Lag0004109 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0004109
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionDamaged dna-binding 2, putative isoform 1
Locationchr6: 1174141 .. 1175002 (+)
RNA-Seq ExpressionLag0004109
SyntenyLag0004109
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAATTGCTTTGGAGAGCAACAACAGGATTCCGCCGTCGGTTTTCTCTCAAGGCGGCTTGCCGTCGTATTGTTCCGTCTTGAATACCACGGGAATTATTCCGGTAGTCCGACGAGAGACTGCCGTTGGTGATGTGGTGGCGCCGGCCGAGGAGGTGGATAGATGCAGTTCGTCTTCGTCGTCGTCGATTGGGGAAAACAGCGGTTTATCTGTTAGATCGTTGGATAATGACGACGAGGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAATCGTTGGAGGAAGTTTTGCCTATCAGGTTAGCGATTGTAATTTGTTTTTTGTTCTTCGTAATCTTCTTTTTCTTCCTCTTCTTCTCCTGGTTTCTAGATTTAGGGAAACTCGATCGATCGCCTTTCGATTTCGTTTTTTGGAACTTTTAACAACGAGATTCCGCTGAATTTAACAATTGAGATCATCTTGTGTATTTGCAGGAGAGGAATTTCAAATTTCTACAACGGAAAATCGAAATCCTTCACGAGCCTGGCAGAGGCTTCCTCAACGGCCTCCATTAAAGACATAGCAAAGCCTGAGAATGCCTTCTCTCGGAAACGGAGAAATCTTCTTGCATCCAATCTCATCGCCGGCGGCATATCGAAGCGACCGATTAGTTCAAGCCGAAGCTCGTTGGCGCTGGCCGTCGCCATGAGTGGTTCTGAAAGCGATCTGAATTCGAGATTGCCTCCGCCGATTCGACCTCCATTGCACCCCAACGGACGCGCATCTCGCTCCAATTTAGGTTCTGCAGTTCCTCTTCTCTGTAAATACCCCACTTGGCGATCATATTCCTTGGCCGATATTCAGTAG

mRNA sequence

ATGTCAATTGCTTTGGAGAGCAACAACAGGATTCCGCCGTCGGTTTTCTCTCAAGGCGGCTTGCCGTCGTATTGTTCCGTCTTGAATACCACGGGAATTATTCCGGTAGTCCGACGAGAGACTGCCGTTGGTGATGTGGTGGCGCCGGCCGAGGAGGTGGATAGATGCAGTTCGTCTTCGTCGTCGTCGATTGGGGAAAACAGCGGTTTATCTGTTAGATCGTTGGATAATGACGACGAGGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAATCGTTGGAGGAAGTTTTGCCTATCAGGAGAGGAATTTCAAATTTCTACAACGGAAAATCGAAATCCTTCACGAGCCTGGCAGAGGCTTCCTCAACGGCCTCCATTAAAGACATAGCAAAGCCTGAGAATGCCTTCTCTCGGAAACGGAGAAATCTTCTTGCATCCAATCTCATCGCCGGCGGCATATCGAAGCGACCGATTAGTTCAAGCCGAAGCTCGTTGGCGCTGGCCGTCGCCATGAGTGGTTCTGAAAGCGATCTGAATTCGAGATTGCCTCCGCCGATTCGACCTCCATTGCACCCCAACGGACGCGCATCTCGCTCCAATTTAGGTTCTGCAGTTCCTCTTCTCTGTAAATACCCCACTTGGCGATCATATTCCTTGGCCGATATTCAGTAG

Coding sequence (CDS)

ATGTCAATTGCTTTGGAGAGCAACAACAGGATTCCGCCGTCGGTTTTCTCTCAAGGCGGCTTGCCGTCGTATTGTTCCGTCTTGAATACCACGGGAATTATTCCGGTAGTCCGACGAGAGACTGCCGTTGGTGATGTGGTGGCGCCGGCCGAGGAGGTGGATAGATGCAGTTCGTCTTCGTCGTCGTCGATTGGGGAAAACAGCGGTTTATCTGTTAGATCGTTGGATAATGACGACGAGGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAATCGTTGGAGGAAGTTTTGCCTATCAGGAGAGGAATTTCAAATTTCTACAACGGAAAATCGAAATCCTTCACGAGCCTGGCAGAGGCTTCCTCAACGGCCTCCATTAAAGACATAGCAAAGCCTGAGAATGCCTTCTCTCGGAAACGGAGAAATCTTCTTGCATCCAATCTCATCGCCGGCGGCATATCGAAGCGACCGATTAGTTCAAGCCGAAGCTCGTTGGCGCTGGCCGTCGCCATGAGTGGTTCTGAAAGCGATCTGAATTCGAGATTGCCTCCGCCGATTCGACCTCCATTGCACCCCAACGGACGCGCATCTCGCTCCAATTTAGGTTCTGCAGTTCCTCTTCTCTGTAAATACCCCACTTGGCGATCATATTCCTTGGCCGATATTCAGTAG

Protein sequence

MSIALESNNRIPPSVFSQGGLPSYCSVLNTTGIIPVVRRETAVGDVVAPAEEVDRCSSSSSSSIGENSGLSVRSLDNDDEEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLAEASSTASIKDIAKPENAFSRKRRNLLASNLIAGGISKRPISSSRSSLALAVAMSGSESDLNSRLPPPIRPPLHPNGRASRSNLGSAVPLLCKYPTWRSYSLADIQ
Homology
BLAST of Lag0004109 vs. NCBI nr
Match: XP_022131782.1 (uncharacterized protein LOC111004861 [Momordica charantia])

HSP 1 Score: 381.3 bits (978), Expect = 5.7e-102
Identity = 207/233 (88.84%), Postives = 217/233 (93.13%), Query Frame = 0

Query: 1   MSIALESNNRIPPSVFSQGGLPSYCSVLNTTGIIPVVRRETAVGDVVAPAEEVDRCSSSS 60
           MSIAL+ N+RIPPSVFSQGGLPSYCSVLNT GIIPVVRRE AVGD VAPAEE+DRCSSSS
Sbjct: 1   MSIALDRNSRIPPSVFSQGGLPSYCSVLNTAGIIPVVRREAAVGDAVAPAEELDRCSSSS 60

Query: 61  SSSIGENSGLSVRSLDNDDE-EDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSF 120
           SSSIGENSGLSV+S DNDD+ E+NEAESSYKGPLGMESLEEVLP+RRGISNFYNGKSKSF
Sbjct: 61  SSSIGENSGLSVKSSDNDDDGENNEAESSYKGPLGMESLEEVLPMRRGISNFYNGKSKSF 120

Query: 121 TSLAEASSTASIKDIAKPENAFSRKRRNLLASNLIAGGISKRPISSSRSSLALAVAM--S 180
           TSLAEASS A+IKDIAKPENA+SRKRRNLLASNLIAGGISKRPISSSRSSLALAVAM  S
Sbjct: 121 TSLAEASSAATIKDIAKPENAYSRKRRNLLASNLIAGGISKRPISSSRSSLALAVAMYTS 180

Query: 181 GSES--DLNSRLPPPIRPPLHPNGRASRSNLGSAVPLLCKYPTWRSYSLADIQ 229
           GS S  DLNSR PPPIRPPLHPNGR+SRSNL S V LLCKYPTWRSYSLADIQ
Sbjct: 181 GSHSSDDLNSRSPPPIRPPLHPNGRSSRSNLASTVHLLCKYPTWRSYSLADIQ 233

BLAST of Lag0004109 vs. NCBI nr
Match: XP_022962518.1 (uncharacterized protein LOC111462922 [Cucurbita moschata] >KAG6598596.1 hypothetical protein SDJN03_08374, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029529.1 hypothetical protein SDJN02_07868 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365.2 bits (936), Expect = 4.2e-97
Identity = 201/233 (86.27%), Postives = 210/233 (90.13%), Query Frame = 0

Query: 1   MSIALESNNRIPPSVFSQGGLPSYCSVLNTTGIIPVVRRETAVGDVVAPAEEVDRCSSSS 60
           MSIALESN+RIPPSVFSQG LPSYCSVLNTTG+IPVVRRE  VGDVVAPAE VDRCSSSS
Sbjct: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEVVDRCSSSS 60

Query: 61  SSSIGENSGLSVRSLDNDDEEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENS  SVRS+++DD EDNEAESSYK  LGMESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLAEASSTASIKDIAKPENAFSRKRRNLLASNLIAGGISKRPISSSR-SSLALAVAMSGS 180
           SL +ASST+SIKDIAKPENAFSRKRRNLLASNLIAGGISKRPI SSR SSLALAV MS S
Sbjct: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180

Query: 181 E----SDLNSRLPPPIRPPLHPNGRASRSNLGSAVPLLCKYPTWRSYSLADIQ 229
           E     DLNSRL P IRPPLHP GRASRSN GSAVPLLCK+PTWRSYSLA+IQ
Sbjct: 181 ERQSGEDLNSRLSPTIRPPLHPKGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 233

BLAST of Lag0004109 vs. NCBI nr
Match: XP_023547301.1 (uncharacterized protein LOC111806162 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 364.0 bits (933), Expect = 9.4e-97
Identity = 200/233 (85.84%), Postives = 210/233 (90.13%), Query Frame = 0

Query: 1   MSIALESNNRIPPSVFSQGGLPSYCSVLNTTGIIPVVRRETAVGDVVAPAEEVDRCSSSS 60
           MSIALESN+RIPPSVFSQG LPSYCSVLNTTG+IPVVRR+  VGDVVAPAE VDRCSSSS
Sbjct: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRRDAVVGDVVAPAEVVDRCSSSS 60

Query: 61  SSSIGENSGLSVRSLDNDDEEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENS  SVRS+++DD EDNEAESSYK  LGMESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLAEASSTASIKDIAKPENAFSRKRRNLLASNLIAGGISKRPISSSR-SSLALAVAMSGS 180
           SL +ASST+SIKDIAKPENAFSRKRRNLLASNLIAGGISKRPI SSR SSLALAV MS S
Sbjct: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180

Query: 181 E----SDLNSRLPPPIRPPLHPNGRASRSNLGSAVPLLCKYPTWRSYSLADIQ 229
           E     DLNSRL P IRPPLHP GRASRSN GSAVPLLCK+PTWRSYSLA+IQ
Sbjct: 181 ERQSGEDLNSRLSPTIRPPLHPKGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 233

BLAST of Lag0004109 vs. NCBI nr
Match: KAA0064705.1 (Damaged dna-binding 2, putative isoform 1 [Cucumis melo var. makuwa] >TYK00723.1 Damaged dna-binding 2, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 364.0 bits (933), Expect = 9.4e-97
Identity = 201/235 (85.53%), Postives = 212/235 (90.21%), Query Frame = 0

Query: 1   MSIALESNNRIPPSVFSQGGLPSYCSVLNTTGIIPVVRRETAVGDVVAPAEEVDRCSSSS 60
           MSIALESN RIPPSVFSQ GLP YCSVLNTTGIIPVVRRE AV D VAP E+VDRCSSSS
Sbjct: 1   MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAP-EDVDRCSSSS 60

Query: 61  SSSIGENSGLSVRSLDNDDEEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENSG SVRS DNDD EDNEAESSY+GPLGMESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLAEASSTASIKDIAKPENAFSRKRRNLLASNLIAGGISKRP-ISSSRSSLALAVAMSGS 180
           SLA+ASS++SIK+IAKPENAFSRKRRNLLASNLIAGGISKRP ISSSRSSLALAV +S S
Sbjct: 121 SLADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSS 180

Query: 181 ES----DLNSRLPP--PIRPPLHPNGRASRSNLGSAVPLLCKYPTWRSYSLADIQ 229
           ES    DLNS +PP  PIRPPLHPNGRASR N GSAVP LCK+PTWRSYS+A+IQ
Sbjct: 181 ESHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 234

BLAST of Lag0004109 vs. NCBI nr
Match: XP_008445543.1 (PREDICTED: uncharacterized protein LOC103488525 [Cucumis melo])

HSP 1 Score: 364.0 bits (933), Expect = 9.4e-97
Identity = 201/235 (85.53%), Postives = 212/235 (90.21%), Query Frame = 0

Query: 1   MSIALESNNRIPPSVFSQGGLPSYCSVLNTTGIIPVVRRETAVGDVVAPAEEVDRCSSSS 60
           MSIALESN RIPPSVFSQ GLP YCSVLNTTGIIPVVRRE AV D VAP E+VDRCSSSS
Sbjct: 36  MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAP-EDVDRCSSSS 95

Query: 61  SSSIGENSGLSVRSLDNDDEEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENSG SVRS DNDD EDNEAESSY+GPLGMESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 96  SSSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFT 155

Query: 121 SLAEASSTASIKDIAKPENAFSRKRRNLLASNLIAGGISKRP-ISSSRSSLALAVAMSGS 180
           SLA+ASS++SIK+IAKPENAFSRKRRNLLASNLIAGGISKRP ISSSRSSLALAV +S S
Sbjct: 156 SLADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSS 215

Query: 181 ES----DLNSRLPP--PIRPPLHPNGRASRSNLGSAVPLLCKYPTWRSYSLADIQ 229
           ES    DLNS +PP  PIRPPLHPNGRASR N GSAVP LCK+PTWRSYS+A+IQ
Sbjct: 216 ESHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 269

BLAST of Lag0004109 vs. ExPASy TrEMBL
Match: A0A6J1BS00 (uncharacterized protein LOC111004861 OS=Momordica charantia OX=3673 GN=LOC111004861 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.8e-102
Identity = 207/233 (88.84%), Postives = 217/233 (93.13%), Query Frame = 0

Query: 1   MSIALESNNRIPPSVFSQGGLPSYCSVLNTTGIIPVVRRETAVGDVVAPAEEVDRCSSSS 60
           MSIAL+ N+RIPPSVFSQGGLPSYCSVLNT GIIPVVRRE AVGD VAPAEE+DRCSSSS
Sbjct: 1   MSIALDRNSRIPPSVFSQGGLPSYCSVLNTAGIIPVVRREAAVGDAVAPAEELDRCSSSS 60

Query: 61  SSSIGENSGLSVRSLDNDDE-EDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSF 120
           SSSIGENSGLSV+S DNDD+ E+NEAESSYKGPLGMESLEEVLP+RRGISNFYNGKSKSF
Sbjct: 61  SSSIGENSGLSVKSSDNDDDGENNEAESSYKGPLGMESLEEVLPMRRGISNFYNGKSKSF 120

Query: 121 TSLAEASSTASIKDIAKPENAFSRKRRNLLASNLIAGGISKRPISSSRSSLALAVAM--S 180
           TSLAEASS A+IKDIAKPENA+SRKRRNLLASNLIAGGISKRPISSSRSSLALAVAM  S
Sbjct: 121 TSLAEASSAATIKDIAKPENAYSRKRRNLLASNLIAGGISKRPISSSRSSLALAVAMYTS 180

Query: 181 GSES--DLNSRLPPPIRPPLHPNGRASRSNLGSAVPLLCKYPTWRSYSLADIQ 229
           GS S  DLNSR PPPIRPPLHPNGR+SRSNL S V LLCKYPTWRSYSLADIQ
Sbjct: 181 GSHSSDDLNSRSPPPIRPPLHPNGRSSRSNLASTVHLLCKYPTWRSYSLADIQ 233

BLAST of Lag0004109 vs. ExPASy TrEMBL
Match: A0A6J1HF10 (uncharacterized protein LOC111462922 OS=Cucurbita moschata OX=3662 GN=LOC111462922 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.1e-97
Identity = 201/233 (86.27%), Postives = 210/233 (90.13%), Query Frame = 0

Query: 1   MSIALESNNRIPPSVFSQGGLPSYCSVLNTTGIIPVVRRETAVGDVVAPAEEVDRCSSSS 60
           MSIALESN+RIPPSVFSQG LPSYCSVLNTTG+IPVVRRE  VGDVVAPAE VDRCSSSS
Sbjct: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEVVDRCSSSS 60

Query: 61  SSSIGENSGLSVRSLDNDDEEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENS  SVRS+++DD EDNEAESSYK  LGMESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLAEASSTASIKDIAKPENAFSRKRRNLLASNLIAGGISKRPISSSR-SSLALAVAMSGS 180
           SL +ASST+SIKDIAKPENAFSRKRRNLLASNLIAGGISKRPI SSR SSLALAV MS S
Sbjct: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180

Query: 181 E----SDLNSRLPPPIRPPLHPNGRASRSNLGSAVPLLCKYPTWRSYSLADIQ 229
           E     DLNSRL P IRPPLHP GRASRSN GSAVPLLCK+PTWRSYSLA+IQ
Sbjct: 181 ERQSGEDLNSRLSPTIRPPLHPKGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 233

BLAST of Lag0004109 vs. ExPASy TrEMBL
Match: A0A5A7VFP0 (Damaged dna-binding 2, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00100 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.6e-97
Identity = 201/235 (85.53%), Postives = 212/235 (90.21%), Query Frame = 0

Query: 1   MSIALESNNRIPPSVFSQGGLPSYCSVLNTTGIIPVVRRETAVGDVVAPAEEVDRCSSSS 60
           MSIALESN RIPPSVFSQ GLP YCSVLNTTGIIPVVRRE AV D VAP E+VDRCSSSS
Sbjct: 1   MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAP-EDVDRCSSSS 60

Query: 61  SSSIGENSGLSVRSLDNDDEEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENSG SVRS DNDD EDNEAESSY+GPLGMESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLAEASSTASIKDIAKPENAFSRKRRNLLASNLIAGGISKRP-ISSSRSSLALAVAMSGS 180
           SLA+ASS++SIK+IAKPENAFSRKRRNLLASNLIAGGISKRP ISSSRSSLALAV +S S
Sbjct: 121 SLADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSS 180

Query: 181 ES----DLNSRLPP--PIRPPLHPNGRASRSNLGSAVPLLCKYPTWRSYSLADIQ 229
           ES    DLNS +PP  PIRPPLHPNGRASR N GSAVP LCK+PTWRSYS+A+IQ
Sbjct: 181 ESHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 234

BLAST of Lag0004109 vs. ExPASy TrEMBL
Match: A0A1S3BCZ8 (uncharacterized protein LOC103488525 OS=Cucumis melo OX=3656 GN=LOC103488525 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.6e-97
Identity = 201/235 (85.53%), Postives = 212/235 (90.21%), Query Frame = 0

Query: 1   MSIALESNNRIPPSVFSQGGLPSYCSVLNTTGIIPVVRRETAVGDVVAPAEEVDRCSSSS 60
           MSIALESN RIPPSVFSQ GLP YCSVLNTTGIIPVVRRE AV D VAP E+VDRCSSSS
Sbjct: 36  MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAP-EDVDRCSSSS 95

Query: 61  SSSIGENSGLSVRSLDNDDEEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENSG SVRS DNDD EDNEAESSY+GPLGMESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 96  SSSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFT 155

Query: 121 SLAEASSTASIKDIAKPENAFSRKRRNLLASNLIAGGISKRP-ISSSRSSLALAVAMSGS 180
           SLA+ASS++SIK+IAKPENAFSRKRRNLLASNLIAGGISKRP ISSSRSSLALAV +S S
Sbjct: 156 SLADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSS 215

Query: 181 ES----DLNSRLPP--PIRPPLHPNGRASRSNLGSAVPLLCKYPTWRSYSLADIQ 229
           ES    DLNS +PP  PIRPPLHPNGRASR N GSAVP LCK+PTWRSYS+A+IQ
Sbjct: 216 ESHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 269

BLAST of Lag0004109 vs. ExPASy TrEMBL
Match: A0A6J1K8D9 (uncharacterized protein LOC111492074 OS=Cucurbita maxima OX=3661 GN=LOC111492074 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.0e-96
Identity = 200/233 (85.84%), Postives = 209/233 (89.70%), Query Frame = 0

Query: 1   MSIALESNNRIPPSVFSQGGLPSYCSVLNTTGIIPVVRRETAVGDVVAPAEEVDRCSSSS 60
           MSIALESN+RIPPSVFSQG LPSYCSVLNTTG+IPVVRRE  VGDVVAPAE VDRCSSSS
Sbjct: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEVVDRCSSSS 60

Query: 61  SSSIGENSGLSVRSLDNDDEEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENS  SVRS+++DD EDNEAESSYK  LGMESLEEVL IRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLSIRRGISNFYNGKSKSFT 120

Query: 121 SLAEASSTASIKDIAKPENAFSRKRRNLLASNLIAGGISKRPISSSR-SSLALAVAMSGS 180
           SL +ASST+SIKDIAKPENAFSRKRRNLLASNLIAGGISKRPI SSR SSLALAV MS S
Sbjct: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180

Query: 181 ESD----LNSRLPPPIRPPLHPNGRASRSNLGSAVPLLCKYPTWRSYSLADIQ 229
           E      LNSRL P IRPPLHPNGRASRSN GSAVPLLCK+PTWRSYSLA+IQ
Sbjct: 181 ERKSGDVLNSRLSPTIRPPLHPNGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 233

BLAST of Lag0004109 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 122.5 bits (306), Expect = 4.5e-28
Identity = 98/221 (44.34%), Postives = 133/221 (60.18%), Query Frame = 0

Query: 48  APAEEVDRCSSSSSSSIGENSGLSVRSLDN--DDEEDNEAESSYKGPLG-MESLEEVLPI 107
           +P++     SSS+SSSIG NS    +S ++  DD  +NE ES YKGPL  MESLE+VLP+
Sbjct: 28  SPSDSSSSPSSSASSSIGRNSDDGEKSSEDGGDDAGENEVESPYKGPLEMMESLEQVLPV 87

Query: 108 RRGISNFYNGKSKSFTSL-AEA----SSTASIKDIAKPENAFSRKRRNLLASNL------ 167
           R+GIS +Y+GKSKSFT+L AEA    +S++S+KD+AKPEN +SR+RRNLL   +      
Sbjct: 88  RKGISKYYSGKSKSFTNLTAEAASALTSSSSMKDLAKPENPYSRRRRNLLCHQIWENNKT 147

Query: 168 -IAGGISKRPI-SSSRSSLALAVAM-----------SGSESDLNSRL----PPPIR---- 227
              GGISK+ + SSSRS+L LA+A+           SG +S   S       PP +    
Sbjct: 148 TPRGGISKKHVMSSSRSALTLAMAVAAGVMTGEGSSSGGDSSPGSSPTTSGSPPRQLHHH 207

BLAST of Lag0004109 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 107.5 bits (267), Expect = 1.5e-23
Identity = 72/131 (54.96%), Postives = 88/131 (67.18%), Query Frame = 0

Query: 57  SSSSSSSIGENSGLSVRSLDNDDEEDNEAESSYKGPLG-MESLEEVLPIRRGISNFYNGK 116
           SS+SS SIGENS       D+D+  +NE ESSY GPL  MESLEE LPI+R IS FY GK
Sbjct: 23  SSTSSDSIGENS-------DDDEGGENEIESSYNGPLDMMESLEEALPIKRAISKFYKGK 82

Query: 117 SKSFTSLAEASSTASIKDIAKPENAFSRKRRNLLASNLIA-GGISKRPISSSRSSLALAV 176
           SKSF SL+E SS   +KD+ KPEN +SR+RRNLL+  + + GGISK+P  S        +
Sbjct: 83  SKSFMSLSETSS-LPVKDLTKPENLYSRRRRNLLSHRICSRGGISKKPFKS-------VL 138

Query: 177 AMSGSESDLNS 186
           AMS  E D +S
Sbjct: 143 AMSQREGDSSS 138

BLAST of Lag0004109 vs. TAIR 10
Match: AT2G24550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). )

HSP 1 Score: 69.7 bits (169), Expect = 3.4e-12
Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 0

Query: 57  SSSSSSSIGENSGLSVRSLDNDDEEDNEAESSYKGPLG--MESLEEVLPIRRGISNFYNG 116
           SS SSSSIGE+S       + ++EE+++A S  +G L     SLE+ LPI+RG+SN Y G
Sbjct: 64  SSDSSSSIGESSE------NEEEEEEDDAVSCQRGTLDSFSSSLEDSLPIKRGLSNHYVG 123

Query: 117 KSKSFTSLAEASSTASIKDIAKPENAFSRKRRNLLASNLIAGGIS 160
           KSKSF +L EA+S A  KD+ K EN F+++RR ++A+ L   G S
Sbjct: 124 KSKSFGNLMEAASKA--KDLEKVENPFNKRRRLVIANKLRRRGRS 160

BLAST of Lag0004109 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 0

Query: 55  RCSSS----SSSSIGENSGLSVRSLDNDDEEDNEAESSYKGPLG--MESLEEVLPIRRGI 114
           RC  S    SSSS+GE S       +N+++ED+   SS    L     SLE+ LPI+RG+
Sbjct: 34  RCGRSPPPESSSSVGETS-------ENEEDEDDAVSSSQGRWLNSFSSSLEDSLPIKRGL 93

Query: 115 SNFYNGKSKSFTSLAEASSTASIKDIAKPENAFSRKRRNLLASNL 154
           SN Y GKSKSF +L EAS+T    D+ K E+  +++RR L+A+ L
Sbjct: 94  SNHYIGKSKSFGNLMEASNT---NDLVKVESPLNKRRRLLIANKL 128

BLAST of Lag0004109 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-09
Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 0

Query: 58  SSSSSSIGE--NSGLSVRSLDNDDEEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGK 117
           SS SSSIG   +S       +N++++ +  E   +G   M SLE+ LP +RG+SN Y GK
Sbjct: 59  SSDSSSIGTPGDSEEDEEESENENDDVSSKELGLRGLASMSSLEDSLPSKRGLSNHYKGK 118

Query: 118 SKSFTSLAEASSTASIKDIAKPENAFSRKRRNLLASNL 154
           SKSF +L E     S+K++AK EN  +++RR  + + L
Sbjct: 119 SKSFGNLGE---IGSVKEVAKQENPLNKRRRLQICNKL 153

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022131782.15.7e-10288.84uncharacterized protein LOC111004861 [Momordica charantia][more]
XP_022962518.14.2e-9786.27uncharacterized protein LOC111462922 [Cucurbita moschata] >KAG6598596.1 hypothet... [more]
XP_023547301.19.4e-9785.84uncharacterized protein LOC111806162 [Cucurbita pepo subsp. pepo][more]
KAA0064705.19.4e-9785.53Damaged dna-binding 2, putative isoform 1 [Cucumis melo var. makuwa] >TYK00723.1... [more]
XP_008445543.19.4e-9785.53PREDICTED: uncharacterized protein LOC103488525 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1BS002.8e-10288.84uncharacterized protein LOC111004861 OS=Momordica charantia OX=3673 GN=LOC111004... [more]
A0A6J1HF102.1e-9786.27uncharacterized protein LOC111462922 OS=Cucurbita moschata OX=3662 GN=LOC1114629... [more]
A0A5A7VFP04.6e-9785.53Damaged dna-binding 2, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A1S3BCZ84.6e-9785.53uncharacterized protein LOC103488525 OS=Cucumis melo OX=3656 GN=LOC103488525 PE=... [more]
A0A6J1K8D93.0e-9685.84uncharacterized protein LOC111492074 OS=Cucurbita maxima OX=3661 GN=LOC111492074... [more]
Match NameE-valueIdentityDescription
AT5G21940.14.5e-2844.34unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G43850.11.5e-2354.96unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G24550.13.4e-1247.62unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G31510.11.6e-0943.81unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G24890.13.5e-0939.80unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..92
NoneNo IPR availablePANTHERPTHR33172OS08G0516900 PROTEINcoord: 50..228
NoneNo IPR availablePANTHERPTHR33172:SF37MYOSIN LIGHT CHAIN KINASE DDB_G0279831 ISOFORM X1-RELATEDcoord: 50..228

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0004109.1Lag0004109.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding