Lag0003111 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0003111
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	RNA-binding (RRM/RBD/RNP motifs) family protein
Location	chr4: 48156144 .. 48158272 (-)
RNA-Seq Expression	Lag0003111
Synteny	Lag0003111

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAGAAAGGAATTCCAATGCTGACTTCAATGCTTACAATGGCGATGGTTTTCTCCAAATGTACGATCACCAGCAGCAGTTTGATTTGGGGAGTGAATTGGAACGAGGCAATGTTGATAGTACAGGAAGTGAGATGAAGCATTCGACGAGTCATTTTGATTCTTCTTCCACTGGGTTAGTTTTTATGGTTCTTTTGTCGTTGTGTTTTGAAGAGGAACAGGGCAGTTTCATTTGGTTCTTCTGTAATTATATGCGTTATTTTTTTAGAATTGGTTTTGAATCGAACTAGTTGAAGCATCACATTTGGCTGTTTCTTATTTGGTAGCAAACTTTTCGTTGGAGGCGTTTCTTGGGAGACCACTGAAGGTAAATATAAATTTAGTAAGCTATTGATTACTGGGATGTGGGGTTACCCTAGAAAAAGGGGTTTTTTTTTTGTTTGATTATTAATGCGTTTTGCATTATCGTCTTATGATGGCAGATGGATTCTCTGATATATTATCATTCTTAATCCTTCCTATGATGGTTTAAGTCCTCTCCAACGTCTAGTTAGGCATTGGTCAACTCATTTATCTTTCTAGTGGATTGCTCTTCTGGTTATGGTTCCTTTTATTTTGATTCCACATTTCCTTCATGTGCATCTTTGATTATTTTGCTATGAGTCTCGACAGGTCACAGGTGTCATTTGAAATTCATAACATTTTTTGCTTCCTTATGTATAAATCATTGGATTTATGCTCATTTTTATAGTGCTGTAAATTTGGCCATTTGTCCATAGTTCAATTGGCAAAATACTAGTTAACTTTAAAGAACCCTACTAGGGTTCAATGACCCCCATCTCCTTTGTCTTGTTAGGAAAAGAAAAATTGGTCTTTCTTTTGTCACATTGCCATTGTGCTAATATGTTATTGTTTTCACGTTGGTCATTCTGAATTCACTGTCATCATCCTGTCATACATGTCTTGACAATTTTTTTTTTTTATTAATATTTGTTATTCAGAGACCTTTCGTGATTACTTTAGCAAGTATGGGGTAATAGCAGATTCAGTCATAATGATGGACAAACACACTGGAAGACCACGCGGGTTCGGTTTTGTAACATTCTCTGATCCTACAGTTGCTGACATGGTTCTGAAGAAAGACCATGTTATAGATGGCAGAGCGGTAACATGAATATCAGTTATTTTTGTAATCCTAAAATTGTAATCTGGACTGGATGATGGATAATGGAATATTTTTATATCACTCTCAGGTGGAAGTGAAGAGGACAGTTCCTAGGGCTGATATGAATGATAAATTGGTATCAAGAACAAAGAAAATTTTTGTTGGTGGGATACCACCTGCTTTGACCGAAGGTAATATGGCAGAAGTCAATATTATTATTATTATTTTTCTATTGATTGTTTTTTTTCAGAATTAATATTAAATGAAAGATGCTCTGTTTGAATGTCTCATAACATTGCAGATGAGTTTAAGGATTACTTCTCTTCTTTTGGTAGCATCATTGAACACCAAATCATGATAGATTATAGAACGAAGCGGTCCAGAGGATTTGGATTTATCACTTTTGAGAGTGAAGAAGCAGTTGAAAATATCTTTGCTGGAGACAAAAGACATGAGCTTGGAGGCAAGCAGGTGAGTGGGAAAAGGATTAAAAGCATAAAAATCTATTATTGTTTTGCTTGTATGAAAAATGTGTAAGAGATTGTTAACAGAATTTCTGTACTTCAACATGATTAAATGCAGGTGGAAATCAAGAAGGCTGTACCAAGAAGAGTTGCTTGTGATTTCAGTAGTAATACTGCACAGACTTCTTCAGGATATGACATGTATAGATGTGAAGGTTTATATGATGGTAAAATGGGCAGAGCTTTTGGAGGGTATGATATTTATGCTCCTTATGGCGGGTTCGGTGGAAACTATGCCAATTTCTACAGTGCATACAGTTACGGTTTTGGTTATGGTGGTTCGATGTATATGAATGGTAGATATGGGATGAATGGATATGGCATCCCCGATGCCTACGGTTGTACAGCAGTTGGATATGGAAGTAATGGATATGGAAAAGGATATCCAGGAAATGGTGGTTCAATGCCTGAAAGATATCATCCATATTGGTATTGA

mRNA sequence

ATGGCGGAAGAAAGGAATTCCAATGCTGACTTCAATGCTTACAATGGCGATGGTTTTCTCCAAATGTACGATCACCAGCAGCAGTTTGATTTGGGGAGTGAATTGGAACGAGGCAATGTTGATAGTACAGGAAGTGAGATGAAGCATTCGACGAGTCATTTTGATTCTTCTTCCACTGGCAAACTTTTCGTTGGAGGCGTTTCTTGGGAGACCACTGAAGAGACCTTTCGTGATTACTTTAGCAAGTATGGGGTAATAGCAGATTCAGTCATAATGATGGACAAACACACTGGAAGACCACGCGGGTTCGGTTTTGTAACATTCTCTGATCCTACAGTTGCTGACATGGTTCTGAAGAAAGACCATGTTATAGATGGCAGAGCGGTGGAAGTGAAGAGGACAGTTCCTAGGGCTGATATGAATGATAAATTGGTATCAAGAACAAAGAAAATTTTTGTTGGTGGGATACCACCTGCTTTGACCGAAGATGAGTTTAAGGATTACTTCTCTTCTTTTGGTAGCATCATTGAACACCAAATCATGATAGATTATAGAACGAAGCGGTCCAGAGGATTTGGATTTATCACTTTTGAGAGTGAAGAAGCAGTTGAAAATATCTTTGCTGGAGACAAAAGACATGAGCTTGGAGGCAAGCAGGTGGAAATCAAGAAGGCTGTACCAAGAAGAGTTGCTTGTGATTTCAGTAGTAATACTGCACAGACTTCTTCAGGATATGACATGTATAGATGTGAAGGTTTATATGATGGTAAAATGGGCAGAGCTTTTGGAGGGTATGATATTTATGCTCCTTATGGCGGGTTCGGTGGAAACTATGCCAATTTCTACAGTGCATACAGTTACGGTTTTGGTTATGGTGGTTCGATGTATATGAATGGTAGATATGGGATGAATGGATATGGCATCCCCGATGCCTACGGTTGTACAGCAGTTGGATATGGAAGTAATGGATATGGAAAAGGATATCCAGGAAATGGTGGTTCAATGCCTGAAAGATATCATCCATATTGGTATTGA

Coding sequence (CDS)

ATGGCGGAAGAAAGGAATTCCAATGCTGACTTCAATGCTTACAATGGCGATGGTTTTCTCCAAATGTACGATCACCAGCAGCAGTTTGATTTGGGGAGTGAATTGGAACGAGGCAATGTTGATAGTACAGGAAGTGAGATGAAGCATTCGACGAGTCATTTTGATTCTTCTTCCACTGGCAAACTTTTCGTTGGAGGCGTTTCTTGGGAGACCACTGAAGAGACCTTTCGTGATTACTTTAGCAAGTATGGGGTAATAGCAGATTCAGTCATAATGATGGACAAACACACTGGAAGACCACGCGGGTTCGGTTTTGTAACATTCTCTGATCCTACAGTTGCTGACATGGTTCTGAAGAAAGACCATGTTATAGATGGCAGAGCGGTGGAAGTGAAGAGGACAGTTCCTAGGGCTGATATGAATGATAAATTGGTATCAAGAACAAAGAAAATTTTTGTTGGTGGGATACCACCTGCTTTGACCGAAGATGAGTTTAAGGATTACTTCTCTTCTTTTGGTAGCATCATTGAACACCAAATCATGATAGATTATAGAACGAAGCGGTCCAGAGGATTTGGATTTATCACTTTTGAGAGTGAAGAAGCAGTTGAAAATATCTTTGCTGGAGACAAAAGACATGAGCTTGGAGGCAAGCAGGTGGAAATCAAGAAGGCTGTACCAAGAAGAGTTGCTTGTGATTTCAGTAGTAATACTGCACAGACTTCTTCAGGATATGACATGTATAGATGTGAAGGTTTATATGATGGTAAAATGGGCAGAGCTTTTGGAGGGTATGATATTTATGCTCCTTATGGCGGGTTCGGTGGAAACTATGCCAATTTCTACAGTGCATACAGTTACGGTTTTGGTTATGGTGGTTCGATGTATATGAATGGTAGATATGGGATGAATGGATATGGCATCCCCGATGCCTACGGTTGTACAGCAGTTGGATATGGAAGTAATGGATATGGAAAAGGATATCCAGGAAATGGTGGTTCAATGCCTGAAAGATATCATCCATATTGGTATTGA

Protein sequence

MAEERNSNADFNAYNGDGFLQMYDHQQQFDLGSELERGNVDSTGSEMKHSTSHFDSSSTGKLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADMVLKKDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSNTAQTSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYANFYSAYSYGFGYGGSMYMNGRYGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY

Homology

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BLAST of Lag0003111 vs. NCBI nr
Match: XP_038898204.1 (protein gar2-like [Benincasa hispida])

HSP 1 Score: 576.6 bits (1485), Expect = 1.4e-160
Identity = 283/342 (82.75%), Postives = 305/342 (89.18%), Query Frame = 0


Query: 1   MAEERNSNADFNAYNGDGFLQMYDHQQQFDLGSELERGNVDSTGSEMKHSTSHFDSSSTG 60
           MAEER+ N DFNAYNG+ FLQMYD Q QFD+GSELE+GNVDST + +KHST+H+DSSS+G
Sbjct: 366 MAEERHYNPDFNAYNGENFLQMYDQQHQFDMGSELEQGNVDSTSNGIKHSTNHYDSSSSG 425

Query: 61  KLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADMVLKK 120
           KLFVGGV+WETTEETF  YFSKYG IADSVIM+DKHTGRPRGFGFVTF DP VADMVLK 
Sbjct: 426 KLFVGGVAWETTEETFNGYFSKYGKIADSVIMLDKHTGRPRGFGFVTFCDPAVADMVLKI 485

Query: 121 DHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQI 180
           DHVIDGRAVEVKRTVPR DMNDK VSRTKKIFVGGIPP LTE+EFKDYFSSFG IIEHQI
Sbjct: 486 DHVIDGRAVEVKRTVPRTDMNDKSVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 545

Query: 181 MIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSNTAQ 240
           MIDY+TKRSRGFGFITFE+E++VENIFAGDK HELGGKQVEIKKAVP+RVA D +SN A 
Sbjct: 546 MIDYKTKRSRGFGFITFENEDSVENIFAGDKIHELGGKQVEIKKAVPKRVAYDVNSNNAH 605

Query: 241 TSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYANFYSAYSYGFGYGGSMYMNGR 300
            SSGYDMYRC GLYDGKMG  F  YD+YAPYGG+GGNYANFYSAYSYGFGYGGSMYMNGR
Sbjct: 606 MSSGYDMYRCGGLYDGKMGTDFSRYDVYAPYGGYGGNYANFYSAYSYGFGYGGSMYMNGR 665

Query: 301 YGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPY 343
           +GMNGYG+P      A GYG NGYGKGY GNGGSMPERYHPY
Sbjct: 666 FGMNGYGVP------AAGYGYNGYGKGYEGNGGSMPERYHPY 701

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BLAST of Lag0003111 vs. NCBI nr
Match: XP_022150110.1 (protein gar2-like [Momordica charantia])

HSP 1 Score: 559.7 bits (1441), Expect = 1.8e-155
Identity = 278/345 (80.58%), Postives = 304/345 (88.12%), Query Frame = 0


Query: 2   AEERNSNADFNAYNGDGFLQMYDHQQQFDLGSELER-GNVDSTGSEMKHSTSHFDSSSTG 61
           A E +SNADFNAYNGDGFL+ Y+  Q FDLG E ER  NVDSTG E+KH TSH+DSSS+G
Sbjct: 369 ATETHSNADFNAYNGDGFLEQYEQPQPFDLGREFERHSNVDSTGCEIKHVTSHYDSSSSG 428

Query: 62  KLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADMVLKK 121
           KLFVGGVSWETTEETF +YF KYG IADSVIMMDKHTGRPRGFGFVTFSDP +ADMVL+K
Sbjct: 429 KLFVGGVSWETTEETFSEYFGKYGDIADSVIMMDKHTGRPRGFGFVTFSDPAIADMVLRK 488

Query: 122 DHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQI 181
           +HVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPP LTED FKDYFSSFG IIEHQI
Sbjct: 489 EHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPCLTEDGFKDYFSSFGCIIEHQI 548

Query: 182 MIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSNTAQ 241
           MIDY+T+RSRGFGFITFE+E+AVENIFAG + HELGGKQVEIKKAVP+R   DFSSNTA+
Sbjct: 549 MIDYQTRRSRGFGFITFENEDAVENIFAGGRIHELGGKQVEIKKAVPKRGTNDFSSNTAK 608

Query: 242 TSSGYDMYRCEGLYDGKMGRAFGGYDIY-APYGGFGGNYANFYSAYSYGFGYGGSMYMNG 301
            S+G+D YR  G+YDGKM RA GGYD+Y  PYGGFGGNYA+FY    YGFGYGG+MY N 
Sbjct: 609 NSAGFDRYRSGGVYDGKMDRALGGYDVYTTPYGGFGGNYASFYG--GYGFGYGGAMYTNA 668

Query: 302 RYGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           RYGMNGYGIP+ YGCT VGYG+NG+GKGY GNGGSMPERYHPYWY
Sbjct: 669 RYGMNGYGIPNGYGCT-VGYGANGFGKGYQGNGGSMPERYHPYWY 710

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BLAST of Lag0003111 vs. NCBI nr
Match: XP_011659642.1 (protein gar2 [Cucumis sativus])

HSP 1 Score: 553.9 bits (1426), Expect = 9.7e-154
Identity = 272/344 (79.07%), Postives = 305/344 (88.66%), Query Frame = 0


Query: 1   MAEERNSNADFNAYNGDGFLQMYDHQQQFDLGSELERGNVDSTGSEMKHSTSHFDSSSTG 60
           MA ER+ N DFNA NG+   QMYD Q+QFD+G+ELE+ NVDST SE+K+ST+ +DSSS+G
Sbjct: 372 MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG 431

Query: 61  KLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADMVLKK 120
           KLFVGGV+WETTE+TFRDYFSKYG IADSVIM+DKHTGRPRGFGFVTF DP +ADMVLK 
Sbjct: 432 KLFVGGVAWETTEDTFRDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 491

Query: 121 DHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQI 180
           DH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPP LTE+EFKDYFSSFG IIEHQI
Sbjct: 492 DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 551

Query: 181 MIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSNTAQ 240
           MIDY+TKRSRGFGFITFE+E++VENIF+GD+ HELGGKQVEIKKAVP+RVA DF+SN+ Q
Sbjct: 552 MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ 611

Query: 241 TSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYANFYSAYSYGFGYGGSMYMNGR 300
           T SGYDMYRC GLYD  +G  FG YD+YAPYGGFG NYA+FY AY+YGFGYG SMYMNGR
Sbjct: 612 T-SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNGR 671

Query: 301 YGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           YGMNGYG P      +VGYG NGYGKGY GNGGSMPER+HPYWY
Sbjct: 672 YGMNGYGTP------SVGYGINGYGKGYEGNGGSMPERFHPYWY 708

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BLAST of Lag0003111 vs. NCBI nr
Match: KGN45519.1 (hypothetical protein Csa_016070 [Cucumis sativus])

HSP 1 Score: 553.9 bits (1426), Expect = 9.7e-154
Identity = 272/344 (79.07%), Postives = 305/344 (88.66%), Query Frame = 0


Query: 1   MAEERNSNADFNAYNGDGFLQMYDHQQQFDLGSELERGNVDSTGSEMKHSTSHFDSSSTG 60
           MA ER+ N DFNA NG+   QMYD Q+QFD+G+ELE+ NVDST SE+K+ST+ +DSSS+G
Sbjct: 1   MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG 60

Query: 61  KLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADMVLKK 120
           KLFVGGV+WETTE+TFRDYFSKYG IADSVIM+DKHTGRPRGFGFVTF DP +ADMVLK 
Sbjct: 61  KLFVGGVAWETTEDTFRDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 120

Query: 121 DHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQI 180
           DH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPP LTE+EFKDYFSSFG IIEHQI
Sbjct: 121 DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 180

Query: 181 MIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSNTAQ 240
           MIDY+TKRSRGFGFITFE+E++VENIF+GD+ HELGGKQVEIKKAVP+RVA DF+SN+ Q
Sbjct: 181 MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ 240

Query: 241 TSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYANFYSAYSYGFGYGGSMYMNGR 300
           T SGYDMYRC GLYD  +G  FG YD+YAPYGGFG NYA+FY AY+YGFGYG SMYMNGR
Sbjct: 241 T-SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNGR 300

Query: 301 YGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           YGMNGYG P      +VGYG NGYGKGY GNGGSMPER+HPYWY
Sbjct: 301 YGMNGYGTP------SVGYGINGYGKGYEGNGGSMPERFHPYWY 337

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BLAST of Lag0003111 vs. NCBI nr
Match: TYK03902.1 (heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo var. makuwa])

HSP 1 Score: 543.5 bits (1399), Expect = 1.3e-150
Identity = 268/347 (77.23%), Postives = 302/347 (87.03%), Query Frame = 0


Query: 1   MAEERNSNADFN---AYNGDGFLQMYDHQQQFDLGSELERGNVDSTGSEMKHSTSHFDSS 60
           MAEER+ N DFN     NG  FLQ  + Q+QFD+ +ELE+ NVDST SE+K+ST+ +DSS
Sbjct: 1   MAEERHYNPDFNICHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 60

Query: 61  STGKLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADMV 120
           S+GKLFVGGV+WETTE+TF DYFSKYG IADSVIM+DKHTGRPRGFGFVTF DP +ADMV
Sbjct: 61  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 120

Query: 121 LKKDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIE 180
           LK DH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPP LTE EFKDYFSSFG IIE
Sbjct: 121 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 180

Query: 181 HQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSN 240
           HQIMIDY+TKRSRGFGFITFE+E++V+NIF+GD+ HELGGKQVEIKKAVP++VA DF+SN
Sbjct: 181 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 240

Query: 241 TAQTSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYANFYSAYSYGFGYGGSMYM 300
           +  TSSGYDMYRC GLYD  +G  FG YD+YAPYGGFGGNYA+FY AY+YGFGYG SMYM
Sbjct: 241 SGHTSSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGYGASMYM 300

Query: 301 NGRYGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           NGRYGMNGYG P      +VGYG NGYGKGY GNGGSMPER+HPYWY
Sbjct: 301 NGRYGMNGYGAP------SVGYGINGYGKGYEGNGGSMPERFHPYWY 341

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BLAST of Lag0003111 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.7e-48
Identity = 125/300 (41.67%), Postives = 167/300 (55.67%), Query Frame = 0


Query: 57  SSTGKLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADM 116
           S  GKLFVGG+SWET E+  R++F+ YG ++ +++M DK TGRPRGFGFV FSDP+V D 
Sbjct: 3   SDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDR 62

Query: 117 VLKKDHVIDGRAVEVKRTVPRADM---------------NDKLVSRTKKIFVGGIPPALT 176
           VL++ H ID R V+VKR + R +                     ++TKKIFVGG+PP LT
Sbjct: 63  VLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLT 122

Query: 177 EDEFKDYFSSFGSIIEHQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVE 236
           ++EF+ YF  +G + +  IM D  T R RGFGF++F+SE+AV+++      H+L GKQVE
Sbjct: 123 DEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVL-HKTFHDLSGKQVE 182

Query: 237 IKKAVPR--RVACDFSSNTAQTSSGYDMY-RCEGLYDGKM--GRAFGGYDIYAPYGGFGG 296
           +K+A+P+         S     S GY  Y   E  YDG+M   R      +        G
Sbjct: 183 VKRALPKDANPGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSV--------G 242

Query: 297 NYANFYSAYSYGFGYGGSMYMNGRYGMNGYGIPDAYGCTAVGYGSN---GYG-KGYPGNG 333
           N    Y +  YG GYG     NG  G  GYG    Y  +A GYG+    GYG    PG G
Sbjct: 243 NGLPSYGSSGYGAGYG-----NGSNGA-GYGAYGGYTGSAGGYGAGATAGYGATNIPGAG 287

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BLAST of Lag0003111 vs. ExPASy Swiss-Prot
Match: Q99383 (Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HRP1 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 8.0e-42
Identity = 96/247 (38.87%), Postives = 147/247 (59.51%), Query Frame = 0


Query: 6   NSNADFNAYNGDGFLQMYDHQQQFDLGSELERGNVDSTGSEMKHSTSHFDSSSTGKLFVG 65
           N+NA     +G  + Q+     QF   S         T ++ + S +     S  K+F+G
Sbjct: 106 NANASSAGPSGLPWEQLQQTMSQFQQPSSQSPPQQQVTQTKEERSKADLSKESC-KMFIG 165

Query: 66  GVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADMVLKKDHVID 125
           G++W+TTE+  R+YF KYG + D  IM D  TGR RGFGF++F  P+  D V+K  H++D
Sbjct: 166 GLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILD 225

Query: 126 GRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQIMIDYR 185
           G+ ++ KR +PR D  DK    T KIFVGGI P +   EF+++FS +G+II+ Q+M+D  
Sbjct: 226 GKVIDPKRAIPR-DEQDK----TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKD 285

Query: 186 TKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSNTAQTSSGY 245
           T +SRGFGF+T++S +AV+ +   +K  +   +++EIK+A PR +    SSN    + G 
Sbjct: 286 TGQSRGFGFVTYDSADAVDRV-CQNKFIDFKDRKIEIKRAEPRHMQ-QKSSNNGGNNGGN 344

Query: 246 DMYRCEG 253
           +M R  G
Sbjct: 346 NMNRRGG 344

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BLAST of Lag0003111 vs. ExPASy Swiss-Prot
Match: Q9VVE5 (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster OX=7227 GN=Rbp6 PE=2 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 1.8e-41
Identity = 94/220 (42.73%), Postives = 132/220 (60.00%), Query Frame = 0


Query: 60  GKLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADMVLK 119
           GK+F+GG+SW+T+ E+ RDYF +YG I+++++M D  T R RGFGFVTFSDP   D VL 
Sbjct: 29  GKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLT 88

Query: 120 K-DHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEH 179
           +  H +DG+ V+ K   PR   + K+V+RTKKIFVGG+    T ++ K YF  FG I + 
Sbjct: 89  QGTHELDGKKVDPKVAFPRR-AHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDA 148

Query: 180 QIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRV--ACDFSS 239
            +M D +T R RGFGF+TF+SE+ V+ +      HE+  K VE KKA P+ V    + + 
Sbjct: 149 MLMFDKQTNRHRGFGFVTFQSEDVVDKV-CEIHFHEINNKMVECKKAQPKEVMLPANLAK 208

Query: 240 NTAQTSSGYD--MYRCEGLYDGKMGRAFGGYDIYAPYGGF 275
             A   S YD  M+    L +G    A+  Y     Y G+
Sbjct: 209 TRAAGRSAYDNIMWGLGTLPEGFPAAAYAAYAAGRGYSGY 246

[Close]

BLAST of Lag0003111 vs. ExPASy Swiss-Prot
Match: O94432 (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC660.15 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.5e-40
Identity = 82/206 (39.81%), Postives = 128/206 (62.14%), Query Frame = 0


Query: 23  YDHQQQFDLGSELERGNVDSTGSEMKHSTSHFDSSSTGKLFVGGVSWETTEETFRDYFSK 82
           Y+  Q    GS     N D+        TS F+    GK+F+GG++WETT+++ RDYF +
Sbjct: 132 YNENQSALTGSGAMESNEDNA-----EETSPFNRED-GKMFIGGLNWETTDDSLRDYFEQ 191

Query: 83  YGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADMVLKKDHVIDGRAVEVKRTVPRADMND 142
           +G + D  +M D  TGR RGFGF+TF +P   + V+ K+H +DG+ ++ KR +PR +   
Sbjct: 192 FGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSKEHHLDGKIIDPKRAIPREEQ-- 251

Query: 143 KLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQIMIDYRTKRSRGFGFITFESEEA 202
               +T K+FVGG+P   TE+EF+++F+ FG +++  +M+D  T R RGFGF+T+E+E A
Sbjct: 252 ---EKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESA 311

Query: 203 VENIFAGDKRHELGGKQVEIKKAVPR 229
           VE   +      + GK VE+K+A P+
Sbjct: 312 VEATMS-QPYITIHGKPVEVKRATPK 325

[Close]

BLAST of Lag0003111 vs. ExPASy Swiss-Prot
Match: P09651 (Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens OX=9606 GN=HNRNPA1 PE=1 SV=5)

HSP 1 Score: 157.1 bits (396), Expect = 3.5e-37
Identity = 108/290 (37.24%), Postives = 146/290 (50.34%), Query Frame = 0


Query: 47  MKHSTSHFDSSSTGKLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFV 106
           M  S S  +     KLF+GG+S+ETT+E+ R +F ++G + D V+M D +T R RGFGFV
Sbjct: 1   MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60

Query: 107 TFSDPTVADMVLK-KDHVIDGRAVEVKRTVPRADMNDKLVSRT-KKIFVGGIPPALTEDE 166
           T++     D  +  + H +DGR VE KR V R D        T KKIFVGGI     E  
Sbjct: 61  TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH 120

Query: 167 FKDYFSSFGSIIEHQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKK 226
            +DYF  +G I   +IM D  + + RGF F+TF+  ++V+ I    K H + G   E++K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRK 180

Query: 227 AVPRRVACDFSSNTAQTSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYANFYSA 286
           A+ ++     SS+    S         G + G  G  FGG D +   G F G     +  
Sbjct: 181 ALSKQEMASASSSQRGRSG-------SGNFGGGRGGGFGGNDNFGRGGNFSGR--GGFGG 240

Query: 287 YSYGFGYGGSMYMNGRYGMNGYGIPDAYGCTAVGY--GSNGYGKGYPGNG 333
              G GYGGS       G NG+G    YG    GY  GS GYG G  G G
Sbjct: 241 SRGGGGYGGS-----GDGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYG 275

[Close]

BLAST of Lag0003111 vs. ExPASy TrEMBL
Match: A0A6J1D7K7 (protein gar2-like OS=Momordica charantia OX=3673 GN=LOC111018368 PE=4 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 8.6e-156
Identity = 278/345 (80.58%), Postives = 304/345 (88.12%), Query Frame = 0


Query: 2   AEERNSNADFNAYNGDGFLQMYDHQQQFDLGSELER-GNVDSTGSEMKHSTSHFDSSSTG 61
           A E +SNADFNAYNGDGFL+ Y+  Q FDLG E ER  NVDSTG E+KH TSH+DSSS+G
Sbjct: 369 ATETHSNADFNAYNGDGFLEQYEQPQPFDLGREFERHSNVDSTGCEIKHVTSHYDSSSSG 428

Query: 62  KLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADMVLKK 121
           KLFVGGVSWETTEETF +YF KYG IADSVIMMDKHTGRPRGFGFVTFSDP +ADMVL+K
Sbjct: 429 KLFVGGVSWETTEETFSEYFGKYGDIADSVIMMDKHTGRPRGFGFVTFSDPAIADMVLRK 488

Query: 122 DHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQI 181
           +HVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPP LTED FKDYFSSFG IIEHQI
Sbjct: 489 EHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPCLTEDGFKDYFSSFGCIIEHQI 548

Query: 182 MIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSNTAQ 241
           MIDY+T+RSRGFGFITFE+E+AVENIFAG + HELGGKQVEIKKAVP+R   DFSSNTA+
Sbjct: 549 MIDYQTRRSRGFGFITFENEDAVENIFAGGRIHELGGKQVEIKKAVPKRGTNDFSSNTAK 608

Query: 242 TSSGYDMYRCEGLYDGKMGRAFGGYDIY-APYGGFGGNYANFYSAYSYGFGYGGSMYMNG 301
            S+G+D YR  G+YDGKM RA GGYD+Y  PYGGFGGNYA+FY    YGFGYGG+MY N 
Sbjct: 609 NSAGFDRYRSGGVYDGKMDRALGGYDVYTTPYGGFGGNYASFYG--GYGFGYGGAMYTNA 668

Query: 302 RYGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           RYGMNGYGIP+ YGCT VGYG+NG+GKGY GNGGSMPERYHPYWY
Sbjct: 669 RYGMNGYGIPNGYGCT-VGYGANGFGKGYQGNGGSMPERYHPYWY 710

[Close]

BLAST of Lag0003111 vs. ExPASy TrEMBL
Match: A0A0A0K9M1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450760 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.7e-154
Identity = 272/344 (79.07%), Postives = 305/344 (88.66%), Query Frame = 0


Query: 1   MAEERNSNADFNAYNGDGFLQMYDHQQQFDLGSELERGNVDSTGSEMKHSTSHFDSSSTG 60
           MA ER+ N DFNA NG+   QMYD Q+QFD+G+ELE+ NVDST SE+K+ST+ +DSSS+G
Sbjct: 1   MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG 60

Query: 61  KLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADMVLKK 120
           KLFVGGV+WETTE+TFRDYFSKYG IADSVIM+DKHTGRPRGFGFVTF DP +ADMVLK 
Sbjct: 61  KLFVGGVAWETTEDTFRDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 120

Query: 121 DHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIEHQI 180
           DH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPP LTE+EFKDYFSSFG IIEHQI
Sbjct: 121 DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 180

Query: 181 MIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSNTAQ 240
           MIDY+TKRSRGFGFITFE+E++VENIF+GD+ HELGGKQVEIKKAVP+RVA DF+SN+ Q
Sbjct: 181 MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ 240

Query: 241 TSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYANFYSAYSYGFGYGGSMYMNGR 300
           T SGYDMYRC GLYD  +G  FG YD+YAPYGGFG NYA+FY AY+YGFGYG SMYMNGR
Sbjct: 241 T-SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNGR 300

Query: 301 YGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           YGMNGYG P      +VGYG NGYGKGY GNGGSMPER+HPYWY
Sbjct: 301 YGMNGYGTP------SVGYGINGYGKGYEGNGGSMPERFHPYWY 337

[Close]

BLAST of Lag0003111 vs. ExPASy TrEMBL
Match: A0A5A7UU27 (Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G001500 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 6.3e-151
Identity = 268/347 (77.23%), Postives = 302/347 (87.03%), Query Frame = 0


Query: 1   MAEERNSNADFN---AYNGDGFLQMYDHQQQFDLGSELERGNVDSTGSEMKHSTSHFDSS 60
           MAEER+ N DFN     NG  FLQ  + Q+QFD+ +ELE+ NVDST SE+K+ST+ +DSS
Sbjct: 379 MAEERHYNPDFNICHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 438

Query: 61  STGKLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADMV 120
           S+GKLFVGGV+WETTE+TF DYFSKYG IADSVIM+DKHTGRPRGFGFVTF DP +ADMV
Sbjct: 439 SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 498

Query: 121 LKKDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIE 180
           LK DH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPP LTE EFKDYFSSFG IIE
Sbjct: 499 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 558

Query: 181 HQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSN 240
           HQIMIDY+TKRSRGFGFITFE+E++V+NIF+GD+ HELGGKQVEIKKAVP++VA DF+SN
Sbjct: 559 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 618

Query: 241 TAQTSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYANFYSAYSYGFGYGGSMYM 300
           +  TSSGYDMYRC GLYD  +G  FG YD+YAPYGGFGGNYA+FY AY+YGFGYG SMYM
Sbjct: 619 SGHTSSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGYGASMYM 678

Query: 301 NGRYGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           NGRYGMNGYG P      +VGYG NGYGKGY GNGGSMPER+HPYWY
Sbjct: 679 NGRYGMNGYGAP------SVGYGINGYGKGYEGNGGSMPERFHPYWY 719

[Close]

BLAST of Lag0003111 vs. ExPASy TrEMBL
Match: A0A5D3BYF2 (Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00980 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 6.3e-151
Identity = 268/347 (77.23%), Postives = 302/347 (87.03%), Query Frame = 0


Query: 1   MAEERNSNADFN---AYNGDGFLQMYDHQQQFDLGSELERGNVDSTGSEMKHSTSHFDSS 60
           MAEER+ N DFN     NG  FLQ  + Q+QFD+ +ELE+ NVDST SE+K+ST+ +DSS
Sbjct: 1   MAEERHYNPDFNICHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 60

Query: 61  STGKLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADMV 120
           S+GKLFVGGV+WETTE+TF DYFSKYG IADSVIM+DKHTGRPRGFGFVTF DP +ADMV
Sbjct: 61  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 120

Query: 121 LKKDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIE 180
           LK DH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPP LTE EFKDYFSSFG IIE
Sbjct: 121 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 180

Query: 181 HQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSN 240
           HQIMIDY+TKRSRGFGFITFE+E++V+NIF+GD+ HELGGKQVEIKKAVP++VA DF+SN
Sbjct: 181 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 240

Query: 241 TAQTSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYANFYSAYSYGFGYGGSMYM 300
           +  TSSGYDMYRC GLYD  +G  FG YD+YAPYGGFGGNYA+FY AY+YGFGYG SMYM
Sbjct: 241 SGHTSSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGYGASMYM 300

Query: 301 NGRYGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           NGRYGMNGYG P      +VGYG NGYGKGY GNGGSMPER+HPYWY
Sbjct: 301 NGRYGMNGYGAP------SVGYGINGYGKGYEGNGGSMPERFHPYWY 341

[Close]

BLAST of Lag0003111 vs. ExPASy TrEMBL
Match: E5GCB7 (Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.8e-150
Identity = 267/347 (76.95%), Postives = 302/347 (87.03%), Query Frame = 0


Query: 1   MAEERNSNADFN---AYNGDGFLQMYDHQQQFDLGSELERGNVDSTGSEMKHSTSHFDSS 60
           MAEER+ N DFN     NG  FLQ  + Q+QFD+ +ELE+ NVDST SE+K+ST+ +DSS
Sbjct: 359 MAEERHYNPDFNLCHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 418

Query: 61  STGKLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADMV 120
           S+GKLFVGGV+WETTE+TF DYFSKYG IADSVIM+DKHTGRPRGFGFVTF DP +ADMV
Sbjct: 419 SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 478

Query: 121 LKKDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFGSIIE 180
           LK DH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPP LTE EFKDYFSSFG IIE
Sbjct: 479 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 538

Query: 181 HQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDFSSN 240
           HQIMIDY+TKRSRGFGFITFE+E++V+NIF+GD+ HELGGKQVEIKKAVP++VA DF+SN
Sbjct: 539 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 598

Query: 241 TAQTSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGGNYANFYSAYSYGFGYGGSMYM 300
           +  TSSGYDMYRC GLYD  +G  FG YD+YAPYGGFGGNYA+FY AY+YGFG+G SMYM
Sbjct: 599 SGHTSSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGFGASMYM 658

Query: 301 NGRYGMNGYGIPDAYGCTAVGYGSNGYGKGYPGNGGSMPERYHPYWY 345
           NGRYGMNGYG P      +VGYG NGYGKGY GNGGSMPER+HPYWY
Sbjct: 659 NGRYGMNGYGAP------SVGYGINGYGKGYEGNGGSMPERFHPYWY 699

[Close]

BLAST of Lag0003111 vs. TAIR 10
Match: AT1G17640.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 294.7 bits (753), Expect = 9.9e-80
Identity = 182/370 (49.19%), Postives = 226/370 (61.08%), Query Frame = 0


Query: 14  YNGD-GFLQMYDH--------QQQFDLGSELERGN----VDSTGSEMKHSTSHFDSSST- 73
           YN D G+   Y H        Q  F++ +  +R N    VD+ G +MKHS  H  SSS+ 
Sbjct: 3   YNSDRGYDDSYHHHVHDEQLPQSDFEVETFDDRRNGGAAVDTGGIQMKHSVDHRHSSSSM 62

Query: 74  ---GKLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADM 133
              GKLFVGGVSWETT ETF +YF K+G + DSVIM D+ TG PRGFGFVTF+D  VA+ 
Sbjct: 63  SSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEK 122

Query: 134 VLKKDHVIDGRAVEVKRTVPRADMND--KLVSRTKKIFVGGIPPALTEDEFKDYFSSFGS 193
           VL++DHVID R V++KRT+PR D +   K VS+T+KIFVGG+PP L EDE K+YF  +G 
Sbjct: 123 VLEEDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGD 182

Query: 194 IIEHQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACDF 253
           IIEHQIM D+ T RSRGFGF+TF++E++V+ +F+  K HELG KQVEIK+A P+R   D 
Sbjct: 183 IIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGRDN 242

Query: 254 SSNTAQTSSGYDMYRCEGLYDGKMGRAFGGYDIYAPYGGFGG-------NYANFY---SA 313
           S  +   S  YD    E  Y GK    +  Y  Y  YGG+G        N A FY     
Sbjct: 243 SFRSYGASGKYDQ---EDSYSGKANEDYSMYSGYGGYGGYGAYAGNSMVNPAGFYGYGGG 302

Query: 314 YSYGFGYGGSMYMNGRYGMNGYG-IPDAYGCTAV---------GYGSNGYGKGYPGNG-- 343
           Y YG+GYGG M+  G YG  GY  +   YG  A          G G+NG   G  GNG  
Sbjct: 303 YGYGYGYGGQMFNMG-YGAGGYSHMGSGYGVAAAAAYGGGKSHGNGNNGSSSG-KGNGTN 362

[Close]

BLAST of Lag0003111 vs. TAIR 10
Match: AT5G40490.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 214.2 bits (544), Expect = 1.7e-55
Identity = 137/310 (44.19%), Postives = 178/310 (57.42%), Query Frame = 0


Query: 41  DSTGSEMKHSTSHFDSSSTGKLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRP 100
           D       HS    DS+  GK+FVGG++ ETT   F  +F KYG I DSVIM D+ TG+P
Sbjct: 25  DDDDKSQPHSGGGVDSA--GKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQP 84

Query: 101 RGFGFVTFSDPTVADMVLKKDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPAL 160
           RGFGFVT++D +V D V++ +H+I G+ VE+KRT+PR  M+     +TKKIFVGGIP ++
Sbjct: 85  RGFGFVTYADSSVVDKVIQDNHIIIGKQVEIKRTIPRGSMSSN-DFKTKKIFVGGIPSSV 144

Query: 161 TEDEFKDYFSSFGSIIEHQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQV 220
            +DEFK++F  FG + EHQIM D+ T RSRGFGF+T+ESE+ V+++ A   R EL G QV
Sbjct: 145 DDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQV 204

Query: 221 EIKKAVPRR------VACDFSSNTAQTSSGYDMYRCEGLYDGKMGRAFGG-YDIYAPYGG 280
           EIKKA P++       +  F  + +    GY     +G Y G  G  +GG    Y   GG
Sbjct: 205 EIKKAEPKKPNSVTTPSKRFGDSRSNFGGGYG----DG-YGGGHGGGYGGPGGPYKSGGG 264

Query: 281 FGGNYANFYSAYSYGF-GYGGSMYMNG---RYGMNGYGIPDAYGCTAVGYGSNGY----G 336
           +GG  +  Y  Y   F GYGG  Y  G     G    G    YG    GY   GY    G
Sbjct: 265 YGGGRSGGYGGYGGEFGGYGGGGYGGGVGPYRGEPALGYSGRYGGGGGGYNRGGYSMGGG 324

[Close]

BLAST of Lag0003111 vs. TAIR 10
Match: AT3G13224.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 213.4 bits (542), Expect = 2.9e-55
Identity = 123/299 (41.14%), Postives = 169/299 (56.52%), Query Frame = 0


Query: 55  DSSSTGKLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVA 114
           D +S GK+F+GG+  +TT   F  +F KYG I DSVIM D+HTG+PRGFGF+TF+DP+V 
Sbjct: 14  DGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVV 73

Query: 115 DMVLKKDHVIDGRAVEVKRTVPR-ADMNDKLVSRTKKIFVGGIPPALTEDEFKDYFSSFG 174
           D V++  HVI+G+ VE+KRT+P+ A  N     +TKKIFVGGIP  +TEDE KD+F+ +G
Sbjct: 74  DKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDELKDFFAKYG 133

Query: 175 SIIEHQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIKKAVPRRVACD 234
           +++EHQ++ D+ T RSRGFGF+ F+SEE V+ + +     ++   QVEIKKA P++    
Sbjct: 134 NVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKKAEPKKSLNR 193

Query: 235 FSSNTAQTSSGYDMYRCEGLYDGKMGRAFGGY-DIYAPYGGFGGNYANFYSAYSYGFG-- 294
              +      G         Y G  G   GGY     P    GG  + +   Y YG G  
Sbjct: 194 SPPSYGSHPRGRSSNDSYASYGGPYGGFDGGYGHPPGPIRSHGGPASRYAGGYGYGRGSV 253

Query: 295 ---YGGSMYMNGRYGMNGY------GIPDAYGCTAVGYGSNGYGK-------GYPGNGG 334
              +GG     G   + GY      G    +G    G+G  GYG+       GYP  GG
Sbjct: 254 GPEFGGGYNNYGGGSLGGYRNEPPLGYSSRFGPYGSGFGGEGYGRGGEGAYLGYPRGGG 312

[Close]

BLAST of Lag0003111 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 196.8 bits (499), Expect = 2.8e-50
Identity = 125/306 (40.85%), Postives = 172/306 (56.21%), Query Frame = 0


Query: 57  SSTGKLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADM 116
           S  GKLF+GG+SW+T EE  ++YFS +G + ++VI+ D+ TGR RGFGFV F+DP VA++
Sbjct: 3   SDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEI 62

Query: 117 VLKKDHVIDGRAVEVKRTVPRADMNDKLVS-------------RTKKIFVGGIPPALTED 176
           V+ + H IDGR VE K+ VPR D N    S             RT+KIFVGG+P ++TE 
Sbjct: 63  VITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTES 122

Query: 177 EFKDYFSSFGSIIEHQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIK 236
           +FK YF  FG+  +  +M D+ T+R RGFGFIT++SEEAVE +      HEL GK VE+K
Sbjct: 123 DFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLL-KTFHELNGKMVEVK 182

Query: 237 KAVPRRVACDFSSNTAQTSSGYDMYRCEGLYDGKM----GRAFGGYDI-----YAPYGGF 296
           +AVP+ ++   S +       Y + R   L +G        A GGY +     ++P G  
Sbjct: 183 RAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGAG 242

Query: 297 GGNYANFYSAYSYGF--------GYGGSMYMNGRY----GMNGY--GIPDAYGCTAVGY- 326
              +AN+ S Y            G+ G    NG      GM+ Y  G  + +G  AVGY 
Sbjct: 243 RSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFG-PAVGYE 302

[Close]

BLAST of Lag0003111 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 196.8 bits (499), Expect = 2.8e-50
Identity = 125/306 (40.85%), Postives = 172/306 (56.21%), Query Frame = 0


Query: 57  SSTGKLFVGGVSWETTEETFRDYFSKYGVIADSVIMMDKHTGRPRGFGFVTFSDPTVADM 116
           S  GKLF+GG+SW+T EE  ++YFS +G + ++VI+ D+ TGR RGFGFV F+DP VA++
Sbjct: 3   SDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEI 62

Query: 117 VLKKDHVIDGRAVEVKRTVPRADMNDKLVS-------------RTKKIFVGGIPPALTED 176
           V+ + H IDGR VE K+ VPR D N    S             RT+KIFVGG+P ++TE 
Sbjct: 63  VITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTES 122

Query: 177 EFKDYFSSFGSIIEHQIMIDYRTKRSRGFGFITFESEEAVENIFAGDKRHELGGKQVEIK 236
           +FK YF  FG+  +  +M D+ T+R RGFGFIT++SEEAVE +      HEL GK VE+K
Sbjct: 123 DFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLL-KTFHELNGKMVEVK 182

Query: 237 KAVPRRVACDFSSNTAQTSSGYDMYRCEGLYDGKM----GRAFGGYDI-----YAPYGGF 296
           +AVP+ ++   S +       Y + R   L +G        A GGY +     ++P G  
Sbjct: 183 RAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGAG 242

Query: 297 GGNYANFYSAYSYGF--------GYGGSMYMNGRY----GMNGY--GIPDAYGCTAVGY- 326
              +AN+ S Y            G+ G    NG      GM+ Y  G  + +G  AVGY 
Sbjct: 243 RSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFG-PAVGYE 302

The following BLAST results are available for this feature:

BLAST of Lag0003111 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898204.1	1.4e-160	82.75	protein gar2-like [Benincasa hispida]	[more]
XP_022150110.1	1.8e-155	80.58	protein gar2-like [Momordica charantia]	[more]
XP_011659642.1	9.7e-154	79.07	protein gar2 [Cucumis sativus]	[more]
KGN45519.1	9.7e-154	79.07	hypothetical protein Csa_016070 [Cucumis sativus]	[more]
TYK03902.1	1.3e-150	77.23	heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo var. makuwa]	[more]

BLAST of Lag0003111 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	5.7e-48	41.67	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
Q99383	8.0e-42	38.87	Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain...	[more]
Q9VVE5	1.8e-41	42.73	RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster OX=7227 GN=R...	[more]
O94432	1.5e-40	39.81	Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain...	[more]
P09651	3.5e-37	37.24	Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens OX=9606 GN=HNRNPA1 PE...	[more]

BLAST of Lag0003111 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D7K7	8.6e-156	80.58	protein gar2-like OS=Momordica charantia OX=3673 GN=LOC111018368 PE=4 SV=1	[more]
A0A0A0K9M1	4.7e-154	79.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450760 PE=4 SV=1	[more]
A0A5A7UU27	6.3e-151	77.23	Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5D3BYF2	6.3e-151	77.23	Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo var. makuwa OX=119469...	[more]
E5GCB7	1.8e-150	76.95	Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo subsp. melo OX=412675...	[more]

BLAST of Lag0003111 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17640.1	9.9e-80	49.19	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G40490.1	1.7e-55	44.19	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G13224.2	2.9e-55	41.14	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	2.8e-50	40.85	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	2.8e-50	40.85	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 61..132 e-value: 6.1E-24 score: 95.5 coord: 150..223 e-value: 1.0E-21 score: 88.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 62..120 e-value: 3.2E-14 score: 52.5 coord: 151..220 e-value: 3.1E-17 score: 62.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 60..136 score: 17.097071
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 149..227 score: 17.915731
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 59..141 e-value: 2.2E-26 score: 93.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 148..229 e-value: 6.3E-24 score: 86.0
None	No IPR available	PANTHER	PTHR11176:SF42	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 52..329
None	No IPR available	CDD	cd12325	RRM1_hnRNPA_hnRNPD_like	coord: 62..132 e-value: 3.71555E-37 score: 126.161
IPR037366	BOULE/DAZ family	PANTHER	PTHR11176	BOULE-RELATED	coord: 52..329
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 53..140
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 146..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0003111.1	Lag0003111.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding