Lag0004058 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0004058
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr6: 773973 .. 775074 (+)
RNA-Seq ExpressionLag0004058
SyntenyLag0004058
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGGAACTAACGAAAGACCTGTTTATGGAGGGTGGTAAAAATGAATTGCTTCTCAGGTTGTGCAATGTGGAAAATTTTCAATACATAGGGAATAAATGCAGATGTTACATTGGATGTGCCGAGAAGACCCTGTCAATGTTGGATAGTGTGGAAGCTTTCATTCAAACCAAAAGTAATTATTGTGGTTTTGCTCCTTTTGGGTGGTGGTGTTTTTTAAACTTTTTTCTTTGGATTGTGCTTTCTGGTCCATGTGGACTGTTTTATATTCCTTCATTTTTTTCTCAATGAAAGTTTGTTTTTTCCATTAAAAAGAAAAAAGACCAATAGTAACTATTGTGGTGTTGTTTGTGCAGAGATTGAACTTCCGAGTTCTTTGGTCGGTTCTGATACAAAGATTGTGGTATACTTGGTGACTTTTGCAAACACCAAACTTCTAACTGGACAGATGGTTGGATCTCACATGCCAAATACATTGTGTCCAATGTGGTTACCACATGGCCCCCAGATATAATGCTGTCTTCCGATTTCTCATACTACATGAGTACGTATACCTGCTACCACAGTGAACACCAAACAAGTATTTGACTTATCCTGGTTTCAGTGGTGTGGTTCAGTCTCACATTGTTTCATAAGCAATATAAAAGGAACTGAGCGGAGCTGTGGTTGAAGTAGAGAAGAGAACAAAATTATAGTAGTAAACGAAGGGACTGATGAAAAGAGAGATTTTAACATTCAAGCGCTTGACATTAAAAATATGCATGGGATTCATTTAGTTTTCATTGGATTACTGTAAACATTAACAGGGAGCGTCCTGGGACTGATTCTATAAATAAAATGGCATTGCCATTCATTCCTAAGCTATAAGTTGCAAGCATCATTTATACTTTGAACATTTGGCATGAAAAATTTAAAAAATAAAATGTCCCCCCACCCCTCTTCCGGGAGAAAGCATTAATGAAACTTAAGAACTGTCTAGCTGGCTTAATATTATTCATGTGGACAGACTTGTTTCAGGCTGATGATAGGTAAAGAGCTAATGAGAGAGCAAGGGCATGCTGAAATGGAGAAATCAAGGATGGGGAAGGTCAGAAGGAAGTGA

mRNA sequence

ATGCTGGAACTAACGAAAGACCTGTTTATGGAGGGTGGTAAAAATGAATTGCTTCTCAGGTTGTGCAATGTGGAAAATTTTCAATACATAGGGAATAAATGCAGATGTTACATTGGATGTGCCGAGAAGACCCTGTCAATGTTGGATAGTGTGGAAGCTTTCATTCAAACCAAAAAGATTGAACTTCCGAGTTCTTTGGTCGGTTCTGATACAAAGATTGTGGTATACTTGGTGACTTTTGCAAACACCAAACTTCTAACTGGACAGATGACTTGTTTCAGGCTGATGATAGGTAAAGAGCTAATGAGAGAGCAAGGGCATGCTGAAATGGAGAAATCAAGGATGGGGAAGGTCAGAAGGAAGTGA

Coding sequence (CDS)

ATGCTGGAACTAACGAAAGACCTGTTTATGGAGGGTGGTAAAAATGAATTGCTTCTCAGGTTGTGCAATGTGGAAAATTTTCAATACATAGGGAATAAATGCAGATGTTACATTGGATGTGCCGAGAAGACCCTGTCAATGTTGGATAGTGTGGAAGCTTTCATTCAAACCAAAAAGATTGAACTTCCGAGTTCTTTGGTCGGTTCTGATACAAAGATTGTGGTATACTTGGTGACTTTTGCAAACACCAAACTTCTAACTGGACAGATGACTTGTTTCAGGCTGATGATAGGTAAAGAGCTAATGAGAGAGCAAGGGCATGCTGAAATGGAGAAATCAAGGATGGGGAAGGTCAGAAGGAAGTGA

Protein sequence

MLELTKDLFMEGGKNELLLRLCNVENFQYIGNKCRCYIGCAEKTLSMLDSVEAFIQTKKIELPSSLVGSDTKIVVYLVTFANTKLLTGQMTCFRLMIGKELMREQGHAEMEKSRMGKVRRK
Homology
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BLAST of Lag0004058 vs. NCBI nr
Match: KAG6585788.1 (hypothetical protein SDJN03_18521, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-09
Identity = 51/103 (49.51%), Postives = 62/103 (60.19%), Query Frame = 0 

Query: 41  AEKTLSMLDSVEAFIQTKKIELPSSLVGSDTKIVVYLVTFAN-----------------T 100
           AEKTLSMLD +E F+QTKKIEL SS+   D KIVV LV  A                  +
Sbjct: 64  AEKTLSMLDRMETFVQTKKIELLSSMGSYDKKIVVNLVISATPTSNWTGGCLAHSKRILS 123

Query: 101 KLLT---GQMTCFRL----MIGKELMREQGHAEMEKSRMGKVR 120
           K+LT     + C  +    +IGKELMRE+GHAEME SRMGK++
Sbjct: 124 KVLTTWPPDICCLLISHTTLIGKELMREKGHAEMENSRMGKLQ 166

The following BLAST results are available for this feature:
BLAST of Lag0004058 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6585788.11.8e-0949.51hypothetical protein SDJN03_18521, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Lag0004058 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0004058.1Lag0004058.1mRNA