Lag0004340 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0004340
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr6: 3084393 .. 3085591 (-)
RNA-Seq ExpressionLag0004340
SyntenyLag0004340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATCGAGACCGTCCTTTATATGGAGGAGTTTGTTGTGGGGGAGAGAGTTGCTAGAAAGGGGCTTGCGTTGGCGGGTTGGGAGTGGGGAAAGTGTGCCGGTATATGGAGTGAATTGGCTCCCTGAGGATGGTAATTTCAGGGTGCGATCACCAGTGACATTGGCGCCGGAGACTCGGGTTGCGGATCTGATGACGGCATCGGGGCAGTGGAACGAAGGGCTCATTCGGCAGCACTTTAGGCCTCATGAGGTCAGTCTGATTTTGTCAATTCCGGTACGGGCTGGGGCGGAGGATAGGATTGTTTGGCATTATGAGAAGTCAGGCCTGTTTTCGGTGAAAAGCGGATATCGGTTGGGTCAATCAGCCTGGCTTGCACAACTTCCGTCTTCCTCTTCGAACGAGTCGGGAATGGGTTGGTGGAAGGGGGTTTGGAAAATGTCTATCCCGAATAAGATCAAATTTTTTCTTCGGAGACTTTGTTTAGACCGCTTGCCCACGATTGATAACTTGGGTATTCGGGGTTGTGACGTTTTGAATGTTTGTGTCCTATGTAGGCGAGCTGGGGAGTCTAGTATGCATGTCTTCTGGCATTGCAAGTTCTTCAAGGCGGTGTTGATGGAGTCTGAGTTTGGAAGCTTGATACATAATGTGCAGGCTGGGTCTATGTTTGATCTCCTTAGAGAAGTGAGGGACAAGATTGGTTGGGGAAGATTTGAGTTGTTTGTGGTGGTGTTGTGGGCTGTGTGGAACTGTCGAAATCAGCAGAAATTTAGGGGCTAGAACCAGTGGTGGGACTAGTGGAGTGGGCGGCGAGTTATATCTCGTCGTTCCAGCGGGCGACCTCGGCTTGTGGAGTTGGGTTGCAGAGTGTCCATGCAAGGGAAGATGTTAGATGGAGCCCCCCGGAGGCTGGGTGGTATAAGGTGAACGTAGATGCGTCCTTTAGGAGGGAGCGATGGCAGGCGGGTCTGGGAGTGGTGGTTCGAGATTCCTCGGGTCGGGTTATGCTGTCGGCATCCTTGGTGCAGCGGCATGTGCGAAGCCCGGAGATGGCTGAAGGATGGGCTGCGGTCAAGGGGCGAGACTGGCAGTGGAGATGGGTCTGTGCCCATTGGTGTTGGAGACTGACTCTAGTCGGGTGGCTAGTTTTTTCCAAGATGAGGCTGGGGATGACTTCTCGGATGTGGGTGGCCTAG

mRNA sequence

ATGGGATCGAGACCGTCCTTTATATGGAGGAGTTTGTTGTGGGGGAGAGAGTTGCTAGAAAGGGGCTTGCGTTGGCGGGTTGGGAGTGGGGAAAGTGTGCCGGTATATGGAGTGAATTGGCTCCCTGAGGATGGTAATTTCAGGGTGCGATCACCAGTGACATTGGCGCCGGAGACTCGGGTTGCGGATCTGATGACGGCATCGGGGCAGTGGAACGAAGGGCTCATTCGGCAGCACTTTAGGCCTCATGAGGTCAGTCTGATTTTGTCAATTCCGGTACGGGCTGGGGCGGAGGATAGGATTGTTTGGCATTATGAGAAGTCAGGCCTGTTTTCGGTGAAAAGCGGATATCGGTTGGGTCAATCAGCCTGGCTTGCACAACTTCCGTCTTCCTCTTCGAACGAGTCGGGAATGGGTTGGTGGAAGGGGGTTTGGAAAATGTCTATCCCGAATAAGATCAAATTTTTTCTTCGGAGACTTTGTTTAGACCGCTTGCCCACGATTGATAACTTGGGTATTCGGGGTTGTGACGTTTTGAATGTTTGTGTCCTATGTAGGCGAGCTGGGGAGTCTAGTATGCATGTCTTCTGGCATTGCAAGTTCTTCAAGGCGGTGTTGATGGAGTCTGAGTTTGGAAGCTTGATACATAATGTGCAGGCTGGGTCTATGTTTGATCTCCTTAGAGAAGGGCTAGAACCAGTGGTGGGACTAGTGGAGTGGGCGGCGAGTTATATCTCGTCGTTCCAGCGGGCGACCTCGGCTTGTGGAGTTGGGTTGCAGAGTGTCCATGCAAGGGAAGATGTTAGATGGAGCCCCCCGGAGGCTGGGTGGTATAAGGTGAACGTAGATGCGTCCTTTAGGAGGGAGCGATGGCAGGCGGGTCTGGGAGTGGTGGTTCGAGATTCCTCGGGTCGGGTTATGCTGTCGGCATCCTTGGTGCAGCGGCATGTGCGAAGCCCGGAGATGGCTGAAGGATGGGCTGCGGTCAAGGGGCGAGACTGGCAGTGGAGATGGGTCTGTGCCCATTGGTGTTGGAGACTGACTCTAGTCGGGTGGCTAGTTTTTTCCAAGATGAGGCTGGGGATGACTTCTCGGATGTGGGTGGCCTAG

Coding sequence (CDS)

ATGGGATCGAGACCGTCCTTTATATGGAGGAGTTTGTTGTGGGGGAGAGAGTTGCTAGAAAGGGGCTTGCGTTGGCGGGTTGGGAGTGGGGAAAGTGTGCCGGTATATGGAGTGAATTGGCTCCCTGAGGATGGTAATTTCAGGGTGCGATCACCAGTGACATTGGCGCCGGAGACTCGGGTTGCGGATCTGATGACGGCATCGGGGCAGTGGAACGAAGGGCTCATTCGGCAGCACTTTAGGCCTCATGAGGTCAGTCTGATTTTGTCAATTCCGGTACGGGCTGGGGCGGAGGATAGGATTGTTTGGCATTATGAGAAGTCAGGCCTGTTTTCGGTGAAAAGCGGATATCGGTTGGGTCAATCAGCCTGGCTTGCACAACTTCCGTCTTCCTCTTCGAACGAGTCGGGAATGGGTTGGTGGAAGGGGGTTTGGAAAATGTCTATCCCGAATAAGATCAAATTTTTTCTTCGGAGACTTTGTTTAGACCGCTTGCCCACGATTGATAACTTGGGTATTCGGGGTTGTGACGTTTTGAATGTTTGTGTCCTATGTAGGCGAGCTGGGGAGTCTAGTATGCATGTCTTCTGGCATTGCAAGTTCTTCAAGGCGGTGTTGATGGAGTCTGAGTTTGGAAGCTTGATACATAATGTGCAGGCTGGGTCTATGTTTGATCTCCTTAGAGAAGGGCTAGAACCAGTGGTGGGACTAGTGGAGTGGGCGGCGAGTTATATCTCGTCGTTCCAGCGGGCGACCTCGGCTTGTGGAGTTGGGTTGCAGAGTGTCCATGCAAGGGAAGATGTTAGATGGAGCCCCCCGGAGGCTGGGTGGTATAAGGTGAACGTAGATGCGTCCTTTAGGAGGGAGCGATGGCAGGCGGGTCTGGGAGTGGTGGTTCGAGATTCCTCGGGTCGGGTTATGCTGTCGGCATCCTTGGTGCAGCGGCATGTGCGAAGCCCGGAGATGGCTGAAGGATGGGCTGCGGTCAAGGGGCGAGACTGGCAGTGGAGATGGGTCTGTGCCCATTGGTGTTGGAGACTGACTCTAGTCGGGTGGCTAGTTTTTTCCAAGATGAGGCTGGGGATGACTTCTCGGATGTGGGTGGCCTAG

Protein sequence

MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLILSIPVRAGAEDRIVWHYEKSGLFSVKSGYRLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHCKFFKAVLMESEFGSLIHNVQAGSMFDLLREGLEPVVGLVEWAASYISSFQRATSACGVGLQSVHAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGRDWQWRWVCAHWCWRLTLVGWLVFSKMRLGMTSRMWVA
Homology
BLAST of Lag0004340 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 287.3 bits (734), Expect = 1.8e-73
Identity = 153/369 (41.46%), Postives = 211/369 (57.18%), Query Frame = 0

Query: 1    MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETR 60
            +   PS+IWRS+LWGR+LL++GLRWR+G+G+SV +YG NW+P     ++ S   L   +R
Sbjct: 693  ISGNPSYIWRSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSR 752

Query: 61   VADLMT-ASGQWNEGLIRQHFRPHEVSLILSIPVRAGA-EDRIVWHYEKSGLFSVKSGYR 120
            V+ L+    G W   ++R  F P E   ILSIP+  GA EDR++W+YEK+G++SV+SGY+
Sbjct: 753  VSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYK 812

Query: 121  LG-QSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCD 180
            +   +    Q PSSSS+E    WW G WKM IPNKIK FL RLCLDRLPT  NL  RG +
Sbjct: 813  VALLNNPCVQAPSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVE 872

Query: 181  VLNVCVLCRRAGESSMHVFWHCKFFKAVLMESEFGSLIHNVQAGSMFDLLREGLEPV--- 240
            + N C  C R GE S+H+FW CKF +A+ + S+FG L       S F +LRE  E +   
Sbjct: 873  ITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKL-------SPFLILRESHESLSKA 932

Query: 241  --------------------------------VGLVEWAASYISSFQRATSACGVGLQSV 300
                                            + LVEWA  Y   F+ A S    G   V
Sbjct: 933  DFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFREAKSNPITG--RV 992

Query: 301  HAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEM 332
                ++ W PP+ G YK+N DASF      AGLG+++ +  G+VM +A+    +++S +M
Sbjct: 993  TNTAEILWQPPDEGIYKINTDASFLASDQHAGLGIIIHNDRGQVMAAATKYLENIQSVDM 1052

BLAST of Lag0004340 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])

HSP 1 Score: 224.6 bits (571), Expect = 1.4e-54
Identity = 124/359 (34.54%), Postives = 184/359 (51.25%), Query Frame = 0

Query: 1    MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETR 60
            +GS+PSF+WRS++WGR++L +G RWR+G+G++V VYG NW+P    F+  S  ++  +T 
Sbjct: 699  LGSKPSFVWRSIVWGRQVLHKGARWRIGNGQNVLVYGNNWIPRPTTFKPISAPSMGTDTT 758

Query: 61   VADLMTASGQWNEGLIRQHFRPHEVSLILSIPV-RAGAEDRIVWHYEKSGLFSVKSGYRL 120
            VA+L+    QW E LI QHFRP +   I+ IP+ +   ED+++WHY+K G +SVKSGY++
Sbjct: 759  VAELIDEKQQWREDLILQHFRPEDAEAIMQIPLPKRPKEDQLIWHYDKKGYYSVKSGYQV 818

Query: 121  GQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVL 180
                   + PS S+++  +  W+ +WK++IP K+K FL R   D LPT +NL  +     
Sbjct: 819  AMRIKFPEDPSCSNHDQNL--WRFIWKLAIPEKVKIFLWRAAHDLLPTAENLWKKKVLQE 878

Query: 181  NVCVLCRRAGESSMHVFWHCKFFKAVLMESEFGSLIHNVQAGSMFDLLR---------EG 240
             +C  C    E+  H    C   + +   S     +  V    +  +L+         EG
Sbjct: 879  PMCQSCHCHVETVSHALVECNRARKIWRYSNLAEELRGVYRCDIVWMLQFWPRQHAKVEG 938

Query: 241  LEPV----------------------VGLVEWAASYISSFQRATSACGVGLQSVHAREDV 300
             E                        + +V  A + + SF++      V     +A    
Sbjct: 939  AEVAALLWAIWKARNKWLFEGKKENPLRVVANAEAIVESFKKIRQPEMVYKTKGNAERQK 998

Query: 301  RWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWA 328
            +WSPP  GW KVNVDA+   E   AGLGVVVRDS G    +A    R   S  MAE  A
Sbjct: 999  QWSPPPNGWQKVNVDAAVDVENQMAGLGVVVRDSDGNCRAAAIKSLRLPGSVAMAEATA 1055

BLAST of Lag0004340 vs. NCBI nr
Match: VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis])

HSP 1 Score: 209.5 bits (532), Expect = 4.8e-50
Identity = 130/355 (36.62%), Postives = 178/355 (50.14%), Query Frame = 0

Query: 1    MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETR 60
            +G+ PSFIWRSL WG+ELL +GLRWRVG+G S+ VY   WLP    F++ SP  L   T 
Sbjct: 832  VGTNPSFIWRSLQWGKELLNKGLRWRVGNGVSIQVYTDKWLPAPSFFKIMSPPQLPLSTL 891

Query: 61   VADLMTASGQWNEGLIRQHFRPHEVSLILSIPVRA-GAEDRIVWHYEKSGLFSVKSGYRL 120
            V DL T+SGQWN  L++  F   EV   L IP+ +    D ++WHYE++G++SVKSGYRL
Sbjct: 892  VCDLFTSSGQWNVPLLKDIFWDQEVDAKLQIPLASLAGHDCLIWHYERNGMYSVKSGYRL 951

Query: 121  G--QSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCD 180
               +   ++  PS   + +   +WK +W + IPNKIKFFL R   D LP    L  R   
Sbjct: 952  ACLEKDKMSGEPSVRVDLNSK-FWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIA 1011

Query: 181  VLNVCVLCRRAGESSMHVFWHCKFFKAVLMESEFGS------------LIHNVQAGS--- 240
               +C  C R  ES +H  W C+  K V   S +G+            L H +Q  S   
Sbjct: 1012 PTPICPNCHRKAESVLHAVWLCETAKEVWRNSAWGNVCEEWRVNSFRELWHALQLSSSGE 1071

Query: 241  ---MFDLLREGL-------------EPVVGLVEWAASYISSFQRATSACGVGLQSVHARE 300
               +F  L  GL             E    L+         F  A +       ++H R+
Sbjct: 1072 EQGLFAYLCWGLWNRRNSFIFEGKSETATQLLHRMTKLAQEFSNANNLS----HTIHGRQ 1131

Query: 301  DV------RWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQR 316
                     W PP AG YK+NVD + +      G+GVVVR+++G  M  A+ V+R
Sbjct: 1132 SSPQAPLHGWRPPPAGIYKINVDGAVKSGDSVRGVGVVVRNANGEFM--AACVRR 1179

BLAST of Lag0004340 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-49
Identity = 115/364 (31.59%), Postives = 189/364 (51.92%), Query Frame = 0

Query: 2    GSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRV 61
            G+  S+IWRS++WGR+++++G+RWR+G+G+ + ++  NWLP    FR   P++L   + V
Sbjct: 936  GANASYIWRSIMWGRQVIKKGMRWRIGNGKKIAIFSDNWLPRPETFRPIFPLSLPVSSVV 995

Query: 62   ADLMTASGQWNEGLIRQHFRPHEVSLILSIPVRA-GAEDRIVWHYEKSGLFSVKSGYRLG 121
            ADL+ A  QW+E  +RQHF   + + IL IP+ A  AED ++WHY+K G +SVKSGY+L 
Sbjct: 996  ADLIKADNQWDEIKLRQHFLDVDTAEILKIPLPAEKAEDEVLWHYDKRGNYSVKSGYQL- 1055

Query: 122  QSAWLAQLPSSSS-NESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVL 181
              A  ++ P S+S  E+   +W  +W + +P K+K F+ R   + LP+ +NL  R     
Sbjct: 1056 --ALRSKFPDSTSCTEASHKYWSALWTLELPEKLKIFMWRASNNLLPSAENLWKRKVVEE 1115

Query: 182  NVCVLCRRAGESSMHVFWHCKFFKAVLMESEFGSLIHNVQAGSMF--------DLLREGL 241
              C  C+ + E+  H    CK  + + ++S F +      +  +F        +L +  L
Sbjct: 1116 PTCKRCKLSVETISHALLECKAARKIWLQSPFSAPRLEANSQDIFSTLQNMAKELRKSDL 1175

Query: 242  EPVVGLVEWAASY------------------------ISSFQRATSACGVGLQSVHARED 301
            E +V L  W+A Y                        +++FQR        +      + 
Sbjct: 1176 ELMVALC-WSAWYARNKCIFDGRELNPIISAAKAESVLTAFQRVRKPQQSHISISIKEKQ 1235

Query: 302  VRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWA 332
              W PP    +KVNVDA+F  +   AG+G V+RDS+G+++ +         S  +AE  A
Sbjct: 1236 QEWLPPPQNVFKVNVDAAFNSKNLSAGVGAVIRDSNGKIVAAGVNQNLLKGSASLAEAEA 1295

BLAST of Lag0004340 vs. NCBI nr
Match: XP_024041921.1 (uncharacterized protein LOC112099052 [Citrus clementina])

HSP 1 Score: 205.3 bits (521), Expect = 9.1e-49
Identity = 112/337 (33.23%), Postives = 172/337 (51.04%), Query Frame = 0

Query: 1   MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETR 60
           +GS+PSFIWRS+LWGR+++ +G RWRVG+G+S+ ++  NWLP    F+  +   L  +  
Sbjct: 580 LGSKPSFIWRSILWGRQVISKGSRWRVGNGQSIMIHKSNWLPRPSTFKPIARPNLPADAV 639

Query: 61  VADLMTASGQWNEGLIRQHFRPHEVSLILSIP-VRAGAEDRIVWHYEKSGLFSVKSGYRL 120
           V +L+     WN+ LI   F   + + I+ IP +R    D ++WHY K G FSVKSGYR+
Sbjct: 640 VVELIDVEHCWNKRLIYSVFDKMDAATIVRIPLLRRPMRDEVIWHYNKRGQFSVKSGYRV 699

Query: 121 GQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVL 180
             S  L   PSSS N +    WK +W +++P KI+ F+ R   + LP+ +NL  R     
Sbjct: 700 ALSLKLPATPSSSENPNSQ--WKFIWLLTLPEKIRIFVWRAVKNILPSAENLWKRKIIQE 759

Query: 181 NVCVLCRRAGESSMHVFWHCKFFKAVLMESEFGSLIHNVQAGSM--FDLLREGLEPVVGL 240
            +C L +   E+  H     K  K +   + F   +       +  F L          +
Sbjct: 760 PLCQLYKNGMETIFHALVGYKAAKKIWKTTRFAEDLKGSSDQDILSFLLALNSKRSKAEM 819

Query: 241 VEWAASYISSFQRATSACGVGLQSVHAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGV 300
              A + I ++QR        + +  +     W+PP+ G+ KVNVDA+   E+  +GLG 
Sbjct: 820 EHLAEAVIEAYQRTQKPAAAHIGNQRSLIRKAWNPPQRGYVKVNVDAATNSEKQLSGLGA 879

Query: 301 VVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGRDW 335
           V+RD +G V+ +A  V R       AE  A  +  DW
Sbjct: 880 VIRDENGNVIAAAIKVSRFYGEAAYAE--AEAEAIDW 912

BLAST of Lag0004340 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.1e-15
Identity = 87/379 (22.96%), Postives = 147/379 (38.79%), Query Frame = 0

Query: 6   SFIWRSLLWG-RELLERGLRWRVGSGESVPVYGVNW------LPEDGNFRVRSPVTLAPE 65
           S  WRS+  G R+++  G+ W  G G+ +  +   W      L  D   R     T+  +
Sbjct: 155 SSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKPLLELDNGERPTDCDTVVAK 214

Query: 66  TRVADLMTASGQWNEGLIRQHFRPH---EVSLILSIPVRAGAEDRIVWHYEKSGLFSVKS 125
               DL      W+   I  +   +   E+  ++ + +  GA DR+ W + + G FSV+S
Sbjct: 215 ----DLWIPGRGWDFAKIDPYTTNNTRLELRAVV-LDLVTGARDRLSWKFSQDGQFSVRS 274

Query: 126 GYRLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRG 185
            Y +     + ++P  +       ++  +WK+ +P ++K FL  +    + T +    R 
Sbjct: 275 AYEM---LTVDEVPRPNM----ASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRH 334

Query: 186 CDVLNVCVLCRRAGESSMHVFWHCK-----------------FFKAVLMESEFGSL---- 245
               NVC +C+   ES +HV   C                  FF   L E  + +L    
Sbjct: 335 LSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEWLYDNLGDRS 394

Query: 246 ---------IHNV--------QAGSMFDLLREGLEPVVGLVEWAASYISSFQRATSACGV 305
                    I  V        + G++F    +  + V  + EWA   +  ++  +    V
Sbjct: 395 GCEDIPWSTIFAVIIWWGWKWRCGNIFGENTKCRDRVKFVKEWA---VEVYRAHSGNVLV 454

Query: 306 GLQSVHAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHV 337
           G+        + W  P  GW KVN D + R     A  G V+RD +G      SL     
Sbjct: 455 GITQPRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGRC 514

BLAST of Lag0004340 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 5.4e-04
Identity = 19/44 (43.18%), Postives = 29/44 (65.91%), Query Frame = 0

Query: 1   MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPED 45
           +G+RPS+ WRS++ GRELL RGL   +G G    V+   W+ ++
Sbjct: 104 VGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWIMDE 147

BLAST of Lag0004340 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 8.8e-74
Identity = 153/369 (41.46%), Postives = 211/369 (57.18%), Query Frame = 0

Query: 1    MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETR 60
            +   PS+IWRS+LWGR+LL++GLRWR+G+G+SV +YG NW+P     ++ S   L   +R
Sbjct: 693  ISGNPSYIWRSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSR 752

Query: 61   VADLMT-ASGQWNEGLIRQHFRPHEVSLILSIPVRAGA-EDRIVWHYEKSGLFSVKSGYR 120
            V+ L+    G W   ++R  F P E   ILSIP+  GA EDR++W+YEK+G++SV+SGY+
Sbjct: 753  VSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYK 812

Query: 121  LG-QSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCD 180
            +   +    Q PSSSS+E    WW G WKM IPNKIK FL RLCLDRLPT  NL  RG +
Sbjct: 813  VALLNNPCVQAPSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVE 872

Query: 181  VLNVCVLCRRAGESSMHVFWHCKFFKAVLMESEFGSLIHNVQAGSMFDLLREGLEPV--- 240
            + N C  C R GE S+H+FW CKF +A+ + S+FG L       S F +LRE  E +   
Sbjct: 873  ITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKL-------SPFLILRESHESLSKA 932

Query: 241  --------------------------------VGLVEWAASYISSFQRATSACGVGLQSV 300
                                            + LVEWA  Y   F+ A S    G   V
Sbjct: 933  DFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFREAKSNPITG--RV 992

Query: 301  HAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEM 332
                ++ W PP+ G YK+N DASF      AGLG+++ +  G+VM +A+    +++S +M
Sbjct: 993  TNTAEILWQPPDEGIYKINTDASFLASDQHAGLGIIIHNDRGQVMAAATKYLENIQSVDM 1052

BLAST of Lag0004340 vs. ExPASy TrEMBL
Match: A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.3e-50
Identity = 130/355 (36.62%), Postives = 178/355 (50.14%), Query Frame = 0

Query: 1    MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETR 60
            +G+ PSFIWRSL WG+ELL +GLRWRVG+G S+ VY   WLP    F++ SP  L   T 
Sbjct: 832  VGTNPSFIWRSLQWGKELLNKGLRWRVGNGVSIQVYTDKWLPAPSFFKIMSPPQLPLSTL 891

Query: 61   VADLMTASGQWNEGLIRQHFRPHEVSLILSIPVRA-GAEDRIVWHYEKSGLFSVKSGYRL 120
            V DL T+SGQWN  L++  F   EV   L IP+ +    D ++WHYE++G++SVKSGYRL
Sbjct: 892  VCDLFTSSGQWNVPLLKDIFWDQEVDAKLQIPLASLAGHDCLIWHYERNGMYSVKSGYRL 951

Query: 121  G--QSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCD 180
               +   ++  PS   + +   +WK +W + IPNKIKFFL R   D LP    L  R   
Sbjct: 952  ACLEKDKMSGEPSVRVDLNSK-FWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIA 1011

Query: 181  VLNVCVLCRRAGESSMHVFWHCKFFKAVLMESEFGS------------LIHNVQAGS--- 240
               +C  C R  ES +H  W C+  K V   S +G+            L H +Q  S   
Sbjct: 1012 PTPICPNCHRKAESVLHAVWLCETAKEVWRNSAWGNVCEEWRVNSFRELWHALQLSSSGE 1071

Query: 241  ---MFDLLREGL-------------EPVVGLVEWAASYISSFQRATSACGVGLQSVHARE 300
               +F  L  GL             E    L+         F  A +       ++H R+
Sbjct: 1072 EQGLFAYLCWGLWNRRNSFIFEGKSETATQLLHRMTKLAQEFSNANNLS----HTIHGRQ 1131

Query: 301  DV------RWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQR 316
                     W PP AG YK+NVD + +      G+GVVVR+++G  M  A+ V+R
Sbjct: 1132 SSPQAPLHGWRPPPAGIYKINVDGAVKSGDSVRGVGVVVRNANGEFM--AACVRR 1179

BLAST of Lag0004340 vs. ExPASy TrEMBL
Match: A0A1S8AC01 (Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.5e-49
Identity = 107/343 (31.20%), Postives = 176/343 (51.31%), Query Frame = 0

Query: 1   MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETR 60
           +GS PSFIWRS++WGR+++  G RWR+G G+ V +Y  +W+P    FR  S  TL   + 
Sbjct: 96  LGSNPSFIWRSIIWGRQVILAGSRWRIGKGDKVQIYKASWIPRPSTFRPTSRPTLPENSY 155

Query: 61  VADLMTASGQWNEGLIRQHFRPHEVSLILSIPV-RAGAEDRIVWHYEKSGLFSVKSGYRL 120
           V+ L+    QW+E  I  HF   +   I+S+P+ R   +D+I+WHY+K G +SVKSGY++
Sbjct: 156 VSMLIDDDNQWDEMKIYCHFDKLDADRIVSMPLPRQPKDDQILWHYDKKGRYSVKSGYQV 215

Query: 121 GQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVL 180
                   LPSSS N +    W+ +W + +P K++ F+ R   + LP+ +NL  R     
Sbjct: 216 ALRLKFPALPSSSRNTTNQ--WETIWALDLPEKLRIFMWRAATNLLPSTENLWKRKVAQE 275

Query: 181 NVCVLCRRAGESSMHVFWHCKFFKAVLMESEFGSLIHNVQAGSMFDLLREGL-------- 240
            +C +C+   ES  H   +CK  + V   ++F   +       +  LL+  L        
Sbjct: 276 PICQICKNGVESIFHALVNCKTARKVWRLTQFAEELQEEAGEDLLSLLKGRLCSRRKADI 335

Query: 241 ------------------------EPVVGLVEWAASYISSFQRATSACGVGLQSVHARED 300
                                   +P + L + A + + +++R      + +     +  
Sbjct: 336 ELLVAICWGIWSARNQFIFKLKKEDPQIVLAK-AEAILKAYKRTHVPAPIHMDQQAWKAQ 395

Query: 301 VRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSA 311
             WSPP AGW+K+NVDA+  R++  +GLGVV+R++ G V+ +A
Sbjct: 396 QDWSPPLAGWFKLNVDAATNRDKQTSGLGVVIRNAEGIVVAAA 435

BLAST of Lag0004340 vs. ExPASy TrEMBL
Match: A0A803QQT2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.0e-49
Identity = 128/363 (35.26%), Postives = 177/363 (48.76%), Query Frame = 0

Query: 2   GSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRV 61
           G+  SF+WRSL+WG++L+ +G RWRVG+GESV V    WLP    F+V    +L     V
Sbjct: 248 GANASFVWRSLVWGKKLILKGYRWRVGNGESVRVLEDPWLPRPVTFKVYDQPSLPANLYV 307

Query: 62  ADLMTASGQWNEGLIRQHFRPHEVSLILSIPVRA-GAEDRIVWHYEKSGLFSVKSGYRLG 121
            DL  A GQW+EG IR  F P +V LIL IP      ED+I+WHY K G +SVKSGYR+ 
Sbjct: 308 TDLKLADGQWDEGFIRSIFNPTDVDLILGIPCSDWDFEDKILWHYSKYGEYSVKSGYRMA 367

Query: 122 QSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLN 181
            S    Q    S+  S + WWK +W++ IP K+K F+ ++  + LP   NL  RG     
Sbjct: 368 ASFTTEQ--HQSNEHSIVQWWKKLWRLKIPPKVKHFVWKVAHNWLPANVNLAKRGIASSV 427

Query: 182 VCVLC-RRAGESSMHVFWHCKFFKAVLMESEFGSLIHNVQAGSMFDLL--------REGL 241
           VC  C     ES  H  W CK  K     S     +  +       +L        +E L
Sbjct: 428 VCSRCSSHVDESVAHALWECKASKGYWRVSGLYDDLKQMLGEDNLTMLMRIAAEWDKEKL 487

Query: 242 E--------------PVV---------GLVEWAASYISSFQRATSACGVGLQSVHAREDV 301
           E               VV          ++EW  ++++ F+  T       +S  + ED 
Sbjct: 488 EFFLLVSWNIWNVRNTVVHGGYHPKPEEMIEWCGNFLADFRGDTGR----ERSQRSSEDS 547

Query: 302 RWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAA 332
           RW PP      +NVDA  ++    +GLG VVRD++G V+ +A+ V +    P   E  A 
Sbjct: 548 RWVPPARDQVTINVDAGVKQGGLISGLGYVVRDAAGVVLSAAATVLQQELPPLQLELMAI 604

BLAST of Lag0004340 vs. ExPASy TrEMBL
Match: A0A1S8ACU2 (Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 6.3e-48
Identity = 111/343 (32.36%), Postives = 175/343 (51.02%), Query Frame = 0

Query: 1   MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETR 60
           +GS+PSF+WRS++WGR+++  G+RWR+G+G+ V +Y  +W+P    F+  S  TL  +  
Sbjct: 145 LGSKPSFVWRSIIWGRQVIVNGMRWRIGTGDRVKIYKSHWIPRPQAFKPISAPTLGMDCT 204

Query: 61  VADLMTASGQWNEGLIRQHFRPHEVSLI--LSIPVRAGAEDRIVWHYEKSGLFSVKSGYR 120
           VA+L+  + +W E LI+QHF   +  LI  + +P+ +   D+I+WHY+K G +SVKSGY+
Sbjct: 205 VAELIDENQKWKESLIQQHFNFEDAELISRIQLPI-SPKPDQILWHYDKKGNYSVKSGYQ 264

Query: 121 LGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDV 180
           +         PSSSS  S +G W  +W + +P KIK F+ +   + LPT +NL  R    
Sbjct: 265 IAMRIKHPARPSSSS--SNLGQWNVIWSLELPEKIKIFMWKAARNFLPTSENLWRRKMVQ 324

Query: 181 LNVCVLCRRAGESSMHVFWHCKFFKAVLMESEF---GSLIHNVQAGSMFDLL-----REG 240
             +C  C+   E   H    CK  K +   + F     L+ N    SM   L     ++ 
Sbjct: 325 EPICPRCKMKKEDINHAIMVCKAAKKMWKLTPFVEEMQLLDNQDLLSMLQELVNRRSKDE 384

Query: 241 LEPVVGL-----------------------VEWAASYISSFQRATSACGVGLQSVHARED 300
           L  ++ L                       V  A + + S+ R               + 
Sbjct: 385 LRLIIALCWTAWHTRNIFVFENKRQDPQISVAKAEAVVESYARVRMTKVQAAAKAIPAKG 444

Query: 301 VRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSA 311
            +W PP  G +K NVDA+  +E+ Q GLGVV+RD SG ++++A
Sbjct: 445 AKWIPPPQGHFKANVDAAVNKEKNQVGLGVVIRDDSGAIIIAA 484

BLAST of Lag0004340 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 4.4e-25
Identity = 103/392 (26.28%), Postives = 160/392 (40.82%), Query Frame = 0

Query: 1   MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWL---PEDGNFRV-RSP---- 60
           +GSRPSF+W+S+   +E+L +G R  VG+GE + ++   WL   P     R+ R P    
Sbjct: 103 LGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEY 162

Query: 61  VTLAPETRVADLMTASG-QWNEGLIRQHFRPHEVSLILSI-PVRAGAEDRIVWHYEKSGL 120
            +++   +V+DL+  SG +W + +I   F   E  LI  + P      D   W Y  SG 
Sbjct: 163 ASVSSILKVSDLIDESGREWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGD 222

Query: 121 FSVKSGY-RLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTID 180
           ++VKSGY  L Q       P   S  S    ++ +WK     KI+ FL +   + LP   
Sbjct: 223 YTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAG 282

Query: 181 NLGIRGCDVLNVCVLCRRAGESSMHVFWHCKFFKAVLMESEFGSLIHNVQAGSMFDLL-- 240
            L  R     + C+ C    E+  H+ + C F +     S     +    A S++  L  
Sbjct: 283 ALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAISSIPIPLGGEWADSIYVNLYW 342

Query: 241 -------REGLEPVVGLVEW---------------------------AASYISSFQRATS 300
                      E    LV W                           A   +  ++  T 
Sbjct: 343 VFNLGNGNPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTE 402

Query: 301 A--CGVGLQSVHAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSAS 340
           A  CG   Q V+     RW PP   W K N DA++ R+  + G+G V+R+  G V    +
Sbjct: 403 AESCGTKPQ-VNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGA 462

BLAST of Lag0004340 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 2.1e-19
Identity = 90/375 (24.00%), Postives = 152/375 (40.53%), Query Frame = 0

Query: 6   SFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLM 65
           S+ W SLL G  LL++G R  +G G+++ + G++ + +    R  +      E  + +L 
Sbjct: 21  SYGWASLLDGIALLKKGTRHLIGDGQNIRI-GLDNIVDSHPPRPLNTEETYKEMTINNLF 80

Query: 66  TASGQ---WNEGLIRQHFRPHEVSLILSIPV-RAGAEDRIVWHYEKSGLFSVKSGYRLGQ 125
              G    W++  I Q     +   I  I + ++   D+I+W+Y  +G ++V+SGY L  
Sbjct: 81  ERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLT 140

Query: 126 SAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNV 185
                 +P+ +     +     +W + I  K+K FL R     L T + L  RG  +   
Sbjct: 141 HDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPS 200

Query: 186 CVLCRRAGESSMHVFWHCKF------------FKAVLMESEFGSLIHN----VQAGSMFD 245
           C  C R  ES  H  + C F             +  LM ++F   I N    VQ  +M D
Sbjct: 201 CPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSD 260

Query: 246 LLREGLEPVVGLVE-WAAS---YISSFQRATSACGVGLQS-VH----------------- 305
             +  L PV  +   W A      + F+ + S   +  ++  H                 
Sbjct: 261 FHK--LLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTR 320

Query: 306 --AREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPE 337
             A   + W  P A + K N DA F  ++ +A  G ++R+  G  +   S+   H  +P 
Sbjct: 321 QIAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPL 380

BLAST of Lag0004340 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 2.3e-05
Identity = 43/217 (19.82%), Postives = 80/217 (36.87%), Query Frame = 0

Query: 142 KGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHCKF 201
           + +WK+ +  KIK FL R     L T   L  R  D   +C  C    E+  H+ ++C +
Sbjct: 35  QAIWKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPY 94

Query: 202 FKAVLMESEFGSLIHNVQAGSMF---DLLREGLEPVVGLVE------------------- 261
            ++V   +       N+  G+ +       + L  ++ L +                   
Sbjct: 95  TQSVWRSA-------NIIIGNQWGPPSSFEDNLNRLIQLSKTQTTNSLDRFLPFWIMWRL 154

Query: 262 WAASYISSFQRATSA----CGVGLQ---------------SVHA---------REDVRWS 309
           W +  +  FQ+   +       G+Q               +VH          R+  +W+
Sbjct: 155 WKSRNVFLFQQKCQSPDYEARKGIQDATEWLNANETTENTNVHVATNPIQTSRRDSSQWN 214

BLAST of Lag0004340 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 47.0 bits (110), Expect = 3.8e-05
Identity = 19/44 (43.18%), Postives = 29/44 (65.91%), Query Frame = 0

Query: 1   MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPED 45
           +G+RPS+ WRS++ GRELL RGL   +G G    V+   W+ ++
Sbjct: 104 VGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWIMDE 147

BLAST of Lag0004340 vs. TAIR 10
Match: AT1G43730.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 45.1 bits (105), Expect = 1.5e-04
Identity = 24/66 (36.36%), Postives = 32/66 (48.48%), Query Frame = 0

Query: 140 WWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHC 199
           W+K VW  +   K  F    +  +RL T D L   G  +  VC+LC    ES  H+F+ C
Sbjct: 151 WYKAVWFKNHVPKHAFICWVVAWNRLHTRDRLRSWGLSIPAVCLLCNSHDESRAHLFFEC 210

Query: 200 KFFKAV 206
            F  AV
Sbjct: 211 PFCGAV 216

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022150918.11.8e-7341.46uncharacterized protein LOC111018954 [Momordica charantia][more]
XP_024037590.11.4e-5434.54uncharacterized protein LOC112097210 [Citrus clementina][more]
VVA32947.14.8e-5036.62PREDICTED: retrotransposon [Prunus dulcis][more]
XP_024950112.11.1e-4931.59uncharacterized protein LOC112496847 [Citrus sinensis][more]
XP_024041921.19.1e-4933.23uncharacterized protein LOC112099052 [Citrus clementina][more]
Match NameE-valueIdentityDescription
P0C2F63.1e-1522.96Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
P932955.4e-0443.18Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A6J1DAR48.8e-7441.46uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A5E4FZN92.3e-5036.62PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1[more]
A0A1S8AC011.5e-4931.20Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1[more]
A0A803QQT22.0e-4935.26Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A1S8ACU26.3e-4832.36Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G29090.14.4e-2526.28Ribonuclease H-like superfamily protein [more]
AT3G09510.12.1e-1924.00Ribonuclease H-like superfamily protein [more]
AT2G02650.12.3e-0519.82Ribonuclease H-like superfamily protein [more]
ATMG00310.13.8e-0543.18RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT1G43730.11.5e-0436.36RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 131..204
e-value: 1.4E-16
score: 60.9
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 281..331
e-value: 2.1E-6
score: 27.6
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 14..330
NoneNo IPR availablePANTHERPTHR46736:SF6SUBFAMILY NOT NAMEDcoord: 14..330

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0004340.1Lag0004340.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity