Lag0002963 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGCAAGAAGTTGTGGTGTTTTGGTTGGTTTTGATGTTGGTTAATATTGCAGGCAGAGGCAGGTGCTCAGCCAAATCCTTTGGGAATTGCTTTTCCTCATGTAACGATCTCTGCCTTGTCAAGTTTTCAAAAGAAGCAGACCTACTGTGCGCTACAAAGTGCGCGGCGCAATGCGTCTTTTCCAATTCCATGGCCTCTGCATCCTCCACAATGGGCTTGAACCAACCAGACACTACTCGTACTTACTTCTGCAAGCTTGGTTGTGTAACCTCTCGATGCGCCAAGCTCAGCACCAAGGAAAACCCAGGTATCATAATGTTTCATTTTTGTTTTCATTCTAACATTTTTCTGAATAATTCTTCTCTTTTTCGTTCCACGATGATGATAATAAGGGTCGAGTAAAGGATGTGAAAAGGAGACTAAGTAA ATGAAGAAGCAAGAAGTTGTGGTGTTTTGGTTGGTTTTGATGTTGGTTAATATTGCAGGCAGAGGCAGGTGCTCAGCCAAATCCTTTGGGAATTGCTTTTCCTCATGTAACGATCTCTGCCTTGTCAAGTTTTCAAAAGAAGCAGACCTACTGTGCGCTACAAAGTGCGCGGCGCAATGCGTCTTTTCCAATTCCATGGCCTCTGCATCCTCCACAATGGGCTTGAACCAACCAGACACTACTCGTACTTACTTCTGCAAGCTTGGTTGTGTAACCTCTCGATGCGCCAAGCTCAGCACCAAGGAAAACCCAGGGTCGAGTAAAGGATGTGAAAAGGAGACTAAGTAA ATGAAGAAGCAAGAAGTTGTGGTGTTTTGGTTGGTTTTGATGTTGGTTAATATTGCAGGCAGAGGCAGGTGCTCAGCCAAATCCTTTGGGAATTGCTTTTCCTCATGTAACGATCTCTGCCTTGTCAAGTTTTCAAAAGAAGCAGACCTACTGTGCGCTACAAAGTGCGCGGCGCAATGCGTCTTTTCCAATTCCATGGCCTCTGCATCCTCCACAATGGGCTTGAACCAACCAGACACTACTCGTACTTACTTCTGCAAGCTTGGTTGTGTAACCTCTCGATGCGCCAAGCTCAGCACCAAGGAAAACCCAGGGTCGAGTAAAGGATGTGAAAAGGAGACTAAGTAA MKKQEVVVFWLVLMLVNIAGRGRCSAKSFGNCFSSCNDLCLVKFSKEADLLCATKCAAQCVFSNSMASASSTMGLNQPDTTRTYFCKLGCVTSRCAKLSTKENPGSSKGCEKETK Homology
BLAST of Lag0002963 vs. NCBI nr
Match: XP_022151472.1 (thionin-like protein 2 [Momordica charantia]) HSP 1 Score: 68.6 bits (166), Expect = 4.1e-08 Identity = 45/108 (41.67%), Postives = 58/108 (53.70%), Query Frame = 0
BLAST of Lag0002963 vs. NCBI nr
Match: XP_019249054.1 (PREDICTED: thionin-like protein 2 [Nicotiana attenuata] >OIT02746.1 hypothetical protein A4A49_33068 [Nicotiana attenuata]) HSP 1 Score: 67.0 bits (162), Expect = 1.2e-07 Identity = 40/113 (35.40%), Postives = 60/113 (53.10%), Query Frame = 0
BLAST of Lag0002963 vs. NCBI nr
Match: XP_016480898.1 (PREDICTED: thionin-like protein 2 isoform X2 [Nicotiana tabacum]) HSP 1 Score: 65.9 bits (159), Expect = 2.7e-07 Identity = 38/106 (35.85%), Postives = 57/106 (53.77%), Query Frame = 0
BLAST of Lag0002963 vs. NCBI nr
Match: XP_016480897.1 (PREDICTED: thionin-like protein 2 isoform X1 [Nicotiana tabacum]) HSP 1 Score: 64.3 bits (155), Expect = 7.8e-07 Identity = 37/102 (36.27%), Postives = 56/102 (54.90%), Query Frame = 0
BLAST of Lag0002963 vs. NCBI nr
Match: XP_009794068.1 (PREDICTED: thionin-like protein 2 [Nicotiana sylvestris] >XP_016489072.1 PREDICTED: thionin-like protein 2 [Nicotiana tabacum]) HSP 1 Score: 63.9 bits (154), Expect = 1.0e-06 Identity = 35/107 (32.71%), Postives = 56/107 (52.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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