Lag0003133 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0003133
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	40S ribosomal S3-like protein
Location	chr4: 48354386 .. 48356281 (-)
RNA-Seq Expression	Lag0003133
Synteny	Lag0003133

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACTCAGATGAGCAAAAAGCGAAAGGTTGGTAATGAATTTGCTTCTTCATCTTACATTTTTCACGACACACAAAACATTCTGCACATTTTGATGTTTACGGAACTTGTTTGATTCACTGGGATATAGTTCGTGGTCGATGGAGTGTTCTTCGCCGAGCTTAACGAAGTTCTTATCAGAGAACTCGCAGAGGATGGATACTCCGGAGTTGAGGTTAGGGTTACGCCTATGCGGACTGAAATTATCATTATAGGGCTACTCGTACACAGAATGTTCTTGGTAAGAGTCTTTTCTCTCGTAGTTTTGATTTTTGTTTTCCTGCAAATTATTGGAATAGATTTCGGAAGACGAGTCTGCTTTTATTTCGTATCAAGCTACCACTACGAGTGTGTGTGCGTGTGTGTATATATATATATATATATATTATGATTGCACTTTCCGCATCTAATATTTGAAGCAATAGATGCCACAGAGTTGAAGTGTGTATTAATCTATAATTGGAATCACATATAATTGTCACGACGTGGAATCTCGATTTTTAGGATTTGTAGAATCTTAGACAGGCTTTTGGAATTGTGTTTAAGTGGGAATGCTTTGAGATTTGTGAAGTCCTCGAAAATTGGGTTGGATGGTTGATGTTGAATTTACCATCAGTTAATACGGTGACTGGGGCTGGGGGCTAAGTACAATGTTCAGTCTAATCGTGTTTGTTGATGCTGGATATTTGACATAATTGCAACTATTTGCTTGATTCGGGTATTAGAAAACATCTTGCTTACTCTGTTAATGCATTAGAAAGCATCTTGCTTCCAACGAAGTGAATTTGAAAATTTCAGCTAATAGCAGTTTCCCGTATCATACAAGTTTTGAGATATGTGGTGCATCATATTACTTGTTGAGCAATTTAATTTTGGTGTTGCTTCCATTGCTTTTGGATTTGGTGTCTGACTATGCATTCAATTACGGCTTCAGGCGAGAAAGGTAGGAGAATCAGAGAATTGACATCTGTTGTTCAGAAGCGTTTCAAGTTTCCTGAAAACAGTGTTGAGCTATATGCCGAGAAGGTCAACAACAGAGGACTCTGTGCCATGGTTCGAGCTGAGTCTCTTCGCTACAAGCTTCTTGGAGGCCTTGCTGTGAGGAGGTATGTAACAGAAATTATGGATGTTATGCTAGTATGGTGTGCGTGACTGCGTGTTGTAGTTTCTAGTTTGATTGGAGACTTTCAATCTTAGGTGTTATATTCCATAATGATGAAAACATTCTTAACTGATTGTTTTGTTTGGGATGGGGCTGTTTTCACATGCTCAGCAATTTTTTTGGGCAATTGCTTCTATTAAGTGTTACTTTTTCATCTTTCCAGGGCTTGCTATGGTGTTCTTAGACTTGTCATGGAGAGTGGAGCCAAGGGGTGGGAGGTCACTATTAATTTTAATTGAATGACATTGGTTCCTAATGTCTCTCAGGGCTAACTATCTTGTTCTGAATTATGCAGCAAAATCCATGAAATTCAAGGATGGTTACATGATTTCATCCGGACAGCCAGTGAAAGAGTACATACATAGACTCTGTCGTGAGACACGTTCTCCTTAGACAGGTCAGTATCATTTCAAGAGGCGGGATGCTCGAGCTTCATAGCTCTGCTATTATGCGACATTCATTTTCTTGAATCGCAGATGGGAGTGGTCTTTAATCAATGTCTCTGTTTCTTTAATTTACAGGGTGTTGTCGGTATCAAGGTCAAAATCATGCTTGACTGGGACCCGAAGGGCAAGCAAGGTCCATCGACGCCCCTCCCCGACTTTGGTTACTATTCATACTCCCAAGGAAGAAGAGGAGTTCATTAGGCCCGTGGCAGTGATTTCGGCCGAGATAGAGGTTCCACCAGCTTAA

mRNA sequence

ATGGCAACTCAGATGAGCAAAAAGCGAAAGTTCGTGGTCGATGGAGTGTTCTTCGCCGAGCTTAACGAAGTTCTTATCAGAGAACTCGCAGAGGATGGATACTCCGGAGTTGAGGTTAGGGTTACGCCTATGCGGACTGAAATTATCATTATAGGGCTACTCGTACACAGAATGTTCTTGGCTTTTGGAATTGTGTTTAAGTGGGAATGCTTTGAGATTTGTGAAGTCCTCGAAAATTGGGTTGGATGGTTGATGTTGAATTTACCATCAGTTAATACGCATCTTGCTTCCAACGAAGTGAATTTGAAAATTTCAGCTAATAGCAGTTTCCCGTATCATACAAGCGAGAAAGGTAGGAGAATCAGAGAATTGACATCTGTTGTTCAGAAGCGTTTCAAGTTTCCTGAAAACAGTGTTGAGCTATATGCCGAGAAGGTCAACAACAGAGGACTCTGTGCCATGGTTCGAGCTGAGTCTCTTCGCTACAAGCTTCTTGGAGGCCTTGCTGTGAGGAGGGCTTGCTATGGTGTTCTTAGACTTGTCATGGAGAGTGGAGCCAAGGGGGCTAACTATCTTGTTCTGAATTATGCAGCAAAATCCATGAAATTCAAGGATGGTTACATGATTTCATCCGGACAGCCAGTGAAAGAGGTGTTGTCGGTATCAAGGTCAAAATCATGCTTGACTGGGACCCGAAGGGCAAGCAAGGTCCATCGACGCCCCTCCCCGACTTTGGTTACTATTCATACTCCCAAGGAAGAAGAGGAGTTCATTAGGCCCGTGGCAGTGATTTCGGCCGAGATAGAGGTTCCACCAGCTTAA

Coding sequence (CDS)

ATGGCAACTCAGATGAGCAAAAAGCGAAAGTTCGTGGTCGATGGAGTGTTCTTCGCCGAGCTTAACGAAGTTCTTATCAGAGAACTCGCAGAGGATGGATACTCCGGAGTTGAGGTTAGGGTTACGCCTATGCGGACTGAAATTATCATTATAGGGCTACTCGTACACAGAATGTTCTTGGCTTTTGGAATTGTGTTTAAGTGGGAATGCTTTGAGATTTGTGAAGTCCTCGAAAATTGGGTTGGATGGTTGATGTTGAATTTACCATCAGTTAATACGCATCTTGCTTCCAACGAAGTGAATTTGAAAATTTCAGCTAATAGCAGTTTCCCGTATCATACAAGCGAGAAAGGTAGGAGAATCAGAGAATTGACATCTGTTGTTCAGAAGCGTTTCAAGTTTCCTGAAAACAGTGTTGAGCTATATGCCGAGAAGGTCAACAACAGAGGACTCTGTGCCATGGTTCGAGCTGAGTCTCTTCGCTACAAGCTTCTTGGAGGCCTTGCTGTGAGGAGGGCTTGCTATGGTGTTCTTAGACTTGTCATGGAGAGTGGAGCCAAGGGGGCTAACTATCTTGTTCTGAATTATGCAGCAAAATCCATGAAATTCAAGGATGGTTACATGATTTCATCCGGACAGCCAGTGAAAGAGGTGTTGTCGGTATCAAGGTCAAAATCATGCTTGACTGGGACCCGAAGGGCAAGCAAGGTCCATCGACGCCCCTCCCCGACTTTGGTTACTATTCATACTCCCAAGGAAGAAGAGGAGTTCATTAGGCCCGTGGCAGTGATTTCGGCCGAGATAGAGGTTCCACCAGCTTAA

Protein sequence

MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFLAFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRLVMESGAKGANYLVLNYAAKSMKFKDGYMISSGQPVKEVLSVSRSKSCLTGTRRASKVHRRPSPTLVTIHTPKEEEEFIRPVAVISAEIEVPPA

Homology

[Close]

BLAST of Lag0003133 vs. NCBI nr
Match: XP_020226895.1 (40S ribosomal protein S3-3 [Cajanus cajan] >KYP56576.1 40S ribosomal protein S3-3 [Cajanus cajan])

HSP 1 Score: 265.4 bits (677), Expect = 5.5e-67
Identity = 163/290 (56.21%), Postives = 178/290 (61.38%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFL 60
           MATQMSKKRKFV DGVFFAELNEVL RELAEDGYSGVEVRVTPMRTEIII       +  
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVL- 60

Query: 61  AFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRR 120
                                                                  EKGRR
Sbjct: 61  ------------------------------------------------------GEKGRR 120

Query: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRL 180
           IRELTSVVQKRFKFPENSVELYAEKVNNRGLCA+ +AESLRYKLLGGLAVRRACYGVLR 
Sbjct: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 180

Query: 181 VMESGAKGANYLVLN----YAAKSMKFKDGYMISSGQPVKEVLSVS-------------R 240
           VMESGAKG   +V        AKSMKFKDGYMISSGQPVK+ +  +             +
Sbjct: 181 VMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIK 235

Query: 241 SKSCLTGTRRASKVHRRPSPTLVTIHTPKEEEEFIRPVAVISAEIEVPPA 274
            K  L    +  +  + P P LVTIHTPKEEEE+IRP AV++ +IEVP A
Sbjct: 241 VKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYIRPAAVLANDIEVPVA 235

[Close]

BLAST of Lag0003133 vs. NCBI nr
Match: XP_022149321.1 (40S ribosomal protein S3-3 [Momordica charantia])

HSP 1 Score: 265.4 bits (677), Expect = 5.5e-67
Identity = 170/291 (58.42%), Postives = 181/291 (62.20%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFL 60
           MATQMSKKRKFV DGVFFAELNEVL RELAEDGYSGVEVRVTPMRTEIII          
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIII---------- 60

Query: 61  AFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRR 120
                                              A+   N+             EKGRR
Sbjct: 61  ----------------------------------RATRTQNV-----------LGEKGRR 120

Query: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRL 180
           IRELTSVVQKRFKFPENSVELYAEKVNNRGLCA+ +AESLRYKLLGGLAVRRACYGVLR 
Sbjct: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 180

Query: 181 VMESGAKGANYLVLN----YAAKSMKFKDGYMISSGQPVKEVLSVS-------------R 240
           VMESGAKG   +V        AKSMKFKDGYMISSGQPVKE +  +             +
Sbjct: 181 VMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIK 236

Query: 241 SKSCLTGTRRASKVHRRPSPTLVTIHTPKEEEEFIRPVAVI-SAEIEVPPA 274
            K  L    +  +    P P LVTIHTPKEEEEFIRPVAVI +AEIEV  A
Sbjct: 241 VKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA 236

[Close]

BLAST of Lag0003133 vs. NCBI nr
Match: XP_003589329.2 (40S ribosomal protein S3-3 [Medicago truncatula] >RHN77515.1 putative ribosomal protein S3 [Medicago truncatula])

HSP 1 Score: 264.6 bits (675), Expect = 9.3e-67
Identity = 161/288 (55.90%), Postives = 177/288 (61.46%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFL 60
           MATQMSKKRKFV DGVFFAELNEVL RELAEDGYSGVEVRVTPMRTEIII       +  
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVL- 60

Query: 61  AFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRR 120
                                                                  EKGRR
Sbjct: 61  ------------------------------------------------------GEKGRR 120

Query: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRL 180
           IRELTSVVQKRFKFPENSVELYAEKVNNRGLCA+ +AESLRYKLLGGLAVRRACYGVLR 
Sbjct: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 180

Query: 181 VMESGAKGANYLVLN----YAAKSMKFKDGYMISSGQPVKEVLSVS-------------R 240
           VMESGAKG   +V        AKSMKFKDGYMISSGQPVK+ +  +             +
Sbjct: 181 VMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIK 233

Query: 241 SKSCLTGTRRASKVHRRPSPTLVTIHTPKEEEEFIRPVAVISAEIEVP 272
            K  L    +  +  + P P +VTIHTPKEEEE+IRP AV++ +IEVP
Sbjct: 241 VKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVP 233

[Close]

BLAST of Lag0003133 vs. NCBI nr
Match: XP_040861625.1 (40S ribosomal protein S3-3 isoform X1 [Glycine max])

HSP 1 Score: 264.6 bits (675), Expect = 9.3e-67
Identity = 171/307 (55.70%), Postives = 194/307 (63.19%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGL------- 60
           MATQMSKKRKFV DGVFFAELNEVL RELAEDGYSGVEVRVTPMRTEIII          
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60

Query: 61  ---------LVHRMFLAFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKI 120
                    L+  +F  FGI + W+ F  C     + G+ +L                  
Sbjct: 61  SCARVLFWNLLFFLFYPFGIEY-WK-FLFCFF---FFGYFVL------------------ 120

Query: 121 SANSSFPYHTSEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKL 180
                      EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCA+ +AESLRYKL
Sbjct: 121 ---------IGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL 180

Query: 181 LGGLAVRRACYGVLRLVMESGAKGANYLVLN----YAAKSMKFKDGYMISSGQPVKEVLS 240
           LGGLAVRRACYGVLR VMESGAKG   +V        AKSMKFKDGYMISSGQPVK+ + 
Sbjct: 181 LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYID 240

Query: 241 VS-------------RSKSCLTGTRRASKVHRRPSPTLVTIHTPKEEEEFIRPVAVISA- 274
            +             + K  L    +  +  + P P LVTIH+PKEEEE+I+P  V++A 
Sbjct: 241 SAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHSPKEEEEYIQPAPVLAAN 275

[Close]

BLAST of Lag0003133 vs. NCBI nr
Match: XP_003590123.1 (40S ribosomal protein S3-3 [Medicago truncatula] >ACJ84093.1 unknown [Medicago truncatula] >AES60374.1 40S ribosomal S3-like protein [Medicago truncatula] >AFK47109.1 unknown [Medicago truncatula] >RHN78658.1 putative ribosomal protein S3 [Medicago truncatula])

HSP 1 Score: 264.6 bits (675), Expect = 9.3e-67
Identity = 161/288 (55.90%), Postives = 177/288 (61.46%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFL 60
           MATQMSKKRKFV DGVFFAELNEVL RELAEDGYSGVEVRVTPMRTEIII       +  
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVL- 60

Query: 61  AFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRR 120
                                                                  EKGRR
Sbjct: 61  ------------------------------------------------------GEKGRR 120

Query: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRL 180
           IRELTSVVQKRFKFPENSVELYAEKVNNRGLCA+ +AESLRYKLLGGLAVRRACYGVLR 
Sbjct: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 180

Query: 181 VMESGAKGANYLVLN----YAAKSMKFKDGYMISSGQPVKEVLSVS-------------R 240
           VMESGAKG   +V        AKSMKFKDGYMISSGQPVK+ +  +             +
Sbjct: 181 VMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIK 233

Query: 241 SKSCLTGTRRASKVHRRPSPTLVTIHTPKEEEEFIRPVAVISAEIEVP 272
            K  L    +  +  + P P +VTIHTPKEEEE+IRP AV++ +IEVP
Sbjct: 241 VKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVP 233

[Close]

BLAST of Lag0003133 vs. ExPASy Swiss-Prot
Match: Q9FJA6 (40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.7e-61
Identity = 149/290 (51.38%), Postives = 171/290 (58.97%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFL 60
           MATQ+SKKRKFV DGVF+AELNEVL RELAEDGYSGVEVRVTPMRTEIII          
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIII---------- 60

Query: 61  AFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRR 120
                                              A+   N+             EKGRR
Sbjct: 61  ----------------------------------RATRTQNV-----------LGEKGRR 120

Query: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRL 180
           IRELTS+VQKRFKFP++SVELYAEKV NRGLCA+ +AESLRYKLLGGLAVRRACYGVLR 
Sbjct: 121 IRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 180

Query: 181 VMESGAKGANYLVLN----YAAKSMKFKDGYMISSGQPVKEVLSVS-------------R 240
           VMESGAKG   +V        AKSMKFKDGYM+SSGQP KE +  +             +
Sbjct: 181 VMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGLK 235

Query: 241 SKSCLTGTRRASKVHRRPSPTLVTIHTPKEEEEFIRPVAVISAEIEVPPA 274
            K  L    +  +    P P +V IHTPKE++ +I P  V++    VP A
Sbjct: 241 VKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQAAFVPEA 235

[Close]

BLAST of Lag0003133 vs. ExPASy Swiss-Prot
Match: Q9M339 (40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.5e-59
Identity = 146/280 (52.14%), Postives = 163/280 (58.21%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFL 60
           M TQ+SKKRKFV DGVF+AELNEVL RELAEDGYSGVEVRVTPMRTEIII          
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIII---------- 60

Query: 61  AFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRR 120
                                              A+   N+             EKGRR
Sbjct: 61  ----------------------------------RATRTQNV-----------LGEKGRR 120

Query: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRL 180
           IRELTS+VQKRFKFP +SVELYAEKVNNRGLCA+ +AESLRYKLLGGLAVRRACYGVLR 
Sbjct: 121 IRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 180

Query: 181 VMESGAKGANYLVLN----YAAKSMKFKDGYMISSGQPVKEVLSVS-------------R 240
           VMESGAKG   +V        AKSMKFKDGYM+SSGQP KE +  +             +
Sbjct: 181 VMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGIK 225

Query: 241 SKSCLTGTRRASKVHRRPSPTLVTIHTPKEEEEFIRPVAV 264
            K  L    +     + P P +V IH+PKEEE    P  V
Sbjct: 241 VKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQV 225

[Close]

BLAST of Lag0003133 vs. ExPASy Swiss-Prot
Match: Q9SIP7 (40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.2e-58
Identity = 143/277 (51.62%), Postives = 161/277 (58.12%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFL 60
           MATQ+SKKRKFV DGVF+AELNEVL RELAEDGYSGVEVRVTPMRTEIII          
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIII---------- 60

Query: 61  AFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRR 120
                                              A+   N+             EKGRR
Sbjct: 61  ----------------------------------RATRTQNV-----------LGEKGRR 120

Query: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRL 180
           IRELTS+VQKRFKFP +SVELYAEKVNNRGLCA+ +AESLRYKLLGGLAVRRACYGVLR 
Sbjct: 121 IRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 180

Query: 181 VMESGAKGANYLVLN----YAAKSMKFKDGYMISSGQPVKEVLSVS-------------R 240
           VMESGAKG   +V        AKSMKFKDGYM+SSGQP KE +  +             +
Sbjct: 181 VMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGIK 222

Query: 241 SKSCLTGTRRASKVHRRPSPTLVTIHTPKEEEEFIRP 261
            K  L          + P P +V IH PK++  +  P
Sbjct: 241 VKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAP 222

[Close]

BLAST of Lag0003133 vs. ExPASy Swiss-Prot
Match: P02350 (40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2)

HSP 1 Score: 196.4 bits (498), Expect = 4.1e-49
Identity = 138/289 (47.75%), Postives = 154/289 (53.29%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFL 60
           MA Q+SKKRKFV DG+F AELNE L RELAEDGYSGVEVRVTP RTEIII          
Sbjct: 1   MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIII---------- 60

Query: 61  AFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRR 120
                                             LA+   N+             EKGRR
Sbjct: 61  ----------------------------------LATRTQNV-----------LGEKGRR 120

Query: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRL 180
           IRELT+VVQKRF FPE SVELYAEKV  RGLCA+ +AESLRYKLLGGLAVRRACYGVLR 
Sbjct: 121 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 180

Query: 181 VMESGAKGANYLV----LNYAAKSMKFKDGYMISSGQPVKEVLSVSRSKSCLTGTRRASK 240
           +MESGAKG   +V        AKSMKF DG MI SG PV   +  +     L       K
Sbjct: 181 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 231

Query: 241 VH-------------RRPSPTLVTIHTPKEEEEFIRPVAVISAEIEVPP 273
           V              ++P P  V+I  PK+E   I P   IS +    P
Sbjct: 241 VKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE---IVPTTPISEQKAAKP 231

[Close]

BLAST of Lag0003133 vs. ExPASy Swiss-Prot
Match: Q3T169 (40S ribosomal protein S3 OS=Bos taurus OX=9913 GN=RPS3 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 4.1e-49
Identity = 137/290 (47.24%), Postives = 154/290 (53.10%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFL 60
           MA Q+SKKRKFV DG+F AELNE L RELAEDGYSGVEVRVTP RTEIII          
Sbjct: 1   MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIII---------- 60

Query: 61  AFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRR 120
                                             LA+   N+             EKGRR
Sbjct: 61  ----------------------------------LATRTQNV-----------LGEKGRR 120

Query: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRL 180
           IRELT+VVQKRF FPE SVELYAEKV  RGLCA+ +AESLRYKLLGGLAVRRACYGVLR 
Sbjct: 121 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 180

Query: 181 VMESGAKGANYLV----LNYAAKSMKFKDGYMISSGQPVKEVLSVSRSKSCLTGTRRASK 240
           +MESGAKG   +V        AKSMKF DG MI SG PV   +  +     L       K
Sbjct: 181 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 235

Query: 241 VH-------------RRPSPTLVTIHTPKEEEEFIRPVAVISAEIEVPPA 274
           V              ++P P  V+I  PK+E     P++        PPA
Sbjct: 241 VKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPA 235

[Close]

BLAST of Lag0003133 vs. ExPASy TrEMBL
Match: A0A151SP15 (40S ribosomal protein S3-3 OS=Cajanus cajan OX=3821 GN=KK1_002819 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 2.6e-67
Identity = 163/290 (56.21%), Postives = 178/290 (61.38%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFL 60
           MATQMSKKRKFV DGVFFAELNEVL RELAEDGYSGVEVRVTPMRTEIII       +  
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVL- 60

Query: 61  AFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRR 120
                                                                  EKGRR
Sbjct: 61  ------------------------------------------------------GEKGRR 120

Query: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRL 180
           IRELTSVVQKRFKFPENSVELYAEKVNNRGLCA+ +AESLRYKLLGGLAVRRACYGVLR 
Sbjct: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 180

Query: 181 VMESGAKGANYLVLN----YAAKSMKFKDGYMISSGQPVKEVLSVS-------------R 240
           VMESGAKG   +V        AKSMKFKDGYMISSGQPVK+ +  +             +
Sbjct: 181 VMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIK 235

Query: 241 SKSCLTGTRRASKVHRRPSPTLVTIHTPKEEEEFIRPVAVISAEIEVPPA 274
            K  L    +  +  + P P LVTIHTPKEEEE+IRP AV++ +IEVP A
Sbjct: 241 VKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYIRPAAVLANDIEVPVA 235

[Close]

BLAST of Lag0003133 vs. ExPASy TrEMBL
Match: A0A6J1D813 (40S ribosomal protein S3-3 OS=Momordica charantia OX=3673 GN=LOC111017761 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 2.6e-67
Identity = 170/291 (58.42%), Postives = 181/291 (62.20%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFL 60
           MATQMSKKRKFV DGVFFAELNEVL RELAEDGYSGVEVRVTPMRTEIII          
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIII---------- 60

Query: 61  AFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRR 120
                                              A+   N+             EKGRR
Sbjct: 61  ----------------------------------RATRTQNV-----------LGEKGRR 120

Query: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRL 180
           IRELTSVVQKRFKFPENSVELYAEKVNNRGLCA+ +AESLRYKLLGGLAVRRACYGVLR 
Sbjct: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 180

Query: 181 VMESGAKGANYLVLN----YAAKSMKFKDGYMISSGQPVKEVLSVS-------------R 240
           VMESGAKG   +V        AKSMKFKDGYMISSGQPVKE +  +             +
Sbjct: 181 VMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIK 236

Query: 241 SKSCLTGTRRASKVHRRPSPTLVTIHTPKEEEEFIRPVAVI-SAEIEVPPA 274
            K  L    +  +    P P LVTIHTPKEEEEFIRPVAVI +AEIEV  A
Sbjct: 241 VKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIEVAAA 236

[Close]

BLAST of Lag0003133 vs. ExPASy TrEMBL
Match: B7FH64 (40S ribosomal S3-like protein OS=Medicago truncatula OX=3880 GN=11434469 PE=2 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 4.5e-67
Identity = 161/288 (55.90%), Postives = 177/288 (61.46%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFL 60
           MATQMSKKRKFV DGVFFAELNEVL RELAEDGYSGVEVRVTPMRTEIII       +  
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVL- 60

Query: 61  AFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRR 120
                                                                  EKGRR
Sbjct: 61  ------------------------------------------------------GEKGRR 120

Query: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRL 180
           IRELTSVVQKRFKFPENSVELYAEKVNNRGLCA+ +AESLRYKLLGGLAVRRACYGVLR 
Sbjct: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 180

Query: 181 VMESGAKGANYLVLN----YAAKSMKFKDGYMISSGQPVKEVLSVS-------------R 240
           VMESGAKG   +V        AKSMKFKDGYMISSGQPVK+ +  +             +
Sbjct: 181 VMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIK 233

Query: 241 SKSCLTGTRRASKVHRRPSPTLVTIHTPKEEEEFIRPVAVISAEIEVP 272
            K  L    +  +  + P P +VTIHTPKEEEE+IRP AV++ +IEVP
Sbjct: 241 VKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVP 233

[Close]

BLAST of Lag0003133 vs. ExPASy TrEMBL
Match: A0A396JMK1 (Putative ribosomal protein S3 OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0155631 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 4.5e-67
Identity = 161/288 (55.90%), Postives = 177/288 (61.46%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFL 60
           MATQMSKKRKFV DGVFFAELNEVL RELAEDGYSGVEVRVTPMRTEIII       +  
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVL- 60

Query: 61  AFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRR 120
                                                                  EKGRR
Sbjct: 61  ------------------------------------------------------GEKGRR 120

Query: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRL 180
           IRELTSVVQKRFKFPENSVELYAEKVNNRGLCA+ +AESLRYKLLGGLAVRRACYGVLR 
Sbjct: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 180

Query: 181 VMESGAKGANYLVLN----YAAKSMKFKDGYMISSGQPVKEVLSVS-------------R 240
           VMESGAKG   +V        AKSMKFKDGYMISSGQPVK+ +  +             +
Sbjct: 181 VMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIK 233

Query: 241 SKSCLTGTRRASKVHRRPSPTLVTIHTPKEEEEFIRPVAVISAEIEVP 272
            K  L    +  +  + P P +VTIHTPKEEEE+IRP AV++ +IEVP
Sbjct: 241 VKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVP 233

[Close]

BLAST of Lag0003133 vs. ExPASy TrEMBL
Match: A0A445GL33 (40S ribosomal protein S3-3 OS=Glycine soja OX=3848 GN=D0Y65_044298 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 5.9e-67
Identity = 162/290 (55.86%), Postives = 177/290 (61.03%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFL 60
           MATQMSKKRKFV DGVFFAELNEVL RELAEDGYSGVEVRVTPMRTEIII       +  
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVL- 60

Query: 61  AFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRR 120
                                                                  EKGRR
Sbjct: 61  ------------------------------------------------------GEKGRR 120

Query: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRL 180
           IRELTSVVQKRFKFPENSVELYAEKVNNRGLCA+ +AESLRYKLLGGLAVRRACYGVLR 
Sbjct: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 180

Query: 181 VMESGAKGANYLVLN----YAAKSMKFKDGYMISSGQPVKEVLSVS-------------R 240
           VMESGAKG   +V        AKSMKFKDGYMISSGQPVK+ +  +             +
Sbjct: 181 VMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIK 235

Query: 241 SKSCLTGTRRASKVHRRPSPTLVTIHTPKEEEEFIRPVAVISAEIEVPPA 274
            K  L    +  +  + P P LVTIHTPKEEEE+ RP AV++ +IEVP A
Sbjct: 241 VKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARPAAVLATDIEVPVA 235

[Close]

BLAST of Lag0003133 vs. TAIR 10
Match: AT5G35530.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 236.9 bits (603), Expect = 1.9e-62
Identity = 149/290 (51.38%), Postives = 171/290 (58.97%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFL 60
           MATQ+SKKRKFV DGVF+AELNEVL RELAEDGYSGVEVRVTPMRTEIII          
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIII---------- 60

Query: 61  AFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRR 120
                                              A+   N+             EKGRR
Sbjct: 61  ----------------------------------RATRTQNV-----------LGEKGRR 120

Query: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRL 180
           IRELTS+VQKRFKFP++SVELYAEKV NRGLCA+ +AESLRYKLLGGLAVRRACYGVLR 
Sbjct: 121 IRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 180

Query: 181 VMESGAKGANYLVLN----YAAKSMKFKDGYMISSGQPVKEVLSVS-------------R 240
           VMESGAKG   +V        AKSMKFKDGYM+SSGQP KE +  +             +
Sbjct: 181 VMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGLK 235

Query: 241 SKSCLTGTRRASKVHRRPSPTLVTIHTPKEEEEFIRPVAVISAEIEVPPA 274
            K  L    +  +    P P +V IHTPKE++ +I P  V++    VP A
Sbjct: 241 VKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQAAFVPEA 235

[Close]

BLAST of Lag0003133 vs. TAIR 10
Match: AT3G53870.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 231.1 bits (588), Expect = 1.1e-60
Identity = 146/280 (52.14%), Postives = 163/280 (58.21%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFL 60
           M TQ+SKKRKFV DGVF+AELNEVL RELAEDGYSGVEVRVTPMRTEIII          
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIII---------- 60

Query: 61  AFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRR 120
                                              A+   N+             EKGRR
Sbjct: 61  ----------------------------------RATRTQNV-----------LGEKGRR 120

Query: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRL 180
           IRELTS+VQKRFKFP +SVELYAEKVNNRGLCA+ +AESLRYKLLGGLAVRRACYGVLR 
Sbjct: 121 IRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 180

Query: 181 VMESGAKGANYLVLN----YAAKSMKFKDGYMISSGQPVKEVLSVS-------------R 240
           VMESGAKG   +V        AKSMKFKDGYM+SSGQP KE +  +             +
Sbjct: 181 VMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGIK 225

Query: 241 SKSCLTGTRRASKVHRRPSPTLVTIHTPKEEEEFIRPVAV 264
            K  L    +     + P P +V IH+PKEEE    P  V
Sbjct: 241 VKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQV 225

[Close]

BLAST of Lag0003133 vs. TAIR 10
Match: AT2G31610.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 227.3 bits (578), Expect = 1.5e-59
Identity = 143/277 (51.62%), Postives = 161/277 (58.12%), Query Frame = 0


Query: 1   MATQMSKKRKFVVDGVFFAELNEVLIRELAEDGYSGVEVRVTPMRTEIIIIGLLVHRMFL 60
           MATQ+SKKRKFV DGVF+AELNEVL RELAEDGYSGVEVRVTPMRTEIII          
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIII---------- 60

Query: 61  AFGIVFKWECFEICEVLENWVGWLMLNLPSVNTHLASNEVNLKISANSSFPYHTSEKGRR 120
                                              A+   N+             EKGRR
Sbjct: 61  ----------------------------------RATRTQNV-----------LGEKGRR 120

Query: 121 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAMVRAESLRYKLLGGLAVRRACYGVLRL 180
           IRELTS+VQKRFKFP +SVELYAEKVNNRGLCA+ +AESLRYKLLGGLAVRRACYGVLR 
Sbjct: 121 IRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 180

Query: 181 VMESGAKGANYLVLN----YAAKSMKFKDGYMISSGQPVKEVLSVS-------------R 240
           VMESGAKG   +V        AKSMKFKDGYM+SSGQP KE +  +             +
Sbjct: 181 VMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGIK 222

Query: 241 SKSCLTGTRRASKVHRRPSPTLVTIHTPKEEEEFIRP 261
            K  L          + P P +V IH PK++  +  P
Sbjct: 241 VKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAP 222

The following BLAST results are available for this feature:

BLAST of Lag0003133 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_020226895.1	5.5e-67	56.21	40S ribosomal protein S3-3 [Cajanus cajan] >KYP56576.1 40S ribosomal protein S3-...	[more]
XP_022149321.1	5.5e-67	58.42	40S ribosomal protein S3-3 [Momordica charantia]	[more]
XP_003589329.2	9.3e-67	55.90	40S ribosomal protein S3-3 [Medicago truncatula] >RHN77515.1 putative ribosomal ...	[more]
XP_040861625.1	9.3e-67	55.70	40S ribosomal protein S3-3 isoform X1 [Glycine max]	[more]
XP_003590123.1	9.3e-67	55.90	40S ribosomal protein S3-3 [Medicago truncatula] >ACJ84093.1 unknown [Medicago t...	[more]

BLAST of Lag0003133 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJA6	2.7e-61	51.38	40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1	[more]
Q9M339	1.5e-59	52.14	40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1	[more]
Q9SIP7	2.2e-58	51.62	40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1	[more]
P02350	4.1e-49	47.75	40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2	[more]
Q3T169	4.1e-49	47.24	40S ribosomal protein S3 OS=Bos taurus OX=9913 GN=RPS3 PE=2 SV=1	[more]

BLAST of Lag0003133 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A151SP15	2.6e-67	56.21	40S ribosomal protein S3-3 OS=Cajanus cajan OX=3821 GN=KK1_002819 PE=3 SV=1	[more]
A0A6J1D813	2.6e-67	58.42	40S ribosomal protein S3-3 OS=Momordica charantia OX=3673 GN=LOC111017761 PE=3 S...	[more]
B7FH64	4.5e-67	55.90	40S ribosomal S3-like protein OS=Medicago truncatula OX=3880 GN=11434469 PE=2 SV...	[more]
A0A396JMK1	4.5e-67	55.90	Putative ribosomal protein S3 OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g01...	[more]
A0A445GL33	5.9e-67	55.86	40S ribosomal protein S3-3 OS=Glycine soja OX=3848 GN=D0Y65_044298 PE=3 SV=1	[more]

BLAST of Lag0003133 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35530.1	1.9e-62	51.38	Ribosomal protein S3 family protein	[more]
AT3G53870.1	1.1e-60	52.14	Ribosomal protein S3 family protein	[more]
AT2G31610.1	1.5e-59	51.62	Ribosomal protein S3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	3.30.1140.32		coord: 148..269 e-value: 3.7E-22 score: 80.8
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	SUPERFAMILY	54821	Ribosomal protein S3 C-terminal domain	coord: 148..216
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 1..53 e-value: 8.0E-21 score: 75.8
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 108..147 e-value: 1.6E-11 score: 46.0
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 2..51
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 115..271
None	No IPR available	PANTHER	PTHR11760:SF51	RIBOSOMAL PROTEIN S3, PUTATIVE-RELATED	coord: 2..51 coord: 115..271
None	No IPR available	CDD	cd02413	40S_S3_KH	coord: 15..150 e-value: 7.61184E-32 score: 110.775
IPR009019	K homology domain superfamily, prokaryotic type	SUPERFAMILY	54814	Prokaryotic type KH domain (KH-domain type II)	coord: 114..154
IPR009019	K homology domain superfamily, prokaryotic type	SUPERFAMILY	54814	Prokaryotic type KH domain (KH-domain type II)	coord: 10..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0003133.1	Lag0003133.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding