATTTTTTTCACAATGTTGTGGGTGATTCTGGACCACCTTAGAATCTAAGGACTAAACAGGACAACGTAACACCAACATGAAAGCTTGACCATGAAGCGGATCCTAGAGGAGAGCGAGCTAAAGGGATTAGGTCGTTCGACCCAATCCCATGTTTGGCCTCGACCGTGGGTCGAGGCCGACCACTCGGCCCACTCATGTGGGTCGAGTTTTCTCCCGTCCGTTCGGTTTCTGGTGCCTCTAGTCGTCCTGGTTCCACCTGGTTCAACCCGAATCGCCTTCGAACGCCTAAAAATCCTAGAGGAGGAACATGTATTGAAACCCTTCTTCGTCATTGAAGAAGGGGATCCCGAAACTCATTTCTTGAATTTTTTCCTCTTACTTTCCTCTTTTGCTCTCCTCTTTCAGCTCTTTGACTTAAGCATTGGAGGCGGTGTGACAAGCACCACACCCGTGTGCAGGTTTACTGTTTTGCAGACCACGTCTTCCACCCAAGTCTGTTGAGTCCCTGTTTAATGTAACCTCTTCGGAGGATGGTCTTCAGTCTGTCCCGTCAGTGTCTGTTATCATTTCTGAAGTCGAGTCGGCCCTGGAGGCCAGAGAGTCTGTAATCAAGGAACTTGTGGTTTGCAATGAAATGAAATCTAGGGTTGCTTATGTGTCGGAGTGA

mRNA sequence

ATGCTCTGGACAAGCCCTGTTCTGTTTTTCATACTCTTTCTCTTTGGAGCTTGGCAATTCTTTGCAAAGAAGAAGGAGGCACTCACTTCATGGGGGCCAGACGACCCTTTTACTGCTACTTCACCTACTACTGGAGCCCCACTGGTAACTGGATCCAGCGAGCGAGCATCTTTCATAGACACTCCTTCAAGAAGTACTGATATGATGGATCTCAGAGGTGGCAGCGGCCTAAGAGGACCACCGCGGCGTTATGGTTCTCCTACAGGGTATCCTAGTGGCGCAACAAGTTCCTTTAGGCCAGCTACAGCAAGTGACCATAACTCAAGACCAGCTGCAGTTGATCCAAATTATAGAGCAGCTTCGGAGCTAAAATTTAGGGGCTCGCCTTTAGAACCTCCAGGATTTCCAAAACGACGGGAGCCTCTTTTTGCAAACAATCAGGTGGTCAATCAGAGCTATGGGGACAGTAGTGAGGAGGAGCTTTCGGTTCTTCCTCGTCATACCAAGGTCGTCATTACTGGAAATAATCAAACCAAATTGGTCCTCGTTGGACTTCAAGGCGTCGTCAAGAAAGCCGTTGGCCTTGGTGGGTGGCATTGGCTGGTTCTAGCAAATGGCATGGCCGTGAAACTACAACGGAATGCGCTTATCGTAATCGAGGCTCCAACGGGGAACGAGGAAGACAAAAACCTCGAATTCGAGAACTTGAAATCGAATGGGTTGGATATGGCGGATCCTAGAGGAGAGCGAGCTAAAGGGATTAGGTCGTTCGACCCAATCCCATGTTTGGCCTCGACCGTGGGTCGAGGCCGACCACTCGGCCCACTCATGTGGGTCGAGTTTTCTCCCGTCCGTTCGGTTTCTGGTGCCTCTAGTCGTCCTGGTTCCACCTGGTTCAACCCGAATCGCCTTCGAACGCCTAAAAATCCTAGAGGAGGAACATGTTTACTGTTTTGCAGACCACGTCTTCCACCCAAGTCTGTTGAGTCCCTGTTTAATGTAACCTCTTCGGAGGATGGTCTTCAGTCTGTCCCGTCAGTGTCTGTTATCATTTCTGAAGTCGAGTCGGCCCTGGAGGCCAGAGAGTCTGTAATCAAGGAACTTGTGGTTTGCAATGAAATGAAATCTAGGGTTGCTTATGTGTCGGAGTGA

Coding sequence (CDS)

ATGCTCTGGACAAGCCCTGTTCTGTTTTTCATACTCTTTCTCTTTGGAGCTTGGCAATTCTTTGCAAAGAAGAAGGAGGCACTCACTTCATGGGGGCCAGACGACCCTTTTACTGCTACTTCACCTACTACTGGAGCCCCACTGGTAACTGGATCCAGCGAGCGAGCATCTTTCATAGACACTCCTTCAAGAAGTACTGATATGATGGATCTCAGAGGTGGCAGCGGCCTAAGAGGACCACCGCGGCGTTATGGTTCTCCTACAGGGTATCCTAGTGGCGCAACAAGTTCCTTTAGGCCAGCTACAGCAAGTGACCATAACTCAAGACCAGCTGCAGTTGATCCAAATTATAGAGCAGCTTCGGAGCTAAAATTTAGGGGCTCGCCTTTAGAACCTCCAGGATTTCCAAAACGACGGGAGCCTCTTTTTGCAAACAATCAGGTGGTCAATCAGAGCTATGGGGACAGTAGTGAGGAGGAGCTTTCGGTTCTTCCTCGTCATACCAAGGTCGTCATTACTGGAAATAATCAAACCAAATTGGTCCTCGTTGGACTTCAAGGCGTCGTCAAGAAAGCCGTTGGCCTTGGTGGGTGGCATTGGCTGGTTCTAGCAAATGGCATGGCCGTGAAACTACAACGGAATGCGCTTATCGTAATCGAGGCTCCAACGGGGAACGAGGAAGACAAAAACCTCGAATTCGAGAACTTGAAATCGAATGGGTTGGATATGGCGGATCCTAGAGGAGAGCGAGCTAAAGGGATTAGGTCGTTCGACCCAATCCCATGTTTGGCCTCGACCGTGGGTCGAGGCCGACCACTCGGCCCACTCATGTGGGTCGAGTTTTCTCCCGTCCGTTCGGTTTCTGGTGCCTCTAGTCGTCCTGGTTCCACCTGGTTCAACCCGAATCGCCTTCGAACGCCTAAAAATCCTAGAGGAGGAACATGTTTACTGTTTTGCAGACCACGTCTTCCACCCAAGTCTGTTGAGTCCCTGTTTAATGTAACCTCTTCGGAGGATGGTCTTCAGTCTGTCCCGTCAGTGTCTGTTATCATTTCTGAAGTCGAGTCGGCCCTGGAGGCCAGAGAGTCTGTAATCAAGGAACTTGTGGTTTGCAATGAAATGAAATCTAGGGTTGCTTATGTGTCGGAGTGA

Protein sequence

MLWTSPVLFFILFLFGAWQFFAKKKEALTSWGPDDPFTATSPTTGAPLVTGSSERASFIDTPSRSTDMMDLRGGSGLRGPPRRYGSPTGYPSGATSSFRPATASDHNSRPAAVDPNYRAASELKFRGSPLEPPGFPKRREPLFANNQVVNQSYGDSSEEELSVLPRHTKVVITGNNQTKLVLVGLQGVVKKAVGLGGWHWLVLANGMAVKLQRNALIVIEAPTGNEEDKNLEFENLKSNGLDMADPRGERAKGIRSFDPIPCLASTVGRGRPLGPLMWVEFSPVRSVSGASSRPGSTWFNPNRLRTPKNPRGGTCLLFCRPRLPPKSVESLFNVTSSEDGLQSVPSVSVIISEVESALEARESVIKELVVCNEMKSRVAYVSE

Homology

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BLAST of Lag0004354 vs. NCBI nr
Match: XP_008444699.1 (PREDICTED: uncharacterized membrane protein At1g75140-like [Cucumis melo])

HSP 1 Score: 290.4 bits (742), Expect = 2.2e-74
Identity = 144/157 (91.72%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 1   MLWTSPVLFFILFLFGAWQFFAKKKEALTSWGPDDPFTATSPTTGAPLVTGSSERASFID 60
           MLWTSPVLFFILFLFGAW FFAKKKEALTSWGPDDPFTATSPTTGAP+ TGSSERASFID
Sbjct: 497 MLWTSPVLFFILFLFGAWHFFAKKKEALTSWGPDDPFTATSPTTGAPMGTGSSERASFID 556

Query: 61  TPSRSTDMMDLRGGSGLRGPPRRYGSPTGYPSGATSSFRPATASDHNSRPAAVDPNYRAA 120
           TPSRSTD+MDLRGG GLRGP RRYGSPTGYP GATSSFRPAT SDH+SRPAAVDPNYRAA
Sbjct: 557 TPSRSTDVMDLRGGGGLRGPARRYGSPTGYPGGATSSFRPATTSDHSSRPAAVDPNYRAA 616

Query: 121 SELKFRGSPLEPPGFPKRREPLFANNQVVNQSYGDSS 158
           SELKFRGSPLEPPGFPKRREPLFANNQVVNQ   DS+
Sbjct: 617 SELKFRGSPLEPPGFPKRREPLFANNQVVNQVVDDSN 653

[Close]

BLAST of Lag0004354 vs. NCBI nr
Match: KAA0065248.1 (putative membrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 290.4 bits (742), Expect = 2.2e-74
Identity = 144/157 (91.72%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 1   MLWTSPVLFFILFLFGAWQFFAKKKEALTSWGPDDPFTATSPTTGAPLVTGSSERASFID 60
           MLWTSPVLFFILFLFGAW FFAKKKEALTSWGPDDPFTATSPTTGAP+ TGSSERASFID
Sbjct: 476 MLWTSPVLFFILFLFGAWHFFAKKKEALTSWGPDDPFTATSPTTGAPMGTGSSERASFID 535

Query: 61  TPSRSTDMMDLRGGSGLRGPPRRYGSPTGYPSGATSSFRPATASDHNSRPAAVDPNYRAA 120
           TPSRSTD+MDLRGG GLRGP RRYGSPTGYP GATSSFRPAT SDH+SRPAAVDPNYRAA
Sbjct: 536 TPSRSTDVMDLRGGGGLRGPARRYGSPTGYPGGATSSFRPATTSDHSSRPAAVDPNYRAA 595

Query: 121 SELKFRGSPLEPPGFPKRREPLFANNQVVNQSYGDSS 158
           SELKFRGSPLEPPGFPKRREPLFANNQVVNQ   DS+
Sbjct: 596 SELKFRGSPLEPPGFPKRREPLFANNQVVNQVVDDSN 632

[Close]

BLAST of Lag0004354 vs. NCBI nr
Match: XP_038885478.1 (uncharacterized membrane protein At1g75140-like [Benincasa hispida])

HSP 1 Score: 289.7 bits (740), Expect = 3.8e-74
Identity = 143/157 (91.08%), Postives = 147/157 (93.63%), Query Frame = 0


Query: 1   MLWTSPVLFFILFLFGAWQFFAKKKEALTSWGPDDPFTATSPTTGAPLVTGSSERASFID 60
           MLWTSPVLFFILFLFGAWQFFAKKKEALTSWGPDDPFTATSPTTG PL TGSSERASFID
Sbjct: 500 MLWTSPVLFFILFLFGAWQFFAKKKEALTSWGPDDPFTATSPTTGVPLGTGSSERASFID 559

Query: 61  TPSRSTDMMDLRGGSGLRGPPRRYGSPTGYPSGATSSFRPATASDHNSRPAAVDPNYRAA 120
           TPSRSTDMMDLRGG G+RGPPR YGSPTGYP GATSSFRP T SDH+SRPAAVDP+YRAA
Sbjct: 560 TPSRSTDMMDLRGGGGIRGPPRHYGSPTGYPGGATSSFRPPTTSDHSSRPAAVDPSYRAA 619

Query: 121 SELKFRGSPLEPPGFPKRREPLFANNQVVNQSYGDSS 158
           SELKFRGSPLEPPGFPKRREPLFANNQVVNQ   +SS
Sbjct: 620 SELKFRGSPLEPPGFPKRREPLFANNQVVNQMVDESS 656

[Close]

BLAST of Lag0004354 vs. NCBI nr
Match: XP_022951526.1 (uncharacterized membrane protein At1g75140-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 289.3 bits (739), Expect = 5.0e-74
Identity = 146/158 (92.41%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MLWTSPVLFFILFLFGAWQFFAKKKEALTSWGPDDPFTATSPTTGAPLVTGSSERASFID 60
           +LWTSPVLFFILFLFGAW FFAKKKEALTSWGPDDPFTATSPTTGAPL TGSSERASFID
Sbjct: 477 VLWTSPVLFFILFLFGAWHFFAKKKEALTSWGPDDPFTATSPTTGAPLGTGSSERASFID 536

Query: 61  TPSRSTDMMDLR-GGSGLRGPPRRYGSPTGYPSGATSSFRPATASDHNSRPAAVDPNYRA 120
            PSRSTDMMDLR GG GLRGPPRRYGSPTGYP GATSSFRPAT SDHNSRPAAVDPNYRA
Sbjct: 537 APSRSTDMMDLRGGGGGLRGPPRRYGSPTGYPGGATSSFRPATTSDHNSRPAAVDPNYRA 596

Query: 121 ASELKFRGSPLEPPGFPKRREPLFANNQVVNQSYGDSS 158
           ASELKFRGSPLEPPGFPKRREPLFANNQVVNQ   +SS
Sbjct: 597 ASELKFRGSPLEPPGFPKRREPLFANNQVVNQVVDESS 634

[Close]

BLAST of Lag0004354 vs. NCBI nr
Match: XP_023537555.1 (uncharacterized membrane protein At1g75140 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 289.3 bits (739), Expect = 5.0e-74
Identity = 146/158 (92.41%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MLWTSPVLFFILFLFGAWQFFAKKKEALTSWGPDDPFTATSPTTGAPLVTGSSERASFID 60
           +LWTSPVLFFILFLFGAW FFAKKKEALTSWGPDDPFTATSPTTGAPL TGSSERASFID
Sbjct: 395 VLWTSPVLFFILFLFGAWHFFAKKKEALTSWGPDDPFTATSPTTGAPLGTGSSERASFID 454

Query: 61  TPSRSTDMMDLR-GGSGLRGPPRRYGSPTGYPSGATSSFRPATASDHNSRPAAVDPNYRA 120
            PSRSTDMMDLR GG GLRGPPRRYGSPTGYP GATSSFRPAT SDHNSRPAAVDPNYRA
Sbjct: 455 APSRSTDMMDLRGGGGGLRGPPRRYGSPTGYPGGATSSFRPATTSDHNSRPAAVDPNYRA 514

Query: 121 ASELKFRGSPLEPPGFPKRREPLFANNQVVNQSYGDSS 158
           ASELKFRGSPLEPPGFPKRREPLFANNQVVNQ   +SS
Sbjct: 515 ASELKFRGSPLEPPGFPKRREPLFANNQVVNQVVDESS 552

[Close]

BLAST of Lag0004354 vs. ExPASy Swiss-Prot
Match: Q9FRK5 (Uncharacterized membrane protein At1g75140 OS=Arabidopsis thaliana OX=3702 GN=At1g75140 PE=1 SV=3)

HSP 1 Score: 126.7 bits (317), Expect = 5.6e-28
Identity = 75/153 (49.02%), Postives = 100/153 (65.36%), Query Frame = 0


Query: 1   MLWTSPVLFFILFLFGAWQFFAKKKEALTSWGPDDPFTATSPTTGAPLVTGSSERASFID 60
           MLW+SPV FFILFLFGAW FF+KKKE+LT+WGPDDPF++T  T  +   T +   ++F +
Sbjct: 473 MLWSSPVFFFILFLFGAWHFFSKKKESLTAWGPDDPFSST--TMSSSSTTTAQNSSAFSE 532

Query: 61  TPSRSTDMMDLRGGSGLRGPPRRYGSPTGYPSG-ATSSFRPATASDHNSRPAAVDPNYR- 120
           +  R+ D MDLR         RRY SP+ YP G AT ++R   ++D +SR      NYR 
Sbjct: 533 STRRNDDHMDLR---------RRYVSPSRYPPGAATGAYRSVGSNDPSSRAPVETTNYRT 592

Query: 121 AASELKFR-GSPLEPPGFPKRREPLFANNQVVN 151
            A E+K+R GS L+  GF KRRE LF NN+ ++
Sbjct: 593 TAQEMKYRGGSGLDSGGFGKRRESLFGNNKALD 614

[Close]

BLAST of Lag0004354 vs. ExPASy TrEMBL
Match: A0A5A7VC92 (Putative membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005890 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.1e-74
Identity = 144/157 (91.72%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 1   MLWTSPVLFFILFLFGAWQFFAKKKEALTSWGPDDPFTATSPTTGAPLVTGSSERASFID 60
           MLWTSPVLFFILFLFGAW FFAKKKEALTSWGPDDPFTATSPTTGAP+ TGSSERASFID
Sbjct: 476 MLWTSPVLFFILFLFGAWHFFAKKKEALTSWGPDDPFTATSPTTGAPMGTGSSERASFID 535

Query: 61  TPSRSTDMMDLRGGSGLRGPPRRYGSPTGYPSGATSSFRPATASDHNSRPAAVDPNYRAA 120
           TPSRSTD+MDLRGG GLRGP RRYGSPTGYP GATSSFRPAT SDH+SRPAAVDPNYRAA
Sbjct: 536 TPSRSTDVMDLRGGGGLRGPARRYGSPTGYPGGATSSFRPATTSDHSSRPAAVDPNYRAA 595

Query: 121 SELKFRGSPLEPPGFPKRREPLFANNQVVNQSYGDSS 158
           SELKFRGSPLEPPGFPKRREPLFANNQVVNQ   DS+
Sbjct: 596 SELKFRGSPLEPPGFPKRREPLFANNQVVNQVVDDSN 632

[Close]

BLAST of Lag0004354 vs. ExPASy TrEMBL
Match: A0A1S3BAX2 (uncharacterized membrane protein At1g75140-like OS=Cucumis melo OX=3656 GN=LOC103487958 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.1e-74
Identity = 144/157 (91.72%), Postives = 148/157 (94.27%), Query Frame = 0


Query: 1   MLWTSPVLFFILFLFGAWQFFAKKKEALTSWGPDDPFTATSPTTGAPLVTGSSERASFID 60
           MLWTSPVLFFILFLFGAW FFAKKKEALTSWGPDDPFTATSPTTGAP+ TGSSERASFID
Sbjct: 497 MLWTSPVLFFILFLFGAWHFFAKKKEALTSWGPDDPFTATSPTTGAPMGTGSSERASFID 556

Query: 61  TPSRSTDMMDLRGGSGLRGPPRRYGSPTGYPSGATSSFRPATASDHNSRPAAVDPNYRAA 120
           TPSRSTD+MDLRGG GLRGP RRYGSPTGYP GATSSFRPAT SDH+SRPAAVDPNYRAA
Sbjct: 557 TPSRSTDVMDLRGGGGLRGPARRYGSPTGYPGGATSSFRPATTSDHSSRPAAVDPNYRAA 616

Query: 121 SELKFRGSPLEPPGFPKRREPLFANNQVVNQSYGDSS 158
           SELKFRGSPLEPPGFPKRREPLFANNQVVNQ   DS+
Sbjct: 617 SELKFRGSPLEPPGFPKRREPLFANNQVVNQVVDDSN 653

[Close]

BLAST of Lag0004354 vs. ExPASy TrEMBL
Match: A0A6J1CSU7 (uncharacterized membrane protein At1g75140-like OS=Momordica charantia OX=3673 GN=LOC111013986 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 2.4e-74
Identity = 142/152 (93.42%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 1   MLWTSPVLFFILFLFGAWQFFAKKKEALTSWGPDDPFTATSPTTGAPLVTGSSERASFID 60
           MLWTSPVLFFILFLFGAW FFAKKKEALTSWGPDDPFTATSPTTGAPL TG+SER+SFID
Sbjct: 501 MLWTSPVLFFILFLFGAWHFFAKKKEALTSWGPDDPFTATSPTTGAPLGTGTSERSSFID 560

Query: 61  TPSRSTDMMDLRGGSGLRGPPRRYGSPTGYPSGATSSFRPATASDHNSRPAAVDPNYRAA 120
           TPSRSTDMMDLRGGSGLRGPPRRYGSPTGYP GAT+SFRP T SDHNSRPAAVDPNYRAA
Sbjct: 561 TPSRSTDMMDLRGGSGLRGPPRRYGSPTGYPGGATNSFRPPTTSDHNSRPAAVDPNYRAA 620

Query: 121 SELKFRGSPLEPPGFPKRREPLFANNQVVNQS 153
           SELKFRGSPLEPPGFPKRREPLFANNQVV++S
Sbjct: 621 SELKFRGSPLEPPGFPKRREPLFANNQVVDES 652

[Close]

BLAST of Lag0004354 vs. ExPASy TrEMBL
Match: A0A6J1GHT9 (uncharacterized membrane protein At1g75140-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454317 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 2.4e-74
Identity = 146/158 (92.41%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MLWTSPVLFFILFLFGAWQFFAKKKEALTSWGPDDPFTATSPTTGAPLVTGSSERASFID 60
           +LWTSPVLFFILFLFGAW FFAKKKEALTSWGPDDPFTATSPTTGAPL TGSSERASFID
Sbjct: 477 VLWTSPVLFFILFLFGAWHFFAKKKEALTSWGPDDPFTATSPTTGAPLGTGSSERASFID 536

Query: 61  TPSRSTDMMDLR-GGSGLRGPPRRYGSPTGYPSGATSSFRPATASDHNSRPAAVDPNYRA 120
            PSRSTDMMDLR GG GLRGPPRRYGSPTGYP GATSSFRPAT SDHNSRPAAVDPNYRA
Sbjct: 537 APSRSTDMMDLRGGGGGLRGPPRRYGSPTGYPGGATSSFRPATTSDHNSRPAAVDPNYRA 596

Query: 121 ASELKFRGSPLEPPGFPKRREPLFANNQVVNQSYGDSS 158
           ASELKFRGSPLEPPGFPKRREPLFANNQVVNQ   +SS
Sbjct: 597 ASELKFRGSPLEPPGFPKRREPLFANNQVVNQVVDESS 634

[Close]

BLAST of Lag0004354 vs. ExPASy TrEMBL
Match: A0A6J1GHX7 (uncharacterized membrane protein At1g75140-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454317 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 2.4e-74
Identity = 146/158 (92.41%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MLWTSPVLFFILFLFGAWQFFAKKKEALTSWGPDDPFTATSPTTGAPLVTGSSERASFID 60
           +LWTSPVLFFILFLFGAW FFAKKKEALTSWGPDDPFTATSPTTGAPL TGSSERASFID
Sbjct: 395 VLWTSPVLFFILFLFGAWHFFAKKKEALTSWGPDDPFTATSPTTGAPLGTGSSERASFID 454

Query: 61  TPSRSTDMMDLR-GGSGLRGPPRRYGSPTGYPSGATSSFRPATASDHNSRPAAVDPNYRA 120
            PSRSTDMMDLR GG GLRGPPRRYGSPTGYP GATSSFRPAT SDHNSRPAAVDPNYRA
Sbjct: 455 APSRSTDMMDLRGGGGGLRGPPRRYGSPTGYPGGATSSFRPATTSDHNSRPAAVDPNYRA 514

Query: 121 ASELKFRGSPLEPPGFPKRREPLFANNQVVNQSYGDSS 158
           ASELKFRGSPLEPPGFPKRREPLFANNQVVNQ   +SS
Sbjct: 515 ASELKFRGSPLEPPGFPKRREPLFANNQVVNQVVDESS 552

[Close]

BLAST of Lag0004354 vs. TAIR 10
Match: AT1G19330.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1); Has 145 Blast hits to 145 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 152.1 bits (383), Expect = 8.8e-37
Identity = 79/114 (69.30%), Postives = 89/114 (78.07%), Query Frame = 0


Query: 149 VNQSYGD-SSEEELSVLPRHTKVVITGNNQTKLVLVGLQGVVKKAVGLGGWHWLVLANGM 208
           +   YGD SSEEELSVLPRHTKVV+TGNN+TK VLVGLQGVVKKAVGLGGWHWLVL NG+
Sbjct: 18  IQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGI 77

Query: 209 AVKLQRNALIVIEAPTGNEEDKNLEFENLKSNGLDMAD-----PRGERAKGIRS 257
            VKLQRNAL V+E PTGNEED +L+FEN + NG DM       P   + +G RS
Sbjct: 78  EVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDMTSEDTLKPHKSKLRGQRS 131

[Close]

BLAST of Lag0004354 vs. TAIR 10
Match: AT1G19330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1); Has 145 Blast hits to 145 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 40; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 150.6 bits (379), Expect = 2.6e-36
Identity = 75/96 (78.12%), Postives = 83/96 (86.46%), Query Frame = 0


Query: 149 VNQSYGD-SSEEELSVLPRHTKVVITGNNQTKLVLVGLQGVVKKAVGLGGWHWLVLANGM 208
           +   YGD SSEEELSVLPRHTKVV+TGNN+TK VLVGLQGVVKKAVGLGGWHWLVL NG+
Sbjct: 18  IQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGI 77

Query: 209 AVKLQRNALIVIEAPTGNEEDKNLEFENLKSNGLDM 244
            VKLQRNAL V+E PTGNEED +L+FEN + NG DM
Sbjct: 78  EVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDM 113

[Close]

BLAST of Lag0004354 vs. TAIR 10
Match: AT1G19330.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75060.1). )

HSP 1 Score: 150.6 bits (379), Expect = 2.6e-36
Identity = 75/96 (78.12%), Postives = 83/96 (86.46%), Query Frame = 0


Query: 149 VNQSYGD-SSEEELSVLPRHTKVVITGNNQTKLVLVGLQGVVKKAVGLGGWHWLVLANGM 208
           +   YGD SSEEELSVLPRHTKVV+TGNN+TK VLVGLQGVVKKAVGLGGWHWLVL NG+
Sbjct: 18  IQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGI 77

Query: 209 AVKLQRNALIVIEAPTGNEEDKNLEFENLKSNGLDM 244
            VKLQRNAL V+E PTGNEED +L+FEN + NG DM
Sbjct: 78  EVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDM 113

[Close]

BLAST of Lag0004354 vs. TAIR 10
Match: AT1G75060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19330.2); Has 104 Blast hits to 104 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 136.0 bits (341), Expect = 6.5e-32
Identity = 68/84 (80.95%), Postives = 76/84 (90.48%), Query Frame = 0


Query: 153 YGD-SSEEELSVLPRHTKVVITGNNQTKLVLVGLQGVVKKAVGLGGWHWLVLANGMAVKL 212
           +GD SSEEELSVLPRHTKVV+TGNN+TK VLVGLQGVVKKAVGLGGWHWLVL NG+ VKL
Sbjct: 26  FGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKL 85

Query: 213 QRNALIVIEAPTGNEEDKNLEFEN 236
           QRNAL V+E PTGNEED +LE ++
Sbjct: 86  QRNALSVLEHPTGNEEDNDLEVDH 109

[Close]

BLAST of Lag0004354 vs. TAIR 10
Match: AT1G75060.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19330.2); Has 104 Blast hits to 104 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 136.0 bits (341), Expect = 6.5e-32
Identity = 68/84 (80.95%), Postives = 76/84 (90.48%), Query Frame = 0


Query: 153 YGD-SSEEELSVLPRHTKVVITGNNQTKLVLVGLQGVVKKAVGLGGWHWLVLANGMAVKL 212
           +GD SSEEELSVLPRHTKVV+TGNN+TK VLVGLQGVVKKAVGLGGWHWLVL NG+ VKL
Sbjct: 26  FGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKL 85

Query: 213 QRNALIVIEAPTGNEEDKNLEFEN 236
           QRNAL V+E PTGNEED +LE ++
Sbjct: 86  QRNALSVLEHPTGNEEDNDLEVDH 109

The following BLAST results are available for this feature:

BLAST of Lag0004354 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444699.1	2.2e-74	91.72	PREDICTED: uncharacterized membrane protein At1g75140-like [Cucumis melo]	[more]
KAA0065248.1	2.2e-74	91.72	putative membrane protein [Cucumis melo var. makuwa]	[more]
XP_038885478.1	3.8e-74	91.08	uncharacterized membrane protein At1g75140-like [Benincasa hispida]	[more]
XP_022951526.1	5.0e-74	92.41	uncharacterized membrane protein At1g75140-like isoform X1 [Cucurbita moschata]	[more]
XP_023537555.1	5.0e-74	92.41	uncharacterized membrane protein At1g75140 isoform X2 [Cucurbita pepo subsp. pep...	[more]

BLAST of Lag0004354 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FRK5	5.6e-28	49.02	Uncharacterized membrane protein At1g75140 OS=Arabidopsis thaliana OX=3702 GN=At...	[more]

BLAST of Lag0004354 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VC92	1.1e-74	91.72	Putative membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3BAX2	1.1e-74	91.72	uncharacterized membrane protein At1g75140-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1CSU7	2.4e-74	93.42	uncharacterized membrane protein At1g75140-like OS=Momordica charantia OX=3673 G...	[more]
A0A6J1GHT9	2.4e-74	92.41	uncharacterized membrane protein At1g75140-like isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1GHX7	2.4e-74	92.41	uncharacterized membrane protein At1g75140-like isoform X2 OS=Cucurbita moschata...	[more]

BLAST of Lag0004354 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19330.2	8.8e-37	69.30	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G19330.1	2.6e-36	78.13	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G19330.3	2.6e-36	78.13	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G75060.1	6.5e-32	80.95	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G75060.2	6.5e-32	80.95	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..104
None	No IPR available	PANTHER	PTHR35464:SF1	OS06G0115200 PROTEIN	coord: 1..151
None	No IPR available	PANTHER	PTHR35464	OS06G0115200 PROTEIN	coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0004354.1	Lag0004354.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane