Lag0004152 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACCGCTGCACAAACGACGTCGTGTTCTCGGAATTCCCTCCCTCTCCGACCTCTTCTTCTTCGCTATCGATCGACGTGGATGAATCATCTGAAACTCGGATCCGGCGGCTGATTACAGAGCATCCGGTGATCATCTTCAGCCGGTCGTCCTGCAGCATGTGCCACGTCATGAAGACGCTCCTCGCCACCATCGGCGTCCACCCCACCGTCATCGAACTCGACGAGCACGACGAAATCGCCGCCGTTCCTTCTTCGTCATTTGTTCAGGACAGTTCGGCGCCGGCGGTTTTCATCGGCGGCGCTAGCTTCGGCGGCTTGGAGACTCTTGTTGCTCTCCATCTCAGCGGCCATCTCGTTCCTAAACTCATCGAAGTTGGCGCTCTCCCGGTATGA ATGCACCGCTGCACAAACGACGTCGTGTTCTCGGAATTCCCTCCCTCTCCGACCTCTTCTTCTTCGCTATCGATCGACGTGGATGAATCATCTGAAACTCGGATCCGGCGGCTGATTACAGAGCATCCGGTGATCATCTTCAGCCGGTCGTCCTGCAGCATGTGCCACGTCATGAAGACGCTCCTCGCCACCATCGGCGTCCACCCCACCGTCATCGAACTCGACGAGCACGACGAAATCGCCGCCGTTCCTTCTTCGTCATTTGTTCAGGACAGTTCGGCGCCGGCGGTTTTCATCGGCGGCGCTAGCTTCGGCGGCTTGGAGACTCTTGTTGCTCTCCATCTCAGCGGCCATCTCGTTCCTAAACTCATCGAAGTTGGCGCTCTCCCGGTATGA ATGCACCGCTGCACAAACGACGTCGTGTTCTCGGAATTCCCTCCCTCTCCGACCTCTTCTTCTTCGCTATCGATCGACGTGGATGAATCATCTGAAACTCGGATCCGGCGGCTGATTACAGAGCATCCGGTGATCATCTTCAGCCGGTCGTCCTGCAGCATGTGCCACGTCATGAAGACGCTCCTCGCCACCATCGGCGTCCACCCCACCGTCATCGAACTCGACGAGCACGACGAAATCGCCGCCGTTCCTTCTTCGTCATTTGTTCAGGACAGTTCGGCGCCGGCGGTTTTCATCGGCGGCGCTAGCTTCGGCGGCTTGGAGACTCTTGTTGCTCTCCATCTCAGCGGCCATCTCGTTCCTAAACTCATCGAAGTTGGCGCTCTCCCGGTATGA MHRCTNDVVFSEFPPSPTSSSSLSIDVDESSETRIRRLITEHPVIIFSRSSCSMCHVMKTLLATIGVHPTVIELDEHDEIAAVPSSSFVQDSSAPAVFIGGASFGGLETLVALHLSGHLVPKLIEVGALPV Homology
BLAST of Lag0004152 vs. NCBI nr
Match: XP_038885533.1 (glutaredoxin-C6-like isoform X1 [Benincasa hispida]) HSP 1 Score: 239.2 bits (609), Expect = 2.0e-59 Identity = 122/131 (93.13%), Postives = 127/131 (96.95%), Query Frame = 0
BLAST of Lag0004152 vs. NCBI nr
Match: XP_038885534.1 (glutaredoxin-C6-like isoform X2 [Benincasa hispida]) HSP 1 Score: 238.0 bits (606), Expect = 4.5e-59 Identity = 121/130 (93.08%), Postives = 126/130 (96.92%), Query Frame = 0
BLAST of Lag0004152 vs. NCBI nr
Match: XP_004142929.1 (glutaredoxin-C6 [Cucumis sativus] >KGN62384.1 hypothetical protein Csa_018651 [Cucumis sativus]) HSP 1 Score: 235.0 bits (598), Expect = 3.8e-58 Identity = 121/131 (92.37%), Postives = 126/131 (96.18%), Query Frame = 0
BLAST of Lag0004152 vs. NCBI nr
Match: KAA0061003.1 (glutaredoxin-C6-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57 Identity = 121/131 (92.37%), Postives = 125/131 (95.42%), Query Frame = 0
BLAST of Lag0004152 vs. NCBI nr
Match: XP_008444458.1 (PREDICTED: glutaredoxin-C6-like isoform X2 [Cucumis melo]) HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57 Identity = 121/131 (92.37%), Postives = 125/131 (95.42%), Query Frame = 0
BLAST of Lag0004152 vs. ExPASy Swiss-Prot
Match: Q8L9S3 (Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2) HSP 1 Score: 151.4 bits (381), Expect = 7.2e-36 Identity = 88/139 (63.31%), Postives = 108/139 (77.70%), Query Frame = 0
BLAST of Lag0004152 vs. ExPASy Swiss-Prot
Match: Q29PZ1 (Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 4.5e-30 Identity = 77/147 (52.38%), Postives = 101/147 (68.71%), Query Frame = 0
BLAST of Lag0004152 vs. ExPASy Swiss-Prot
Match: Q0DK35 (Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 4.6e-22 Identity = 57/101 (56.44%), Postives = 70/101 (69.31%), Query Frame = 0
BLAST of Lag0004152 vs. ExPASy Swiss-Prot
Match: Q5SMY5 (Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 3.1e-18 Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = 0
BLAST of Lag0004152 vs. ExPASy Swiss-Prot
Match: Q9SGP6 (Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 4.9e-16 Identity = 49/113 (43.36%), Postives = 71/113 (62.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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