
Lag0003223 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAGGCAAGGAGTCGGCAAAGTGTGTGATGGATTATCCAAAGAAGTCAAACAAAATCAGAGACATTGTAAGGCTTCAACAAATCCTGAAGAAGTGGAAGAGGTTAGCAAATGGTCAAAAGAGCAGCAGCAATAGTAATACATGTTGTTCGAGCAACAGCAACAAAGGCATCAAGTTCTTAAAGACAAGCCTTTCGTTTACGGAGGCTGTTCCAAAAGGGTATCTGGCAGTGTGTGTTGGGAAAGAACTCAAGAGATTTGTAATCCCCACCCATTACCTGACTCACCAAGCATTCCGAATGTTGCTGCGGGAAGCTGAAGAAGAATTCGGTTTTCAGCAGGAGGGTGTCCTTCAGATTCCATGCGATGTCTCTGTCTTTGAAAATATCCTCAACACTGTCCAACATAACCACCAACCTCTCTTCTTTCAGAATCATCCTGCTCCTGATAATGAAATCATTGGACTTTCCTGCTCGCCTGATTGTGAGCTCAGGCCTCATCATCATCCTCAAATGTGTACATGA ATGCTAGGCAAGGAGTCGGCAAAGTGTGTGATGGATTATCCAAAGAAGTCAAACAAAATCAGAGACATTGTAAGGCTTCAACAAATCCTGAAGAAGTGGAAGAGGTTAGCAAATGGTCAAAAGAGCAGCAGCAATAGTAATACATGTTGTTCGAGCAACAGCAACAAAGGCATCAAGTTCTTAAAGACAAGCCTTTCGTTTACGGAGGCTGTTCCAAAAGGGTATCTGGCAGTGTGTGTTGGGAAAGAACTCAAGAGATTTGTAATCCCCACCCATTACCTGACTCACCAAGCATTCCGAATGTTGCTGCGGGAAGCTGAAGAAGAATTCGGTTTTCAGCAGGAGGGTGTCCTTCAGATTCCATGCGATGTCTCTGTCTTTGAAAATATCCTCAACACTGTCCAACATAACCACCAACCTCTCTTCTTTCAGAATCATCCTGCTCCTGATAATGAAATCATTGGACTTTCCTGCTCGCCTGATTGTGAGCTCAGGCCTCATCATCATCCTCAAATGTGTACATGA ATGCTAGGCAAGGAGTCGGCAAAGTGTGTGATGGATTATCCAAAGAAGTCAAACAAAATCAGAGACATTGTAAGGCTTCAACAAATCCTGAAGAAGTGGAAGAGGTTAGCAAATGGTCAAAAGAGCAGCAGCAATAGTAATACATGTTGTTCGAGCAACAGCAACAAAGGCATCAAGTTCTTAAAGACAAGCCTTTCGTTTACGGAGGCTGTTCCAAAAGGGTATCTGGCAGTGTGTGTTGGGAAAGAACTCAAGAGATTTGTAATCCCCACCCATTACCTGACTCACCAAGCATTCCGAATGTTGCTGCGGGAAGCTGAAGAAGAATTCGGTTTTCAGCAGGAGGGTGTCCTTCAGATTCCATGCGATGTCTCTGTCTTTGAAAATATCCTCAACACTGTCCAACATAACCACCAACCTCTCTTCTTTCAGAATCATCCTGCTCCTGATAATGAAATCATTGGACTTTCCTGCTCGCCTGATTGTGAGCTCAGGCCTCATCATCATCCTCAAATGTGTACATGA MLGKESAKCVMDYPKKSNKIRDIVRLQQILKKWKRLANGQKSSSNSNTCCSSNSNKGIKFLKTSLSFTEAVPKGYLAVCVGKELKRFVIPTHYLTHQAFRMLLREAEEEFGFQQEGVLQIPCDVSVFENILNTVQHNHQPLFFQNHPAPDNEIIGLSCSPDCELRPHHHPQMCT Homology
BLAST of Lag0003223 vs. NCBI nr
Match: XP_008462190.1 (PREDICTED: auxin-responsive protein SAUR71-like [Cucumis melo] >KAA0059328.1 auxin-responsive protein SAUR71-like [Cucumis melo var. makuwa] >TYK03999.1 auxin-responsive protein SAUR71-like [Cucumis melo var. makuwa]) HSP 1 Score: 211.8 bits (538), Expect = 4.6e-51 Identity = 112/166 (67.47%), Postives = 132/166 (79.52%), Query Frame = 0
BLAST of Lag0003223 vs. NCBI nr
Match: XP_038899517.1 (auxin-responsive protein SAUR71-like [Benincasa hispida]) HSP 1 Score: 207.6 bits (527), Expect = 8.6e-50 Identity = 114/166 (68.67%), Postives = 127/166 (76.51%), Query Frame = 0
BLAST of Lag0003223 vs. NCBI nr
Match: XP_004141833.2 (auxin-responsive protein SAUR40 [Cucumis sativus]) HSP 1 Score: 203.8 bits (517), Expect = 1.2e-48 Identity = 112/174 (64.37%), Postives = 130/174 (74.71%), Query Frame = 0
BLAST of Lag0003223 vs. NCBI nr
Match: KGN45404.1 (hypothetical protein Csa_015702 [Cucumis sativus]) HSP 1 Score: 203.8 bits (517), Expect = 1.2e-48 Identity = 112/174 (64.37%), Postives = 130/174 (74.71%), Query Frame = 0
BLAST of Lag0003223 vs. NCBI nr
Match: XP_002316430.1 (auxin-responsive protein SAUR72 [Populus trichocarpa] >PNT18667.1 hypothetical protein POPTR_010G253800 [Populus trichocarpa]) HSP 1 Score: 201.1 bits (510), Expect = 8.1e-48 Identity = 111/184 (60.33%), Postives = 130/184 (70.65%), Query Frame = 0
BLAST of Lag0003223 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.7e-11 Identity = 41/116 (35.34%), Postives = 73/116 (62.93%), Query Frame = 0
BLAST of Lag0003223 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.7e-11 Identity = 41/121 (33.88%), Postives = 63/121 (52.07%), Query Frame = 0
BLAST of Lag0003223 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.1e-10 Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 0
BLAST of Lag0003223 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.1e-10 Identity = 38/110 (34.55%), Postives = 68/110 (61.82%), Query Frame = 0
BLAST of Lag0003223 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10 Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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