Lag0002921 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0002921
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	MAPK kinase substrate protein At1g80180-like
Location	chr4: 46724261 .. 46724611 (-)
RNA-Seq Expression	Lag0002921
Synteny	Lag0002921

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGTTTGCAGAGATCTGTGGTGTCCTTCCGGCGGCAGGGATCTTCCGGTCTTGTCTGGGACGATAAGTTCATCTCCGAGGAGCTCAACAAGCCGCCGCAAAACGACGGAGAATCCAGCGCGCCGGAGGAGGTGACGACGGGAAGATATATTCCGCCGATCAAGACGATTTCCCGGAGCCGATCCAACCGCGCCGGAGGACGGGGGTTCCGGAGTAAAGAGACGGCAGCGCCGGCGGTGGAGCCGCCGTCTCCGAGAGTCTCTGCTTGTGGGCTCTGCAGCGCTTTCGGGAAATCCGGCGCCAAGAAACAGAGGGCGACGGCGACCGGAAAGCGCCGATCACGGTAG

mRNA sequence

ATGGCTGGTTTGCAGAGATCTGTGGTGTCCTTCCGGCGGCAGGGATCTTCCGGTCTTGTCTGGGACGATAAGTTCATCTCCGAGGAGCTCAACAAGCCGCCGCAAAACGACGGAGAATCCAGCGCGCCGGAGGAGGTGACGACGGGAAGATATATTCCGCCGATCAAGACGATTTCCCGGAGCCGATCCAACCGCGCCGGAGGACGGGGGTTCCGGAGTAAAGAGACGGCAGCGCCGGCGGTGGAGCCGCCGTCTCCGAGAGTCTCTGCTTGTGGGCTCTGCAGCGCTTTCGGGAAATCCGGCGCCAAGAAACAGAGGGCGACGGCGACCGGAAAGCGCCGATCACGGTAG

Coding sequence (CDS)

ATGGCTGGTTTGCAGAGATCTGTGGTGTCCTTCCGGCGGCAGGGATCTTCCGGTCTTGTCTGGGACGATAAGTTCATCTCCGAGGAGCTCAACAAGCCGCCGCAAAACGACGGAGAATCCAGCGCGCCGGAGGAGGTGACGACGGGAAGATATATTCCGCCGATCAAGACGATTTCCCGGAGCCGATCCAACCGCGCCGGAGGACGGGGGTTCCGGAGTAAAGAGACGGCAGCGCCGGCGGTGGAGCCGCCGTCTCCGAGAGTCTCTGCTTGTGGGCTCTGCAGCGCTTTCGGGAAATCCGGCGCCAAGAAACAGAGGGCGACGGCGACCGGAAAGCGCCGATCACGGTAG

Protein sequence

MAGLQRSVVSFRRQGSSGLVWDDKFISEELNKPPQNDGESSAPEEVTTGRYIPPIKTISRSRSNRAGGRGFRSKETAAPAVEPPSPRVSACGLCSAFGKSGAKKQRATATGKRRSR

Homology

[Close]

BLAST of Lag0002921 vs. NCBI nr
Match: XP_022991595.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita maxima])

HSP 1 Score: 192.2 bits (487), Expect = 2.5e-45
Identity = 100/116 (86.21%), Postives = 104/116 (89.66%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFISEELNKPPQNDGESSAPEEVTTGRYIPPIKTISR 60
           MAGLQRSVVSFRRQGSSG+VWDDKFISEELNK   +DGESSA  EV TGR IPPIKTI R
Sbjct: 1   MAGLQRSVVSFRRQGSSGVVWDDKFISEELNKAAPSDGESSATPEVKTGRNIPPIKTIDR 60

Query: 61  SRSNRAGGRGFRSKETAAPAVEPPSPRVSACGLCSAFGKSGAKKQRATATGKRRSR 117
           +RSNR GGRGFRSK+ AAPAVEPPSPRVSACGLCSAFGKSGAKKQRA A GKRRSR
Sbjct: 61  ARSNRGGGRGFRSKDMAAPAVEPPSPRVSACGLCSAFGKSGAKKQRAAAAGKRRSR 116

[Close]

BLAST of Lag0002921 vs. NCBI nr
Match: XP_023549291.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.5 bits (480), Expect = 1.6e-44
Identity = 101/117 (86.32%), Postives = 104/117 (88.89%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFISEELNKPPQNDGESSAPEEVTTGRYIPPIKTISR 60
           MAGLQRSVVSFRRQGSSG+VWDDKFISEELNK   NDGESSA  EV TGR IPPIKTI R
Sbjct: 1   MAGLQRSVVSFRRQGSSGVVWDDKFISEELNKAAPNDGESSATPEVKTGRNIPPIKTIDR 60

Query: 61  SRSNRAGGRGFRSKETAAPAVEPPSPRVSACGLCSAFGKSGAKKQR-ATATGKRRSR 117
           +RSNR GGRGFRSK+ AAPAVEPPSPRVSACGLCSAFGKSGAKKQR A A GKRRSR
Sbjct: 61  TRSNRGGGRGFRSKDMAAPAVEPPSPRVSACGLCSAFGKSGAKKQRAAAAAGKRRSR 117

[Close]

BLAST of Lag0002921 vs. NCBI nr
Match: KAG6575586.1 (MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186.0 bits (471), Expect = 1.8e-43
Identity = 99/117 (84.62%), Postives = 104/117 (88.89%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFISEELNKPPQNDGESSAPEEVTTGRYIPPIKTISR 60
           MAGLQRSVVSFRRQGSSG+VW+DKFISEELNK   +DGESSA  EV TGR IPPIKTI R
Sbjct: 1   MAGLQRSVVSFRRQGSSGVVWEDKFISEELNKAAPSDGESSATPEVKTGRNIPPIKTIDR 60

Query: 61  SRSNRAGGRGFRSKETAAPAVEPPSPRVSACGLCSAFGKSGAKKQR-ATATGKRRSR 117
           +RSNR GGRGFRSK+ AAPAVEPPSPRVSACGLCSAFGKSGAKKQR A A GKRRSR
Sbjct: 61  TRSNRGGGRGFRSKDMAAPAVEPPSPRVSACGLCSAFGKSGAKKQRAAAAAGKRRSR 117

[Close]

BLAST of Lag0002921 vs. NCBI nr
Match: KAG7014127.1 (MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 185.7 bits (470), Expect = 2.3e-43
Identity = 99/118 (83.90%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFISEELNKPPQNDGESSAPEEVTTGRYIPPIKTISR 60
           MAGLQRSVVSFRRQGSSG+VW+DKFISEELNK   +DGESSA  EV TGR IPPIKTI R
Sbjct: 1   MAGLQRSVVSFRRQGSSGVVWEDKFISEELNKAAPSDGESSATPEVKTGRNIPPIKTIDR 60

Query: 61  SRSNRAGGRGFRSKETAAPAVEPPSPRVSACGLCSAFGKSGAKKQR--ATATGKRRSR 117
           +RSNR GGRGFRSK+ AAPAVEPPSPRVSACGLCSAFGKSGAKKQR  A A GKRRSR
Sbjct: 61  TRSNRGGGRGFRSKDMAAPAVEPPSPRVSACGLCSAFGKSGAKKQRAAAAAAGKRRSR 118

[Close]

BLAST of Lag0002921 vs. NCBI nr
Match: XP_023000641.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita maxima])

HSP 1 Score: 177.6 bits (449), Expect = 6.4e-41
Identity = 93/117 (79.49%), Postives = 100/117 (85.47%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFISEELNKPPQNDGESS-APEEVTTGRYIPPIKTIS 60
           MAGLQRSVVSFRRQGSSGL+WDDKFISEEL K PQND ESS A EE+ TGR IPPIKT+ 
Sbjct: 1   MAGLQRSVVSFRRQGSSGLIWDDKFISEELIKAPQNDAESSTAAEELNTGRNIPPIKTVD 60

Query: 61  RSRSNRAGGRGFRSKETAAPAVEPPSPRVSACGLCSAFGKSGAKKQRATATGKRRSR 117
           R+RSNR   RGFRSK+TAA AVEPPSPR+SACG+CSAF  SG KKQR TA GKRRSR
Sbjct: 61  RTRSNRGEARGFRSKDTAAAAVEPPSPRISACGICSAFRNSGGKKQRTTAAGKRRSR 117

[Close]

BLAST of Lag0002921 vs. ExPASy Swiss-Prot
Match: Q9SSC1 (MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g80180 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-17
Identity = 66/139 (47.48%), Postives = 83/139 (59.71%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFISEELNKPPQND--GE-----------SSAPEEVT 60
           MAGLQRS +SFRRQGSSG+VWDD+ I+ EL++   ND  GE           +S  ++ T
Sbjct: 1   MAGLQRSTISFRRQGSSGIVWDDRLIA-ELSQQAANDRKGETLQQDEQAKLITSEVQDQT 60

Query: 61  T----GRYIPPIKT---ISRSRSNRAGG-RGFRSKETAAPAVEPPSPRVSACGLCSAFGK 117
           T    G  + PI+T   + RSRSN  G  R  R+    +PAV+PPSPR+SA G CSAFGK
Sbjct: 61  TKPIAGEGLKPIRTDGGMERSRSNGGGAIRHHRNTGRVSPAVDPPSPRLSAFGCCSAFGK 120

[Close]

BLAST of Lag0002921 vs. ExPASy Swiss-Prot
Match: Q9XI29 (Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 PE=1 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-16
Identity = 64/141 (45.39%), Postives = 79/141 (56.03%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFISEELNKPPQND-------GESSAPEEVTTGRYIP 60
           M GLQRS +SFRRQGSSG+V+DD+ I+ ELNK   N+        E   P   ++ +  P
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDRLIA-ELNKSGNNEQKDESQRDEQPKPMSESSEQVKP 60

Query: 61  --------PIKT-------ISRSRSNRAGG-RGFRSKETAAPAVEPPSPRVSACGLCSAF 117
                   PIKT       I RSRSN  G  R  R+    +PAV+PPSPR+S+CG CSAF
Sbjct: 61  IDEKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAVDPPSPRISSCGCCSAF 120

The following BLAST results are available for this feature:

BLAST of Lag0002921 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991595.1	2.5e-45	86.21	MAPK kinase substrate protein At1g80180-like [Cucurbita maxima]	[more]
XP_023549291.1	1.6e-44	86.32	MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo]	[more]
KAG6575586.1	1.8e-43	84.62	MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7014127.1	2.3e-43	83.90	MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_023000641.1	6.4e-41	79.49	MAPK kinase substrate protein At1g80180-like [Cucurbita maxima]	[more]

BLAST of Lag0002921 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSC1	2.3e-17	47.48	MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g8...	[more]
Q9XI29	2.5e-16	45.39	Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 P...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031421	Protein of unknown function DUF4666	PFAM	PF15697	DUF4666	coord: 1..105 e-value: 2.8E-31 score: 108.5
IPR031421	Protein of unknown function DUF4666	PANTHER	PTHR33730	OS05G0542732 PROTEIN-RELATED	coord: 1..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..87
None	No IPR available	PANTHER	PTHR33730:SF4	OS05G0542732 PROTEIN	coord: 1..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0002921.1	Lag0002921.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity