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Lag0003266 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGGAAGCACAGGAGAACGTTCTTTTGCTGATATTATCACCAGTATTCGATACTGGGTCATTCATAGCATTACTATACCTTCTCTATTCATTGCAGGTTGGTTATTCGTCAGCACGGGTTTAGCTTACGATGTTTTTGGAAGCCCTCGTCCAAATGAGTATTTTACAGAGAGCCGACAAGGAATTCCATTAATAACTGGCCGTTTTGATTCTTTGGAACAACTCGATGAATTTAGTAGATCTTTTTAGGAGGACCAAATGACTATCGATAAAACTTATCCTATTTTTACAGTGCGATGGTTGGCTGTTCACGGACTAGCTGTACCTACCGTTTCTTTTTTAGGGTCAATATCAGCAATGCAGTTCATCCAACGATAAACCTAATCCGAATTATAGAGCTATGACACAATCAAATCCGAACGAACAAAATGTTGAATTGAATCGTACCAGTCTTTACTGGGGGTTATTACTCATTTTTGTACTTGCTGTTTTATTTTCCAATTATTTCTTCAATTAAATAAAAGAAAATACTAAATAATAGTACGAATTATCTTATCCCATTCGGAAGGATATCATCTCATAATTATCTATGACTGTTTCTGTCTCTAGCACGACCACTTGATGAAATGGGGAGGGAAGTGGGACAAATGGCCGAGACTACTGGAAGGATTCCTCTTTGGATAATAGGTACTGTAACTGGTATTCCTGTGATCGGTTTAATCGGTATTTTCTTTTATGGTTCATATTCTGGATTAGGTTCATCTCTGTAA ATGTCTGGAAGCACAGGAGAACGTTCTTTTGCTGATATTATCACCAGTATTCGATACTGGGTCATTCATAGCATTACTATACCTTCTCTATTCATTGCAGCACGACCACTTGATGAAATGGGGAGGGAAGTGGGACAAATGGCCGAGACTACTGGAAGGATTCCTCTTTGGATAATAGGTACTGTAACTGGTATTCCTGTGATCGGTTTAATCGGTATTTTCTTTTATGGTTCATATTCTGGATTAGGTTCATCTCTGTAA ATGTCTGGAAGCACAGGAGAACGTTCTTTTGCTGATATTATCACCAGTATTCGATACTGGGTCATTCATAGCATTACTATACCTTCTCTATTCATTGCAGCACGACCACTTGATGAAATGGGGAGGGAAGTGGGACAAATGGCCGAGACTACTGGAAGGATTCCTCTTTGGATAATAGGTACTGTAACTGGTATTCCTGTGATCGGTTTAATCGGTATTTTCTTTTATGGTTCATATTCTGGATTAGGTTCATCTCTGTAA MSGSTGERSFADIITSIRYWVIHSITIPSLFIAARPLDEMGREVGQMAETTGRIPLWIIGTVTGIPVIGLIGIFFYGSYSGLGSSL Homology
BLAST of Lag0003266 vs. NCBI nr
Match: KAF4396260.1 (hypothetical protein F8388_019806 [Cannabis sativa]) HSP 1 Score: 124.8 bits (312), Expect = 3.6e-25 Identity = 74/132 (56.06%), Postives = 77/132 (58.33%), Query Frame = 0
BLAST of Lag0003266 vs. NCBI nr
Match: KAF4400822.1 (hypothetical protein G4B88_004365 [Cannabis sativa]) HSP 1 Score: 97.4 bits (241), Expect = 6.2e-17 Identity = 76/193 (39.38%), Postives = 79/193 (40.93%), Query Frame = 0
BLAST of Lag0003266 vs. NCBI nr
Match: QHN53650.1 (photosystem II protein J [Parietaria debilis]) HSP 1 Score: 95.9 bits (237), Expect = 1.8e-16 Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 0
BLAST of Lag0003266 vs. NCBI nr
Match: YP_009572284.1 (photosystem II protein J [Debregeasia orientalis] >QBE86196.1 photosystem II protein J [Debregeasia orientalis] >QZF76232.1 photosystem II protein J [Debregeasia hekouensis] >QZF76315.1 photosystem II protein J [Debregeasia hekouensis] >QZF76398.1 photosystem II protein J [Debregeasia hekouensis]) HSP 1 Score: 95.9 bits (237), Expect = 1.8e-16 Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 0
BLAST of Lag0003266 vs. NCBI nr
Match: YP_009525200.1 (photosystem II protein J [Hodgsonia macrocarpa] >QWQ50111.1 photosystem II protein J [Cyclanthera pedata] >AXR94548.1 photosystem II protein J [Hodgsonia macrocarpa] >AXR94634.1 photosystem II protein J [Hodgsonia macrocarpa] >AXR94718.1 photosystem II protein J [Hodgsonia macrocarpa] >AXR94803.1 photosystem II protein J [Hodgsonia macrocarpa]) HSP 1 Score: 95.9 bits (237), Expect = 1.8e-16 Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0
BLAST of Lag0003266 vs. ExPASy Swiss-Prot
Match: Q09MG4 (Photosystem II reaction center protein J OS=Citrus sinensis OX=2711 GN=psbJ PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.3e-14 Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0
BLAST of Lag0003266 vs. ExPASy Swiss-Prot
Match: Q2QD75 (Photosystem II reaction center protein J OS=Cucumis sativus OX=3659 GN=psbJ PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.3e-14 Identity = 38/40 (95.00%), Postives = 40/40 (100.00%), Query Frame = 0
BLAST of Lag0003266 vs. ExPASy Swiss-Prot
Match: A0ZZ49 (Photosystem II reaction center protein J OS=Gossypium barbadense OX=3634 GN=psbJ PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.3e-14 Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0
BLAST of Lag0003266 vs. ExPASy Swiss-Prot
Match: Q2L920 (Photosystem II reaction center protein J OS=Gossypium hirsutum OX=3635 GN=psbJ PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.3e-14 Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0
BLAST of Lag0003266 vs. ExPASy Swiss-Prot
Match: Q14FE3 (Photosystem II reaction center protein J OS=Populus alba OX=43335 GN=psbJ PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.3e-14 Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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