Lag0004109 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAATTGCTTTGGAGAGCAACAACAGGATTCCGCCGTCGGTTTTCTCTCAAGGCGGCTTGCCGTCGTATTGTTCCGTCTTGAATACCACGGGAATTATTCCGGTAGTCCGACGAGAGACTGCCGTTGGTGATGTGGTGGCGCCGGCCGAGGAGGTGGATAGATGCAGTTCGTCTTCGTCGTCGTCGATTGGGGAAAACAGCGGTTTATCTGTTAGATCGTTGGATAATGACGACGAGGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAATCGTTGGAGGAAGTTTTGCCTATCAGGTTAGCGATTGTAATTTGTTTTTTGTTCTTCGTAATCTTCTTTTTCTTCCTCTTCTTCTCCTGGTTTCTAGATTTAGGGAAACTCGATCGATCGCCTTTCGATTTCGTTTTTTGGAACTTTTAACAACGAGATTCCGCTGAATTTAACAATTGAGATCATCTTGTGTATTTGCAGGAGAGGAATTTCAAATTTCTACAACGGAAAATCGAAATCCTTCACGAGCCTGGCAGAGGCTTCCTCAACGGCCTCCATTAAAGACATAGCAAAGCCTGAGAATGCCTTCTCTCGGAAACGGAGAAATCTTCTTGCATCCAATCTCATCGCCGGCGGCATATCGAAGCGACCGATTAGTTCAAGCCGAAGCTCGTTGGCGCTGGCCGTCGCCATGAGTGGTTCTGAAAGCGATCTGAATTCGAGATTGCCTCCGCCGATTCGACCTCCATTGCACCCCAACGGACGCGCATCTCGCTCCAATTTAGGTTCTGCAGTTCCTCTTCTCTGTAAATACCCCACTTGGCGATCATATTCCTTGGCCGATATTCAGTAG ATGTCAATTGCTTTGGAGAGCAACAACAGGATTCCGCCGTCGGTTTTCTCTCAAGGCGGCTTGCCGTCGTATTGTTCCGTCTTGAATACCACGGGAATTATTCCGGTAGTCCGACGAGAGACTGCCGTTGGTGATGTGGTGGCGCCGGCCGAGGAGGTGGATAGATGCAGTTCGTCTTCGTCGTCGTCGATTGGGGAAAACAGCGGTTTATCTGTTAGATCGTTGGATAATGACGACGAGGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAATCGTTGGAGGAAGTTTTGCCTATCAGGAGAGGAATTTCAAATTTCTACAACGGAAAATCGAAATCCTTCACGAGCCTGGCAGAGGCTTCCTCAACGGCCTCCATTAAAGACATAGCAAAGCCTGAGAATGCCTTCTCTCGGAAACGGAGAAATCTTCTTGCATCCAATCTCATCGCCGGCGGCATATCGAAGCGACCGATTAGTTCAAGCCGAAGCTCGTTGGCGCTGGCCGTCGCCATGAGTGGTTCTGAAAGCGATCTGAATTCGAGATTGCCTCCGCCGATTCGACCTCCATTGCACCCCAACGGACGCGCATCTCGCTCCAATTTAGGTTCTGCAGTTCCTCTTCTCTGTAAATACCCCACTTGGCGATCATATTCCTTGGCCGATATTCAGTAG ATGTCAATTGCTTTGGAGAGCAACAACAGGATTCCGCCGTCGGTTTTCTCTCAAGGCGGCTTGCCGTCGTATTGTTCCGTCTTGAATACCACGGGAATTATTCCGGTAGTCCGACGAGAGACTGCCGTTGGTGATGTGGTGGCGCCGGCCGAGGAGGTGGATAGATGCAGTTCGTCTTCGTCGTCGTCGATTGGGGAAAACAGCGGTTTATCTGTTAGATCGTTGGATAATGACGACGAGGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAATCGTTGGAGGAAGTTTTGCCTATCAGGAGAGGAATTTCAAATTTCTACAACGGAAAATCGAAATCCTTCACGAGCCTGGCAGAGGCTTCCTCAACGGCCTCCATTAAAGACATAGCAAAGCCTGAGAATGCCTTCTCTCGGAAACGGAGAAATCTTCTTGCATCCAATCTCATCGCCGGCGGCATATCGAAGCGACCGATTAGTTCAAGCCGAAGCTCGTTGGCGCTGGCCGTCGCCATGAGTGGTTCTGAAAGCGATCTGAATTCGAGATTGCCTCCGCCGATTCGACCTCCATTGCACCCCAACGGACGCGCATCTCGCTCCAATTTAGGTTCTGCAGTTCCTCTTCTCTGTAAATACCCCACTTGGCGATCATATTCCTTGGCCGATATTCAGTAG MSIALESNNRIPPSVFSQGGLPSYCSVLNTTGIIPVVRRETAVGDVVAPAEEVDRCSSSSSSSIGENSGLSVRSLDNDDEEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLAEASSTASIKDIAKPENAFSRKRRNLLASNLIAGGISKRPISSSRSSLALAVAMSGSESDLNSRLPPPIRPPLHPNGRASRSNLGSAVPLLCKYPTWRSYSLADIQ Homology
BLAST of Lag0004109 vs. NCBI nr
Match: XP_022131782.1 (uncharacterized protein LOC111004861 [Momordica charantia]) HSP 1 Score: 381.3 bits (978), Expect = 5.7e-102 Identity = 207/233 (88.84%), Postives = 217/233 (93.13%), Query Frame = 0
BLAST of Lag0004109 vs. NCBI nr
Match: XP_022962518.1 (uncharacterized protein LOC111462922 [Cucurbita moschata] >KAG6598596.1 hypothetical protein SDJN03_08374, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029529.1 hypothetical protein SDJN02_07868 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 365.2 bits (936), Expect = 4.2e-97 Identity = 201/233 (86.27%), Postives = 210/233 (90.13%), Query Frame = 0
BLAST of Lag0004109 vs. NCBI nr
Match: XP_023547301.1 (uncharacterized protein LOC111806162 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 364.0 bits (933), Expect = 9.4e-97 Identity = 200/233 (85.84%), Postives = 210/233 (90.13%), Query Frame = 0
BLAST of Lag0004109 vs. NCBI nr
Match: KAA0064705.1 (Damaged dna-binding 2, putative isoform 1 [Cucumis melo var. makuwa] >TYK00723.1 Damaged dna-binding 2, putative isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 364.0 bits (933), Expect = 9.4e-97 Identity = 201/235 (85.53%), Postives = 212/235 (90.21%), Query Frame = 0
BLAST of Lag0004109 vs. NCBI nr
Match: XP_008445543.1 (PREDICTED: uncharacterized protein LOC103488525 [Cucumis melo]) HSP 1 Score: 364.0 bits (933), Expect = 9.4e-97 Identity = 201/235 (85.53%), Postives = 212/235 (90.21%), Query Frame = 0
BLAST of Lag0004109 vs. ExPASy TrEMBL
Match: A0A6J1BS00 (uncharacterized protein LOC111004861 OS=Momordica charantia OX=3673 GN=LOC111004861 PE=4 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 2.8e-102 Identity = 207/233 (88.84%), Postives = 217/233 (93.13%), Query Frame = 0
BLAST of Lag0004109 vs. ExPASy TrEMBL
Match: A0A6J1HF10 (uncharacterized protein LOC111462922 OS=Cucurbita moschata OX=3662 GN=LOC111462922 PE=4 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 2.1e-97 Identity = 201/233 (86.27%), Postives = 210/233 (90.13%), Query Frame = 0
BLAST of Lag0004109 vs. ExPASy TrEMBL
Match: A0A5A7VFP0 (Damaged dna-binding 2, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00100 PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 4.6e-97 Identity = 201/235 (85.53%), Postives = 212/235 (90.21%), Query Frame = 0
BLAST of Lag0004109 vs. ExPASy TrEMBL
Match: A0A1S3BCZ8 (uncharacterized protein LOC103488525 OS=Cucumis melo OX=3656 GN=LOC103488525 PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 4.6e-97 Identity = 201/235 (85.53%), Postives = 212/235 (90.21%), Query Frame = 0
BLAST of Lag0004109 vs. ExPASy TrEMBL
Match: A0A6J1K8D9 (uncharacterized protein LOC111492074 OS=Cucurbita maxima OX=3661 GN=LOC111492074 PE=4 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 3.0e-96 Identity = 200/233 (85.84%), Postives = 209/233 (89.70%), Query Frame = 0
BLAST of Lag0004109 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 122.5 bits (306), Expect = 4.5e-28 Identity = 98/221 (44.34%), Postives = 133/221 (60.18%), Query Frame = 0
BLAST of Lag0004109 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 107.5 bits (267), Expect = 1.5e-23 Identity = 72/131 (54.96%), Postives = 88/131 (67.18%), Query Frame = 0
BLAST of Lag0004109 vs. TAIR 10
Match: AT2G24550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 69.7 bits (169), Expect = 3.4e-12 Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 0
BLAST of Lag0004109 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09 Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 0
BLAST of Lag0004109 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 59.7 bits (143), Expect = 3.5e-09 Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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