Lag0004322 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0004322
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	R2r3-myb transcription factor, putative
Location	chr6: 2941050 .. 2941742 (+)
RNA-Seq Expression	Lag0004322
Synteny	Lag0004322

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAGGACCTCATCTTCTTCCTCCTCCTCCGATTCCACGTCATCTGATTCTTCCTTCTCCGGCAAGGCCTCGCGCCGCCCGGAGAAGATTAAAGGGCCCTGGAGCGCGGAGGAGGACCGGATTCTCACTCAGCTCGTCGCCCGGTATGGCCCGAGGAATTGGTCGTTGATTAGTCGTTACATTAAGGGCCGGTCCGGGAAATCTTGCCGGCTCAGGTGGTGTAACCAGCTCAGTCCCAATGTGGAGCACCGCCCGTTTTCGCCGACGGAGGATGAGACGATTTTGGCGGCTCATGCCCGGTTTGGGAACCGGTGGGCCACCATTGCCCGGTTGCTTCCGGGCCGGACCGATAATGCCGTTAAGAACCACTGGAACTCGACGCTGAAGCGACGGGCGAGGGAACAGCAACAGCAAATGGTGATTGACGGAATTGCCCCTGACAGTCACGGTAATGCCGTGAACCTTGCGGGTGATTCGAAGCTGTCCGTACCTCTGGAGGACGACCCCTTGACCGCGTTGACTCTAGCGCCGCCGGGGATCGGCGGAAGAGCGGCGGCGACGTCGGCGGAGGAGGAGCGGCGGGTTGAGAGTTTGCCGGCGGGGTTTTGGGATGCAATGAGGGATGTGATAGCGAGGGAGGTGAGGGAGTACATGACGACGACGTTTATGGAAAATCCGGAGTTTCACTAA

mRNA sequence

ATGATGAGGACCTCATCTTCTTCCTCCTCCTCCGATTCCACGTCATCTGATTCTTCCTTCTCCGGCAAGGCCTCGCGCCGCCCGGAGAAGATTAAAGGGCCCTGGAGCGCGGAGGAGGACCGGATTCTCACTCAGCTCGTCGCCCGGTATGGCCCGAGGAATTGGTCGTTGATTAGTCGTTACATTAAGGGCCGGTCCGGGAAATCTTGCCGGCTCAGGTGGTGTAACCAGCTCAGTCCCAATGTGGAGCACCGCCCGTTTTCGCCGACGGAGGATGAGACGATTTTGGCGGCTCATGCCCGGTTTGGGAACCGGTGGGCCACCATTGCCCGGTTGCTTCCGGGCCGGACCGATAATGCCGTTAAGAACCACTGGAACTCGACGCTGAAGCGACGGGCGAGGGAACAGCAACAGCAAATGGTGATTGACGGAATTGCCCCTGACAGTCACGGTAATGCCGTGAACCTTGCGGGTGATTCGAAGCTGTCCGTACCTCTGGAGGACGACCCCTTGACCGCGTTGACTCTAGCGCCGCCGGGGATCGGCGGAAGAGCGGCGGCGACGTCGGCGGAGGAGGAGCGGCGGGTTGAGAGTTTGCCGGCGGGGTTTTGGGATGCAATGAGGGATGTGATAGCGAGGGAGGTGAGGGAGTACATGACGACGACGTTTATGGAAAATCCGGAGTTTCACTAA

Coding sequence (CDS)

ATGATGAGGACCTCATCTTCTTCCTCCTCCTCCGATTCCACGTCATCTGATTCTTCCTTCTCCGGCAAGGCCTCGCGCCGCCCGGAGAAGATTAAAGGGCCCTGGAGCGCGGAGGAGGACCGGATTCTCACTCAGCTCGTCGCCCGGTATGGCCCGAGGAATTGGTCGTTGATTAGTCGTTACATTAAGGGCCGGTCCGGGAAATCTTGCCGGCTCAGGTGGTGTAACCAGCTCAGTCCCAATGTGGAGCACCGCCCGTTTTCGCCGACGGAGGATGAGACGATTTTGGCGGCTCATGCCCGGTTTGGGAACCGGTGGGCCACCATTGCCCGGTTGCTTCCGGGCCGGACCGATAATGCCGTTAAGAACCACTGGAACTCGACGCTGAAGCGACGGGCGAGGGAACAGCAACAGCAAATGGTGATTGACGGAATTGCCCCTGACAGTCACGGTAATGCCGTGAACCTTGCGGGTGATTCGAAGCTGTCCGTACCTCTGGAGGACGACCCCTTGACCGCGTTGACTCTAGCGCCGCCGGGGATCGGCGGAAGAGCGGCGGCGACGTCGGCGGAGGAGGAGCGGCGGGTTGAGAGTTTGCCGGCGGGGTTTTGGGATGCAATGAGGGATGTGATAGCGAGGGAGGTGAGGGAGTACATGACGACGACGTTTATGGAAAATCCGGAGTTTCACTAA

Protein sequence

MMRTSSSSSSSDSTSSDSSFSGKASRRPEKIKGPWSAEEDRILTQLVARYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRAREQQQQMVIDGIAPDSHGNAVNLAGDSKLSVPLEDDPLTALTLAPPGIGGRAAATSAEEERRVESLPAGFWDAMRDVIAREVREYMTTTFMENPEFH

Homology

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BLAST of Lag0004322 vs. NCBI nr
Match: XP_022144294.1 (transcription factor MYB1-like [Momordica charantia])

HSP 1 Score: 411.4 bits (1056), Expect = 5.2e-111
Identity = 205/231 (88.74%), Postives = 218/231 (94.37%), Query Frame = 0


Query: 1   MMRTSSSSSSSDSTSSDSSFSGKASRRPEKIKGPWSAEEDRILTQLVARYGPRNWSLISR 60
           +MR+SSSSSSSDSTSSDSSFSGKASRRPEKIKGPWSAEEDRILTQLV RYGPRNWSLISR
Sbjct: 4   LMRSSSSSSSSDSTSSDSSFSGKASRRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISR 63

Query: 61  YIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNA 120
           YIKGRSGKSCRLRWCNQLSP+VEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNA
Sbjct: 64  YIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNA 123

Query: 121 VKNHWNSTLKRRAREQQQQMVIDGIAPDSHGNAVNLAGDSKLSVP-LEDDPLTALTLAPP 180
           VKNHWNSTLKRRARE+QQQ+V+DGIAP++HGN+VNL  D KLSVP LEDDPLTALTLAPP
Sbjct: 124 VKNHWNSTLKRRARERQQQLVMDGIAPENHGNSVNLPSDLKLSVPDLEDDPLTALTLAPP 183

Query: 181 GIGGRAAATSAEEERRVESLPAGFWDAMRDVIAREVREYMTTTFMENPEFH 231
           GIGG     +A ++RR+ESLP GFWDAMRDVIAREVREYMTTTFMENPE H
Sbjct: 184 GIGGADPRAAAVDDRRIESLPVGFWDAMRDVIAREVREYMTTTFMENPELH 234

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BLAST of Lag0004322 vs. NCBI nr
Match: XP_038885826.1 (transcription factor MYB25-like [Benincasa hispida])

HSP 1 Score: 409.1 bits (1050), Expect = 2.6e-110
Identity = 208/232 (89.66%), Postives = 216/232 (93.10%), Query Frame = 0


Query: 2   MRTSSSSSSSDSTSSDSSFSGKASRRPEKIKGPWSAEEDRILTQLVARYGPRNWSLISRY 61
           MRTSSSSSSSDSTSSDSSFSGK  RRPEKIKGPWSAEEDRILTQLVARYGPRNWSLISRY
Sbjct: 1   MRTSSSSSSSDSTSSDSSFSGKGLRRPEKIKGPWSAEEDRILTQLVARYGPRNWSLISRY 60

Query: 62  IKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAV 121
           IKGRSGKSCRLRWCNQLSPNVEHRPFSP EDETILAAHARFGNRWATIARLLPGRTDNAV
Sbjct: 61  IKGRSGKSCRLRWCNQLSPNVEHRPFSPMEDETILAAHARFGNRWATIARLLPGRTDNAV 120

Query: 122 KNHWNSTLKRRAREQQQQMVIDGIAPDSHG---NAVNLAGDSKLSVPLEDDPLTALTLAP 181
           KNHWNSTLKRRAREQQQQ+V+D IAP++HG   NAVN+A D KLSVPLE+DPLTALTLAP
Sbjct: 121 KNHWNSTLKRRAREQQQQLVMDEIAPENHGNNNNAVNIASDLKLSVPLEEDPLTALTLAP 180

Query: 182 PGIGGRAAATSAEEERRVESLPAGFWDAMRDVIAREVREYMTTTFMENPEFH 231
           PGIGG    T+  EERRVE+ PAGFWDAMRDVIAREVREYMTTTFMENPEFH
Sbjct: 181 PGIGG--GRTTTAEERRVENFPAGFWDAMRDVIAREVREYMTTTFMENPEFH 230

[Close]

BLAST of Lag0004322 vs. NCBI nr
Match: KAA0033571.1 (transcription factor MYB44-like [Cucumis melo var. makuwa])

HSP 1 Score: 393.3 bits (1009), Expect = 1.5e-105
Identity = 208/240 (86.67%), Postives = 215/240 (89.58%), Query Frame = 0


Query: 1   MMRTSSS-SSSSDSTSSDSSFSGKASRRPEKIKGPWSAEEDRILTQLVARYGPRNWSLIS 60
           MMR+SSS SSSSDSTSSDSSFSGK  RRPEKIKGPWSAEEDRILTQLV RYG RNWSLIS
Sbjct: 1   MMRSSSSNSSSSDSTSSDSSFSGKGLRRPEKIKGPWSAEEDRILTQLVDRYGARNWSLIS 60

Query: 61  RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN 120
           RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN
Sbjct: 61  RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN 120

Query: 121 AVKNHWNSTLKRRARE-QQQQMVIDGIAPDSHG------NAVNLAGDSKL--SVPLEDDP 180
           AVKNHWNSTLKRRARE QQQQ+V+DGI P+ HG      NAVN+A D KL  SVPLEDDP
Sbjct: 121 AVKNHWNSTLKRRAREQQQQQLVMDGITPECHGSNNNNNNAVNIASDLKLSVSVPLEDDP 180

Query: 181 LTALTLAPPGIGGRAAATSAEEERRVESLPAGFWDAMRDVIAREVREYMTTTFMENPEFH 231
           LTALTLAPPGIGG    T+  +ERRVES PAGFWDAMRDVIAREVREYMTTTFMENPEFH
Sbjct: 181 LTALTLAPPGIGG-VRTTAVVDERRVESFPAGFWDAMRDVIAREVREYMTTTFMENPEFH 239

[Close]

BLAST of Lag0004322 vs. NCBI nr
Match: XP_008444647.1 (PREDICTED: transcription factor MYB44-like [Cucumis melo])

HSP 1 Score: 391.7 bits (1005), Expect = 4.3e-105
Identity = 208/240 (86.67%), Postives = 215/240 (89.58%), Query Frame = 0


Query: 1   MMRTSSS-SSSSDSTSSDSSFSGKASRRPEKIKGPWSAEEDRILTQLVARYGPRNWSLIS 60
           MMR+SSS SSSSDSTSSDSSFSGK  RRPEKIKGPWSAEEDRILTQLV RYG RNWSLIS
Sbjct: 1   MMRSSSSNSSSSDSTSSDSSFSGKGLRRPEKIKGPWSAEEDRILTQLVDRYGARNWSLIS 60

Query: 61  RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN 120
           RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN
Sbjct: 61  RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN 120

Query: 121 AVKNHWNSTLKRRARE-QQQQMVIDGIAPDSHG------NAVNLAGDSKL--SVPLEDDP 180
           AVKNHWNSTLKRRARE QQQQ+V+DGI P+ HG      NAVN+A D KL  SVPLEDDP
Sbjct: 121 AVKNHWNSTLKRRAREQQQQQLVMDGITPECHGSNNNNNNAVNIASDLKLSVSVPLEDDP 180

Query: 181 LTALTLAPPGIGGRAAATSAEEERRVESLPAGFWDAMRDVIAREVREYMTTTFMENPEFH 231
           LTALTLAPPGIGG    T+A +ER VES PAGFWDAMRDVIAREVREYMTTTFMENPEFH
Sbjct: 181 LTALTLAPPGIGG--VRTTAVDERLVESFPAGFWDAMRDVIAREVREYMTTTFMENPEFH 238

[Close]

BLAST of Lag0004322 vs. NCBI nr
Match: XP_004152727.1 (transcription factor MYB44 [Cucumis sativus])

HSP 1 Score: 389.8 bits (1000), Expect = 1.6e-104
Identity = 208/243 (85.60%), Postives = 214/243 (88.07%), Query Frame = 0


Query: 1   MMRTSSS-SSSSDSTSSDSSFSGKASRRPEKIKGPWSAEEDRILTQLVARYGPRNWSLIS 60
           MMR+SSS SSSSDSTSSDSSFSGK  RRPEKIKGPWSAEEDRILTQLV RYG RNWSLIS
Sbjct: 1   MMRSSSSNSSSSDSTSSDSSFSGKGLRRPEKIKGPWSAEEDRILTQLVDRYGARNWSLIS 60

Query: 61  RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN 120
           RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN
Sbjct: 61  RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN 120

Query: 121 AVKNHWNSTLKRRAREQQ--QQMVIDGIAPDSHG-------NAVNLAGDSKL----SVPL 180
           AVKNHWNSTLKRRAREQQ  QQ+V+DGI P+ HG       N VN+A D KL    SVPL
Sbjct: 121 AVKNHWNSTLKRRAREQQHHQQLVMDGITPECHGISNNNNNNVVNIASDLKLSVSVSVPL 180

Query: 181 EDDPLTALTLAPPGIGGRAAATSAEEERRVESLPAGFWDAMRDVIAREVREYMTTTFMEN 230
           EDDPLTALTLAPPGIGG    T+A EERRVES PAGFWDAMRDVIAREVREYMTTTFMEN
Sbjct: 181 EDDPLTALTLAPPGIGG--VRTTAAEERRVESFPAGFWDAMRDVIAREVREYMTTTFMEN 240

[Close]

BLAST of Lag0004322 vs. ExPASy Swiss-Prot
Match: O23160 (Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.1e-44
Identity = 84/124 (67.74%), Postives = 97/124 (78.23%), Query Frame = 0


Query: 21  SGKASRRPEKIKGPWSAEEDRILTQLVARYGPRNWSLISRYIKGRSGKSCRLRWCNQLSP 80
           S    +  E+IKGPWS EED +L +LV ++GPRNWSLIS+ I GRSGKSCRLRWCNQLSP
Sbjct: 2   SNPTRKNMERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP 61

Query: 81  NVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRAREQQQQM 140
            VEHR FS  EDETI+ AHARFGN+WATI+RLL GRTDNA+KNHWNSTLKR+   + Q  
Sbjct: 62  EVEHRAFSQEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVEGQSC 121

Query: 141 VIDG 145
              G
Sbjct: 122 DFGG 125

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BLAST of Lag0004322 vs. ExPASy Swiss-Prot
Match: Q9FDW1 (Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.0e-44
Identity = 81/104 (77.88%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 29  EKIKGPWSAEEDRILTQLVARYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPNVEHRPFS 88
           ++IKGPWS EED  L +LV +YGPRNW++IS+ I GRSGKSCRLRWCNQLSP VEHRPFS
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 89  PTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRR 133
             EDETI  AHA+FGN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of Lag0004322 vs. ExPASy Swiss-Prot
Match: Q9SN12 (Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.0e-44
Identity = 80/104 (76.92%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 29  EKIKGPWSAEEDRILTQLVARYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPNVEHRPFS 88
           +++KGPWS EED  L ++V +YGPRNWS IS+ I GRSGKSCRLRWCNQLSP VEHRPFS
Sbjct: 3   DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 62

Query: 89  PTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRR 133
           P EDETI+ A A+FGN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 63  PEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of Lag0004322 vs. ExPASy Swiss-Prot
Match: Q42575 (Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.3e-36
Identity = 75/131 (57.25%), Postives = 93/131 (70.99%), Query Frame = 0


Query: 3   RTSSSSSSSDSTSSDSSFSGKASR-RPEKIKGPWSAEEDRILTQLVARYGPRNWSLISRY 62
           R        D     + F G + R R +++KGPWS EED +L++LV R G RNWS I+R 
Sbjct: 25  RGDCDGDGGDVGEDAAGFVGTSGRGRRDRVKGPWSKEEDDVLSELVKRLGARNWSFIARS 84

Query: 63  IKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAV 122
           I GRSGKSCRLRWCNQL+PN+    F+  ED+ I+AAHA  GN+WA IA+LLPGRTDNA+
Sbjct: 85  IPGRSGKSCRLRWCNQLNPNLIRNSFTEVEDQAIIAAHAIHGNKWAVIAKLLPGRTDNAI 144

Query: 123 KNHWNSTLKRR 133
           KNHWNS L+RR
Sbjct: 145 KNHWNSALRRR 155

[Close]

BLAST of Lag0004322 vs. ExPASy Swiss-Prot
Match: O04192 (Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.3e-36
Identity = 72/126 (57.14%), Postives = 93/126 (73.81%), Query Frame = 0


Query: 11  SDSTSSDSSFSGKASRRPEKIKGPWSAEEDRILTQLVARYGPRNWSLISRYIKGRSGKSC 70
           ++   SD++  GK+     K+KGPW  E+D  LT+LV   GPRNW+LISR I GRSGKSC
Sbjct: 34  AELAKSDANGGGKS-----KVKGPWLPEQDEALTRLVKMCGPRNWNLISRGIPGRSGKSC 93

Query: 71  RLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLK 130
           RLRWCNQL P ++ +PFS  E+  I++A A  GN+W+ IA+LLPGRTDNA+KNHWNS L+
Sbjct: 94  RLRWCNQLDPILKRKPFSDEEEHMIMSAQAVLGNKWSVIAKLLPGRTDNAIKNHWNSNLR 153

Query: 131 RRAREQ 137
           R+  EQ
Sbjct: 154 RKPAEQ 154

[Close]

BLAST of Lag0004322 vs. ExPASy TrEMBL
Match: A0A6J1CRX2 (transcription factor MYB1-like OS=Momordica charantia OX=3673 GN=LOC111014010 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 2.5e-111
Identity = 205/231 (88.74%), Postives = 218/231 (94.37%), Query Frame = 0


Query: 1   MMRTSSSSSSSDSTSSDSSFSGKASRRPEKIKGPWSAEEDRILTQLVARYGPRNWSLISR 60
           +MR+SSSSSSSDSTSSDSSFSGKASRRPEKIKGPWSAEEDRILTQLV RYGPRNWSLISR
Sbjct: 4   LMRSSSSSSSSDSTSSDSSFSGKASRRPEKIKGPWSAEEDRILTQLVGRYGPRNWSLISR 63

Query: 61  YIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNA 120
           YIKGRSGKSCRLRWCNQLSP+VEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNA
Sbjct: 64  YIKGRSGKSCRLRWCNQLSPSVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNA 123

Query: 121 VKNHWNSTLKRRAREQQQQMVIDGIAPDSHGNAVNLAGDSKLSVP-LEDDPLTALTLAPP 180
           VKNHWNSTLKRRARE+QQQ+V+DGIAP++HGN+VNL  D KLSVP LEDDPLTALTLAPP
Sbjct: 124 VKNHWNSTLKRRARERQQQLVMDGIAPENHGNSVNLPSDLKLSVPDLEDDPLTALTLAPP 183

Query: 181 GIGGRAAATSAEEERRVESLPAGFWDAMRDVIAREVREYMTTTFMENPEFH 231
           GIGG     +A ++RR+ESLP GFWDAMRDVIAREVREYMTTTFMENPE H
Sbjct: 184 GIGGADPRAAAVDDRRIESLPVGFWDAMRDVIAREVREYMTTTFMENPELH 234

[Close]

BLAST of Lag0004322 vs. ExPASy TrEMBL
Match: A0A5A7SVX1 (Transcription factor MYB44-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48285G00010 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 7.1e-106
Identity = 208/240 (86.67%), Postives = 215/240 (89.58%), Query Frame = 0


Query: 1   MMRTSSS-SSSSDSTSSDSSFSGKASRRPEKIKGPWSAEEDRILTQLVARYGPRNWSLIS 60
           MMR+SSS SSSSDSTSSDSSFSGK  RRPEKIKGPWSAEEDRILTQLV RYG RNWSLIS
Sbjct: 1   MMRSSSSNSSSSDSTSSDSSFSGKGLRRPEKIKGPWSAEEDRILTQLVDRYGARNWSLIS 60

Query: 61  RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN 120
           RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN
Sbjct: 61  RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN 120

Query: 121 AVKNHWNSTLKRRARE-QQQQMVIDGIAPDSHG------NAVNLAGDSKL--SVPLEDDP 180
           AVKNHWNSTLKRRARE QQQQ+V+DGI P+ HG      NAVN+A D KL  SVPLEDDP
Sbjct: 121 AVKNHWNSTLKRRAREQQQQQLVMDGITPECHGSNNNNNNAVNIASDLKLSVSVPLEDDP 180

Query: 181 LTALTLAPPGIGGRAAATSAEEERRVESLPAGFWDAMRDVIAREVREYMTTTFMENPEFH 231
           LTALTLAPPGIGG    T+  +ERRVES PAGFWDAMRDVIAREVREYMTTTFMENPEFH
Sbjct: 181 LTALTLAPPGIGG-VRTTAVVDERRVESFPAGFWDAMRDVIAREVREYMTTTFMENPEFH 239

[Close]

BLAST of Lag0004322 vs. ExPASy TrEMBL
Match: A0A1S3BAB9 (transcription factor MYB44-like OS=Cucumis melo OX=3656 GN=LOC103487918 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.1e-105
Identity = 208/240 (86.67%), Postives = 215/240 (89.58%), Query Frame = 0


Query: 1   MMRTSSS-SSSSDSTSSDSSFSGKASRRPEKIKGPWSAEEDRILTQLVARYGPRNWSLIS 60
           MMR+SSS SSSSDSTSSDSSFSGK  RRPEKIKGPWSAEEDRILTQLV RYG RNWSLIS
Sbjct: 1   MMRSSSSNSSSSDSTSSDSSFSGKGLRRPEKIKGPWSAEEDRILTQLVDRYGARNWSLIS 60

Query: 61  RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN 120
           RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN
Sbjct: 61  RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN 120

Query: 121 AVKNHWNSTLKRRARE-QQQQMVIDGIAPDSHG------NAVNLAGDSKL--SVPLEDDP 180
           AVKNHWNSTLKRRARE QQQQ+V+DGI P+ HG      NAVN+A D KL  SVPLEDDP
Sbjct: 121 AVKNHWNSTLKRRAREQQQQQLVMDGITPECHGSNNNNNNAVNIASDLKLSVSVPLEDDP 180

Query: 181 LTALTLAPPGIGGRAAATSAEEERRVESLPAGFWDAMRDVIAREVREYMTTTFMENPEFH 231
           LTALTLAPPGIGG    T+A +ER VES PAGFWDAMRDVIAREVREYMTTTFMENPEFH
Sbjct: 181 LTALTLAPPGIGG--VRTTAVDERLVESFPAGFWDAMRDVIAREVREYMTTTFMENPEFH 238

[Close]

BLAST of Lag0004322 vs. ExPASy TrEMBL
Match: A0A0A0LKY3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360620 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 7.8e-105
Identity = 208/243 (85.60%), Postives = 214/243 (88.07%), Query Frame = 0


Query: 1   MMRTSSS-SSSSDSTSSDSSFSGKASRRPEKIKGPWSAEEDRILTQLVARYGPRNWSLIS 60
           MMR+SSS SSSSDSTSSDSSFSGK  RRPEKIKGPWSAEEDRILTQLV RYG RNWSLIS
Sbjct: 1   MMRSSSSNSSSSDSTSSDSSFSGKGLRRPEKIKGPWSAEEDRILTQLVDRYGARNWSLIS 60

Query: 61  RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN 120
           RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN
Sbjct: 61  RYIKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDN 120

Query: 121 AVKNHWNSTLKRRAREQQ--QQMVIDGIAPDSHG-------NAVNLAGDSKL----SVPL 180
           AVKNHWNSTLKRRAREQQ  QQ+V+DGI P+ HG       N VN+A D KL    SVPL
Sbjct: 121 AVKNHWNSTLKRRAREQQHHQQLVMDGITPECHGISNNNNNNVVNIASDLKLSVSVSVPL 180

Query: 181 EDDPLTALTLAPPGIGGRAAATSAEEERRVESLPAGFWDAMRDVIAREVREYMTTTFMEN 230
           EDDPLTALTLAPPGIGG    T+A EERRVES PAGFWDAMRDVIAREVREYMTTTFMEN
Sbjct: 181 EDDPLTALTLAPPGIGG--VRTTAAEERRVESFPAGFWDAMRDVIAREVREYMTTTFMEN 240

[Close]

BLAST of Lag0004322 vs. ExPASy TrEMBL
Match: A0A6J1GI94 (transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111454401 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 9.6e-103
Identity = 196/229 (85.59%), Postives = 201/229 (87.77%), Query Frame = 0


Query: 2   MRTSSSSSSSDSTSSDSSFSGKASRRPEKIKGPWSAEEDRILTQLVARYGPRNWSLISRY 61
           M TSSSSSSS STSSDSSFSG  SRRPEKIKGPWSAEEDRIL QLV RYGPRNWSLISRY
Sbjct: 1   MTTSSSSSSSSSTSSDSSFSGNPSRRPEKIKGPWSAEEDRILIQLVDRYGPRNWSLISRY 60

Query: 62  IKGRSGKSCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAV 121
           IKGRSGKSCRLRWCNQLSPNVEHRPFS TEDETILAAHARFGNRWATIARLLPGRTDNAV
Sbjct: 61  IKGRSGKSCRLRWCNQLSPNVEHRPFSATEDETILAAHARFGNRWATIARLLPGRTDNAV 120

Query: 122 KNHWNSTLKRRAREQQQQMVIDGIAPDSHGNAVNLAGDSKLSVPLEDDPLTALTLAPPGI 181
           KNHWNSTLKRRAR QQ  + IDGI PD+H NAV    D KLSVPLEDDPLTALTLAPPGI
Sbjct: 121 KNHWNSTLKRRARHQQHHLAIDGITPDNHANAVT-DSDLKLSVPLEDDPLTALTLAPPGI 180

Query: 182 GGRAAATSAEEERRVESLPAGFWDAMRDVIAREVREYMTTTFMENPEFH 231
            G   A    EERR+ES PAGFWDAMRDV+AREVREYMTTTF+EN EFH
Sbjct: 181 SGGVVA----EERRIESFPAGFWDAMRDVVAREVREYMTTTFLENQEFH 224

[Close]

BLAST of Lag0004322 vs. TAIR 10
Match: AT4G37260.1 (myb domain protein 73 )

HSP 1 Score: 181.4 bits (459), Expect = 8.2e-46
Identity = 84/124 (67.74%), Postives = 97/124 (78.23%), Query Frame = 0


Query: 21  SGKASRRPEKIKGPWSAEEDRILTQLVARYGPRNWSLISRYIKGRSGKSCRLRWCNQLSP 80
           S    +  E+IKGPWS EED +L +LV ++GPRNWSLIS+ I GRSGKSCRLRWCNQLSP
Sbjct: 2   SNPTRKNMERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP 61

Query: 81  NVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRRAREQQQQM 140
            VEHR FS  EDETI+ AHARFGN+WATI+RLL GRTDNA+KNHWNSTLKR+   + Q  
Sbjct: 62  EVEHRAFSQEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVEGQSC 121

Query: 141 VIDG 145
              G
Sbjct: 122 DFGG 125

[Close]

BLAST of Lag0004322 vs. TAIR 10
Match: AT3G50060.1 (myb domain protein 77 )

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-45
Identity = 80/104 (76.92%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 29  EKIKGPWSAEEDRILTQLVARYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPNVEHRPFS 88
           +++KGPWS EED  L ++V +YGPRNWS IS+ I GRSGKSCRLRWCNQLSP VEHRPFS
Sbjct: 3   DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 62

Query: 89  PTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRR 133
           P EDETI+ A A+FGN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 63  PEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of Lag0004322 vs. TAIR 10
Match: AT5G67300.1 (myb domain protein r1 )

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-45
Identity = 81/104 (77.88%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 29  EKIKGPWSAEEDRILTQLVARYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPNVEHRPFS 88
           ++IKGPWS EED  L +LV +YGPRNW++IS+ I GRSGKSCRLRWCNQLSP VEHRPFS
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 89  PTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRR 133
             EDETI  AHA+FGN+WATIARLL GRTDNAVKNHWNSTLKR+
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of Lag0004322 vs. TAIR 10
Match: AT2G23290.1 (myb domain protein 70 )

HSP 1 Score: 180.3 bits (456), Expect = 1.8e-45
Identity = 81/112 (72.32%), Postives = 94/112 (83.93%), Query Frame = 0


Query: 21  SGKASRRPEKIKGPWSAEEDRILTQLVARYGPRNWSLISRYIKGRSGKSCRLRWCNQLSP 80
           SG   +  ++IKGPWS EED +L  LV ++GPRNWSLIS+ I GRSGKSCRLRWCNQLSP
Sbjct: 2   SGSTRKEMDRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP 61

Query: 81  NVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNSTLKRR 133
            VEHR F+  ED+TI+ AHARFGN+WATIARLL GRTDNA+KNHWNSTLKR+
Sbjct: 62  EVEHRGFTAEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113

[Close]

BLAST of Lag0004322 vs. TAIR 10
Match: AT3G55730.1 (myb domain protein 109 )

HSP 1 Score: 157.5 bits (397), Expect = 1.3e-38
Identity = 75/124 (60.48%), Postives = 93/124 (75.00%), Query Frame = 0


Query: 9   SSSDSTSSDSSFSGKASRRPEKIKGPWSAEEDRILTQLVARYGPRNWSLISRYIKGRSGK 68
           ++ DS+       G    R  K+KGPWS EED +LT+LV + GPRNWSLI+R I GRSGK
Sbjct: 34  AAGDSSGGGGCGGGGGGIR-SKVKGPWSTEEDAVLTKLVRKLGPRNWSLIARGIPGRSGK 93

Query: 69  SCRLRWCNQLSPNVEHRPFSPTEDETILAAHARFGNRWATIARLLPGRTDNAVKNHWNST 128
           SCRLRWCNQL P ++ +PFS  ED  I++AHA  GN+WA IA+LL GRTDNA+KNHWNST
Sbjct: 94  SCRLRWCNQLDPCLKRKPFSDEEDRMIISAHAVHGNKWAVIAKLLTGRTDNAIKNHWNST 153

Query: 129 LKRR 133
           L+R+
Sbjct: 154 LRRK 156

The following BLAST results are available for this feature:

BLAST of Lag0004322 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144294.1	5.2e-111	88.74	transcription factor MYB1-like [Momordica charantia]	[more]
XP_038885826.1	2.6e-110	89.66	transcription factor MYB25-like [Benincasa hispida]	[more]
KAA0033571.1	1.5e-105	86.67	transcription factor MYB44-like [Cucumis melo var. makuwa]	[more]
XP_008444647.1	4.3e-105	86.67	PREDICTED: transcription factor MYB44-like [Cucumis melo]	[more]
XP_004152727.1	1.6e-104	85.60	transcription factor MYB44 [Cucumis sativus]	[more]

BLAST of Lag0004322 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23160	1.1e-44	67.74	Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1	[more]
Q9FDW1	2.0e-44	77.88	Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1	[more]
Q9SN12	2.0e-44	76.92	Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1	[more]
Q42575	3.3e-36	57.25	Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1	[more]
O04192	3.3e-36	57.14	Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1	[more]

BLAST of Lag0004322 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CRX2	2.5e-111	88.74	transcription factor MYB1-like OS=Momordica charantia OX=3673 GN=LOC111014010 PE...	[more]
A0A5A7SVX1	7.1e-106	86.67	Transcription factor MYB44-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S3BAB9	2.1e-105	86.67	transcription factor MYB44-like OS=Cucumis melo OX=3656 GN=LOC103487918 PE=4 SV=...	[more]
A0A0A0LKY3	7.8e-105	85.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360620 PE=4 SV=1	[more]
A0A6J1GI94	9.6e-103	85.59	transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111454401 PE...	[more]

BLAST of Lag0004322 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37260.1	8.2e-46	67.74	myb domain protein 73	[more]
AT3G50060.1	1.4e-45	76.92	myb domain protein 77	[more]
AT5G67300.1	1.4e-45	77.88	myb domain protein r1	[more]
AT2G23290.1	1.8e-45	72.32	myb domain protein 70	[more]
AT3G55730.1	1.3e-38	60.48	myb domain protein 109	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 31..80 e-value: 8.9E-17 score: 71.7 coord: 83..131 e-value: 1.9E-14 score: 64.0
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 79..129 score: 9.34939
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 27..78 score: 12.101529
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 86..129 e-value: 2.84438E-11 score: 54.889
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 34..76 e-value: 1.70804E-15 score: 66.0598
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 35..93 e-value: 1.5E-17 score: 63.6
None	No IPR available	GENE3D	1.10.10.60		coord: 85..144 e-value: 5.3E-21 score: 76.4
None	No IPR available	GENE3D	1.10.10.60		coord: 31..83 e-value: 2.0E-22 score: 80.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR45614:SF53	TRANSCRIPTION FACTOR MYB44-LIKE	coord: 2..215
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 2..215
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 84..133 score: 22.51465
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 27..82 score: 27.94058
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 29..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0004322.1	Lag0004322.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding