Lag0004009 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0004009
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	single-stranded DNA-binding protein WHY1, chloroplastic-like
Location	chr6: 360355 .. 363800 (-)
RNA-Seq Expression	Lag0004009
Synteny	Lag0004009

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCGTCTTCAATGGCTTTCTTCTTCCTTGCTTCCGCCATTAAACCCTGAGCTCTCACTGGAACCCTGTTTGAACCGCAGACTATGTACCCTCAACTCCTCTCGTCCACTCCTCACTCTCACCACTACACGAAAATCATCTCCAAAATGCCAATACTCATGGAACACGCAGCAGCAGCAACCACCCTTCGAACCAGGCTCTCAGGCCGATTCATTTTCGCCACAAACTCGCGCCGGAGGTACTCCGTTATCTCTTTCTTTCATTTTCTTTTTGGGGGAAAAACTTCGTGTTTCCTGTCGGTCTTAGTGGGTGAGAGGAGGAAATGGATGCTATTTGAAAATGGAAGGAAAATGAAGCAAGCGTATAGCTCTGTCTGTGACATTGAAGACATGCACCGACTTTGCCTAACCGTGCATGGACTGAATTATTACGACCTTGTTCGCTGTTTATTTCTCTTCTGTTCCTAAATTTTTCCAGAGACCAGAAGCTGGGATTATCTGGGAATGATTAAATTTCTGAGGGTTTCTCCTAATCCAAGGGACTTTTTGAAGTTTTTTGTTTATTTATTGGGTTCTGAAGTATTATGTTTTGGCTTGTTTGTAGTTGCTGCAGCATTGCCACCAAGGTTTTTTGTCGGTCATTCGATATACAAAGGGAAGGCTGCCCTTACAGTTGAGCCTAGACCACCAGAGTTTACACCTCTAGATGTATGTTTGACTTGAATTCTCTGTTCATCACAAGAATATGTACTTGAGCTTTGTCAAACTTCATGATAGGCTGTTTTTATTTGTTAGTATTGCAAGGTTATTAATCTTTTAAAAATTGTCAGTCAGGAGCGTTCAAAATATCCAAGGAAGGATTTGTATTGCTTCAGTTTGCCCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTGTTCATTAAAACGAGCTGATATTTAACTCCTAAATTTATGGAAGTTTCTGAATTAATGAGCTAAACTGAAATTCTAGGTTATTGCTGATTACTTTTCCACAGGTTCCATATTTGGCGTCTTAGATGTGTGGAAAAGTAGTATCATTTCCATGATGGAGAAGATGATATTAAAAATACTAAGGCATGTTTGGGGAGCTGACAAACATTTTCTGTTTTCTAAAATCAAACTATTTTTAAGAACTATAGTTAGATGATGTCTTATAAAGGTTAAGATCACCGTGCATTTGAATTCACTATCTTCGAACTTGTGTGTGTGTGTGTGTGTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTAAATGAGAACAACTGGAAATGCTACTATGAGAATAAACTAAATCAGATAAAGTGGAGAACTTTTTGCGGAAATATTTCCCTAGTTTTTATAATTTTTTATGATTATTTGATAAGTTACCGAATTAGATTATACTTTGTTTTGTATATAGGTATTCTCATTATCAGTGACAGAATTGGGAAGTCTAGTTGCCCTTGGCCCGCGGGAGTCTTGTGAATTTTTTCACGATCCCTATAAGGGAAAAAGGTACTATCTTTTTACCATTAGTTTCTTTTGTCGTGCCATGTTCATGTTTATGTATTTTTGGATTCTTTTGTTACCACTAACATTTATACCATTGTCTGCCCAAGCATGCTTTACTAAATCCCAGAATGGTATGATTGAATCACATTGAACATTGAAAGCAATGATGTCTAGATGATTCCTTTAGTAGTCAAATACTTCCTCTTTCTTGCGTGTACATGCTGACCATCTCTCTTTAGTAGCCAAATAAAATTATTTTTACAAGGTTTGAGAACATAGCATTTTATGATAGCAAGAGCACACAATATATGTTCTGCAGTGATGAAGGGAAGGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCGGATGGGTCGGGCCATTTCTTCAATCTCAGTAAGTCTTGTATTGAAACCTTTATGATCCATTTGAGATCGAATGCAATGCTAAATTCTGCTTCATGGAATCATGGGTGTTCAGTTGAAGAGAGGGAATGTGTTACCTCCAATTGAATTTAATTGGTTGGAAACATCTATCTCTCATTTACTTATGTCATATTATTTTTCCGTACCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTAATTTTAATTTTAGTTCTTTCTTTCATATCTTCAATTATGATATTGGTTCTGATAGGATTAGTACCCTTCCTATCAAATACACGTACTCATAAAGAAGTAAAGAAGTGAAAGAATTAGTATATGATAAGTTTGTTGCGCAACTTGTCAGGGGCACATCTTTAGTATAGATGGAGCTGTGTGTGCTGGGTCGTCAGGAGTACAACATTGATTTGCTTACTTCTAGTTCAATGGATAACTAGATTTTAATTGTCCTGCTTCAATTTGCTTCTTTATTAGACCTCTCGAATAGTCTTTAGAACCTGTTTTACCCTTTGGTTTGCTTATTCTAAAGTTTAATAAATAATCTACATATTGACGGTCATAACAATTGCCATCTGAATCAAATAGTTAATGGGTTGTCTATTTCTAATGAAATTTGATTTTTTTTTTTCTTAAAAAATTCTTTTTCCAGATAGCACCGATCCTGTAAACTGCAGTGATGTTAGAGAAAGTCTGTTTTTTTTTTCTCTCTCTCTCTCTCTTACCTTTTCTATTCTATTTTGTTGCACAAGGCGTTCAGAACAAGCTAATCAACATGGATGAGAGCATTTATATTCCCATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTCAAGGTAAAGTTCTTTCCTGTTTACATACTGAACTTTCTTGTCGTGCTTGTTTGGTTGAATGAAGACCTGCGATTGAGATCAAAGGAGTGAAAAACTGCGTGTATGATTTGGTCCCTTATCAGGAATGCAAATCGAACCTGCAAAAATTAAGAAAAATAACTACTAAACTGACCAAAACCAAATTGGTCCAGTTGGTTTCAAGAACTCATATTTGCTGGTTGGGGTTCGGATTCATAAAGTTCAAAACTGAAGATTAGTCGGTTGATTTGGGTTGAGTCACTTTTGGTTTGTTTGATCCAGTTTTAGTTGTGGTTCAGTCGGCTTTGTTTAGGCAGTCTGTTTGATTTTCCAAAAATTTGTTTCAACCTCAGTTTTCTATAGTCTTTTAGTTGGTAGGCTTGTTTTGGCGAGCTGAACTGATGTAGTTACACTCTTATTTGTGACGACTCCTTTTTCTCCAAATCATGTGATTATAATTCATGAATTGGATGTTTGAGGTTGGGATTCTAATGCGGGTGAATTGATTACTCTGCAGTTTATCTTGCCGCACCTCATGGGTTGGCATACGATTGCAAACACCATCATGAGGCCTGAAGAAAGCAGCCGAGTAAATAACGCCAATCCCAGATACGGGGGTGACTTTGAATGGAGCAGATAG

mRNA sequence

ATGCTGCGTCTTCAATGGCTTTCTTCTTCCTTGCTTCCGCCATTAAACCCTGAGCTCTCACTGGAACCCTGTTTGAACCGCAGACTATGTACCCTCAACTCCTCTCGTCCACTCCTCACTCTCACCACTACACGAAAATCATCTCCAAAATGCCAATACTCATGGAACACGCAGCAGCAGCAACCACCCTTCGAACCAGGCTCTCAGGCCGATTCATTTTCGCCACAAACTCGCGCCGGAGTTGCTGCAGCATTGCCACCAAGGTTTTTTGTCGGTCATTCGATATACAAAGGGAAGGCTGCCCTTACAGTTGAGCCTAGACCACCAGAGTTTACACCTCTAGATTCAGGAGCGTTCAAAATATCCAAGGAAGGATTTGTATTGCTTCAGTTTGCCCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTATTCTCATTATCAGTGACAGAATTGGGAAGTCTAGTTGCCCTTGGCCCGCGGGAGTCTTGTGAATTTTTTCACGATCCCTATAAGGGAAAAAGTGATGAAGGGAAGGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCGGATGGGTCGGGCCATTTCTTCAATCTCAGCGTTCAGAACAAGCTAATCAACATGGATGAGAGCATTTATATTCCCATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTCAAGTTTATCTTGCCGCACCTCATGGGTTGGCATACGATTGCAAACACCATCATGAGGCCTGAAGAAAGCAGCCGAGTAAATAACGCCAATCCCAGATACGGGGGTGACTTTGAATGGAGCAGATAG

Coding sequence (CDS)

ATGCTGCGTCTTCAATGGCTTTCTTCTTCCTTGCTTCCGCCATTAAACCCTGAGCTCTCACTGGAACCCTGTTTGAACCGCAGACTATGTACCCTCAACTCCTCTCGTCCACTCCTCACTCTCACCACTACACGAAAATCATCTCCAAAATGCCAATACTCATGGAACACGCAGCAGCAGCAACCACCCTTCGAACCAGGCTCTCAGGCCGATTCATTTTCGCCACAAACTCGCGCCGGAGTTGCTGCAGCATTGCCACCAAGGTTTTTTGTCGGTCATTCGATATACAAAGGGAAGGCTGCCCTTACAGTTGAGCCTAGACCACCAGAGTTTACACCTCTAGATTCAGGAGCGTTCAAAATATCCAAGGAAGGATTTGTATTGCTTCAGTTTGCCCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTATTCTCATTATCAGTGACAGAATTGGGAAGTCTAGTTGCCCTTGGCCCGCGGGAGTCTTGTGAATTTTTTCACGATCCCTATAAGGGAAAAAGTGATGAAGGGAAGGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCGGATGGGTCGGGCCATTTCTTCAATCTCAGCGTTCAGAACAAGCTAATCAACATGGATGAGAGCATTTATATTCCCATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTCAAGTTTATCTTGCCGCACCTCATGGGTTGGCATACGATTGCAAACACCATCATGAGGCCTGAAGAAAGCAGCCGAGTAAATAACGCCAATCCCAGATACGGGGGTGACTTTGAATGGAGCAGATAG

Protein sequence

MLRLQWLSSSLLPPLNPELSLEPCLNRRLCTLNSSRPLLTLTTTRKSSPKCQYSWNTQQQQPPFEPGSQADSFSPQTRAGVAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTIMRPEESSRVNNANPRYGGDFEWSR

Homology

[Close]

BLAST of Lag0004009 vs. NCBI nr
Match: XP_022151332.1 (single-stranded DNA-binding protein WHY1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 496.1 bits (1276), Expect = 1.9e-136
Identity = 248/277 (89.53%), Postives = 257/277 (92.78%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPP-LNPELSLEP---CLNRRLCTLNSSRPLLTLTTTRKSSPKCQYSWN 60
           MLRLQWLSSSLLPP LNPELS E    C NRRLCTLNSSRPLLTLT TRK SPKCQYSW+
Sbjct: 1   MLRLQWLSSSLLPPLLNPELSPETSHLCPNRRLCTLNSSRPLLTLTATRKPSPKCQYSWS 60

Query: 61  TQQQQ-PPFEPGSQADSFSPQTRAGVAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLD 120
           TQQQQ PP EPGSQA SFSPQTRAG A ALPPRFFVGHSIYKGKA LTVEPRPPEFTPLD
Sbjct: 61  TQQQQPPPSEPGSQAHSFSPQTRAGAAGALPPRFFVGHSIYKGKAVLTVEPRPPEFTPLD 120

Query: 121 SGAFKISKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYK 180
           SGAFK+S+EGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALG R+SCEFFHDPYK
Sbjct: 121 SGAFKLSREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGLRDSCEFFHDPYK 180

Query: 181 GKSDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFIL 240
           GKS+EGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFIL
Sbjct: 181 GKSEEGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFIL 240

Query: 241 PHLMGWHTIANTIMRPEESSRVNNANPRYGGDFEWSR 273
           PHLMGWH I+NT+ R E+S RVNNANPRYGGDFEWSR
Sbjct: 241 PHLMGWHMISNTMTRAEDSGRVNNANPRYGGDFEWSR 277

[Close]

BLAST of Lag0004009 vs. NCBI nr
Match: XP_008456468.1 (PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucumis melo] >KAA0036450.1 single-stranded DNA-binding protein WHY1 [Cucumis melo var. makuwa] >TYK00036.1 single-stranded DNA-binding protein WHY1 [Cucumis melo var. makuwa])

HSP 1 Score: 491.1 bits (1263), Expect = 6.1e-135
Identity = 241/273 (88.28%), Postives = 252/273 (92.31%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPPLNPELSLEPCLNRRLCTLNSSRPLLTLTTTRKSSPKCQYSWNT-QQ 60
           MLRLQWLSSSLLP  NPELS E   N RLC+LN  RPLLTLTTTRK SPKCQYSWNT Q 
Sbjct: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60

Query: 61  QQPPFEPGSQADSFSPQTRAGVAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120
           QQ  FEP SQ DSFSPQ+RAG AAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF
Sbjct: 61  QQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120

Query: 121 KISKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSD 180
           KIS+EG V+LQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALGPRE+CEFFHDPYKGKSD
Sbjct: 121 KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD 180

Query: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFILPHLM 240
           EGKVRKILKVEPLPDGSGHFFNLSVQNKLIN+DESIYIPITKAEYTVLVEAFKFILPHLM
Sbjct: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM 240

Query: 241 GWHTIANTIMRPEESSRVNNANPRYGGDFEWSR 273
           GWHTIANT+ +PE+SSR N ANPRYGGDFEW+R
Sbjct: 241 GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 273

[Close]

BLAST of Lag0004009 vs. NCBI nr
Match: XP_023002109.1 (single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 491.1 bits (1263), Expect = 6.1e-135
Identity = 241/276 (87.32%), Postives = 254/276 (92.03%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPPLNPELSLEPCLNRRLCTLNSSRPLLTLTTTRKSSPKCQY-SWNTQQ 60
           MLRLQWLSSSLLPPLNPEL  +PC N R C  NSSR L TLT TRK SPKCQY SWNT  
Sbjct: 1   MLRLQWLSSSLLPPLNPELCAQPCKNPRRCRFNSSRQLFTLTATRKPSPKCQYASWNT-- 60

Query: 61  QQPPFEPGSQADSFSPQTRAGVAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120
           QQP FEP SQ DS+SPQTRAG AAALPPRFFVGHSIYKGKAAL++EPRPPEFTP+DSGAF
Sbjct: 61  QQPAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAF 120

Query: 121 KISKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSD 180
           K+S++GFV+LQ APAAGVRQYDWSRKQVFSLS+TELGSLVALGPRESCEFFHDPYKGKSD
Sbjct: 121 KVSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSD 180

Query: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFILPHLM 240
           EGKVRKILKVEPLPDGSGHFFNLSVQNKLIN+DESIYIPITKAEYTVLVEAFKFILPHLM
Sbjct: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM 240

Query: 241 GWHTIANTIMRPEESSRVNNANPRYG---GDFEWSR 273
           GWHTIANT+MRPE+SSRVNNANPRYG   GDFEWSR
Sbjct: 241 GWHTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 274

[Close]

BLAST of Lag0004009 vs. NCBI nr
Match: XP_038884311.1 (single-stranded DNA-binding protein WHY1, chloroplastic-like isoform X2 [Benincasa hispida])

HSP 1 Score: 489.6 bits (1259), Expect = 1.8e-134
Identity = 245/274 (89.42%), Postives = 251/274 (91.61%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPPLNPELSLEPCLNRRLCTLNSSRPLLTLTTTRKSSPKCQYSWNT--Q 60
           MLRLQWLSSSLLP  NPEL  E   N RLC+LNS RPLLTL    K SPKCQYSWNT  Q
Sbjct: 1   MLRLQWLSSSLLPSFNPELLPESLSNGRLCSLNSFRPLLTL----KPSPKCQYSWNTQQQ 60

Query: 61  QQQPPFEPGSQADSFSPQTRAGVAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGA 120
           QQQ PFEPGSQ DSFS QTRA  AAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGA
Sbjct: 61  QQQSPFEPGSQTDSFSSQTRARAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGA 120

Query: 121 FKISKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKS 180
           FKIS+EGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKS
Sbjct: 121 FKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKS 180

Query: 181 DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFILPHL 240
           DEGKVRKILKVEPLPDGSGHFFNLSVQNKLIN+DESIYIPITKAEYTVLVEAFKF+LPHL
Sbjct: 181 DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFVLPHL 240

Query: 241 MGWHTIANTIMRPEESSRVNNANPRYGGDFEWSR 273
           MGWHTIANTI RPE+S RVNNANPRYGGDFEW+R
Sbjct: 241 MGWHTIANTITRPEDSIRVNNANPRYGGDFEWNR 270

[Close]

BLAST of Lag0004009 vs. NCBI nr
Match: XP_038884310.1 (single-stranded DNA-binding protein WHY1, chloroplastic-like isoform X1 [Benincasa hispida])

HSP 1 Score: 486.5 bits (1251), Expect = 1.5e-133
Identity = 246/275 (89.45%), Postives = 252/275 (91.64%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPPLNPELSLEPCLNRRLCTLNSSRPLLTLTTTRKSSPKCQYSWNT--Q 60
           MLRLQWLSSSLLP  NPEL  E   N RLC+LNS RPLLTL    K SPKCQYSWNT  Q
Sbjct: 1   MLRLQWLSSSLLPSFNPELLPESLSNGRLCSLNSFRPLLTL----KPSPKCQYSWNTQQQ 60

Query: 61  QQQPPFEPGSQADSFSPQTRAGV-AAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSG 120
           QQQ PFEPGSQ DSFS QTRA V AAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSG
Sbjct: 61  QQQSPFEPGSQTDSFSSQTRARVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSG 120

Query: 121 AFKISKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGK 180
           AFKIS+EGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGK
Sbjct: 121 AFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGK 180

Query: 181 SDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFILPH 240
           SDEGKVRKILKVEPLPDGSGHFFNLSVQNKLIN+DESIYIPITKAEYTVLVEAFKF+LPH
Sbjct: 181 SDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFVLPH 240

Query: 241 LMGWHTIANTIMRPEESSRVNNANPRYGGDFEWSR 273
           LMGWHTIANTI RPE+S RVNNANPRYGGDFEW+R
Sbjct: 241 LMGWHTIANTITRPEDSIRVNNANPRYGGDFEWNR 271

[Close]

BLAST of Lag0004009 vs. ExPASy Swiss-Prot
Match: Q9M9S3 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WHY1 PE=1 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 5.6e-91
Identity = 156/206 (75.73%), Postives = 183/206 (88.83%), Query Frame = 0


Query: 67  GSQADSFSPQTRAGVAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISKEGF 126
           G  + S SP      A  LP RF+VGHSIYKGKAALTV+PR PEF  LDSGAFK+SK+GF
Sbjct: 65  GDSSSSPSP------AEGLPARFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLSKDGF 124

Query: 127 VLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKI 186
           +LLQFAP+AGVRQYDWS+KQVFSLSVTE+G+LV+LGPRESCEFFHDP+KGKSDEGKVRK+
Sbjct: 125 LLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGKVRKV 184

Query: 187 LKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIAN 246
           LKVEPLPDGSGHFFNLSVQNKL+N+DESIYIPIT+AE+ VL+ AF F+LP+L+GWH  AN
Sbjct: 185 LKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFVLPYLIGWHAFAN 244

Query: 247 TIMRPEESSRVNNANPRYGGDFEWSR 273
           +I +PEE+SRVNNA+P YGGD+EW+R
Sbjct: 245 SI-KPEETSRVNNASPNYGGDYEWNR 263

[Close]

BLAST of Lag0004009 vs. ExPASy Swiss-Prot
Match: Q66GR6 (Single-stranded DNA-binding protein WHY3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WHY3 PE=1 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.6e-88
Identity = 157/215 (73.02%), Postives = 184/215 (85.58%), Query Frame = 0


Query: 59  QQQPPFEPGSQADSFSPQTRAGVAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGA 118
           +Q   FE     DS S Q     A    PRF+VGHSIYKGKAALT+EPR PEF  L+SGA
Sbjct: 59  RQSDYFEKQRFGDSSSSQN----AEVSSPRFYVGHSIYKGKAALTIEPRAPEFVALESGA 118

Query: 119 FKISKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGK- 178
           FK++KEGF+LLQFAPAAGVRQYDWSRKQVFSLSVTE+G+LV+LGPRESCEFFHDP+KGK 
Sbjct: 119 FKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKG 178

Query: 179 SDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFILPH 238
           SDEGKVRK+LKVEPLPDGSG FFNLSVQNKL+N+DES+YIPITKAE+ VL+ AF F+LPH
Sbjct: 179 SDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNFVLPH 238

Query: 239 LMGWHTIANTIMRPEESSRVNNANPRYGGDFEWSR 273
           L+GW   AN+I +PE+S+R+NNA+P+YGGD+EWSR
Sbjct: 239 LIGWSAFANSI-KPEDSNRLNNASPKYGGDYEWSR 268

[Close]

BLAST of Lag0004009 vs. ExPASy Swiss-Prot
Match: Q9LL85 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum OX=4113 GN=WHY1 PE=1 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.7e-85
Identity = 147/209 (70.33%), Postives = 177/209 (84.69%), Query Frame = 0


Query: 64  FEPGSQADSFSPQTRAGVAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISK 123
           FEP  Q      Q +     A  P+ FVG+SIYKGKAALTVEPR PEF+PLDSGAFK+S+
Sbjct: 71  FEPQQQQQQQQQQPQ----GASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSR 130

Query: 124 EGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKV 183
           EG V+LQFAPAAGVRQYDWSRKQVFSLSVTE+GS+++LG ++SCEFFHDP KG+SDEG+V
Sbjct: 131 EGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRV 190

Query: 184 RKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFILPHLMGWHT 243
           RK+LKVEPLPDGSGHFFNLSVQNKLIN+DE+IYIP+TKAE+ VLV AF F++P+L+GWHT
Sbjct: 191 RKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHT 250

Query: 244 IANTIMRPEESSRVNNANPRYGGDFEWSR 273
             N+  +PE++SR NNANPR G + EW+R
Sbjct: 251 AVNS-FKPEDASRSNNANPRSGAELEWNR 274

[Close]

BLAST of Lag0004009 vs. ExPASy Swiss-Prot
Match: B2LXS7 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays OX=4577 GN=WHY1 PE=2 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.8e-71
Identity = 122/185 (65.95%), Postives = 152/185 (82.16%), Query Frame = 0


Query: 88  RFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISKEGFVLLQFAPAAGVRQYDWSRKQV 147
           R F  +SIYKGKAAL+ +PRPP F PLDSGA+K++KEGFVLLQFAPA   RQYDW+RKQV
Sbjct: 85  RVFTSYSIYKGKAALSFDPRPPLFVPLDSGAYKVAKEGFVLLQFAPAVATRQYDWTRKQV 144

Query: 148 FSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSVQNK 207
           FSLSV E+G+L+ LGP +SCEFFHDP+KG+S+EGKVRK+LK+EP PDG+G FFNLSVQN+
Sbjct: 145 FSLSVWEIGTLLTLGPTDSCEFFHDPFKGRSEEGKVRKVLKIEPTPDGNGRFFNLSVQNR 204

Query: 208 LINMDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTIMRPEESSRVNNANPRYGGD 267
           LIN+DESIYIPITK E+ V+V  F +I+PHLMGW T  ++I +PEES     + P+   +
Sbjct: 205 LINVDESIYIPITKGEFAVIVSTFNYIIPHLMGWSTFVSSI-KPEESRPY--SRPQSTSE 264

Query: 268 FEWSR 273
           +EW R
Sbjct: 265 YEWRR 266

[Close]

BLAST of Lag0004009 vs. ExPASy Swiss-Prot
Match: Q8VYF7 (Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WHY2 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.7e-45
Identity = 88/195 (45.13%), Postives = 127/195 (65.13%), Query Frame = 0


Query: 80  GVAAALPP-RFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISKEGFVLLQFAPAAGVR 139
           G  AA P  R F  +SI+KGKAAL+VEP  P FT +DSG  +I + G +++ F PA G R
Sbjct: 44  GKDAAKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGER 103

Query: 140 QYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGH 199
           +YDW +KQ F+LS TE+GSL+++G ++S EFFHDP    S+ G+VRK L V+P  DGSG+
Sbjct: 104 KYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGY 163

Query: 200 FFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTIMRPEESSR-V 259
           F +LSV N ++  ++   +P+TKAE+ V+  AF F LPH+MGW+ +   +      SR V
Sbjct: 164 FISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGHVNTEALPSRNV 223

Query: 260 NNANPRYGGDFEWSR 273
           ++       + EW +
Sbjct: 224 SHLKTEPQLELEWDK 238

[Close]

BLAST of Lag0004009 vs. ExPASy TrEMBL
Match: A0A6J1DD66 (single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111019296 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 9.2e-137
Identity = 248/277 (89.53%), Postives = 257/277 (92.78%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPP-LNPELSLEP---CLNRRLCTLNSSRPLLTLTTTRKSSPKCQYSWN 60
           MLRLQWLSSSLLPP LNPELS E    C NRRLCTLNSSRPLLTLT TRK SPKCQYSW+
Sbjct: 1   MLRLQWLSSSLLPPLLNPELSPETSHLCPNRRLCTLNSSRPLLTLTATRKPSPKCQYSWS 60

Query: 61  TQQQQ-PPFEPGSQADSFSPQTRAGVAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLD 120
           TQQQQ PP EPGSQA SFSPQTRAG A ALPPRFFVGHSIYKGKA LTVEPRPPEFTPLD
Sbjct: 61  TQQQQPPPSEPGSQAHSFSPQTRAGAAGALPPRFFVGHSIYKGKAVLTVEPRPPEFTPLD 120

Query: 121 SGAFKISKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYK 180
           SGAFK+S+EGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALG R+SCEFFHDPYK
Sbjct: 121 SGAFKLSREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGLRDSCEFFHDPYK 180

Query: 181 GKSDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFIL 240
           GKS+EGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFIL
Sbjct: 181 GKSEEGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFIL 240

Query: 241 PHLMGWHTIANTIMRPEESSRVNNANPRYGGDFEWSR 273
           PHLMGWH I+NT+ R E+S RVNNANPRYGGDFEWSR
Sbjct: 241 PHLMGWHMISNTMTRAEDSGRVNNANPRYGGDFEWSR 277

[Close]

BLAST of Lag0004009 vs. ExPASy TrEMBL
Match: A0A5D3BP35 (Single-stranded DNA-binding protein WHY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00810 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.0e-135
Identity = 241/273 (88.28%), Postives = 252/273 (92.31%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPPLNPELSLEPCLNRRLCTLNSSRPLLTLTTTRKSSPKCQYSWNT-QQ 60
           MLRLQWLSSSLLP  NPELS E   N RLC+LN  RPLLTLTTTRK SPKCQYSWNT Q 
Sbjct: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60

Query: 61  QQPPFEPGSQADSFSPQTRAGVAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120
           QQ  FEP SQ DSFSPQ+RAG AAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF
Sbjct: 61  QQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120

Query: 121 KISKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSD 180
           KIS+EG V+LQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALGPRE+CEFFHDPYKGKSD
Sbjct: 121 KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD 180

Query: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFILPHLM 240
           EGKVRKILKVEPLPDGSGHFFNLSVQNKLIN+DESIYIPITKAEYTVLVEAFKFILPHLM
Sbjct: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM 240

Query: 241 GWHTIANTIMRPEESSRVNNANPRYGGDFEWSR 273
           GWHTIANT+ +PE+SSR N ANPRYGGDFEW+R
Sbjct: 241 GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 273

[Close]

BLAST of Lag0004009 vs. ExPASy TrEMBL
Match: A0A6J1KPI3 (single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111496070 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.0e-135
Identity = 241/276 (87.32%), Postives = 254/276 (92.03%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPPLNPELSLEPCLNRRLCTLNSSRPLLTLTTTRKSSPKCQY-SWNTQQ 60
           MLRLQWLSSSLLPPLNPEL  +PC N R C  NSSR L TLT TRK SPKCQY SWNT  
Sbjct: 1   MLRLQWLSSSLLPPLNPELCAQPCKNPRRCRFNSSRQLFTLTATRKPSPKCQYASWNT-- 60

Query: 61  QQPPFEPGSQADSFSPQTRAGVAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120
           QQP FEP SQ DS+SPQTRAG AAALPPRFFVGHSIYKGKAAL++EPRPPEFTP+DSGAF
Sbjct: 61  QQPAFEPASQTDSYSPQTRAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGAF 120

Query: 121 KISKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSD 180
           K+S++GFV+LQ APAAGVRQYDWSRKQVFSLS+TELGSLVALGPRESCEFFHDPYKGKSD
Sbjct: 121 KVSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKSD 180

Query: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFILPHLM 240
           EGKVRKILKVEPLPDGSGHFFNLSVQNKLIN+DESIYIPITKAEYTVLVEAFKFILPHLM
Sbjct: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM 240

Query: 241 GWHTIANTIMRPEESSRVNNANPRYG---GDFEWSR 273
           GWHTIANT+MRPE+SSRVNNANPRYG   GDFEWSR
Sbjct: 241 GWHTIANTMMRPEDSSRVNNANPRYGGESGDFEWSR 274

[Close]

BLAST of Lag0004009 vs. ExPASy TrEMBL
Match: A0A1S3C3B0 (single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103496412 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.0e-135
Identity = 241/273 (88.28%), Postives = 252/273 (92.31%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPPLNPELSLEPCLNRRLCTLNSSRPLLTLTTTRKSSPKCQYSWNT-QQ 60
           MLRLQWLSSSLLP  NPELS E   N RLC+LN  RPLLTLTTTRK SPKCQYSWNT Q 
Sbjct: 1   MLRLQWLSSSLLPTFNPELSPETLSNPRLCSLNFRRPLLTLTTTRKPSPKCQYSWNTHQH 60

Query: 61  QQPPFEPGSQADSFSPQTRAGVAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120
           QQ  FEP SQ DSFSPQ+RAG AAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF
Sbjct: 61  QQSSFEPASQTDSFSPQSRAGAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAF 120

Query: 121 KISKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSD 180
           KIS+EG V+LQFAPAAGVRQYDWSRKQVFSLSVTELGSL+ALGPRE+CEFFHDPYKGKSD
Sbjct: 121 KISREGLVMLQFAPAAGVRQYDWSRKQVFSLSVTELGSLIALGPREACEFFHDPYKGKSD 180

Query: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFILPHLM 240
           EGKVRKILKVEPLPDGSGHFFNLSVQNKLIN+DESIYIPITKAEYTVLVEAFKFILPHLM
Sbjct: 181 EGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHLM 240

Query: 241 GWHTIANTIMRPEESSRVNNANPRYGGDFEWSR 273
           GWHTIANT+ +PE+SSR N ANPRYGGDFEW+R
Sbjct: 241 GWHTIANTMTKPEDSSRGNTANPRYGGDFEWNR 273

[Close]

BLAST of Lag0004009 vs. ExPASy TrEMBL
Match: A0A6J1GJ86 (single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111454358 PE=3 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.1e-132
Identity = 240/277 (86.64%), Postives = 252/277 (90.97%), Query Frame = 0


Query: 1   MLRLQWLSSSLLPPLN-PELSLEPCLNRRLCTLNSSRPLLTLTTTRKSSPKCQY-SWNTQ 60
           MLRLQWLSSSLLPPLN PEL  +PC N R C  NSSR L TLT TRK SPKCQY SWNT 
Sbjct: 1   MLRLQWLSSSLLPPLNPPELCAQPCKNPRRCGFNSSRQLFTLTATRKPSPKCQYASWNT- 60

Query: 61  QQQPPFEPGSQADSFSPQTRAGVAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGA 120
            QQP FEP SQ DSFSPQT AG AAALPPRFFVGHSIYKGKAAL++EPRPPEFTP+DSGA
Sbjct: 61  -QQPAFEPASQTDSFSPQTSAGAAAALPPRFFVGHSIYKGKAALSIEPRPPEFTPIDSGA 120

Query: 121 FKISKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKS 180
           FK+S++GFV+LQ APAAGVRQYDWSRKQVFSLS+TELGSLVALGPRESCEFFHDPYKGKS
Sbjct: 121 FKVSRQGFVMLQLAPAAGVRQYDWSRKQVFSLSLTELGSLVALGPRESCEFFHDPYKGKS 180

Query: 181 DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFILPHL 240
           DEGKVRKILKVEPLPDGSGHFFNLSVQNKLIN+DESIYIPITKAEYTVLVEAFKFILPHL
Sbjct: 181 DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFILPHL 240

Query: 241 MGWHTIANTIMRPEESSRVNNANPRYGGD---FEWSR 273
           MGWHTIANT MRPE+SSRVNNANPRYGG+   FEWSR
Sbjct: 241 MGWHTIANTTMRPEDSSRVNNANPRYGGESGGFEWSR 275

[Close]

BLAST of Lag0004009 vs. TAIR 10
Match: AT1G14410.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 335.5 bits (859), Expect = 4.0e-92
Identity = 156/206 (75.73%), Postives = 183/206 (88.83%), Query Frame = 0


Query: 67  GSQADSFSPQTRAGVAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISKEGF 126
           G  + S SP      A  LP RF+VGHSIYKGKAALTV+PR PEF  LDSGAFK+SK+GF
Sbjct: 65  GDSSSSPSP------AEGLPARFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLSKDGF 124

Query: 127 VLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKI 186
           +LLQFAP+AGVRQYDWS+KQVFSLSVTE+G+LV+LGPRESCEFFHDP+KGKSDEGKVRK+
Sbjct: 125 LLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGKVRKV 184

Query: 187 LKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIAN 246
           LKVEPLPDGSGHFFNLSVQNKL+N+DESIYIPIT+AE+ VL+ AF F+LP+L+GWH  AN
Sbjct: 185 LKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAFNFVLPYLIGWHAFAN 244

Query: 247 TIMRPEESSRVNNANPRYGGDFEWSR 273
           +I +PEE+SRVNNA+P YGGD+EW+R
Sbjct: 245 SI-KPEETSRVNNASPNYGGDYEWNR 263

[Close]

BLAST of Lag0004009 vs. TAIR 10
Match: AT2G02740.2 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 329.7 bits (844), Expect = 2.2e-90
Identity = 156/214 (72.90%), Postives = 183/214 (85.51%), Query Frame = 0


Query: 59  QQQPPFEPGSQADSFSPQTRAGVAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGA 118
           +Q   FE     DS S Q     A    PRF+VGHSIYKGKAALT+EPR PEF  L+SGA
Sbjct: 59  RQSDYFEKQRFGDSSSSQN----AEVSSPRFYVGHSIYKGKAALTIEPRAPEFVALESGA 118

Query: 119 FKISKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKS 178
           FK++KEGF+LLQFAPAAGVRQYDWSRKQVFSLSVTE+G+LV+LGPRESCEFFHDP+KGK 
Sbjct: 119 FKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKG 178

Query: 179 DEGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFILPHL 238
           DEGKVRK+LKVEPLPDGSG FFNLSVQNKL+N+DES+YIPITKAE+ VL+ AF F+LPHL
Sbjct: 179 DEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNFVLPHL 238

Query: 239 MGWHTIANTIMRPEESSRVNNANPRYGGDFEWSR 273
           +GW   AN+I +PE+S+R+NNA+P+YGGD+EWSR
Sbjct: 239 IGWSAFANSI-KPEDSNRLNNASPKYGGDYEWSR 267

[Close]

BLAST of Lag0004009 vs. TAIR 10
Match: AT2G02740.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 326.6 bits (836), Expect = 1.9e-89
Identity = 157/215 (73.02%), Postives = 184/215 (85.58%), Query Frame = 0


Query: 59  QQQPPFEPGSQADSFSPQTRAGVAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGA 118
           +Q   FE     DS S Q     A    PRF+VGHSIYKGKAALT+EPR PEF  L+SGA
Sbjct: 59  RQSDYFEKQRFGDSSSSQN----AEVSSPRFYVGHSIYKGKAALTIEPRAPEFVALESGA 118

Query: 119 FKISKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGK- 178
           FK++KEGF+LLQFAPAAGVRQYDWSRKQVFSLSVTE+G+LV+LGPRESCEFFHDP+KGK 
Sbjct: 119 FKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKG 178

Query: 179 SDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFILPH 238
           SDEGKVRK+LKVEPLPDGSG FFNLSVQNKL+N+DES+YIPITKAE+ VL+ AF F+LPH
Sbjct: 179 SDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNFVLPH 238

Query: 239 LMGWHTIANTIMRPEESSRVNNANPRYGGDFEWSR 273
           L+GW   AN+I +PE+S+R+NNA+P+YGGD+EWSR
Sbjct: 239 LIGWSAFANSI-KPEDSNRLNNASPKYGGDYEWSR 268

[Close]

BLAST of Lag0004009 vs. TAIR 10
Match: AT1G71260.1 (WHIRLY 2 )

HSP 1 Score: 183.0 bits (463), Expect = 3.3e-46
Identity = 88/195 (45.13%), Postives = 127/195 (65.13%), Query Frame = 0


Query: 80  GVAAALPP-RFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISKEGFVLLQFAPAAGVR 139
           G  AA P  R F  +SI+KGKAAL+VEP  P FT +DSG  +I + G +++ F PA G R
Sbjct: 44  GKDAAKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGER 103

Query: 140 QYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGH 199
           +YDW +KQ F+LS TE+GSL+++G ++S EFFHDP    S+ G+VRK L V+P  DGSG+
Sbjct: 104 KYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGY 163

Query: 200 FFNLSVQNKLINMDESIYIPITKAEYTVLVEAFKFILPHLMGWHTIANTIMRPEESSR-V 259
           F +LSV N ++  ++   +P+TKAE+ V+  AF F LPH+MGW+ +   +      SR V
Sbjct: 164 FISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGHVNTEALPSRNV 223

Query: 260 NNANPRYGGDFEWSR 273
           ++       + EW +
Sbjct: 224 SHLKTEPQLELEWDK 238

The following BLAST results are available for this feature:

BLAST of Lag0004009 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151332.1	1.9e-136	89.53	single-stranded DNA-binding protein WHY1, chloroplastic-like [Momordica charanti...	[more]
XP_008456468.1	6.1e-135	88.28	PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucumis...	[more]
XP_023002109.1	6.1e-135	87.32	single-stranded DNA-binding protein WHY1, chloroplastic-like [Cucurbita maxima]	[more]
XP_038884311.1	1.8e-134	89.42	single-stranded DNA-binding protein WHY1, chloroplastic-like isoform X2 [Beninca...	[more]
XP_038884310.1	1.5e-133	89.45	single-stranded DNA-binding protein WHY1, chloroplastic-like isoform X1 [Beninca...	[more]

BLAST of Lag0004009 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9S3	5.6e-91	75.73	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q66GR6	2.6e-88	73.02	Single-stranded DNA-binding protein WHY3, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q9LL85	2.7e-85	70.33	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum OX=...	[more]
B2LXS7	3.8e-71	65.95	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays OX=4577 GN=W...	[more]
Q8VYF7	4.7e-45	45.13	Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana ...	[more]

BLAST of Lag0004009 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DD66	9.2e-137	89.53	single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Momordica charan...	[more]
A0A5D3BP35	3.0e-135	88.28	Single-stranded DNA-binding protein WHY1 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1KPI3	3.0e-135	87.32	single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucurbita maxima...	[more]
A0A1S3C3B0	3.0e-135	88.28	single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucumis melo OX=...	[more]
A0A6J1GJ86	1.1e-132	86.64	single-stranded DNA-binding protein WHY1, chloroplastic-like OS=Cucurbita moscha...	[more]

BLAST of Lag0004009 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14410.1	4.0e-92	75.73	ssDNA-binding transcriptional regulator	[more]
AT2G02740.2	2.2e-90	72.90	ssDNA-binding transcriptional regulator	[more]
AT2G02740.1	1.9e-89	73.02	ssDNA-binding transcriptional regulator	[more]
AT1G71260.1	3.3e-46	45.13	WHIRLY 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009044	ssDNA-binding transcriptional regulator	GENE3D	2.30.31.10	Transcriptional Coactivator Pc4; Chain A	coord: 81..253 e-value: 3.6E-77 score: 259.9
IPR009044	ssDNA-binding transcriptional regulator	SUPERFAMILY	54447	ssDNA-binding transcriptional regulator domain	coord: 87..272
IPR013742	Whirly transcription factor	PFAM	PF08536	Whirly	coord: 95..229 e-value: 1.5E-60 score: 203.0
IPR013742	Whirly transcription factor	PANTHER	PTHR31745	SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL	coord: 45..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..77
None	No IPR available	PANTHER	PTHR31745:SF2	SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC	coord: 45..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0004009.1	Lag0004009.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding