Lag0003219 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0003219
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr4: 49118412 .. 49123103 (+)
RNA-Seq ExpressionLag0003219
SyntenyLag0003219
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTATACTCCTAGGGCGTGCCCCAATGGCGTCTATTCATCGAAAAGTCCTTGTAGGAGTGACAATGCCTATACTCCTAGGGCGCGCCCCGTGGCATCTACTCATCAAAATTCCTTGTAGGAGTGGCAACACCTATACTCCTAGGGCGCTCCCCGAGGTCAGCAGCTTATAAAAATGTCCTTATAGGAGTTGCGACACCTACACAGGGGGCTTCAAAATAGTAACCACACTTGTAGTTGAGACCAAGGCCTAAGATATTTCGCCAGAAAATTCTTTTTGCAAGATAACAAATTGGCACAAGGAGAAATTATACTCTTATTATACTCTTAAATTGGGCTTAAGACTTATATCAACTGGCCACCCCTGAATCCCAATTCAAGAGTGGGGGCTTAATGTTATGGGTAAATTTGGACCTAGCTCTAAGAAAGTCAGAATGATAGAAGCCTATAGGAGAAACAAGCCCACAGAGGCCCAATAGGCCTAAATCAATCTCTAGGGCTACTCACTCTCCTAAAAGAAGGAGAAAACCCTAATTTCAGCTATAAATAGAAGAGGTTCACCCCAAGTTAAGGGGACTCCACTTGGTATCTATTTTCTTCCTCCAGATTATGACTTTATTTGCTTCGCTTATGATCTCCCAACTGACTTAAGCATCGGAGTCGGTGTGGCAACCACCACACCGGTACTTAGTTTTCTCTTGTTTTGCAGTTGCTTTGCAGGCCACGTCTTCCCCATTCAAATAAATTTACCGTTGATGTCACGAGAAGGTCAGGTTAATCCCTTGGCCAAATTTTGGCATCAACATCCATGATTGTCCCTTGTTGTTTATTAAAAATATATTTAAATGTCCCTTGTTGTTGGATTTTGGCGTAAATGTGTGAAAGAAAGTGGTAGCCAATTTATCAAAGTTTCAAAACATTTGCTTAAATGATGATTTTAATGTCAGGAAATCAAATATTTTGCAGACGACAGCTTAATATTGTGCAGAGCAGAAGAAAAGGATTGCATGACAATAAAGAGAATCCTACATACCTACGAAGAAGCCTCGGGACAAACGATCAACATGGAAAAATCATCCCTAATGACAAGCAAAAATATTCCTAGAGACAAAGCGGAAAAGCTAAGTGAGATCCTGGGTATAACAAAGCAGGGGCGGATCTATTAAGGAGCCAGGAGGGGCACGTGCCCCCTCAATTTATCGAGTTTTTGTTGTTTGTATACAATGAAAATTGATATTTTAATAATTAATACTAAATTTGCGACTCTGGTATCACGCGTGCCCTCCTCGCTTCGTTGGTATCAACTGAATTTTGCATACGTCCGGTCTTGAGTTCGATCCACAATCTATATATTTTTTATAGGGGTGTTCATCTTCAGACCGAAAACCGACCGAACCGACGTCGGTCGGTCGGTTAGCCGACCAAGTCGGTCGGTGTCGGTTCTTAGATTGAGGAGGTCGGTCGGTCGGCCAAACAATTTTACACATAACCGACCGACCGACCGACCGATATATTTATATATAAAAAAAAACCAATTTTTTTTAAAAAAACACATAACCGACCGACCGCCAAATATATTTATATATAAAAAACAATTTAAAAAAAAAAACACACATAATTTACCGACCGACCGACCGATTTTACACATGGGACCGACCGTCGTTCTTCATCTCAATTCTCATGATCTTTAAAAAAACCGACCAAACCGACCGTTCGGTCGGTCGGCTGGCAACACCCATCGAAATTTGTCGGTTTCACAATTTCTGGAAAACCGACCGACCGATGAACACCCCTAATTTTTTATAAGCTGGCTTTTTTTTCCCAAGAAGTCAACGTGCCTCTGAATTTATTATTTAATTATAATTCTTTTTTTTTTAAATAATTATAATTCATTTGATATATCAGTTTTTCTTTTTGAAATTTTACTTCAGTTTTTTTCTTTTGTTTTTTTTTTTTTAAATTTTAATAGTATTCTTCTAGTAAGTTTTTTTAATTATCATTATAATTATTTTGATTTGCTTTTATTCTAAGACTTTAATTCAGTTTTTTAATTTAATAGTTTTCTTTATTAAACAATTTTTTTTAATTAAATAAAACTTATAATCAAGCCTCGTTTTACCTTAAAAAGAATATACTAAACATTTCAAATTTAATTCCTTAATATCAAACAAATTTGTTGTCATATAGTTTTATATTTAATATTACTTAATTTAAACAGGTATAATTACAAGTTTAATAACTTAACTTTCAAGTTTGTGTCTTTGTTCTTTAGACTTAAAAATAATATCTGAATCTCTACATTTTCAATTTTGTGTCTAATAGATCATTGAAGTTTAAAAATATCTAATAGATTATCGAAATTTCAATTTTGTAACCAATAAGCCTTTGACATATTCATAATTTTATAAAATTAGTTGATGTATTAGATATAAAATCGAAATTTATATCTAATTGGACCTTAAATTTTTAATTTTGCGTCTGGTAGGTTTGTTAATTTTAATAAAAGTTGAATAAGTCAAGAACCTAGACACAAAATTGAAAATTCAGGGACGTAATAGACACAAAATTGAAATTTTAAGGACATATTAGCCCATTTTTAAAGTTTAGGGGCCTATTAGACACAAAATTTAAAAAGCAAGGACCTATTACATACTTTTGAAAGTTTATGGACTAAATTTGTAATTTAAACATTTGAATATTATGTATAGAAACAAGTACATTAGACACGAATACAATATTGTAGTTAAAAACAGATTTGTGCCCCTCCTAACATAAAATTTTGGATCCGCCACTGACATTGGTTGAAGAGTTAGGTTACTATCTGGGGATGCCTTCCAAACAAAGAGGAACAAGAAAGATGTCTTCAGGAAGGTCAAAGATCGGGTTTGGAAAGCTCTTCAAAACTGGAAAGGAAGATTTTTCTCAGCAGGGGGAAAAAAGATACTCATAAAAGCAATCGTTCAGGCAATATCGACTTATACTATGAGTTGCTTCAAACTCCCCACAACCTATGCGACGAGATCAACAAAAGTGTGCTAGATTTTGGTGGGGAGAAGCAAAAGGAAAGAGTAAGGCTCACTGGATAAGTTGGAAGAAACTATGTGTTAGTAAAGACAGAGGAGGGCTCAAATTTAGAGATTTAAAACTCTTTAACCAAGCCATGTTAGCAAAAGTAAGTTGGAGGATTCTAAAATACCCCAATAGTCTTCTCTCCAAAGTGCTTAAAGGAAAATATTTCAAAGGGAGGGACTTCTTAACAGCTCCTCTGGGATCAAACCCGTCATTAACATGGAGAAGCATTATTTGGGGGCGTGATCTATTTAAAAAAGGTTATCGGTGGAAGGTAGGGAATGGAAAGCATATTTTAATTGACCAGGACCCGTGGCTTGACAGTGAAGGCAGTAAAATCCTTTATAATTAGCAACGAGCTACAAGGGAAGAGAGTCCATGAGGTTATAGATGATCAGGGGAACTGGATAGCTGGAAAAATCTTGGAAAACTTCACCACCTTAGATGCTGAAACAATTTTAACACCCCAGTTGGAGGAAGATACGAGGTGGATGAAATTATATGGAGCATAGAAAAAAAAGGAATTTTCACTATAAATAGTGCATACCTCTCTTACCCATCTCAGGCATCAACATCAACAGAATCAACATACAACAAAGAATGGAGGAAGTTTTGGAAGATAGAGCCATCCCAAAAGCAAAAATTTGTGTATGGCGGATACTTCACGATTCAATCCCAACAAAACTTAACATTTCGAAAAAAGGAATAGTCACAAACACTTTTTGTTCTTTTTGCAGGACATATGAAGAATGACCAAACATATACTTTGGGATTGTAAGTTAGTTAAAAACTCTAGAAGAATTATATTCCCCTCACGATGAGTCTTTTTCCTTGAATAGGAACAACTGGAACCCGTCGGATTATTGGACGTGGATGATGGAAAAATTGAAGGAAGAAGAACTCGAGAAAGCAATTATGATGTTGTGGAGCTTATGGAATTACATAAACAAAATCAACCAATCATGAAGCAGACCAGACAAGAGTTCACTAATGAGATCGATTGAGCAAACTTAGATTTGAGGGAGGTTGAGCAAAGTTTGTACCCGAAGTCCCAGCAGCGAGGCGCAAGGCCGAGTTAAAGACCCTCACGAGTCAAGTGAGATGGATACCACTGCCGGTAAATGCTGGAAGTTGAATACAGGCGCGTCCTGGAATGAAAAAGAGAAAGCAGGTGGAATCAGCTGGATTCTACGTGACTCTTCAAGGTATTCTATCTGTTTGGGATTCCAACAGATCAACAAAAATTGGCCAATAAAATTCATGGAAATGAAGGCGATTTTAGAAGGATTGAAGAACATACCTTCAACTGGCCTTGTGAATGGCAACCTGCCTCTGTTCCCATCTTCGTAGAATCTGACGCCTCAAATGTAGTTAAGATACTTAATGGCAAAGATGAGGATATCTCGGAGATCTCATTCCTTACCGAAGAGATAAGTCGCTTGAAGAATCGATTTCAAGAGATTCATTTCGACTACTGCCCAAGAGAACAAAACGCAACTGCGATCGTCTGGCGCGTTTCTCTGTTTCTTCCCCCATGTATTATGTTTTGGACTCCCCTGCGCTGGTGGAACGATAATGGGCTTCTGGCGGGGGTATCCCCCTTTGGATTAGAAACCTCTTAA

mRNA sequence

ATGCCTATACTCCTAGGGCGTGCCCCAATGGCGTCTATTCATCGAAAAGTCCTTGTAGGAGTGACAATGCCTATACTCCTAGGGCGCGCCCCGTGGCATCTACTCATCAAAATTCCTTGTAGGAGTGGCAACACCTATACTCCTAGGGCGCTCCCCGAGTTGCTTTGCAGGCCACGTCTTCCCCATTCAAATAAATTTACCGTTGATGTCACGAGAAGGTCAGACGACAGCTTAATATTGTGCAGAGCAGAAGAAAAGGATTGCATGACAATAAAGAGAATCCTACATACCTACGAAGAAGCCTCGGGACAAACGATCAACATGGAAAAATCATCCCTAATGACAAGCAAAAATATTCCTAGAGACAAAGCGGAAAAGCTAAGTGAGATCCTGGGGGTGTTCATCTTCAGACCGAAAACCGACCGAACCGACGTCGGTCGGTCGGTTAGCCGACCAAGTCGGTCGGTGTCGGTTCTTAGATTGAGGAGGACCCGTGGCTTGACAGTGAAGGCAGTAAAATCCTTTATAATTAGCAACGAGCTACAAGGGAAGAGAGTCCATGAGGTTATAGATGATCAGGGGAACTGGATAGCTGGAAAAATCTTGGAAAACTTCACCACCTTAGATGCTGAAACAATTTTAACACCCCAGTTGGAGGAAGATACGAGTCCCAGCAGCGAGGCGCAAGGCCGAGTTAAAGACCCTCACGAGTCAAGTGAGATGGATACCACTGCCGATCAACAAAAATTGGCCAATAAAATTCATGGAAATGAAGGCGATTTTAGAAGGATTGAAGAACATACCTTCAACTGGCCTTGTGAATGGCAACCTGCCTCTGTTCCCATCTTCGTAGAATCTGACGCCTCAAATGTAGTTAAGATACTTAATGGCAAAGATGAGGATATCTCGGAGATCTCATTCCTTACCGAAGAGATAAGTCGCTTGAAGAATCGATTTCAAGAGATTCATTTCGACTACTGCCCAAGAGAACAAAACGCAACTGCGATCGTCTGGCGCGTTTCTCTGTTTCTTCCCCCATGTATTATGTTTTGGACTCCCCTGCGCTGGTGGAACGATAATGGGCTTCTGGCGGGGGTATCCCCCTTTGGATTAGAAACCTCTTAA

Coding sequence (CDS)

ATGCCTATACTCCTAGGGCGTGCCCCAATGGCGTCTATTCATCGAAAAGTCCTTGTAGGAGTGACAATGCCTATACTCCTAGGGCGCGCCCCGTGGCATCTACTCATCAAAATTCCTTGTAGGAGTGGCAACACCTATACTCCTAGGGCGCTCCCCGAGTTGCTTTGCAGGCCACGTCTTCCCCATTCAAATAAATTTACCGTTGATGTCACGAGAAGGTCAGACGACAGCTTAATATTGTGCAGAGCAGAAGAAAAGGATTGCATGACAATAAAGAGAATCCTACATACCTACGAAGAAGCCTCGGGACAAACGATCAACATGGAAAAATCATCCCTAATGACAAGCAAAAATATTCCTAGAGACAAAGCGGAAAAGCTAAGTGAGATCCTGGGGGTGTTCATCTTCAGACCGAAAACCGACCGAACCGACGTCGGTCGGTCGGTTAGCCGACCAAGTCGGTCGGTGTCGGTTCTTAGATTGAGGAGGACCCGTGGCTTGACAGTGAAGGCAGTAAAATCCTTTATAATTAGCAACGAGCTACAAGGGAAGAGAGTCCATGAGGTTATAGATGATCAGGGGAACTGGATAGCTGGAAAAATCTTGGAAAACTTCACCACCTTAGATGCTGAAACAATTTTAACACCCCAGTTGGAGGAAGATACGAGTCCCAGCAGCGAGGCGCAAGGCCGAGTTAAAGACCCTCACGAGTCAAGTGAGATGGATACCACTGCCGATCAACAAAAATTGGCCAATAAAATTCATGGAAATGAAGGCGATTTTAGAAGGATTGAAGAACATACCTTCAACTGGCCTTGTGAATGGCAACCTGCCTCTGTTCCCATCTTCGTAGAATCTGACGCCTCAAATGTAGTTAAGATACTTAATGGCAAAGATGAGGATATCTCGGAGATCTCATTCCTTACCGAAGAGATAAGTCGCTTGAAGAATCGATTTCAAGAGATTCATTTCGACTACTGCCCAAGAGAACAAAACGCAACTGCGATCGTCTGGCGCGTTTCTCTGTTTCTTCCCCCATGTATTATGTTTTGGACTCCCCTGCGCTGGTGGAACGATAATGGGCTTCTGGCGGGGGTATCCCCCTTTGGATTAGAAACCTCTTAA

Protein sequence

MPILLGRAPMASIHRKVLVGVTMPILLGRAPWHLLIKIPCRSGNTYTPRALPELLCRPRLPHSNKFTVDVTRRSDDSLILCRAEEKDCMTIKRILHTYEEASGQTINMEKSSLMTSKNIPRDKAEKLSEILGVFIFRPKTDRTDVGRSVSRPSRSVSVLRLRRTRGLTVKAVKSFIISNELQGKRVHEVIDDQGNWIAGKILENFTTLDAETILTPQLEEDTSPSSEAQGRVKDPHESSEMDTTADQQKLANKIHGNEGDFRRIEEHTFNWPCEWQPASVPIFVESDASNVVKILNGKDEDISEISFLTEEISRLKNRFQEIHFDYCPREQNATAIVWRVSLFLPPCIMFWTPLRWWNDNGLLAGVSPFGLETS
Homology
[Close]
BLAST of Lag0003219 vs. NCBI nr
Match: XP_033143372.1 (uncharacterized protein LOC117132671 [Brassica rapa])

HSP 1 Score: 67.0 bits (162), Expect = 3.9e-07
Identity = 32/91 (35.16%), Postives = 57/91 (62.64%), Query Frame = 0 

Query: 74  SDDSLILCRAEEKDCMTIKRILHTYEEASGQTINMEKSSLMTSKNIPRDKAEKLSEILGV 133
           +DDSL LC+A+E+ C+ +K IL  YE A+GQ IN+EKSS+   K + +++ +++ EI G+
Sbjct: 106 ADDSLFLCKADEEQCINLKDILRRYERATGQAINVEKSSIAFGKKVAKERIKQIQEIFGI 165

Query: 134 FIFRPKTDRTDVGRSVSRPSRSVSVLRLRRT 165
           +      D      +++ P  ++S  +L +T
Sbjct: 166 YKKGGGKDILIKSVALAMPIYAMSCFKLPKT 196

[Close]
BLAST of Lag0003219 vs. NCBI nr
Match: XP_021838584.1 (uncharacterized protein LOC110778326 [Spinacia oleracea])

HSP 1 Score: 66.2 bits (160), Expect = 6.7e-07
Identity = 30/60 (50.00%), Postives = 44/60 (73.33%), Query Frame = 0 

Query: 74  SDDSLILCRAEEKDCMTIKRILHTYEEASGQTINMEKSSLMTSKNIPRDKAEKLSEILGV 133
           +DDS+I CRA+ +D   +KR+L  YEEASGQ INM+KS +  S N+ +++  +L+E LGV
Sbjct: 454 ADDSIIFCRADNRDIQALKRVLLCYEEASGQKINMQKSEITMSSNMSQERKVELAESLGV 513

[Close]
BLAST of Lag0003219 vs. NCBI nr
Match: CAA7024597.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 65.9 bits (159), Expect = 8.7e-07
Identity = 29/60 (48.33%), Postives = 42/60 (70.00%), Query Frame = 0 

Query: 74  SDDSLILCRAEEKDCMTIKRILHTYEEASGQTINMEKSSLMTSKNIPRDKAEKLSEILGV 133
           +DD++  C++ +K+C T+ RIL TYEEASGQ IN+ KSS+  +K    +  EK  EILG+
Sbjct: 106 ADDTMFFCKSNQKNCETLNRILKTYEEASGQMINLRKSSITFAKKTSSETMEKAKEILGI 165

[Close]
BLAST of Lag0003219 vs. NCBI nr
Match: PNX92542.1 (ribonuclease H [Trifolium pratense])

HSP 1 Score: 65.1 bits (157), Expect = 1.5e-06
Identity = 38/118 (32.20%), Postives = 62/118 (52.54%), Query Frame = 0 

Query: 70  VTRRSDDSLILCRAEEKDCMTIKRILHTYEEASGQTINMEKSSLMTSKNIPRDKAEKLSE 129
           +T   DD  + C A   +   + RILHTYE+ASGQ IN+ KS +  S+N+     E LS 
Sbjct: 772 ITPERDDCFLFCMANFTEVNQLLRILHTYEQASGQEINLSKSEVFISRNLSHADKEDLSG 831

Query: 130 ILGVFIFRPKTDRTDVGRSVSRPSRSVSVLRLRRTRGLTVKAVKSFIISNELQGKRVH 188
           ILGV        R  +GR++S+  + V +  +       ++A+ S+++     G+ +H
Sbjct: 832 ILGV--------RHVLGRALSKAGKEVMIKSV-------LQAIPSYVMRGSNNGRGIH 874

[Close]
BLAST of Lag0003219 vs. NCBI nr
Match: XP_018475243.1 (PREDICTED: uncharacterized protein LOC108846507 [Raphanus sativus])

HSP 1 Score: 64.3 bits (155), Expect = 2.5e-06
Identity = 33/59 (55.93%), Postives = 40/59 (67.80%), Query Frame = 0 

Query: 75  DDSLILCRAEEKDCMTIKRILHTYEEASGQTINMEKSSLMTSKNIPRDKAEKLSEILGV 134
           DDSLIL RA E  CM I+R+L  YEE SGQ IN+ KSS+   KNI   +  K+ EILG+
Sbjct: 130 DDSLILVRACETQCMEIRRLLKVYEENSGQMINLAKSSITFGKNIELTRKTKIKEILGI 188

[Close]
BLAST of Lag0003219 vs. ExPASy TrEMBL
Match: A0A2N9FNT0 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16695 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-07
Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = 0 

Query: 74  SDDSLILCRAEEKDCMTIKRILHTYEEASGQTINMEKSSLMTSKNIPRDKAEKLSEILGV 133
           +DDSL+ CRA   +C  I+ IL TYE+ASGQ +N  K++L  SKN P+ K E++ EILGV
Sbjct: 770 ADDSLLFCRASLPECQKIQEILTTYEKASGQQLNRAKTTLFFSKNTPQAKQEEIKEILGV 829

[Close]
BLAST of Lag0003219 vs. ExPASy TrEMBL
Match: A0A2N9GFR8 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25983 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.2e-07
Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 0 

Query: 74  SDDSLILCRAEEKDCMTIKRILHTYEEASGQTINMEKSSLMTSKNIPRDKAEKLSEILGV 133
           SDDSL+ CRA   +C  I+ IL  YE+ASGQ +N  K++L  SKN P+ K E++ EILGV
Sbjct: 723 SDDSLLFCRASLPECQKIQEILTIYEKASGQQLNRAKTTLFFSKNTPQAKQEEIKEILGV 782

[Close]
BLAST of Lag0003219 vs. ExPASy TrEMBL
Match: A0A6D2I7R7 (Reverse transcriptase domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS11832 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.2e-07
Identity = 29/60 (48.33%), Postives = 42/60 (70.00%), Query Frame = 0 

Query: 74  SDDSLILCRAEEKDCMTIKRILHTYEEASGQTINMEKSSLMTSKNIPRDKAEKLSEILGV 133
           +DD++  C++ +K+C T+ RIL TYEEASGQ IN+ KSS+  +K    +  EK  EILG+
Sbjct: 106 ADDTMFFCKSNQKNCETLNRILKTYEEASGQMINLRKSSITFAKKTSSETMEKAKEILGI 165

[Close]
BLAST of Lag0003219 vs. ExPASy TrEMBL
Match: A0A2K3MP39 (Ribonuclease H OS=Trifolium pratense OX=57577 GN=L195_g015681 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.2e-07
Identity = 38/118 (32.20%), Postives = 62/118 (52.54%), Query Frame = 0 

Query: 70  VTRRSDDSLILCRAEEKDCMTIKRILHTYEEASGQTINMEKSSLMTSKNIPRDKAEKLSE 129
           +T   DD  + C A   +   + RILHTYE+ASGQ IN+ KS +  S+N+     E LS 
Sbjct: 772 ITPERDDCFLFCMANFTEVNQLLRILHTYEQASGQEINLSKSEVFISRNLSHADKEDLSG 831

Query: 130 ILGVFIFRPKTDRTDVGRSVSRPSRSVSVLRLRRTRGLTVKAVKSFIISNELQGKRVH 188
           ILGV        R  +GR++S+  + V +  +       ++A+ S+++     G+ +H
Sbjct: 832 ILGV--------RHVLGRALSKAGKEVMIKSV-------LQAIPSYVMRGSNNGRGIH 874

[Close]
BLAST of Lag0003219 vs. ExPASy TrEMBL
Match: A0A2N9ESR2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5496 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.2e-07
Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 0 

Query: 74   SDDSLILCRAEEKDCMTIKRILHTYEEASGQTINMEKSSLMTSKNIPRDKAEKLSEILGV 133
            +DDSL+ CRA  ++C  I+ IL  YE+ASGQ +N EK++L  S+N P+   E+L +ILGV
Sbjct: 1014 ADDSLLFCRATREECQKIQHILWLYEKASGQKLNREKTTLFFSRNTPQAMQEELKDILGV 1073

The following BLAST results are available for this feature:
BLAST of Lag0003219 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_033143372.13.9e-0735.16uncharacterized protein LOC117132671 [Brassica rapa][more]
XP_021838584.16.7e-0750.00uncharacterized protein LOC110778326 [Spinacia oleracea][more]
CAA7024597.18.7e-0748.33unnamed protein product [Microthlaspi erraticum][more]
PNX92542.11.5e-0632.20ribonuclease H [Trifolium pratense][more]
XP_018475243.12.5e-0655.93PREDICTED: uncharacterized protein LOC108846507 [Raphanus sativus][more]
BLAST of Lag0003219 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0003219 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2N9FNT01.4e-0753.33RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16695 ... [more]
A0A2N9GFR83.2e-0753.33RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25983 ... [more]
A0A6D2I7R74.2e-0748.33Reverse transcriptase domain-containing protein OS=Microthlaspi erraticum OX=168... [more]
A0A2K3MP397.2e-0732.20Ribonuclease H OS=Trifolium pratense OX=57577 GN=L195_g015681 PE=4 SV=1[more]
A0A2N9ESR27.2e-0750.00Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5496 PE=3 SV=1[more]
BLAST of Lag0003219 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 298..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..243
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 281..335
e-value: 9.0E-8
score: 32.0
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 281..335
e-value: 5.67791E-8
score: 48.8496

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0003219.1Lag0003219.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity