Lag0002945 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0002945
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	molybdate transporter 2
Location	chr4: 46853517 .. 46853843 (+)
RNA-Seq Expression	Lag0002945
Synteny	Lag0002945

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTACCCGAAAACTTCCATCCTCGCAGAGATATCGGGTGCCGTCGGCGACCTCGACACTTACATTCCCATCGTTCTCACTCTCACTCTAGTCTCCCATCTCGACCTCGGAACCACCCTAATCTTCACCGCTCTTAACAACATCGTCACCTGCCTCCTCTTCGGCATTCTGATGCCGGTTCAGCCGATGAAATCCATCGCTGAGTCTACTCATCTCACTCTCCCTCAAATCGCCGCCGCCGGCCTCTCCACCGCCGCCATCCTCCTAATCCTCGGTGATGCGCAATTTGCTAACCGCAAGTGTACGGGTCAAGCTATAATATAG

mRNA sequence

ATGCTCTACCCGAAAACTTCCATCCTCGCAGAGATATCGGGTGCCGTCGGCGACCTCGACACTTACATTCCCATCGTTCTCACTCTCACTCTAGTCTCCCATCTCGACCTCGGAACCACCCTAATCTTCACCGCTCTTAACAACATCGTCACCTGCCTCCTCTTCGGCATTCTGATGCCGGTTCAGCCGATGAAATCCATCGCTGAGTCTACTCATCTCACTCTCCCTCAAATCGCCGCCGCCGGCCTCTCCACCGCCGCCATCCTCCTAATCCTCGGTGATGCGCAATTTGCTAACCGCAAGTGTACGGGTCAAGCTATAATATAG

Coding sequence (CDS)

ATGCTCTACCCGAAAACTTCCATCCTCGCAGAGATATCGGGTGCCGTCGGCGACCTCGACACTTACATTCCCATCGTTCTCACTCTCACTCTAGTCTCCCATCTCGACCTCGGAACCACCCTAATCTTCACCGCTCTTAACAACATCGTCACCTGCCTCCTCTTCGGCATTCTGATGCCGGTTCAGCCGATGAAATCCATCGCTGAGTCTACTCATCTCACTCTCCCTCAAATCGCCGCCGCCGGCCTCTCCACCGCCGCCATCCTCCTAATCCTCGGTGATGCGCAATTTGCTAACCGCAAGTGTACGGGTCAAGCTATAATATAG

Protein sequence

MLYPKTSILAEISGAVGDLDTYIPIVLTLTLVSHLDLGTTLIFTALNNIVTCLLFGILMPVQPMKSIAESTHLTLPQIAAAGLSTAAILLILGDAQFANRKCTGQAII

Homology

[Close]

BLAST of Lag0002945 vs. NCBI nr
Match: XP_038899916.1 (molybdate transporter 2 [Benincasa hispida])

HSP 1 Score: 144.1 bits (362), Expect = 7.3e-31
Identity = 84/97 (86.60%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 2   LYPKTSILAEISGAVGDLDTYIPIVLTLTLVSHLDLGTTLIFTALNNIVTCLLFGILMPV 61
           L PKTS+LAEISGAVGDL TYIPIVLTLTLVSHLDLG TLIFTAL NIVT LLFGI MPV
Sbjct: 23  LIPKTSVLAEISGAVGDLGTYIPIVLTLTLVSHLDLGVTLIFTALYNIVTGLLFGIPMPV 82

Query: 62  QPMKSI-----AESTHLTLPQIAAAGLSTAAILLILG 94
           QPMKSI     AESTHLTLPQIAAAGLSTAA+LLILG
Sbjct: 83  QPMKSIAAVAVAESTHLTLPQIAAAGLSTAAVLLILG 119

[Close]

BLAST of Lag0002945 vs. NCBI nr
Match: XP_022991700.1 (molybdate transporter 2 [Cucurbita maxima])

HSP 1 Score: 143.7 bits (361), Expect = 9.5e-31
Identity = 84/97 (86.60%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 2   LYPKTSILAEISGAVGDLDTYIPIVLTLTLVSHLDLGTTLIFTALNNIVTCLLFGILMPV 61
           L PK S+LAEISGAVGDL TYIPIVLTLTLVSHLDLGTTLIFTAL NIVT LLFGI MPV
Sbjct: 23  LSPKNSVLAEISGAVGDLGTYIPIVLTLTLVSHLDLGTTLIFTALYNIVTGLLFGIPMPV 82

Query: 62  QPMKSI-----AESTHLTLPQIAAAGLSTAAILLILG 94
           QPMKSI     AESTHLTLPQIAAAGLSTAA+LLILG
Sbjct: 83  QPMKSIAAVAVAESTHLTLPQIAAAGLSTAAVLLILG 119

[Close]

BLAST of Lag0002945 vs. NCBI nr
Match: XP_023549237.1 (molybdate transporter 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 143.7 bits (361), Expect = 9.5e-31
Identity = 84/97 (86.60%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 2   LYPKTSILAEISGAVGDLDTYIPIVLTLTLVSHLDLGTTLIFTALNNIVTCLLFGILMPV 61
           L PK S+LAEISGAVGDL TYIPIVLTLTLVSHLDLGTTLIFTAL NIVT LLFGI MPV
Sbjct: 23  LSPKNSVLAEISGAVGDLGTYIPIVLTLTLVSHLDLGTTLIFTALYNIVTGLLFGIPMPV 82

Query: 62  QPMKSI-----AESTHLTLPQIAAAGLSTAAILLILG 94
           QPMKSI     AESTHLTLPQIAAAGLSTAA+LLILG
Sbjct: 83  QPMKSIAAVAVAESTHLTLPQIAAAGLSTAAVLLILG 119

[Close]

BLAST of Lag0002945 vs. NCBI nr
Match: KAG7014113.1 (Molybdate transporter 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 143.7 bits (361), Expect = 9.5e-31
Identity = 84/97 (86.60%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 2   LYPKTSILAEISGAVGDLDTYIPIVLTLTLVSHLDLGTTLIFTALNNIVTCLLFGILMPV 61
           L PK S+LAEISGAVGDL TYIPIVLTLTLVSHLDLGTTLIFTAL NIVT LLFGI MPV
Sbjct: 23  LSPKNSVLAEISGAVGDLGTYIPIVLTLTLVSHLDLGTTLIFTALYNIVTGLLFGIPMPV 82

Query: 62  QPMKSI-----AESTHLTLPQIAAAGLSTAAILLILG 94
           QPMKSI     AESTHLTLPQIAAAGLSTAA+LLILG
Sbjct: 83  QPMKSIAAVAVAESTHLTLPQIAAAGLSTAAVLLILG 119

[Close]

BLAST of Lag0002945 vs. NCBI nr
Match: XP_022953229.1 (molybdate transporter 2 [Cucurbita moschata])

HSP 1 Score: 143.7 bits (361), Expect = 9.5e-31
Identity = 84/97 (86.60%), Postives = 86/97 (88.66%), Query Frame = 0


Query: 2   LYPKTSILAEISGAVGDLDTYIPIVLTLTLVSHLDLGTTLIFTALNNIVTCLLFGILMPV 61
           L PK S+LAEISGAVGDL TYIPIVLTLTLVSHLDLGTTLIFTAL NIVT LLFGI MPV
Sbjct: 23  LSPKNSVLAEISGAVGDLGTYIPIVLTLTLVSHLDLGTTLIFTALYNIVTGLLFGIPMPV 82

Query: 62  QPMKSI-----AESTHLTLPQIAAAGLSTAAILLILG 94
           QPMKSI     AESTHLTLPQIAAAGLSTAA+LLILG
Sbjct: 83  QPMKSIAAVAVAESTHLTLPQIAAAGLSTAAVLLILG 119

[Close]

BLAST of Lag0002945 vs. ExPASy Swiss-Prot
Match: Q0WP36 (Molybdate transporter 2 OS=Arabidopsis thaliana OX=3702 GN=MOT2 PE=1 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 9.9e-23
Identity = 66/94 (70.21%), Postives = 72/94 (76.60%), Query Frame = 0


Query: 5   KTSILAEISGAVGDLDTYIPIVLTLTLVSHLDLGTTLIFTALNNIVTCLLFGILMPVQPM 64
           K  + +E+SGAVGDL T+IPIVLTLTLVS+LDL TTLIFT   NI T LLF I MPVQPM
Sbjct: 26  KNPLSSELSGAVGDLGTFIPIVLTLTLVSNLDLSTTLIFTGFYNIATGLLFDIPMPVQPM 85

Query: 65  KSIA-----ESTHLTLPQIAAAGLSTAAILLILG 94
           KSIA     ES HLT  QIAAAG STAA LL+LG
Sbjct: 86  KSIAAVAVSESPHLTPSQIAAAGASTAATLLLLG 119

[Close]

BLAST of Lag0002945 vs. ExPASy Swiss-Prot
Match: Q9SL95 (Molybdate transporter 1 OS=Arabidopsis thaliana OX=3702 GN=MOT1 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-17
Identity = 53/93 (56.99%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 7   SILAEISGAVGDLDTYIPIVLTLTLVSHLDLGTTLIFTALNNIVTCLLFGILMPVQPMKS 66
           S LAEI+GA+GDL TYIPIVL LTL   LDLGTTLIFT + N +T  ++G+ MPVQPMKS
Sbjct: 33  SKLAEINGAMGDLGTYIPIVLALTLAKDLDLGTTLIFTGIYNAITGAVYGVPMPVQPMKS 92

Query: 67  IA------ESTHLTLPQIAAAGLSTAAILLILG 94
           IA       +    +P+I AAG+ T  IL +LG
Sbjct: 93  IAAVAISSTAEDFGIPEIMAAGICTGGILFVLG 125

[Close]

BLAST of Lag0002945 vs. ExPASy Swiss-Prot
Match: A6YCJ2 (Molybdate transporter 1 OS=Chlamydomonas reinhardtii OX=3055 GN=MOT1 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.3e-10
Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 0


Query: 10  AEISGAVGDLDTYIPIVLTLTLVSHLDLGTTLIFTALNNIVTCLLFGILMPVQPMKSIAE 69
           +E+SG++GDL T++P+++ L    HLDLGTTL  T L NI++   F I M VQPMK+IA 
Sbjct: 24  SEVSGSLGDLGTFLPLLIGLVQKVHLDLGTTLTITGLYNIISGWQFRIPMCVQPMKTIAA 83

Query: 70  ------STHLTLPQIAAAGLSTAAILLILGDAQ 97
                 +  L LPQ+  AGL  A  + +LG +Q
Sbjct: 84  VALAGGAAGLDLPQLLHAGLFVAGCVGLLGASQ 116

The following BLAST results are available for this feature:

BLAST of Lag0002945 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899916.1	7.3e-31	86.60	molybdate transporter 2 [Benincasa hispida]	[more]
XP_022991700.1	9.5e-31	86.60	molybdate transporter 2 [Cucurbita maxima]	[more]
XP_023549237.1	9.5e-31	86.60	molybdate transporter 2 [Cucurbita pepo subsp. pepo]	[more]
KAG7014113.1	9.5e-31	86.60	Molybdate transporter 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022953229.1	9.5e-31	86.60	molybdate transporter 2 [Cucurbita moschata]	[more]

BLAST of Lag0002945 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WP36	9.9e-23	70.21	Molybdate transporter 2 OS=Arabidopsis thaliana OX=3702 GN=MOT2 PE=1 SV=2	[more]
Q9SL95	1.3e-17	56.99	Molybdate transporter 1 OS=Arabidopsis thaliana OX=3702 GN=MOT1 PE=1 SV=1	[more]
A6YCJ2	3.3e-10	45.16	Molybdate transporter 1 OS=Chlamydomonas reinhardtii OX=3055 GN=MOT1 PE=1 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031563	Molybdate transporter 1/2	PFAM	PF16983	MFS_MOT1	coord: 10..93 e-value: 3.8E-13 score: 49.8
IPR031563	Molybdate transporter 1/2	PANTHER	PTHR31970	FAMILY NOT NAMED	coord: 5..94
None	No IPR available	PANTHER	PTHR31970:SF9	MOLYBDATE TRANSPORTER 2	coord: 5..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0002945.1	Lag0002945.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015689	molybdate ion transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015098	molybdate ion transmembrane transporter activity