Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTCAGTTTGACGAGACTCTCATTCCTTTTGCAGCCTAAGCCAAAGGCGTTGATTGTGTGTGTGCGGAGAAGGAATGGGACTGCGGCTGCTATTCCAGGCAGAGACCGGGTGATTGGGTTTGGAAAGCACAAGGGCAAAATGCTGGGAAGCCTGCCTTCAAGCTATCTGAAATGGGTCTCCAAAAATCTGAGAGCAAGGGAGTTTGAAGAGTGGGGAATTCTGGCAGACCAAGTTCTGGAAGACCCAGTCTACCAAGACCGCATCCAGTGGGAGTTCGCCCAAAACATTCTGAGTGGGAGCATGAGCAACTGCAACACACGGGCAACTGGGGACAACGTCGTTTCTGAGCTGTTGGAGATAAGCGAAAGGTTTGGCTGGGATTGGGATTGGGACAACGCCCACAAAGCCGGCTGGAGAGACGTCAACTTTGAGCTTTTGGGGACCTCGAAAGGTGGAAGAATCCCACGACGAAACAAAGCAACTGCAACTGCAACTGAAACTAACCCGGAATCCAAGATGATGAAGAAGCAAAATCAAAATGTATCACACGGTGGCGGGACAAGGAGGGAGAGAAGAAGAGATCGCCTGAGAGTGAAGCGACAACAATCCCAATCCAAAACTGAAGCCAAAACCACTCCCAATGCTCAAATAGACAATACCAGGATTAGGAATCCCTTTCCTGGCCGTCAAACTCTGCTAAACTCGTTTACCACCACCAGATGA
mRNA sequence
ATGAGTTTCAGTTTGACGAGACTCTCATTCCTTTTGCAGCCTAAGCCAAAGGCGTTGATTGTGTGTGTGCGGAGAAGGAATGGGACTGCGGCTGCTATTCCAGGCAGAGACCGGGTGATTGGGTTTGGAAAGCACAAGGGCAAAATGCTGGGAAGCCTGCCTTCAAGCTATCTGAAATGGGTCTCCAAAAATCTGAGAGCAAGGGAGTTTGAAGAGTGGGGAATTCTGGCAGACCAAGTTCTGGAAGACCCAGTCTACCAAGACCGCATCCAGTGGGAGTTCGCCCAAAACATTCTGAGTGGGAGCATGAGCAACTGCAACACACGGGCAACTGGGGACAACGTCGTTTCTGAGCTGTTGGAGATAAGCGAAAGGTTTGGCTGGGATTGGGATTGGGACAACGCCCACAAAGCCGGCTGGAGAGACGTCAACTTTGAGCTTTTGGGGACCTCGAAAGGTGGAAGAATCCCACGACGAAACAAAGCAACTGCAACTGCAACTGAAACTAACCCGGAATCCAAGATGATGAAGAAGCAAAATCAAAATGTATCACACGGTGGCGGGACAAGGAGGGAGAGAAGAAGAGATCGCCTGAGAGTGAAGCGACAACAATCCCAATCCAAAACTGAAGCCAAAACCACTCCCAATGCTCAAATAGACAATACCAGGATTAGGAATCCCTTTCCTGGCCGTCAAACTCTGCTAAACTCGTTTACCACCACCAGATGA
Coding sequence (CDS)
ATGAGTTTCAGTTTGACGAGACTCTCATTCCTTTTGCAGCCTAAGCCAAAGGCGTTGATTGTGTGTGTGCGGAGAAGGAATGGGACTGCGGCTGCTATTCCAGGCAGAGACCGGGTGATTGGGTTTGGAAAGCACAAGGGCAAAATGCTGGGAAGCCTGCCTTCAAGCTATCTGAAATGGGTCTCCAAAAATCTGAGAGCAAGGGAGTTTGAAGAGTGGGGAATTCTGGCAGACCAAGTTCTGGAAGACCCAGTCTACCAAGACCGCATCCAGTGGGAGTTCGCCCAAAACATTCTGAGTGGGAGCATGAGCAACTGCAACACACGGGCAACTGGGGACAACGTCGTTTCTGAGCTGTTGGAGATAAGCGAAAGGTTTGGCTGGGATTGGGATTGGGACAACGCCCACAAAGCCGGCTGGAGAGACGTCAACTTTGAGCTTTTGGGGACCTCGAAAGGTGGAAGAATCCCACGACGAAACAAAGCAACTGCAACTGCAACTGAAACTAACCCGGAATCCAAGATGATGAAGAAGCAAAATCAAAATGTATCACACGGTGGCGGGACAAGGAGGGAGAGAAGAAGAGATCGCCTGAGAGTGAAGCGACAACAATCCCAATCCAAAACTGAAGCCAAAACCACTCCCAATGCTCAAATAGACAATACCAGGATTAGGAATCCCTTTCCTGGCCGTCAAACTCTGCTAAACTCGTTTACCACCACCAGATGA
Protein sequence
MSFSLTRLSFLLQPKPKALIVCVRRRNGTAAAIPGRDRVIGFGKHKGKMLGSLPSSYLKWVSKNLRAREFEEWGILADQVLEDPVYQDRIQWEFAQNILSGSMSNCNTRATGDNVVSELLEISERFGWDWDWDNAHKAGWRDVNFELLGTSKGGRIPRRNKATATATETNPESKMMKKQNQNVSHGGGTRRERRRDRLRVKRQQSQSKTEAKTTPNAQIDNTRIRNPFPGRQTLLNSFTTTR
Homology
BLAST of Lag0003213 vs. NCBI nr
Match:
XP_022149418.1 (uncharacterized protein LOC111017846 [Momordica charantia])
HSP 1 Score: 277.3 bits (708), Expect = 1.2e-70
Identity = 159/251 (63.35%), Postives = 180/251 (71.71%), Query Frame = 0
Query: 2 SFSLTRLSFLLQPKPKALIVCVRRRNGTAAAIPGRDRVIGFGKHKGKMLGSLPSSYLKWV 61
+F+L +LSF P PK L+ V RRN + + RDRVI FGKHKGKMLG+LPSSYLKWV
Sbjct: 4 TFNLAKLSFQNHPVPKPLLASVWRRNASGSG-SARDRVIDFGKHKGKMLGALPSSYLKWV 63
Query: 62 SKNLRAREFEEWGILADQVLEDPVYQDRIQWEFAQNILSGSMSNCNTRATGDNVVSELLE 121
SKNLRAREFEEW ILADQVLEDPVYQDRIQWEFA N+LSG +N TRATGD VVSELLE
Sbjct: 64 SKNLRAREFEEWAILADQVLEDPVYQDRIQWEFAHNVLSG--TNARTRATGDGVVSELLE 123
Query: 122 ISERFGWDWDWDNAHKAGWRDVNFELLGTSKGGRIPRRNKATATATETNPESKMMKKQNQ 181
ISERFGW WDWD KAGWR+VNFELLGTS GGRIPR N + +E+N MK Q Q
Sbjct: 124 ISERFGWYWDWD---KAGWRNVNFELLGTSNGGRIPRINN---SESESN-----MKMQTQ 183
Query: 182 NVS-HGGGTRRERRRDRLRVKRQQSQS---------KTEAKTTPN---AQIDNTRIRNPF 240
N+ GG RR RRDRLR+KR+ S+S KT+ ++TP A +N I NPF
Sbjct: 184 NIQIQGGSGRRRERRDRLRLKREASKSKSKSKGAMDKTDIRSTPQSLYAPTNNPNITNPF 240
BLAST of Lag0003213 vs. NCBI nr
Match:
XP_038898819.1 (uncharacterized protein LOC120086315 [Benincasa hispida])
HSP 1 Score: 253.1 bits (645), Expect = 2.5e-63
Identity = 138/213 (64.79%), Postives = 160/213 (75.12%), Query Frame = 0
Query: 33 IPGRDRVIGFGKHKGKMLGSLPSSYLKWVSKNLRAREFEEWGILADQVLEDPVYQDRIQW 92
+PGRDRV+GFGKHKGKMLG+LPS+YLKWVSKNLRAREFEEW ILADQVLEDPVYQDRIQW
Sbjct: 47 VPGRDRVMGFGKHKGKMLGTLPSTYLKWVSKNLRAREFEEWAILADQVLEDPVYQDRIQW 106
Query: 93 EFAQNILSGSMSNCNTRATGDNVVSELLEISERFGWDWDWDNAHKAGWRDVNFELLGTSK 152
EFA NIL+G+ R D+VVSELLEIS+RFGWDW+ +K+GWRDV FELLGTSK
Sbjct: 107 EFAHNILTGA-----GRTGRDDVVSELLEISDRFGWDWE----NKSGWRDVEFELLGTSK 166
Query: 153 GGRIPRRNKATATATETNPESKMMKKQNQNVSHGGGTRRERRRDRLRVKRQQS---QSKT 212
GGRIPRR ++T + ESK + GGG RR RR+RLRVKR++S + K+
Sbjct: 167 GGRIPRRIESTQKS-----ESKTTDNVSSCAGGGGGGRRRERRNRLRVKREKSKGAEEKS 226
Query: 213 EAKTTPNAQIDNTRIRNPFPGRQTLLNSFTTTR 243
E KT + R NPFPGRQTLLN FTTT+
Sbjct: 227 EVKT--ETENPTPRFNNPFPGRQTLLNRFTTTK 243
BLAST of Lag0003213 vs. NCBI nr
Match:
XP_022953699.1 (uncharacterized protein LOC111456149 [Cucurbita moschata])
HSP 1 Score: 249.6 bits (636), Expect = 2.8e-62
Identity = 148/245 (60.41%), Postives = 164/245 (66.94%), Query Frame = 0
Query: 17 KALIVCVRRRNG-------TAAAIPGRDRVIGFGKHKGKMLGSLPSSYLKWVSKNLRARE 76
KAL VC R +G + IP RDRVIGFG+HKGKMLG+LPSSYLKW+SKNLRAR+
Sbjct: 8 KALPVCAWRSDGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARD 67
Query: 77 FEEWGILADQVLEDPVYQDRIQWEFAQNILSGSMSNCNTRATG-DNVVSELLEISERFGW 136
EEW ILADQVLEDPVYQDRIQWEFA N+LSG R TG D VVSELLEIS+RFGW
Sbjct: 68 TEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGDGR---RGTGRDGVVSELLEISDRFGW 127
Query: 137 DWDWDNAHKAGWRDVNFELLGTSKGGRIPRRNKATATATETNPESKMMKKQNQNVSHGGG 196
DWD AH GWRDVNFELLGTSKGGRIPRR TA GGG
Sbjct: 128 DWD-GGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGG----------GSGGG 187
Query: 197 TRRERRRDRLRVKRQQS-----QSKTEAKT----TPNAQIDN--TRIRNPFPGRQTLLNS 243
+R RRDRLRVKR++S +S+TE + TP AQ DN T + FPGRQTLLN
Sbjct: 188 GKRSERRDRLRVKREKSKGVVERSETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNR 238
BLAST of Lag0003213 vs. NCBI nr
Match:
KAG7013932.1 (hypothetical protein SDJN02_24101, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 247.7 bits (631), Expect = 1.0e-61
Identity = 147/245 (60.00%), Postives = 160/245 (65.31%), Query Frame = 0
Query: 17 KALIVCVRRRNGT-------AAAIPGRDRVIGFGKHKGKMLGSLPSSYLKWVSKNLRARE 76
KAL VC R +GT IP RDRVIGFG+HKGKMLG+LPSSYLKW+SKNLRAR+
Sbjct: 8 KALPVCAWRSDGTRNRAPPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARD 67
Query: 77 FEEWGILADQVLEDPVYQDRIQWEFAQNILSGSMSNCNTRATG-DNVVSELLEISERFGW 136
EEW ILADQVLEDPVYQDRIQWEFA N+LSG R TG D VVSELLEIS+RFGW
Sbjct: 68 TEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGDGR---RGTGRDGVVSELLEISDRFGW 127
Query: 137 DWDWDNAHKAGWRDVNFELLGTSKGGRIPRRNKATATATETNPESKMMKKQNQNVSHGGG 196
DWD AH GWRDVNFELLGTSKGGRIPRR TA GGG
Sbjct: 128 DWD-GGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGG------GGGSGGGGG 187
Query: 197 TRRERRRDRLRVKRQQSQSKTEAK---------TTPNAQIDN--TRIRNPFPGRQTLLNS 243
RR RR+RLRVKR++S+ E TP AQ DN T + FPGRQTLLN
Sbjct: 188 GRRSERRNRLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNR 242
BLAST of Lag0003213 vs. NCBI nr
Match:
KAG6575392.1 (hypothetical protein SDJN03_26031, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 246.5 bits (628), Expect = 2.3e-61
Identity = 147/245 (60.00%), Postives = 161/245 (65.71%), Query Frame = 0
Query: 17 KALIVCVRRRNGT-------AAAIPGRDRVIGFGKHKGKMLGSLPSSYLKWVSKNLRARE 76
KAL VC R +GT IP RDRVIGFG+HKGKMLG+LPSSYLKW+SKNLRAR+
Sbjct: 8 KALPVCAWRSDGTRNRAPPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARD 67
Query: 77 FEEWGILADQVLEDPVYQDRIQWEFAQNILSGSMSNCNTRATG-DNVVSELLEISERFGW 136
EEW ILADQVLEDPVYQDRIQWEFA+N+LSG R TG D VVSELLEIS+RFGW
Sbjct: 68 TEEWAILADQVLEDPVYQDRIQWEFARNLLSGGDGR---RGTGRDGVVSELLEISDRFGW 127
Query: 137 DWDWDNAHKAGWRDVNFELLGTSKGGRIPRRNKATATATETNPESKMMKKQNQNVSHGGG 196
DWD AH GWRDVNFELLGTSKGGRIPRR TA GGG
Sbjct: 128 DWD-GGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGG----GGGGGSGGGGG 187
Query: 197 TRRERRRDRLRVKRQQSQSKTEAK---------TTPNAQIDN--TRIRNPFPGRQTLLNS 243
RR RR+RLRVKR++S+ E TP AQ DN T + FPGRQTLLN
Sbjct: 188 GRRSERRNRLRVKREKSKGVAERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNR 244
BLAST of Lag0003213 vs. ExPASy TrEMBL
Match:
A0A6J1D6Q9 (uncharacterized protein LOC111017846 OS=Momordica charantia OX=3673 GN=LOC111017846 PE=4 SV=1)
HSP 1 Score: 277.3 bits (708), Expect = 6.0e-71
Identity = 159/251 (63.35%), Postives = 180/251 (71.71%), Query Frame = 0
Query: 2 SFSLTRLSFLLQPKPKALIVCVRRRNGTAAAIPGRDRVIGFGKHKGKMLGSLPSSYLKWV 61
+F+L +LSF P PK L+ V RRN + + RDRVI FGKHKGKMLG+LPSSYLKWV
Sbjct: 4 TFNLAKLSFQNHPVPKPLLASVWRRNASGSG-SARDRVIDFGKHKGKMLGALPSSYLKWV 63
Query: 62 SKNLRAREFEEWGILADQVLEDPVYQDRIQWEFAQNILSGSMSNCNTRATGDNVVSELLE 121
SKNLRAREFEEW ILADQVLEDPVYQDRIQWEFA N+LSG +N TRATGD VVSELLE
Sbjct: 64 SKNLRAREFEEWAILADQVLEDPVYQDRIQWEFAHNVLSG--TNARTRATGDGVVSELLE 123
Query: 122 ISERFGWDWDWDNAHKAGWRDVNFELLGTSKGGRIPRRNKATATATETNPESKMMKKQNQ 181
ISERFGW WDWD KAGWR+VNFELLGTS GGRIPR N + +E+N MK Q Q
Sbjct: 124 ISERFGWYWDWD---KAGWRNVNFELLGTSNGGRIPRINN---SESESN-----MKMQTQ 183
Query: 182 NVS-HGGGTRRERRRDRLRVKRQQSQS---------KTEAKTTPN---AQIDNTRIRNPF 240
N+ GG RR RRDRLR+KR+ S+S KT+ ++TP A +N I NPF
Sbjct: 184 NIQIQGGSGRRRERRDRLRLKREASKSKSKSKGAMDKTDIRSTPQSLYAPTNNPNITNPF 240
BLAST of Lag0003213 vs. ExPASy TrEMBL
Match:
A0A6J1GQE9 (uncharacterized protein LOC111456149 OS=Cucurbita moschata OX=3662 GN=LOC111456149 PE=4 SV=1)
HSP 1 Score: 249.6 bits (636), Expect = 1.3e-62
Identity = 148/245 (60.41%), Postives = 164/245 (66.94%), Query Frame = 0
Query: 17 KALIVCVRRRNG-------TAAAIPGRDRVIGFGKHKGKMLGSLPSSYLKWVSKNLRARE 76
KAL VC R +G + IP RDRVIGFG+HKGKMLG+LPSSYLKW+SKNLRAR+
Sbjct: 8 KALPVCAWRSDGIRNRAAPSPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRARD 67
Query: 77 FEEWGILADQVLEDPVYQDRIQWEFAQNILSGSMSNCNTRATG-DNVVSELLEISERFGW 136
EEW ILADQVLEDPVYQDRIQWEFA N+LSG R TG D VVSELLEIS+RFGW
Sbjct: 68 TEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGDGR---RGTGRDGVVSELLEISDRFGW 127
Query: 137 DWDWDNAHKAGWRDVNFELLGTSKGGRIPRRNKATATATETNPESKMMKKQNQNVSHGGG 196
DWD AH GWRDVNFELLGTSKGGRIPRR TA GGG
Sbjct: 128 DWD-GGAHDGGWRDVNFELLGTSKGGRIPRRGDPTAQKVSPGGGG----------GSGGG 187
Query: 197 TRRERRRDRLRVKRQQS-----QSKTEAKT----TPNAQIDN--TRIRNPFPGRQTLLNS 243
+R RRDRLRVKR++S +S+TE + TP AQ DN T + FPGRQTLLN
Sbjct: 188 GKRSERRDRLRVKREKSKGVVERSETEVENNPLPTPKAQPDNPVTGMNRRFPGRQTLLNR 238
BLAST of Lag0003213 vs. ExPASy TrEMBL
Match:
A0A6J1JVI9 (uncharacterized protein LOC111488702 OS=Cucurbita maxima OX=3661 GN=LOC111488702 PE=4 SV=1)
HSP 1 Score: 242.3 bits (617), Expect = 2.1e-60
Identity = 144/246 (58.54%), Postives = 160/246 (65.04%), Query Frame = 0
Query: 17 KALIVCVRRRNG---------TAAAIPGRDRVIGFGKHKGKMLGSLPSSYLKWVSKNLRA 76
KAL VC R +G T IP RDRVIGFG+HKGKMLG+LPSSYLKW+SKNLRA
Sbjct: 8 KALPVCAWRSDGDGIRNRAPPTPNPIPPRDRVIGFGRHKGKMLGALPSSYLKWISKNLRA 67
Query: 77 REFEEWGILADQVLEDPVYQDRIQWEFAQNILSGSMSNCNTRATGDNVVSELLEISERFG 136
R+ EEW ILADQVLEDPVYQDRIQWEFA N+LSG T D VVSELLEIS+RFG
Sbjct: 68 RDTEEWAILADQVLEDPVYQDRIQWEFAHNLLSGGTGRGGT--ARDGVVSELLEISDRFG 127
Query: 137 WDWDWDNAHKAGWRDVNFELLGTSKGGRIPRRNKATATATETNPESKMMKKQNQNVSHGG 196
WDWD GWRDVNFELLGTSKGGRIPRR + TA +K + GG
Sbjct: 128 WDWD-----GGGWRDVNFELLGTSKGGRIPRRAEPTA------------QKVSPGGGGGG 187
Query: 197 GTRRERRRDRLRVKRQQSQSKTEAK---------TTPNAQIDN--TRIRNPFPGRQTLLN 243
G RR RR+RLRVKR++S+ E TP AQ DN T + FPGRQTLLN
Sbjct: 188 GGRRSERRNRLRVKREKSKGVVERSEMKAENNPLPTPKAQPDNPVTGMNRRFPGRQTLLN 234
BLAST of Lag0003213 vs. ExPASy TrEMBL
Match:
A0A0A0K7H6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447750 PE=4 SV=1)
HSP 1 Score: 241.5 bits (615), Expect = 3.6e-60
Identity = 139/236 (58.90%), Postives = 158/236 (66.95%), Query Frame = 0
Query: 22 CVRRRNGTAAAI----------PGRDRVIGFGKHKGKMLGSLPSSYLKWVSKNLRAREFE 81
CVRRR I PGRDRVIGFGKHKGKMLG+LPS+YLKW+SKNLRAREFE
Sbjct: 36 CVRRRRSQGITIRSEAEGKNPVPGRDRVIGFGKHKGKMLGTLPSTYLKWISKNLRAREFE 95
Query: 82 EWGILADQVLEDPVYQDRIQWEFAQNILSGSMSNCNTRATGDNVVSELLEISERFGWDWD 141
EW ILADQVLEDP+YQDR+QWEFA N+L+G+ R+ DNVVSEL EIS+RFGWDWD
Sbjct: 96 EWAILADQVLEDPIYQDRVQWEFAHNVLTGA-----GRSGRDNVVSELSEISDRFGWDWD 155
Query: 142 WDNAHKAGWRDVNFELLGTSKGGRIPRRNKATATATETNPESKMMKKQNQNVS---HGGG 201
+K+GWR V+FELLGTSKGGRIPRR P K K QNVS GGG
Sbjct: 156 ----NKSGWRGVDFELLGTSKGGRIPRR---------IEPTQKSESKTAQNVSGGGGGGG 215
Query: 202 TRRERRRDRLRVKRQQSQSKTEAKTTPNAQIDN--TRIRNPFPGRQTLLNSFTTTR 243
RR RRDRLR KR++S E K+ +I+N R NPFPGRQ LL T +
Sbjct: 216 GRRRERRDRLREKREKSTGGGE-KSERKTEIENPVPRFNNPFPGRQALLKRVATIK 252
BLAST of Lag0003213 vs. ExPASy TrEMBL
Match:
A0A1S3CGX9 (uncharacterized protein LOC103500617 OS=Cucumis melo OX=3656 GN=LOC103500617 PE=4 SV=1)
HSP 1 Score: 239.2 bits (609), Expect = 1.8e-59
Identity = 134/214 (62.62%), Postives = 154/214 (71.96%), Query Frame = 0
Query: 33 IPGRDRVIGFGKHKGKMLGSLPSSYLKWVSKNLRAREFEEWGILADQVLEDPVYQDRIQW 92
IPGRDRVIGFGKHKGKMLG+LPS+YLKW+SKNLRAREFEEW ILADQVLEDPVYQDR+QW
Sbjct: 43 IPGRDRVIGFGKHKGKMLGTLPSTYLKWISKNLRAREFEEWAILADQVLEDPVYQDRVQW 102
Query: 93 EFAQNILSGSMSNCNTRATGDNVVSELLEISERFGWDWDWDNAHKAGWRDVNFELLGTSK 152
EFA N+L+G+ R+ D+VVSEL EIS+RFGWDWD +K+GWRDV+FELLGTSK
Sbjct: 103 EFAHNVLTGA-----GRSGRDDVVSELSEISDRFGWDWD----NKSGWRDVDFELLGTSK 162
Query: 153 GGRIPRRNKATATATETNPESKMMKKQNQNVS-HGGGTRRERRRDRLRVKRQQSQ---SK 212
GGRIPRR P K +NVS GGG RR RRDRLR KR++S+ K
Sbjct: 163 GGRIPRR---------IEPTQNSEWKTARNVSGGGGGGRRRERRDRLREKREKSKGGGEK 222
Query: 213 TEAKTTPNAQIDNTRIRNPFPGRQTLLNSFTTTR 243
+E KT + R NPFPGRQ LL TT +
Sbjct: 223 SEGKTENENPV--PRFNNPFPGRQALLKRVTTIK 236
BLAST of Lag0003213 vs. TAIR 10
Match:
AT1G51080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 101 Blast hits to 98 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )
HSP 1 Score: 176.0 bits (445), Expect = 3.6e-44
Identity = 105/226 (46.46%), Postives = 133/226 (58.85%), Query Frame = 0
Query: 33 IPGRDRVIGFGKHKGKMLGSLPSSYLKWVSKNLRAREFEEWGILADQVLEDPVYQDRIQW 92
+ RD +I FGKHKGKMLG+LPSSYLKWVSKNLRA FE W LAD+VLED VY+DR +W
Sbjct: 61 LAARDTIIDFGKHKGKMLGTLPSSYLKWVSKNLRAGVFEYWAKLADEVLEDDVYKDRTEW 120
Query: 93 EFAQNILSGS------MSNCNTRATGDNVVSELLEISERFGWDWDWDNAHKAGWRDVNFE 152
EFA+ IL GS +++ N VS LLEISERFG WDN K GW +NFE
Sbjct: 121 EFAEKILHGSDESMRALTSVRKSREEVNSVSMLLEISERFG----WDNEDKIGWSKINFE 180
Query: 153 LLGTSKGGRIPRRNKATATATETNPESKMMK-KQNQNVSHGGGTRRERRRDRLRVKRQQS 212
LLGTSKGGRIPR KA E + + K+ + G RR++RR+R+R +
Sbjct: 181 LLGTSKGGRIPRLRKANEEEEERGEMVRRREIKKKEEEEDENGWRRKQRRERMRQSLGRD 240
Query: 213 QSKTEAKTTPNAQID---------NTRIRNPFPGRQTLLNSFTTTR 243
KT ++ + +I++PFPGR++LL R
Sbjct: 241 DGKTVNRSEQKGVLGKLEDVEKQLEPKIQSPFPGRESLLKKVMNKR 282
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022149418.1 | 1.2e-70 | 63.35 | uncharacterized protein LOC111017846 [Momordica charantia] | [more] |
XP_038898819.1 | 2.5e-63 | 64.79 | uncharacterized protein LOC120086315 [Benincasa hispida] | [more] |
XP_022953699.1 | 2.8e-62 | 60.41 | uncharacterized protein LOC111456149 [Cucurbita moschata] | [more] |
KAG7013932.1 | 1.0e-61 | 60.00 | hypothetical protein SDJN02_24101, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6575392.1 | 2.3e-61 | 60.00 | hypothetical protein SDJN03_26031, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1D6Q9 | 6.0e-71 | 63.35 | uncharacterized protein LOC111017846 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
A0A6J1GQE9 | 1.3e-62 | 60.41 | uncharacterized protein LOC111456149 OS=Cucurbita moschata OX=3662 GN=LOC1114561... | [more] |
A0A6J1JVI9 | 2.1e-60 | 58.54 | uncharacterized protein LOC111488702 OS=Cucurbita maxima OX=3661 GN=LOC111488702... | [more] |
A0A0A0K7H6 | 3.6e-60 | 58.90 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447750 PE=4 SV=1 | [more] |
A0A1S3CGX9 | 1.8e-59 | 62.62 | uncharacterized protein LOC103500617 OS=Cucumis melo OX=3656 GN=LOC103500617 PE=... | [more] |
Match Name | E-value | Identity | Description | |
AT1G51080.1 | 3.6e-44 | 46.46 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |