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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCACCACATGGAGAGGCAATTTCAAGGAGCAACAACTTCTCCAAGCCACCAAGGCTTTCATCCAATGCCCTGCAAAGAACAATCTCAGACATATCAATGGAGTTGGGGAAGGAGTTGGCGATAACATCGGATACCAAACAAGGGGCGCTTCCACCGATATCTGAGATCGAGGATGCGCGGTGTGAGTGTTGTGGAATGTGCGAGGAGTACACGCAAGAGTACATCGATCGGATGCGAGACAAGTTCCTTGGGAAGTGGATATGCGGGCTCTGCGCCGAGGCCGTGGAAGGGGAAGTGGAGAAGCATGGAGGGAGCAAAGAGGCGGCGTTGAACGCGCACATGAGCGCCTGCGTAAGGTTTAACAAACTGGGGAGGGCTTATCCAGTGTTGTTTCAGGCTGAGGCAATGAGAGAGATGTTGAAGAAGAGTAGGATGGATGGGAGAGGTGGTTTCAGGGCCAAGTCTTTGAGTCCTAGAGACAAAGCTGCAGTCCAAAAGAAAGGTGGGATTGCTAGGAGTTCAAGTTGCATTCCAGCCATCACAAGATCAGAGGATATTAACAATCTCAAACTGCAAAACTAA mRNA sequence ATGGCACCACATGGAGAGGCAATTTCAAGGAGCAACAACTTCTCCAAGCCACCAAGGCTTTCATCCAATGCCCTGCAAAGAACAATCTCAGACATATCAATGGAGTTGGGGAAGGAGTTGGCGATAACATCGGATACCAAACAAGGGGCGCTTCCACCGATATCTGAGATCGAGGATGCGCGGTGTGAGTGTTGTGGAATGTGCGAGGAGTACACGCAAGAGTACATCGATCGGATGCGAGACAAGTTCCTTGGGAAGTGGATATGCGGGCTCTGCGCCGAGGCCGTGGAAGGGGAAGTGGAGAAGCATGGAGGGAGCAAAGAGGCGGCGTTGAACGCGCACATGAGCGCCTGCGTAAGGTTTAACAAACTGGGGAGGGCTTATCCAGTGTTGTTTCAGGCTGAGGCAATGAGAGAGATGTTGAAGAAGAGTAGGATGGATGGGAGAGGTGGTTTCAGGGCCAAGTCTTTGAGTCCTAGAGACAAAGCTGCAGTCCAAAAGAAAGGTGGGATTGCTAGGAGTTCAAGTTGCATTCCAGCCATCACAAGATCAGAGGATATTAACAATCTCAAACTGCAAAACTAA Coding sequence (CDS) ATGGCACCACATGGAGAGGCAATTTCAAGGAGCAACAACTTCTCCAAGCCACCAAGGCTTTCATCCAATGCCCTGCAAAGAACAATCTCAGACATATCAATGGAGTTGGGGAAGGAGTTGGCGATAACATCGGATACCAAACAAGGGGCGCTTCCACCGATATCTGAGATCGAGGATGCGCGGTGTGAGTGTTGTGGAATGTGCGAGGAGTACACGCAAGAGTACATCGATCGGATGCGAGACAAGTTCCTTGGGAAGTGGATATGCGGGCTCTGCGCCGAGGCCGTGGAAGGGGAAGTGGAGAAGCATGGAGGGAGCAAAGAGGCGGCGTTGAACGCGCACATGAGCGCCTGCGTAAGGTTTAACAAACTGGGGAGGGCTTATCCAGTGTTGTTTCAGGCTGAGGCAATGAGAGAGATGTTGAAGAAGAGTAGGATGGATGGGAGAGGTGGTTTCAGGGCCAAGTCTTTGAGTCCTAGAGACAAAGCTGCAGTCCAAAAGAAAGGTGGGATTGCTAGGAGTTCAAGTTGCATTCCAGCCATCACAAGATCAGAGGATATTAACAATCTCAAACTGCAAAACTAA Protein sequence MAPHGEAISRSNNFSKPPRLSSNALQRTISDISMELGKELAITSDTKQGALPPISEIEDARCECCGMCEEYTQEYIDRMRDKFLGKWICGLCAEAVEGEVEKHGGSKEAALNAHMSACVRFNKLGRAYPVLFQAEAMREMLKKSRMDGRGGFRAKSLSPRDKAAVQKKGGIARSSSCIPAITRSEDINNLKLQN
Homology
BLAST of Lag0003039 vs. NCBI nr
Match: XP_038898439.1 (uncharacterized protein LOC120086077 [Benincasa hispida]) HSP 1 Score: 379.8 bits (974), Expect = 1.4e-101 Identity = 189/194 (97.42%), Postives = 190/194 (97.94%), Query Frame = 0
Query: 1 MAPHGEAISRSNNFSKPPRLSSNALQRTISDISMELGKELAITSDTKQGALPPISEIEDA 60
MAPHGEAISRSNNFSKPPRLSSN LQRTISDISMELGKELAITSDTKQGALPPISEIEDA
Sbjct: 1 MAPHGEAISRSNNFSKPPRLSSNGLQRTISDISMELGKELAITSDTKQGALPPISEIEDA 60
Query: 61 RCECCGMCEEYTQEYIDRMRDKFLGKWICGLCAEAVEGEVEKHGGSKEAALNAHMSACVR 120
RCECCGMCEEYTQEYIDRMRDKFLGKWICGLCAEAVEGEVEKHGGSKEAALNAHMSACVR
Sbjct: 61 RCECCGMCEEYTQEYIDRMRDKFLGKWICGLCAEAVEGEVEKHGGSKEAALNAHMSACVR 120
Query: 121 FNKLGRAYPVLFQAEAMREMLKKSRMDGRGGFRAKSLSPRDKAAVQKKGGIARSSSCIPA 180
FNKLGRAYPVLFQAEAMREMLKKSR DGR GFRAKSLSPRDKAAVQKKGGIARSSSCIPA
Sbjct: 121 FNKLGRAYPVLFQAEAMREMLKKSRQDGRDGFRAKSLSPRDKAAVQKKGGIARSSSCIPA 180
Query: 181 ITRSEDINNLKLQN 195
I RSED+NNLKLQN
Sbjct: 181 IIRSEDLNNLKLQN 194
BLAST of Lag0003039 vs. NCBI nr
Match: XP_011659684.1 (uncharacterized protein LOC105436220 [Cucumis sativus]) HSP 1 Score: 378.6 bits (971), Expect = 3.2e-101 Identity = 188/194 (96.91%), Postives = 189/194 (97.42%), Query Frame = 0
Query: 1 MAPHGEAISRSNNFSKPPRLSSNALQRTISDISMELGKELAITSDTKQGALPPISEIEDA 60
MAPHGEAISRSNNFSKPPRLSSN LQRTISDISMELGKELAITSDTKQG LPPISEIEDA
Sbjct: 1 MAPHGEAISRSNNFSKPPRLSSNGLQRTISDISMELGKELAITSDTKQGVLPPISEIEDA 60
Query: 61 RCECCGMCEEYTQEYIDRMRDKFLGKWICGLCAEAVEGEVEKHGGSKEAALNAHMSACVR 120
RCECCGMCEEYTQEYIDRMRDKFLGKWICGLCAEAVEGEVEKHGGSKEAALNAHMSACVR
Sbjct: 61 RCECCGMCEEYTQEYIDRMRDKFLGKWICGLCAEAVEGEVEKHGGSKEAALNAHMSACVR 120
Query: 121 FNKLGRAYPVLFQAEAMREMLKKSRMDGRGGFRAKSLSPRDKAAVQKKGGIARSSSCIPA 180
FNKLGRAYPVLFQAEAMREMLKKSRMDGR GFRAKSLSPRDKAAVQKKGGI RSSSCIPA
Sbjct: 121 FNKLGRAYPVLFQAEAMREMLKKSRMDGRDGFRAKSLSPRDKAAVQKKGGIGRSSSCIPA 180
Query: 181 ITRSEDINNLKLQN 195
I RSED+NNLKLQN
Sbjct: 181 IIRSEDLNNLKLQN 194
BLAST of Lag0003039 vs. NCBI nr
Match: KAE8646534.1 (hypothetical protein Csa_016674 [Cucumis sativus]) HSP 1 Score: 378.6 bits (971), Expect = 3.2e-101 Identity = 188/194 (96.91%), Postives = 189/194 (97.42%), Query Frame = 0
Query: 1 MAPHGEAISRSNNFSKPPRLSSNALQRTISDISMELGKELAITSDTKQGALPPISEIEDA 60
MAPHGEAISRSNNFSKPPRLSSN LQRTISDISMELGKELAITSDTKQG LPPISEIEDA
Sbjct: 53 MAPHGEAISRSNNFSKPPRLSSNGLQRTISDISMELGKELAITSDTKQGVLPPISEIEDA 112
Query: 61 RCECCGMCEEYTQEYIDRMRDKFLGKWICGLCAEAVEGEVEKHGGSKEAALNAHMSACVR 120
RCECCGMCEEYTQEYIDRMRDKFLGKWICGLCAEAVEGEVEKHGGSKEAALNAHMSACVR
Sbjct: 113 RCECCGMCEEYTQEYIDRMRDKFLGKWICGLCAEAVEGEVEKHGGSKEAALNAHMSACVR 172
Query: 121 FNKLGRAYPVLFQAEAMREMLKKSRMDGRGGFRAKSLSPRDKAAVQKKGGIARSSSCIPA 180
FNKLGRAYPVLFQAEAMREMLKKSRMDGR GFRAKSLSPRDKAAVQKKGGI RSSSCIPA
Sbjct: 173 FNKLGRAYPVLFQAEAMREMLKKSRMDGRDGFRAKSLSPRDKAAVQKKGGIGRSSSCIPA 232
Query: 181 ITRSEDINNLKLQN 195
I RSED+NNLKLQN
Sbjct: 233 IIRSEDLNNLKLQN 246
BLAST of Lag0003039 vs. NCBI nr
Match: KAA0051038.1 (uncharacterized protein E6C27_scaffold481G00160 [Cucumis melo var. makuwa] >TYK03833.1 uncharacterized protein E5676_scaffold347G00250 [Cucumis melo var. makuwa]) HSP 1 Score: 373.2 bits (957), Expect = 1.3e-99 Identity = 186/194 (95.88%), Postives = 187/194 (96.39%), Query Frame = 0
Query: 1 MAPHGEAISRSNNFSKPPRLSSNALQRTISDISMELGKELAITSDTKQGALPPISEIEDA 60
MAPHGEAISRSNNFSKPPRLSS LQRTISDISMELGKELAI SDTKQGALPPISEIEDA
Sbjct: 1 MAPHGEAISRSNNFSKPPRLSSTGLQRTISDISMELGKELAIASDTKQGALPPISEIEDA 60
Query: 61 RCECCGMCEEYTQEYIDRMRDKFLGKWICGLCAEAVEGEVEKHGGSKEAALNAHMSACVR 120
RCECCGMCEEYTQEYIDRMRDKFLGKWICGLCAEAVEGEVEKHGGSKE ALNAHMSACVR
Sbjct: 61 RCECCGMCEEYTQEYIDRMRDKFLGKWICGLCAEAVEGEVEKHGGSKEEALNAHMSACVR 120
Query: 121 FNKLGRAYPVLFQAEAMREMLKKSRMDGRGGFRAKSLSPRDKAAVQKKGGIARSSSCIPA 180
FNKLGRAYPVLFQAEAMREMLKKSRMDGR G RAKSLSPRDKAAVQKKGGIARSSSCIPA
Sbjct: 121 FNKLGRAYPVLFQAEAMREMLKKSRMDGRDGIRAKSLSPRDKAAVQKKGGIARSSSCIPA 180
Query: 181 ITRSEDINNLKLQN 195
I RSED+NNLKLQN
Sbjct: 181 IIRSEDLNNLKLQN 194
BLAST of Lag0003039 vs. NCBI nr
Match: XP_008462438.1 (PREDICTED: uncharacterized protein LOC103500786 [Cucumis melo]) HSP 1 Score: 371.3 bits (952), Expect = 5.0e-99 Identity = 185/194 (95.36%), Postives = 186/194 (95.88%), Query Frame = 0
Query: 1 MAPHGEAISRSNNFSKPPRLSSNALQRTISDISMELGKELAITSDTKQGALPPISEIEDA 60
MAPHGEAISRSNNFSKPPRLSS LQRTISDISMELGKELA SDTKQGALPPISEIEDA
Sbjct: 1 MAPHGEAISRSNNFSKPPRLSSTGLQRTISDISMELGKELATASDTKQGALPPISEIEDA 60
Query: 61 RCECCGMCEEYTQEYIDRMRDKFLGKWICGLCAEAVEGEVEKHGGSKEAALNAHMSACVR 120
RCECCGMCEEYTQEYIDRMRDKFLGKWICGLCAEAVEGEVEKHGGSKE ALNAHMSACVR
Sbjct: 61 RCECCGMCEEYTQEYIDRMRDKFLGKWICGLCAEAVEGEVEKHGGSKEEALNAHMSACVR 120
Query: 121 FNKLGRAYPVLFQAEAMREMLKKSRMDGRGGFRAKSLSPRDKAAVQKKGGIARSSSCIPA 180
FNKLGRAYPVLFQAEAMREMLKKSRMDGR G RAKSLSPRDKAAVQKKGGIARSSSCIPA
Sbjct: 121 FNKLGRAYPVLFQAEAMREMLKKSRMDGRDGIRAKSLSPRDKAAVQKKGGIARSSSCIPA 180
Query: 181 ITRSEDINNLKLQN 195
I RSED+NNLKLQN
Sbjct: 181 IIRSEDLNNLKLQN 194
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038898439.1 | 1.4e-101 | 97.42 | uncharacterized protein LOC120086077 [Benincasa hispida] | [more] |
| XP_011659684.1 | 3.2e-101 | 96.91 | uncharacterized protein LOC105436220 [Cucumis sativus] | [more] |
| KAE8646534.1 | 3.2e-101 | 96.91 | hypothetical protein Csa_016674 [Cucumis sativus] | [more] |
| KAA0051038.1 | 1.3e-99 | 95.88 | uncharacterized protein E6C27_scaffold481G00160 [Cucumis melo var. makuwa] >TYK0... | [more] |
| XP_008462438.1 | 5.0e-99 | 95.36 | PREDICTED: uncharacterized protein LOC103500786 [Cucumis melo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR012876 | Protein of unknown function DUF1677, plant | PFAM | PF07911 | DUF1677 | coord: 57..143
e-value: 6.3E-32
score: 109.8 |
| IPR012876 | Protein of unknown function DUF1677, plant | PANTHER | PTHR33108 | OS01G0745000 PROTEIN | coord: 5..190 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..22 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 8..22 |
| None | No IPR available | PANTHER | PTHR33108:SF68 | CASP-LIKE PROTEIN (DUF1677) | coord: 5..190 |
Relationships
The following mRNA feature(s) are a part of this gene:
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