Lag0004155 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0004155
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	LOB domain-containing protein
Location	chr6: 1461395 .. 1461991 (+)
RNA-Seq Expression	Lag0004155
Synteny	Lag0004155

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATACCGGCCTAGACTGCACCGGAATCTCCGCCGAGGAAGCCGCAATCAAGGACTATAATGTTCATAATCTTCCGCCCACGACTCAGGCCTGCGCCGCGTGTAAATTCCAGAGAAGAAAATGCTCTGCCGATTGTCCTCTGGCTCCGTATTTTCCTGCAAATCGTCTTCAGGACTTCCAAAACGTCCGCAGATTGTTCGGAGTAAAGAACGTCCTCAAAACCCTAGGCGATTTGGATTCTTCGAAGAGATTCAACGCCGCCGAGTGTATGATCTTCGAGGCCAACTGCCGCGCCAAGGATCTCGTCGGTGGATGCTACAGAATCATCGCTACGTTGCAGCGTGAAATCACGCTTATGGAGGCCCAGCGTCGCCTCGTAGTCACTCAGCTCCGAAATTATCGACAGACGGCGGGTTCGCACGGCGGTGCGGTTCTCTCGGAATTCTGCGGAGTTAATTTTGATCGTAAACCGGGGATTTCTGAATCGGCGGTTCTTGAAGATTGGATTCGGAAAGAAGTTTGCAGTTCTTCGAATGAGCGGTTGATTAAGAAGACGAAGAATGAAGTTGATTTCAATTTGCAGGTAAGCCATTAG

mRNA sequence

ATGAATACCGGCCTAGACTGCACCGGAATCTCCGCCGAGGAAGCCGCAATCAAGGACTATAATGTTCATAATCTTCCGCCCACGACTCAGGCCTGCGCCGCGTGTAAATTCCAGAGAAGAAAATGCTCTGCCGATTGTCCTCTGGCTCCGTATTTTCCTGCAAATCGTCTTCAGGACTTCCAAAACGTCCGCAGATTGTTCGGAGTAAAGAACGTCCTCAAAACCCTAGGCGATTTGGATTCTTCGAAGAGATTCAACGCCGCCGAGTGTATGATCTTCGAGGCCAACTGCCGCGCCAAGGATCTCGTCGGTGGATGCTACAGAATCATCGCTACGTTGCAGCGTGAAATCACGCTTATGGAGGCCCAGCGTCGCCTCGTAGTCACTCAGCTCCGAAATTATCGACAGACGGCGGGTTCGCACGGCGGTGCGGTTCTCTCGGAATTCTGCGGAGTTAATTTTGATCGTAAACCGGGGATTTCTGAATCGGCGGTTCTTGAAGATTGGATTCGGAAAGAAGTTTGCAGTTCTTCGAATGAGCGGTTGATTAAGAAGACGAAGAATGAAGTTGATTTCAATTTGCAGGTAAGCCATTAG

Coding sequence (CDS)

ATGAATACCGGCCTAGACTGCACCGGAATCTCCGCCGAGGAAGCCGCAATCAAGGACTATAATGTTCATAATCTTCCGCCCACGACTCAGGCCTGCGCCGCGTGTAAATTCCAGAGAAGAAAATGCTCTGCCGATTGTCCTCTGGCTCCGTATTTTCCTGCAAATCGTCTTCAGGACTTCCAAAACGTCCGCAGATTGTTCGGAGTAAAGAACGTCCTCAAAACCCTAGGCGATTTGGATTCTTCGAAGAGATTCAACGCCGCCGAGTGTATGATCTTCGAGGCCAACTGCCGCGCCAAGGATCTCGTCGGTGGATGCTACAGAATCATCGCTACGTTGCAGCGTGAAATCACGCTTATGGAGGCCCAGCGTCGCCTCGTAGTCACTCAGCTCCGAAATTATCGACAGACGGCGGGTTCGCACGGCGGTGCGGTTCTCTCGGAATTCTGCGGAGTTAATTTTGATCGTAAACCGGGGATTTCTGAATCGGCGGTTCTTGAAGATTGGATTCGGAAAGAAGTTTGCAGTTCTTCGAATGAGCGGTTGATTAAGAAGACGAAGAATGAAGTTGATTTCAATTTGCAGGTAAGCCATTAG

Protein sequence

MNTGLDCTGISAEEAAIKDYNVHNLPPTTQACAACKFQRRKCSADCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLGDLDSSKRFNAAECMIFEANCRAKDLVGGCYRIIATLQREITLMEAQRRLVVTQLRNYRQTAGSHGGAVLSEFCGVNFDRKPGISESAVLEDWIRKEVCSSSNERLIKKTKNEVDFNLQVSH

Homology

[Close]

BLAST of Lag0004155 vs. NCBI nr
Match: XP_038886742.1 (LOB domain-containing protein 22-like [Benincasa hispida])

HSP 1 Score: 211.8 bits (538), Expect = 5.2e-51
Identity = 113/180 (62.78%), Postives = 133/180 (73.89%), Query Frame = 0


Query: 4   GLDCTGISAEEAAIKDYNVHNLPPTTQACAACKFQRRKCSADCPLAPYFPANRLQDFQNV 63
           G DC+G +AEE  +KD    NLP T  ACAACKFQRRKCSADCPLAPYFPA+RLQDFQNV
Sbjct: 5   GGDCSGTAAEEGEVKDNG--NLPST--ACAACKFQRRKCSADCPLAPYFPAHRLQDFQNV 64

Query: 64  RRLFGVKNVLKTLGDLDSSKRFNAAECMIFEANCRAKDLVGGCYRIIATLQREITLMEAQ 123
           R+LFGVKNVLKTL DL+   RF A ECMIFEANCRA DL GGCY+IIA LQ EITL+EAQ
Sbjct: 65  RKLFGVKNVLKTLADLEPDNRFKAVECMIFEANCRASDLAGGCYKIIAKLQSEITLLEAQ 124

Query: 124 RRLVVTQLRNYRQT---AGSHGGAVLSEFCGVNFDRKPGISESAVLEDWIRKEVCSSSNE 181
            R V+ QLR +RQT   A S  G++LSE   ++FD KPG++   +  D++   +    NE
Sbjct: 125 HRAVLRQLRFFRQTTAAAISQRGSILSE---LDFDCKPGLTSLLLDCDYLSDRLNMMENE 177

[Close]

BLAST of Lag0004155 vs. NCBI nr
Match: XP_022962555.1 (LOB domain-containing protein 22-like [Cucurbita moschata])

HSP 1 Score: 204.9 bits (520), Expect = 6.4e-49
Identity = 120/198 (60.61%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 1   MNTGLDCTGISAEEAAIKDYNVHNLPPTTQACAACKFQRRKCSADCPLAPYFPANRLQDF 60
           MN   D +GI A   A  DY   N PPT QACAACKFQRRKC+ADCPLAPYFPA R ++F
Sbjct: 1   MNIHRDFSGIVAGVDA--DYKNQN-PPTMQACAACKFQRRKCTADCPLAPYFPAERFREF 60

Query: 61  QNVRRLFGVKNVLKTLGDLDSSKRFNAAECMIFEANCRAKDLVGGCYRIIATLQREITLM 120
           +NVR+LFGVKNVLKTLGDL+ SKR +A +C+IFEANCRA DL GGCY+IIA +QREITL+
Sbjct: 61  RNVRKLFGVKNVLKTLGDLEPSKRRDAVQCIIFEANCRASDLAGGCYKIIAKMQREITLL 120

Query: 121 EAQRRLVVTQLRNYRQTAGSHGGAVLSEFCGVNFDRKPGISESAVLEDWIRKEVCSSSNE 180
           EAQ RLV+ QLR YRQTA     A+ SEF   +FD           ED IRKE C S NE
Sbjct: 121 EAQHRLVLRQLRFYRQTAAC---AIRSEF---DFD----------FEDRIRKESC-SLNE 177

Query: 181 RLIKKTKNEVDFNLQVSH 199
           RL  + +N V  +  V+H
Sbjct: 181 RLTAR-ENGVCCSKGVTH 177

[Close]

BLAST of Lag0004155 vs. NCBI nr
Match: KAG7029263.1 (LOB domain-containing protein 22, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 204.9 bits (520), Expect = 6.4e-49
Identity = 120/198 (60.61%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 1   MNTGLDCTGISAEEAAIKDYNVHNLPPTTQACAACKFQRRKCSADCPLAPYFPANRLQDF 60
           MN   D +GI A   A  DY   N PPT QACAACKFQRRKC+ADCPLAPYFPA R ++F
Sbjct: 1   MNIHRDFSGIVAGVDA--DYKNQN-PPTMQACAACKFQRRKCTADCPLAPYFPAERFREF 60

Query: 61  QNVRRLFGVKNVLKTLGDLDSSKRFNAAECMIFEANCRAKDLVGGCYRIIATLQREITLM 120
           +NVR+LFGVKNVLKTLGDL+ SKR +A +C+IFEANCRA DL GGCY+IIA +QREITL+
Sbjct: 61  RNVRKLFGVKNVLKTLGDLEPSKRRDAVQCIIFEANCRASDLAGGCYKIIAKMQREITLL 120

Query: 121 EAQRRLVVTQLRNYRQTAGSHGGAVLSEFCGVNFDRKPGISESAVLEDWIRKEVCSSSNE 180
           EAQ RLV+ QLR YRQTA     A+ SEF   +FD           ED IRKE C S NE
Sbjct: 121 EAQHRLVLRQLRFYRQTAAC---AIRSEF-DFDFD----------FEDRIRKESC-SLNE 179

Query: 181 RLIKKTKNEVDFNLQVSH 199
           RL  + +N V  +  V+H
Sbjct: 181 RLTAR-ENGVCCSKGVTH 179

[Close]

BLAST of Lag0004155 vs. NCBI nr
Match: KAG6598292.1 (Fe(2+) transport protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 204.5 bits (519), Expect = 8.3e-49
Identity = 116/182 (63.74%), Postives = 132/182 (72.53%), Query Frame = 0


Query: 1   MNTGLDCTGISAEEAAIKDYNVHNLPPTTQACAACKFQRRKCSADCPLAPYFPANRLQDF 60
           MN   D +GI A   A  DY   N PPT QACAACKFQRRKC+ADCPLAPYFPA R ++F
Sbjct: 1   MNIHRDFSGIVAGVDA--DYKNQN-PPTMQACAACKFQRRKCTADCPLAPYFPAERFREF 60

Query: 61  QNVRRLFGVKNVLKTLGDLDSSKRFNAAECMIFEANCRAKDLVGGCYRIIATLQREITLM 120
           +NVR+LFGVKNVLKTLGDL+ SKR +A +C+IFEANCRA DL GGCY+IIA +QREITL+
Sbjct: 61  RNVRKLFGVKNVLKTLGDLEPSKRRDAVQCIIFEANCRASDLAGGCYKIIAKMQREITLL 120

Query: 121 EAQRRLVVTQLRNYRQTAGSHGGAVLSEFCGVNFDRKPGISESAVLEDWIRKEVCSSSNE 180
           EAQ RLV+ QLR YRQTA     A+ SEF   +FD           ED IRKE C S NE
Sbjct: 121 EAQHRLVLRQLRFYRQTAAC---AIRSEF-DFDFD----------FEDRIRKESC-SLNE 164

Query: 181 RL 183
           RL
Sbjct: 181 RL 164

[Close]

BLAST of Lag0004155 vs. NCBI nr
Match: XP_011650178.1 (LOB domain-containing protein 22 [Cucumis sativus])

HSP 1 Score: 202.6 bits (514), Expect = 3.2e-48
Identity = 115/193 (59.59%), Postives = 131/193 (67.88%), Query Frame = 0


Query: 1   MNTGLDCTGISAEEAAIKDYNVHNLPPTTQ--ACAACKFQRRKCSADCPLAPYFPANRLQ 60
           MN   DCT   A+ A + D    N P TTQ  ACAACKF RRKCS +CPLAPYFPANRLQ
Sbjct: 1   MNILQDCTETVADGAEVMDI---NFPTTTQAPACAACKFHRRKCSVECPLAPYFPANRLQ 60

Query: 61  DFQNVRRLFGVKNVLKTLGDLDSSKRFNAAECMIFEANCRAKDLVGGCYRIIATLQREIT 120
           DF+NVR+LFGVKNVLKTL  LDS  RF AAECMIFEANCRA DLVGGC +II  LQ EI 
Sbjct: 61  DFENVRKLFGVKNVLKTLAGLDSYNRFKAAECMIFEANCRALDLVGGCCQIIPRLQNEIA 120

Query: 121 LMEAQRRLVVTQLRNYRQTAG--SHGGAVLSEFCGVNFDRKPGIS----ESAVLEDWIRK 180
           L+EAQ R ++ QL+  RQTA   S  GA+ SEF   + D K G++    +    EDWIRK
Sbjct: 121 LLEAQHRHILRQLQISRQTAAAISQLGAIPSEF---DSDCKHGLTPLLLDCDYSEDWIRK 180

Query: 181 EVCSSSNERLIKK 186
           E C  +NE    K
Sbjct: 181 EHCDMNNEASFSK 187

[Close]

BLAST of Lag0004155 vs. ExPASy Swiss-Prot
Match: Q9LRW1 (LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.0e-22
Identity = 51/114 (44.74%), Postives = 70/114 (61.40%), Query Frame = 0


Query: 28  TTQACAACKFQRRKCSADCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLGDLDSSKRFNA 87
           T QACAACK+QRRKC+ DC LAPYFP +R + F N  +LFGV N+ K +  L   ++  A
Sbjct: 33  TNQACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLTPPEKDAA 92

Query: 88  AECMIFEANCRAKDLVGGCYRIIATLQREITLMEAQRRLVVTQLRNYRQTAGSH 142
              ++F+++ RA D V GCY II  LQ +I     +  +V+ QL  +R  A  H
Sbjct: 93  MHTIMFQSDARANDPVDGCYGIIKKLQYQIEYTRNELEIVLQQLAMFRDRAHQH 146

[Close]

BLAST of Lag0004155 vs. ExPASy Swiss-Prot
Match: Q9STS6 (LOB domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=LBD27 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-21
Identity = 51/108 (47.22%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 28  TTQACAACKFQRRKCSADCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLGDLDSSKRFNA 87
           T+ ACAACK+QRR+C+ADCPLAPYFPA + + FQNV RLFGV++++K L  LD +++  A
Sbjct: 33  TSGACAACKYQRRRCAADCPLAPYFPAEQPKLFQNVHRLFGVRSIVKILEKLDETQKPEA 92

Query: 88  AECMIFEANCRAKDLVGGCYRIIATLQREITLMEAQRRLVVTQLRNYR 136
            + +IF++  R +  V GC  +   LQ  I   E + + V +QL+ YR
Sbjct: 93  MKSIIFQSYVRDRSPVHGCLGVTQQLQYMIWFAEEELKAVNSQLQLYR 140

[Close]

BLAST of Lag0004155 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.2e-19
Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = 0


Query: 32  CAACKFQRRKCSADCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLGDLDSSKRFNAAECM 91
           CAACK  RR+C+ DC  +PYFPA+  Q F NV R+FG  NV K L +L   +R +A   M
Sbjct: 14  CAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSM 73

Query: 92  IFEANCRAKDLVGGCYRIIATLQREITLMEAQRRLVVTQLRNYR 136
           ++EAN R +D V GC   I++LQ++I +++AQ  L   ++ + R
Sbjct: 74  VYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLR 117

[Close]

BLAST of Lag0004155 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 9.3e-19
Identity = 49/120 (40.83%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 28  TTQACAACKFQRRKCSADCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLGDLDSSKRFNA 87
           T   CAACKF RRKC  DC  APYFP +  Q F +V R+FG  NV K L +L   +R +A
Sbjct: 35  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDA 94

Query: 88  AECMIFEANCRAKDLVGGCYRIIATLQREITLMEAQRRLVVTQLRNYRQTAGSHGGAVLS 147
              + +EA+ R +D V GC  II+ LQR +  ++        +L  Y+Q A +   A  S
Sbjct: 95  VNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASAS 154

[Close]

BLAST of Lag0004155 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 9.3e-19
Identity = 49/120 (40.83%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 28  TTQACAACKFQRRKCSADCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLGDLDSSKRFNA 87
           T   CAACKF RRKC  DC  APYFP +  Q F +V R+FG  NV K L +L   +R +A
Sbjct: 35  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDA 94

Query: 88  AECMIFEANCRAKDLVGGCYRIIATLQREITLMEAQRRLVVTQLRNYRQTAGSHGGAVLS 147
              + +EA+ R +D V GC  II+ LQR +  ++        +L  Y+Q A +   A  S
Sbjct: 95  VNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASAS 154

[Close]

BLAST of Lag0004155 vs. ExPASy TrEMBL
Match: A0A6J1HFG0 (LOB domain-containing protein 22-like OS=Cucurbita moschata OX=3662 GN=LOC111462953 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 3.1e-49
Identity = 120/198 (60.61%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 1   MNTGLDCTGISAEEAAIKDYNVHNLPPTTQACAACKFQRRKCSADCPLAPYFPANRLQDF 60
           MN   D +GI A   A  DY   N PPT QACAACKFQRRKC+ADCPLAPYFPA R ++F
Sbjct: 1   MNIHRDFSGIVAGVDA--DYKNQN-PPTMQACAACKFQRRKCTADCPLAPYFPAERFREF 60

Query: 61  QNVRRLFGVKNVLKTLGDLDSSKRFNAAECMIFEANCRAKDLVGGCYRIIATLQREITLM 120
           +NVR+LFGVKNVLKTLGDL+ SKR +A +C+IFEANCRA DL GGCY+IIA +QREITL+
Sbjct: 61  RNVRKLFGVKNVLKTLGDLEPSKRRDAVQCIIFEANCRASDLAGGCYKIIAKMQREITLL 120

Query: 121 EAQRRLVVTQLRNYRQTAGSHGGAVLSEFCGVNFDRKPGISESAVLEDWIRKEVCSSSNE 180
           EAQ RLV+ QLR YRQTA     A+ SEF   +FD           ED IRKE C S NE
Sbjct: 121 EAQHRLVLRQLRFYRQTAAC---AIRSEF---DFD----------FEDRIRKESC-SLNE 177

Query: 181 RLIKKTKNEVDFNLQVSH 199
           RL  + +N V  +  V+H
Sbjct: 181 RLTAR-ENGVCCSKGVTH 177

[Close]

BLAST of Lag0004155 vs. ExPASy TrEMBL
Match: A0A0A0LNK6 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G351680 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.5e-48
Identity = 115/193 (59.59%), Postives = 131/193 (67.88%), Query Frame = 0


Query: 1   MNTGLDCTGISAEEAAIKDYNVHNLPPTTQ--ACAACKFQRRKCSADCPLAPYFPANRLQ 60
           MN   DCT   A+ A + D    N P TTQ  ACAACKF RRKCS +CPLAPYFPANRLQ
Sbjct: 1   MNILQDCTETVADGAEVMDI---NFPTTTQAPACAACKFHRRKCSVECPLAPYFPANRLQ 60

Query: 61  DFQNVRRLFGVKNVLKTLGDLDSSKRFNAAECMIFEANCRAKDLVGGCYRIIATLQREIT 120
           DF+NVR+LFGVKNVLKTL  LDS  RF AAECMIFEANCRA DLVGGC +II  LQ EI 
Sbjct: 61  DFENVRKLFGVKNVLKTLAGLDSYNRFKAAECMIFEANCRALDLVGGCCQIIPRLQNEIA 120

Query: 121 LMEAQRRLVVTQLRNYRQTAG--SHGGAVLSEFCGVNFDRKPGIS----ESAVLEDWIRK 180
           L+EAQ R ++ QL+  RQTA   S  GA+ SEF   + D K G++    +    EDWIRK
Sbjct: 121 LLEAQHRHILRQLQISRQTAAAISQLGAIPSEF---DSDCKHGLTPLLLDCDYSEDWIRK 180

Query: 181 EVCSSSNERLIKK 186
           E C  +NE    K
Sbjct: 181 EHCDMNNEASFSK 187

[Close]

BLAST of Lag0004155 vs. ExPASy TrEMBL
Match: A0A6J1K5C4 (LOB domain-containing protein 22-like OS=Cucurbita maxima OX=3661 GN=LOC111492440 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 3.4e-48
Identity = 119/198 (60.10%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 1   MNTGLDCTGISAEEAAIKDYNVHNLPPTTQACAACKFQRRKCSADCPLAPYFPANRLQDF 60
           MN   D +GI A   A  DY   NL PT QACAACKFQRRKC+ADCPLAPYFPA+R ++F
Sbjct: 1   MNIHRDFSGIVAGVDA--DYKNLNL-PTMQACAACKFQRRKCTADCPLAPYFPADRFREF 60

Query: 61  QNVRRLFGVKNVLKTLGDLDSSKRFNAAECMIFEANCRAKDLVGGCYRIIATLQREITLM 120
           +NVR+LFGVKNVLKTLGDL+ SKR +A +C+IFEANCRA DL GGCY+IIA +QREITL+
Sbjct: 61  RNVRKLFGVKNVLKTLGDLEPSKRRDAVQCIIFEANCRANDLAGGCYKIIAKMQREITLL 120

Query: 121 EAQRRLVVTQLRNYRQTAGSHGGAVLSEFCGVNFDRKPGISESAVLEDWIRKEVCSSSNE 180
           EAQ RLV+ QLR +RQTA     A+ SEF   +FD           ED IRKE C S NE
Sbjct: 121 EAQHRLVLRQLRFFRQTAAC---AIRSEF-DFDFD----------FEDRIRKESC-SLNE 179

Query: 181 RLIKKTKNEVDFNLQVSH 199
           RL    +N V  +  V+H
Sbjct: 181 RL-TTMENGVSCSKGVTH 179

[Close]

BLAST of Lag0004155 vs. ExPASy TrEMBL
Match: A0A5A7V0Z4 (LOB domain-containing protein 22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001350 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.7e-45
Identity = 108/199 (54.27%), Postives = 129/199 (64.82%), Query Frame = 0


Query: 1   MNTGLDCTGISAEEAAIKDYNVHNLPPTTQ-----ACAACKFQRRKCSADCPLAPYFPAN 60
           MN   DCT  SA+   +KD   +N P   Q     ACAACKF RRKCS +CPLAPYFPAN
Sbjct: 1   MNIRQDCTETSADGGEVKD---NNFPTKIQAAAAAACAACKFHRRKCSVECPLAPYFPAN 60

Query: 61  RLQDFQNVRRLFGVKNVLKTLGDLDSSKRFNAAECMIFEANCRAKDLVGGCYRIIATLQR 120
           RL+DF+NVR+LFGVKNVLK L  L+   RF A ECMIFEANCRA DL GGCY+II+ LQ 
Sbjct: 61  RLRDFENVRKLFGVKNVLKILAGLEPDNRFKAVECMIFEANCRAIDLAGGCYKIISKLQS 120

Query: 121 EITLMEAQRRLVVTQLRNYRQTAG--SHGGAVLSEFCGVNFDRKPGIS----ESAVLEDW 180
           EI L+EAQ RL++ QL+  RQTA   S  GA+ SEF   + D K G++    +    EDW
Sbjct: 121 EIALLEAQHRLILHQLQISRQTAAAISQRGAIRSEF---DSDCKHGLTSLLLDCDCSEDW 180

Query: 181 IRKEVCSSSNERLIKKTKN 189
           IRKE  + +     K   N
Sbjct: 181 IRKEYFNLNEASFSKALTN 193

[Close]

BLAST of Lag0004155 vs. ExPASy TrEMBL
Match: A0A1S3B9X0 (LOB domain-containing protein 22-like OS=Cucumis melo OX=3656 GN=LOC103487781 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 3.5e-45
Identity = 106/196 (54.08%), Postives = 126/196 (64.29%), Query Frame = 0


Query: 1   MNTGLDCTGISAEEAAIKDYNVHN--LPPTTQACAACKFQRRKCSADCPLAPYFPANRLQ 60
           MN   DCT  SA+   +KD N           ACAACKF RRKCS +CPLAPYFPANRL+
Sbjct: 1   MNIRQDCTETSADGGEVKDINFPTKIQAAAAAACAACKFHRRKCSVECPLAPYFPANRLR 60

Query: 61  DFQNVRRLFGVKNVLKTLGDLDSSKRFNAAECMIFEANCRAKDLVGGCYRIIATLQREIT 120
           DF+NVR+LFGVKNVLK L  L+   RF A ECMIFEANCRA DL GGCY+II+ LQ EI 
Sbjct: 61  DFENVRKLFGVKNVLKILAGLEPDNRFKAVECMIFEANCRAIDLAGGCYKIISKLQSEIA 120

Query: 121 LMEAQRRLVVTQLRNYRQTAG--SHGGAVLSEFCGVNFDRKPGIS----ESAVLEDWIRK 180
           L+EAQ RL++ QL+  RQTA   S  GA+ SEF   + D K G++    +    EDWIRK
Sbjct: 121 LLEAQHRLILHQLQISRQTAAAISQRGAIRSEF---DSDCKHGLTSLLLDCDCSEDWIRK 180

Query: 181 EVCSSSNERLIKKTKN 189
           E  + +     K   N
Sbjct: 181 EYFNLNEASFSKALTN 193

[Close]

BLAST of Lag0004155 vs. TAIR 10
Match: AT3G13850.1 (LOB domain-containing protein 22 )

HSP 1 Score: 105.1 bits (261), Expect = 6.4e-23
Identity = 51/114 (44.74%), Postives = 70/114 (61.40%), Query Frame = 0


Query: 28  TTQACAACKFQRRKCSADCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLGDLDSSKRFNA 87
           T QACAACK+QRRKC+ DC LAPYFP +R + F N  +LFGV N+ K +  L   ++  A
Sbjct: 33  TNQACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLTPPEKDAA 92

Query: 88  AECMIFEANCRAKDLVGGCYRIIATLQREITLMEAQRRLVVTQLRNYRQTAGSH 142
              ++F+++ RA D V GCY II  LQ +I     +  +V+ QL  +R  A  H
Sbjct: 93  MHTIMFQSDARANDPVDGCYGIIKKLQYQIEYTRNELEIVLQQLAMFRDRAHQH 146

[Close]

BLAST of Lag0004155 vs. TAIR 10
Match: AT3G47870.1 (LOB domain-containing protein 27 )

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-22
Identity = 51/108 (47.22%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 28  TTQACAACKFQRRKCSADCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLGDLDSSKRFNA 87
           T+ ACAACK+QRR+C+ADCPLAPYFPA + + FQNV RLFGV++++K L  LD +++  A
Sbjct: 33  TSGACAACKYQRRRCAADCPLAPYFPAEQPKLFQNVHRLFGVRSIVKILEKLDETQKPEA 92

Query: 88  AECMIFEANCRAKDLVGGCYRIIATLQREITLMEAQRRLVVTQLRNYR 136
            + +IF++  R +  V GC  +   LQ  I   E + + V +QL+ YR
Sbjct: 93  MKSIIFQSYVRDRSPVHGCLGVTQQLQYMIWFAEEELKAVNSQLQLYR 140

[Close]

BLAST of Lag0004155 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-20
Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = 0


Query: 32  CAACKFQRRKCSADCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLGDLDSSKRFNAAECM 91
           CAACK  RR+C+ DC  +PYFPA+  Q F NV R+FG  NV K L +L   +R +A   M
Sbjct: 14  CAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSM 73

Query: 92  IFEANCRAKDLVGGCYRIIATLQREITLMEAQRRLVVTQLRNYR 136
           ++EAN R +D V GC   I++LQ++I +++AQ  L   ++ + R
Sbjct: 74  VYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLR 117

[Close]

BLAST of Lag0004155 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-19
Identity = 50/124 (40.32%), Postives = 66/124 (53.23%), Query Frame = 0


Query: 28  TTQACAACKFQRRKCSADCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLGDLDSSKRFNA 87
           T   CAACKF RRKC++DC  APYFP      F NV R+FG  NV K L ++   +R +A
Sbjct: 36  TNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDA 95

Query: 88  AECMIFEANCRAKDLVGGCYRIIATLQREITLMEAQRRLVVTQLRNYRQTAGSHGGAVLS 147
              + +EA  R KD V GC   I+ LQR++  ++ +       L  Y   AG  GG   S
Sbjct: 96  VNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRY---AGCLGGETTS 155

Query: 148 EFCG 152
            + G
Sbjct: 156 AYGG 156

[Close]

BLAST of Lag0004155 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 92.8 bits (229), Expect = 3.3e-19
Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 28  TTQACAACKFQRRKCSADCPLAPYFPANRLQDFQNVRRLFGVKNVLKTLGDLDSSKRFNA 87
           T   CAACKF RRKC  +C  APYFP ++ Q F NV ++FG  NV K L +L  S+R +A
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 88  AECMIFEANCRAKDLVGGCYRIIATLQREITLMEAQRRLVVTQLRNYR 136
              + +EA+ R +D V GC  +I+ LQ ++  ++       ++L  Y+
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQ 113

The following BLAST results are available for this feature:

BLAST of Lag0004155 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886742.1	5.2e-51	62.78	LOB domain-containing protein 22-like [Benincasa hispida]	[more]
XP_022962555.1	6.4e-49	60.61	LOB domain-containing protein 22-like [Cucurbita moschata]	[more]
KAG7029263.1	6.4e-49	60.61	LOB domain-containing protein 22, partial [Cucurbita argyrosperma subsp. argyros...	[more]
KAG6598292.1	8.3e-49	63.74	Fe(2+) transport protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp...	[more]
XP_011650178.1	3.2e-48	59.59	LOB domain-containing protein 22 [Cucumis sativus]	[more]

BLAST of Lag0004155 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRW1	9.0e-22	44.74	LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 S...	[more]
Q9STS6	1.5e-21	47.22	LOB domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=LBD27 PE=1 S...	[more]
Q9SHE9	3.2e-19	44.23	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
A2WXT0	9.3e-19	40.83	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]
Q8LQH4	9.3e-19	40.83	LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6...	[more]

BLAST of Lag0004155 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFG0	3.1e-49	60.61	LOB domain-containing protein 22-like OS=Cucurbita moschata OX=3662 GN=LOC111462...	[more]
A0A0A0LNK6	1.5e-48	59.59	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G351680 PE=3 SV...	[more]
A0A6J1K5C4	3.4e-48	60.10	LOB domain-containing protein 22-like OS=Cucurbita maxima OX=3661 GN=LOC11149244...	[more]
A0A5A7V0Z4	2.7e-45	54.27	LOB domain-containing protein 22-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B9X0	3.5e-45	54.08	LOB domain-containing protein 22-like OS=Cucumis melo OX=3656 GN=LOC103487781 PE...	[more]

BLAST of Lag0004155 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13850.1	6.4e-23	44.74	LOB domain-containing protein 22	[more]
AT3G47870.1	1.1e-22	47.22	LOB domain-containing protein 27	[more]
AT1G31320.1	2.3e-20	44.23	LOB domain-containing protein 4	[more]
AT3G27650.1	1.1e-19	40.32	LOB domain-containing protein 25	[more]
AT1G65620.1	3.3e-19	39.81	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 31..125 e-value: 7.4E-32 score: 109.9
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 30..131 score: 22.120344
None	No IPR available	PANTHER	PTHR31301:SF21	LOB DOMAIN-CONTAINING PROTEIN 27-RELATED	coord: 27..140
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 27..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0004155.1	Lag0004155.1	mRNA