Lag0003122 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGATGTGGGGCAAGCAAGAGTCTCGACGGCACGGCGGAAGAAGGTCGTCGGCACGGCGGATGTGGGTCGCCGGCGCGATGCGAGAGGTAGGGATTGGGATACACTCTGTGTTGGGGGGTGGAAAATGGTGGGAAATGGAGGATTAAGTCTTTCAAGGGGGGGCAATGGTGGGAAGGGAGGGTTGTGGAAGATGAAGATGGACGAACGGGCTGGTGCATGAAGGCGGTTCTGGTGGGAGGGTGGGCGGTGTTATGACAACTCATAATTGCAGCAGCTAAGGTATCATAATTACTGTGTTCTTATTTGTTTTTAAAAATTTTCAGGTATTCTTAGTTGCAGGTAGTAAATCTTCCTATTGACAGGACTGTTGTTTCCGATTAATGGAGTTCGAAGGTGTTTCTCTCTACTGAAGGGGGTTGAACTTTGACAAGAAAAATGGCTATAAATAAATAAAGGAGTAAATACCTTTATTGGGGAAGGAGTACAAAGTTCAAGGTTCTTAGGTGCAGGTAGTAAATATGCAGATGGACAGGGATGTTGTTCCTGATCAATGGAGTTCAGAGGTGTTTCTCTCTACTGACGGGGTGGTTGAACTTTGTACTCATTGTCCGACAAGGTATTTACTCCTATTCCCGGGGAACAACTAGGGTCTTTGTACTCATTGGTGTGTCATAATTCCGGTTTCTTAATTTTTCAGCAGATGTGTCATAATTCCGGTTTCTTAATTTTTCAGAGGTTCTCAATGGAGTTCAGAGGTGTTTCTCTCTACTGACGGGGTGGTTGAACTTTGTACTCATTGTCCGACAAGGTATTTACTCCTATTCCCGGGGAACAACTAGGGTCTGGTACATTTGGGTTTCAAAATAGTTGTGTGTCTTTTTTATTTTCGTATTCTTAAACGTCCTAAAATGTCTCCAACTATTTTTAGGGGTGTTTTTTTATCTCTCTTAAATGATTTTGGTTTTAAACGTTAACAACACGTTAGGAAGTTTGTTGAGGGGCATTTTTGTCTTGTATAATTAGGGAATTATTAATTAATAAATGGTTTAGCCATCTATTTAATTTACAAACGTTTGTAGCCATTTTTCAAGCCACCTTTTTATTTGTAGCCATTTTTCTTGTTGCCCCAATATATTTTCATTAAAAATAGGATAAAATAGAATATTATTATTTTGGTAATAAAATAGGGTCATGGAAGAAAGATAAACAGAGATCTCAATAATCCGACTTTGCCCTTCAAGAAATTCAAATTTATCGTTCACGATCTAATTACAATATATATTCATCTTCGCAAATTGATTCTGTTTGTCTCTCTCTCCCTCTCTTTCTCTCTCTAGGTAATCTGTAGTTTTCTTTTTCCTTTTTTGACTCAATTTCGTCTCGAGAAGGTACAGAGCCACAAGGACGAGCACGAAGAAACGGCAATGGATGGAGTTGGCGCAGTGCACAATCGCTCAGTCGAAGATGTTTTCAGTGATTTTAGAGGCCGAAGAAATGGCGTCATCAAAGCCCTCACCGTAGGTATTCGTCTTTCCTTTTCTTGTTGACTCGTTGTAGGAGAAGGATAAAGCTAGGCGTGATGGAAATTCGTTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGTTTTCATTGCTTTAGTATTTATCTTACGTCCTTCACCTTGCGTTTCGGAATGGATTATTTTTGTTTTCGTTGTTTTTTTTGGTTGATTTTGGCGTTCTTGTTCGTGATGTTGCCGTTTGGTTTTTGAGAGAAAACGGAAGTGCTTTGTGAAAAAGGAGTAATGAGGATAAAAGAAAATGTGTTCTCTCTCATACTACTCTTGCCTTTCATGACTGTGGCTGTGCAATGTTGAATCTCAGTCTAGTTTTCGACTGTATAAGCGTTGAATTGTATTGTGAATCTCGTTCTTGAATGTGGATCAATTTTTTTGGTCGATTTGTGTACATGCATGGCCGTTTACATACGGTAAGAAATAAGAGAGCGACGGAGTATTGGTATTGCAGCCAGAGAGCTCTCTTCCTTTGCCTGCATTTTTGAAGTTGTTGCAACTAATCTCTTGTGTACATGTATGTCATATTTTGTGTGAGTTGATGCAAAACCTAAAAGTTTATGTTCCTATACAGTTTGTTAACGATTTTGATTTCAATTGGCGGATTTTGTGTTGGATGTTTTAGTAGATAAATGTAAACTGTAAAACTTATCCTGTTCAGGCAGTGGAGTGGTTTTTTCTATTTCTTTTTCTTTTCGTTTTGTTTTTATGTTGTCTGCTTTTCGTGTCTTGCTGATTTTCTTATTCAAGAAACGGAATGGTTGGTATGTACTTTGATTGAGAGTGCTTGGTTGTTTGGACCTTGGCTTTTGGTTTCATTTGGGAGCTGTGAATTTCTAATTCTTCTCAGTTTTATCATTGCAGATGTCGAAGAGTTCTTTCAACAATGTGATCCTGGTACATGCCTTTAGTAATCTCTGTTTGCTTCTCCTTAACTTTTAAGCCATGAATTTGTTGTGTACGAAGTTCAATTGTCTCTTCATGTTATCTGGAATTCAAACTGATGTCCCCACCCTCATCCGTTTAAAATTATGTGCATGCAATTGTCCTTTTTTTTTTTTGTCTCTTGTTCTTCGTCTACCATTAGAAGTTTTAGATTTTTACATTCTTAGTATTTTGTATTAGAACTCCCTCCTTAGCTATATTTGAAATGGTTATTTGGTGCTTACAGAGAAGGAAAATCTATGCTTGTATGGCTTTCCAAATGAAGTATGGGAAGTTAATTTACCTGCTGAAGAAGTACCTCCAGAACTACCAGAGCCAGCATTGGGTATTAATTTTGCAAGAGATGGCATGCAAGAAAGGGATTGGTTGGCTCTGGTTGCTGTCCATAGCGATTCTTGGCTGCTCTCTGTTGCCTTCTATTTTGGTGCGAGATTTGGATTTGATAAATCTGACAGGTATTTTCATTTTAAATTTAGTTCATATATGAGTTAATTCAACAACCGTGGTTTTGCTAACCTTATATTTTCATGCAGGAGGCGGCTTTTTAATATGATAAATGAATTGCCAACTGTATTTGAAGTAGTCACAGGTATTGCAAAGAAACAAGTCAAGGAAAAGTCATCAAGTGCTAATGGTAGCAGAACCAAGTCAAACTTTAAATCAGTAAGTGGATAGGTCTTCTTCTTCTTTTCAGTTGGTAGATTGATTTTATTTGTGTTACTCCATTGCTGAATATAATTTGTCTTGATTTCATATTTGTATCAAATGGTGTAGAGACATATAGAAAAATAATGGAGCTGGGACAGTGATATTATGTGGCTTATAGAACTGTGTGGTGCTTAATTACGATAATGTTTATAGCTATGGTGGACAGTCTATAATTTTTCATGCCTGTACCTGTGGCTCAGTTATTTCCCATCCACCTACTCAAGAATGAAATTGAGCATGGATAAGAGATGCCCCATGGCGAACTTATTGGTGCTGCTTGTTGGAGTCATATAATCTAAGCATTGATTACTCGGTTTTTTACTTCATTCAATCTTTCGACTATTTTCAGCGGGAAGCTGAAATTCAAGGAATGTATGCAAGGCAGCCGCAGGCAAGGGACGAGAGGGAGGCCTTGTATGAAGAAGACGAAGACGAGCACGGTGACACCTTGTGTGGGGCATGTGGTGAGAATTACGCATCAGATGAATTTTGGATTTGCTGTGATATCTGTGAGAAGTGGTTCCATGGAAAATGCGTTAGAATAACCCCTGCCAAAGCAGAGCACATCAAGCAGTACAAATGCCCATCCTGCAGCAACAAGAGAGGTCGCATTTAA ATGGAGGATGTGGGGCAAGCAAGAGTCTCGACGGCACGGCGGAAGAAGGTCGTCGGCACGGCGGATGTGGGTCGCCGGCGCGATGCGAGAGGTAGGGATTGGGATACACTCTGTGTTGGGGGGTGGAAAATGGTGGGAAATGGAGGATTAAGTCTTTCAAGGGGGGGCAATGGTGGGAAGGGAGGGTTGTGGAAGATGAAGATGGACGAACGGGCTGGTATTCTTAGTTGCAGATGGACAGGGATGTTGTTCCTGATCAATGGAGTTCAGAGGTGTTTCTCTCTACTGACGGGGTGGTTGAACTTTGTACTCATTGTCCGACAAGAGGTTCTCAATGGAGTTCAGAGGTGTTTCTCTCTACTGACGGGGTGGTTGAACTTTGTACTCATTGTCCGACAAGGTATTTACTCCTATTCCCGGGGAACAACTAGGGTACAGAGCCACAAGGACGAGCACGAAGAAACGGCAATGGATGGAGTTGGCGCAGTGCACAATCGCTCAGTCGAAGATGTTTTCAGTGATTTTAGAGGCCGAAGAAATGGCGTCATCAAAGCCCTCACCGTAGATGTCGAAGAGTTCTTTCAACAATGTGATCCTGAGAAGGAAAATCTATGCTTGTATGGCTTTCCAAATGAAGTATGGGAAGTTAATTTACCTGCTGAAGAAGTACCTCCAGAACTACCAGAGCCAGCATTGGGTATTAATTTTGCAAGAGATGGCATGCAAGAAAGGGATTGGTTGGCTCTGGTTGCTGTCCATAGCGATTCTTGGCTGCTCTCTGTTGCCTTCTATTTTGGTGCGAGATTTGGATTTGATAAATCTGACAGGAGGCGGCTTTTTAATATGATAAATGAATTGCCAACTGTATTTGAAGTAGTCACAGGTATTGCAAAGAAACAAGTCAAGGAAAAGTCATCAAGTGCTAATGGTAGCAGAACCAAGTCAAACTTTAAATCACGGGAAGCTGAAATTCAAGGAATGTATGCAAGGCAGCCGCAGGCAAGGGACGAGAGGGAGGCCTTGTATGAAGAAGACGAAGACGAGCACGGTGACACCTTGTGTGGGGCATGTGGTGAGAATTACGCATCAGATGAATTTTGGATTTGCTGTGATATCTGTGAGAAGTGGTTCCATGGAAAATGCGTTAGAATAACCCCTGCCAAAGCAGAGCACATCAAGCAGTACAAATGCCCATCCTGCAGCAACAAGAGAGGTCGCATTTAA ATGGAGGATGTGGGGCAAGCAAGAGTCTCGACGGCACGGCGGAAGAAGGTCGTCGGCACGGCGGATGTGGGTCGCCGGCGCGATGCGAGAGGTAGGGATTGGGATACACTCTGTGTTGGGGGGTGGAAAATGGTGGGAAATGGAGGATTAAGTCTTTCAAGGGGGGGCAATGGTGGGAAGGGAGGGTTGTGGAAGATGAAGATGGACGAACGGGCTGGTATTCTTAGTTGCAGATGGACAGGGATGTTGTTCCTGATCAATGGAGTTCAGAGGTGTTTCTCTCTACTGACGGGGTGGTTGAACTTTGTACTCATTGTCCGACAAGAGGTTCTCAATGGAGTTCAGAGGTGTTTCTCTCTACTGACGGGGTGGTTGAACTTTGTACTCATTGTCCGACAAGGTATTTACTCCTATTCCCGGGGAACAACTAGGGTACAGAGCCACAAGGACGAGCACGAAGAAACGGCAATGGATGGAGTTGGCGCAGTGCACAATCGCTCAGTCGAAGATGTTTTCAGTGATTTTAGAGGCCGAAGAAATGGCGTCATCAAAGCCCTCACCGTAGATGTCGAAGAGTTCTTTCAACAATGTGATCCTGAGAAGGAAAATCTATGCTTGTATGGCTTTCCAAATGAAGTATGGGAAGTTAATTTACCTGCTGAAGAAGTACCTCCAGAACTACCAGAGCCAGCATTGGGTATTAATTTTGCAAGAGATGGCATGCAAGAAAGGGATTGGTTGGCTCTGGTTGCTGTCCATAGCGATTCTTGGCTGCTCTCTGTTGCCTTCTATTTTGGTGCGAGATTTGGATTTGATAAATCTGACAGGAGGCGGCTTTTTAATATGATAAATGAATTGCCAACTGTATTTGAAGTAGTCACAGGTATTGCAAAGAAACAAGTCAAGGAAAAGTCATCAAGTGCTAATGGTAGCAGAACCAAGTCAAACTTTAAATCACGGGAAGCTGAAATTCAAGGAATGTATGCAAGGCAGCCGCAGGCAAGGGACGAGAGGGAGGCCTTGTATGAAGAAGACGAAGACGAGCACGGTGACACCTTGTGTGGGGCATGTGGTGAGAATTACGCATCAGATGAATTTTGGATTTGCTGTGATATCTGTGAGAAGTGGTTCCATGGAAAATGCGTTAGAATAACCCCTGCCAAAGCAGAGCACATCAAGCAGTACAAATGCCCATCCTGCAGCAACAAGAGAGGTCGCATTTAA MEDVGQARVSTARRKKVVGTADVGRRRDARGRDWDTLCVGGWKMVGNGGLSLSRGGNGGKGGLWKMKMDERAGILSCRWTGMLFLINGVQRCFSLLTGWLNFVLIVRQEVLNGVQRCFSLLTGWLNFVLIVRQGIYSYSRGTTRVQSHKDEHEETAMDGVGAVHNRSVEDVFSDFRGRRNGVIKALTVDVEEFFQQCDPEKENLCLYGFPNEVWEVNLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAFYFGARFGFDKSDRRRLFNMINELPTVFEVVTGIAKKQVKEKSSSANGSRTKSNFKSREAEIQGMYARQPQARDEREALYEEDEDEHGDTLCGACGENYASDEFWICCDICEKWFHGKCVRITPAKAEHIKQYKCPSCSNKRGRI Homology
BLAST of Lag0003122 vs. NCBI nr
Match: XP_023000582.1 (PHD finger protein ALFIN-LIKE 3-like [Cucurbita maxima]) HSP 1 Score: 500.4 bits (1287), Expect = 1.5e-137 Identity = 235/252 (93.25%), Postives = 248/252 (98.41%), Query Frame = 0
BLAST of Lag0003122 vs. NCBI nr
Match: XP_004141692.1 (PHD finger protein ALFIN-LIKE 3 [Cucumis sativus] >KGN45504.1 hypothetical protein Csa_016627 [Cucumis sativus]) HSP 1 Score: 500.0 bits (1286), Expect = 2.0e-137 Identity = 237/251 (94.42%), Postives = 246/251 (98.01%), Query Frame = 0
BLAST of Lag0003122 vs. NCBI nr
Match: XP_008462331.1 (PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo] >KAA0059412.1 PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo var. makuwa] >TYK03915.1 PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 499.2 bits (1284), Expect = 3.4e-137 Identity = 237/251 (94.42%), Postives = 245/251 (97.61%), Query Frame = 0
BLAST of Lag0003122 vs. NCBI nr
Match: XP_022964198.1 (PHD finger protein ALFIN-LIKE 3-like [Cucurbita moschata]) HSP 1 Score: 498.8 bits (1283), Expect = 4.4e-137 Identity = 234/251 (93.23%), Postives = 247/251 (98.41%), Query Frame = 0
BLAST of Lag0003122 vs. NCBI nr
Match: KAG6593538.1 (PHD finger protein ALFIN-LIKE 5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 498.0 bits (1281), Expect = 7.5e-137 Identity = 233/251 (92.83%), Postives = 247/251 (98.41%), Query Frame = 0
BLAST of Lag0003122 vs. ExPASy Swiss-Prot
Match: Q5XEM9 (PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 1.3e-107 Identity = 185/251 (73.71%), Postives = 218/251 (86.85%), Query Frame = 0
BLAST of Lag0003122 vs. ExPASy Swiss-Prot
Match: O81488 (PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2) HSP 1 Score: 383.6 bits (984), Expect = 2.7e-105 Identity = 178/254 (70.08%), Postives = 210/254 (82.68%), Query Frame = 0
BLAST of Lag0003122 vs. ExPASy Swiss-Prot
Match: Q9M2B4 (PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 1.3e-104 Identity = 171/251 (68.13%), Postives = 217/251 (86.45%), Query Frame = 0
BLAST of Lag0003122 vs. ExPASy Swiss-Prot
Match: B8BJV8 (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35671 PE=3 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 4.0e-101 Identity = 177/253 (69.96%), Postives = 204/253 (80.63%), Query Frame = 0
BLAST of Lag0003122 vs. ExPASy Swiss-Prot
Match: Q2R837 (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0244800 PE=2 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 4.0e-101 Identity = 177/253 (69.96%), Postives = 204/253 (80.63%), Query Frame = 0
BLAST of Lag0003122 vs. ExPASy TrEMBL
Match: A0A6J1KE15 (PHD finger protein ALFIN-LIKE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111494824 PE=3 SV=1) HSP 1 Score: 500.4 bits (1287), Expect = 7.3e-138 Identity = 235/252 (93.25%), Postives = 248/252 (98.41%), Query Frame = 0
BLAST of Lag0003122 vs. ExPASy TrEMBL
Match: A0A0A0K9L1 (PHD-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G450620 PE=3 SV=1) HSP 1 Score: 500.0 bits (1286), Expect = 9.5e-138 Identity = 237/251 (94.42%), Postives = 246/251 (98.01%), Query Frame = 0
BLAST of Lag0003122 vs. ExPASy TrEMBL
Match: A0A5D3BXQ0 (PHD finger protein ALFIN-LIKE 3-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001120 PE=3 SV=1) HSP 1 Score: 499.2 bits (1284), Expect = 1.6e-137 Identity = 237/251 (94.42%), Postives = 245/251 (97.61%), Query Frame = 0
BLAST of Lag0003122 vs. ExPASy TrEMBL
Match: A0A1S3CGR0 (PHD finger protein ALFIN-LIKE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500707 PE=3 SV=1) HSP 1 Score: 499.2 bits (1284), Expect = 1.6e-137 Identity = 237/251 (94.42%), Postives = 245/251 (97.61%), Query Frame = 0
BLAST of Lag0003122 vs. ExPASy TrEMBL
Match: A0A6J1HK44 (PHD finger protein ALFIN-LIKE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111464289 PE=3 SV=1) HSP 1 Score: 498.8 bits (1283), Expect = 2.1e-137 Identity = 234/251 (93.23%), Postives = 247/251 (98.41%), Query Frame = 0
BLAST of Lag0003122 vs. TAIR 10
Match: AT5G20510.1 (alfin-like 5 ) HSP 1 Score: 391.3 bits (1004), Expect = 9.2e-109 Identity = 185/251 (73.71%), Postives = 218/251 (86.85%), Query Frame = 0
BLAST of Lag0003122 vs. TAIR 10
Match: AT5G26210.1 (alfin-like 4 ) HSP 1 Score: 383.6 bits (984), Expect = 1.9e-106 Identity = 178/254 (70.08%), Postives = 210/254 (82.68%), Query Frame = 0
BLAST of Lag0003122 vs. TAIR 10
Match: AT3G42790.1 (alfin-like 3 ) HSP 1 Score: 381.3 bits (978), Expect = 9.5e-106 Identity = 171/251 (68.13%), Postives = 217/251 (86.45%), Query Frame = 0
BLAST of Lag0003122 vs. TAIR 10
Match: AT2G02470.1 (alfin-like 6 ) HSP 1 Score: 358.6 bits (919), Expect = 6.6e-99 Identity = 175/256 (68.36%), Postives = 207/256 (80.86%), Query Frame = 0
BLAST of Lag0003122 vs. TAIR 10
Match: AT1G14510.1 (alfin-like 7 ) HSP 1 Score: 356.3 bits (913), Expect = 3.3e-98 Identity = 170/250 (68.00%), Postives = 206/250 (82.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|