Lag0002862 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0002862
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	photosynthetic NDH subunit of subcomplex B 1, chloroplastic
Location	chr4: 46308625 .. 46311324 (-)
RNA-Seq Expression	Lag0002862
Synteny	Lag0002862

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTTCTTCTCTACCCACCAAATCCCTCCCGCCATTTTTGCCGACCTCAAGCTCCCCACCTTCTTCTCTTTCAACCCACTTCACCAAGCCGCTCTTTCTAGCCCCACCGGACATTTCTCTCTGCACTTCCTCATCGCCCTCAAAACTTCTGATCGCCTGTTCCAAGAAGAATCCATGGTTCGACCCTTTCGACGATGGCGACGATCCGGACATGGAATACGGCTCTCTCTTCGCCGACGGGAAGCAGGAAGAGGATCCTCGCCCACCGGACAATCCTAACAATCCTTATGGGTTCTTGAAATTTCCTCAGGGTTACATGGTGGAAGTCGCTTCCCTCGGCCTCAAAGTCCGGGGAGATGTACGGCGGTGCTGCTGCGTGATCTCCGGCGGCGTCTATGAGAACCTCCTCTTCTTTCCGGCGATTCAATTGCTCAAGGATCGGTACCCGGGTGTTCAAATCGATGTGGTGGCTTCGGCGAGGGGCAAACAGACTTATGAATTGAACAAGAATGTGAGATGGTCTAATGTCTATGATCCGGATGATTATTTTCCTGAACCAGCGGAGTATACTGACATGGTTGGATTGCTCAAGGTTGGTTCATCTTCTCTGCAACAATTGGCCTTGGCTAGTGATTCTATACTATTGGATGTATGAAATAATTCAAATATTTCAAACAATCGTTGTCAGGGATAAACAGAATTTGAACTTCCATCGAACGGTTATTTGAGCGGTCACATTGAGTAGTTTTTTGGTTTGTAGGGGTTGAGCTTTAACTTAGATGTGAGATTTCGAGAAATCGGGACTGATTTGAGTGGTGCAACTTGTTTCATTATTTGTTGCAGGGTAGGTACTATGACATGGTCTTGTCAACCAAGCTAGCAGGGCTTGGGCATGCAGTGTTTTTGTTTATGACAACAGCCAGAGACAGAGTGAGCTACATTTACCCAGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTGAAACATTTAAACCAGATAGCTCCAATCTTTCTGAGGGAGGGTTCAACATGTGAGAATATTTTATGTTTTTGTTATGAATTTGTACAAAAGATTTCATATAAGCCTTTGGAGTTTAGTGTTAGTTTGACGTATCTTGGAGTGGGAGTTAGGTTATCTGTTCAAGTTTTTAGCAATGCCATTTTTCTTTTTCAGTTTGTATTGATAGTCACTTGTTGGGTCTCGTGCTTATTTCCTAACCCGCGAGGAGGATGTCAAGAATGTATATACCATAACTTATCAAAATAAGGATTTAGGTTTAGTATATACCATAACTTTGTTTAAGTTTTTGGATTTAGCAGTAGTTTGCTGTTTTAAATTTAGAAGAATTAGATTATTTTTTATAGTTAACTCAAAATGTCAAATCCTATATGATCTGGGGAGCAAGTGTTGTCACAAAGTGAGTGATATATGGCTTTTATCAGAATAACATATGTGAAAATTGAAGAACTAAAGAGAAATAGCTAGCTCAAACTTCTACTTTTTTGATGCCTTGAATTGAAGGCTGATTTTCATGATTTAGGTATCATCAAATGGTTGATTGGTTAGGGAGACCCTTTCGCAGCGTTCCTAGGCAGCCCGTTCCTCCGCTCAAAGTTTCGATTTCGAGAAAATTGAAGGAGGTTGTAGAGGAGAAGTATAAGAAAGCAGGTGCTGAGAAAGGAAAATATATTGTGATTCATGGGATAGAATCAGATTCAAAAGCCTCAATGCAGTCCAAAGGTGATACAGATAGCTTGCTGCCCATTCAAGCCTGGGCTGAAATAGCCAATGTTATAAGGTAGATATCATGTCAAATTCTTGCTTTATCAACAATAAAGGATGAGTAATAGACTAGTACAATTGGATTGAAGGTAATAAAAAGCTTCACGATACTACTTTTTCTTTCACTCCTTTCTGATGATAGTACTTATTGAATATAAAAACAGGGGATTCAAACCAGTTTTTGTCATCCCACATGAAAAAGAAAGGGAAAATGTCGAGGATGAGGTCGGAGATGATGCAAGCATCGTATTTATGACGACCCCAGGACAGGTATTTATAATGATCCATCTTTCTCTTTGAGTATCATAGAGTAAACTGTAAATGGATGAATACAAAAAAACATAATCTTAACTAAGAAAGCAAGGAATAAGAAAGCAAGGAATAATTGAAAGGGAATTTACATGATAAAAGTCAAGGACGGGTGGAGGATTTGAAACTATGACCTCTTAGTCGAGGATATATACTTTAACCAATTGAGTTATGCTTAGGTTGAGCCTAAACCATGCATTTTTAACTACAATCTGCAGCTAGCTGCTCTCATTAATGACTCAGCTGGTCTAATAGCTACCAACACTGCTGCTATCCAACTCGCCATTGCTCGTGAAAAACCGAGGTCTTGATCTGTTTCTCCTTCACATGAACTCACTAGTTGCTTACTGATCTTAAAATCTTCCATTTGCTAGTAATAAGAAAAGAACTTTTCTTGACATGTATCTACGGTGCCAATGTGTTTGCAGCATTGCATTGTTTTGCTCTGAAGAGAAAGCAAAACTATTTGTTCCCGACGCAGAAGCAAAGAGATGCATCACAGTTTCGTCAACAACAGGACAACTAATCGACATCGATATCAGCAAGGTTAAAAAGGCAATACAGAGTCTTGAAGTGCCTCTAGCCCTTGCTTTTCAGTGA

mRNA sequence

ATGGCTACTTCTTCTCTACCCACCAAATCCCTCCCGCCATTTTTGCCGACCTCAAGCTCCCCACCTTCTTCTCTTTCAACCCACTTCACCAAGCCGCTCTTTCTAGCCCCACCGGACATTTCTCTCTGCACTTCCTCATCGCCCTCAAAACTTCTGATCGCCTGTTCCAAGAAGAATCCATGGTTCGACCCTTTCGACGATGGCGACGATCCGGACATGGAATACGGCTCTCTCTTCGCCGACGGGAAGCAGGAAGAGGATCCTCGCCCACCGGACAATCCTAACAATCCTTATGGGTTCTTGAAATTTCCTCAGGGTTACATGGTGGAAGTCGCTTCCCTCGGCCTCAAAGTCCGGGGAGATGTACGGCGGTGCTGCTGCGTGATCTCCGGCGGCGTCTATGAGAACCTCCTCTTCTTTCCGGCGATTCAATTGCTCAAGGATCGGTACCCGGGTGTTCAAATCGATGTGGTGGCTTCGGCGAGGGGCAAACAGACTTATGAATTGAACAAGAATGTGAGATGGTCTAATGTCTATGATCCGGATGATTATTTTCCTGAACCAGCGGAGTATACTGACATGGTTGGATTGCTCAAGGTTGGTTCATCTTCTCTGCAACAATTGGCCTTGGCTAGTGATTCTATACTATTGGATGGTAGGTACTATGACATGGTCTTGTCAACCAAGCTAGCAGGGCTTGGGCATGCAGTGTTTTTGTTTATGACAACAGCCAGAGACAGAGTGAGCTACATTTACCCAGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTGAAACATTTAAACCAGATAGCTCCAATCTTTCTGAGGGAGGGTTCAACATGTATCATCAAATGGTTGATTGGTTAGGGAGACCCTTTCGCAGCGTTCCTAGGCAGCCCGTTCCTCCGCTCAAAGTTTCGATTTCGAGAAAATTGAAGGAGGTTGTAGAGGAGAAGTATAAGAAAGCAGGTGCTGAGAAAGGAAAATATATTGTGATTCATGGGATAGAATCAGATTCAAAAGCCTCAATGCAGTCCAAAGGTGATACAGATAGCTTGCTGCCCATTCAAGCCTGGGCTGAAATAGCCAATGTTATAAGGGGATTCAAACCAGTTTTTGTCATCCCACATGAAAAAGAAAGGGAAAATGTCGAGGATGAGGTCGGAGATGATGCAAGCATCGTATTTATGACGACCCCAGGACAGCTAGCTGCTCTCATTAATGACTCAGCTGGTCTAATAGCTACCAACACTGCTGCTATCCAACTCGCCATTGCTCGTGAAAAACCGAGCATTGCATTGTTTTGCTCTGAAGAGAAAGCAAAACTATTTGTTCCCGACGCAGAAGCAAAGAGATGCATCACAGTTTCGTCAACAACAGGACAACTAATCGACATCGATATCAGCAAGGTTAAAAAGGCAATACAGAGTCTTGAAGTGCCTCTAGCCCTTGCTTTTCAGTGA

Coding sequence (CDS)

ATGGCTACTTCTTCTCTACCCACCAAATCCCTCCCGCCATTTTTGCCGACCTCAAGCTCCCCACCTTCTTCTCTTTCAACCCACTTCACCAAGCCGCTCTTTCTAGCCCCACCGGACATTTCTCTCTGCACTTCCTCATCGCCCTCAAAACTTCTGATCGCCTGTTCCAAGAAGAATCCATGGTTCGACCCTTTCGACGATGGCGACGATCCGGACATGGAATACGGCTCTCTCTTCGCCGACGGGAAGCAGGAAGAGGATCCTCGCCCACCGGACAATCCTAACAATCCTTATGGGTTCTTGAAATTTCCTCAGGGTTACATGGTGGAAGTCGCTTCCCTCGGCCTCAAAGTCCGGGGAGATGTACGGCGGTGCTGCTGCGTGATCTCCGGCGGCGTCTATGAGAACCTCCTCTTCTTTCCGGCGATTCAATTGCTCAAGGATCGGTACCCGGGTGTTCAAATCGATGTGGTGGCTTCGGCGAGGGGCAAACAGACTTATGAATTGAACAAGAATGTGAGATGGTCTAATGTCTATGATCCGGATGATTATTTTCCTGAACCAGCGGAGTATACTGACATGGTTGGATTGCTCAAGGTTGGTTCATCTTCTCTGCAACAATTGGCCTTGGCTAGTGATTCTATACTATTGGATGGTAGGTACTATGACATGGTCTTGTCAACCAAGCTAGCAGGGCTTGGGCATGCAGTGTTTTTGTTTATGACAACAGCCAGAGACAGAGTGAGCTACATTTACCCAGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTGAAACATTTAAACCAGATAGCTCCAATCTTTCTGAGGGAGGGTTCAACATGTATCATCAAATGGTTGATTGGTTAGGGAGACCCTTTCGCAGCGTTCCTAGGCAGCCCGTTCCTCCGCTCAAAGTTTCGATTTCGAGAAAATTGAAGGAGGTTGTAGAGGAGAAGTATAAGAAAGCAGGTGCTGAGAAAGGAAAATATATTGTGATTCATGGGATAGAATCAGATTCAAAAGCCTCAATGCAGTCCAAAGGTGATACAGATAGCTTGCTGCCCATTCAAGCCTGGGCTGAAATAGCCAATGTTATAAGGGGATTCAAACCAGTTTTTGTCATCCCACATGAAAAAGAAAGGGAAAATGTCGAGGATGAGGTCGGAGATGATGCAAGCATCGTATTTATGACGACCCCAGGACAGCTAGCTGCTCTCATTAATGACTCAGCTGGTCTAATAGCTACCAACACTGCTGCTATCCAACTCGCCATTGCTCGTGAAAAACCGAGCATTGCATTGTTTTGCTCTGAAGAGAAAGCAAAACTATTTGTTCCCGACGCAGAAGCAAAGAGATGCATCACAGTTTCGTCAACAACAGGACAACTAATCGACATCGATATCAGCAAGGTTAAAAAGGCAATACAGAGTCTTGAAGTGCCTCTAGCCCTTGCTTTTCAGTGA

Protein sequence

MATSSLPTKSLPPFLPTSSSPPSSLSTHFTKPLFLAPPDISLCTSSSPSKLLIACSKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKVGSSSLQQLALASDSILLDGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPVPPLKVSISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANVIRGFKPVFVIPHEKERENVEDEVGDDASIVFMTTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTGQLIDIDISKVKKAIQSLEVPLALAFQ

Homology

[Close]

BLAST of Lag0002862 vs. NCBI nr
Match: XP_038896546.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 862.8 bits (2228), Expect = 1.4e-246
Identity = 440/489 (89.98%), Postives = 451/489 (92.23%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSLSTHFTKPLFLAPPDISLCT-SSSPSKLLIACSKKN 60
           MATSSLPTKSLPPF PTSS  PSS STHFTKPLFLAPPDISL T SSS SKLLI  SKKN
Sbjct: 1   MATSSLPTKSLPPFSPTSSFSPSSPSTHFTKPLFLAPPDISLSTSSSSSSKLLIPSSKKN 60

Query: 61  PWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKVR 120
            W DPFDDGDDP+MEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLK+R
Sbjct: 61  QWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 120

Query: 121 GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 180
           GDVRRCCCV+SGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY
Sbjct: 121 GDVRRCCCVMSGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 180

Query: 181 DPDDYFPEPAEYTDMVGLLKVGSSSLQQLALASDSILLDGRYYDMVLSTKLAGLGHAVFL 240
           DPDDYFPEPAEYTDMVGLLK                   GRYYDMVLSTKLAGLGHAVFL
Sbjct: 181 DPDDYFPEPAEYTDMVGLLK-------------------GRYYDMVLSTKLAGLGHAVFL 240

Query: 241 FMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR 300
           FMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR
Sbjct: 241 FMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR 300

Query: 301 QPVPPLKVSISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQA 360
            PVPPLKVSISRKLKEVV EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQA
Sbjct: 301 HPVPPLKVSISRKLKEVVAEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQA 360

Query: 361 WAEIANVIRGFKPVFVIPHEKERENVEDEVGDDASIVFMTTPGQLAALINDSAGLIATNT 420
           WAEIAN +RGFKPVFVIPHEKERENVE+EVGDDASIVF+TTPGQLAALINDSAG+IATNT
Sbjct: 361 WAEIANAVRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGVIATNT 420

Query: 421 AAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTGQLIDIDISKVKKAIQSL 480
           AA+QLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSS TG+L DID+  VKKAIQS 
Sbjct: 421 AAVQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSATGRLTDIDLGTVKKAIQSF 470

Query: 481 EVPLALAFQ 489
           EVPLALAFQ
Sbjct: 481 EVPLALAFQ 470

[Close]

BLAST of Lag0002862 vs. NCBI nr
Match: KAG6575629.1 (Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014183.1 Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 859.0 bits (2218), Expect = 2.0e-245
Identity = 437/490 (89.18%), Postives = 453/490 (92.45%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSLSTHFTKPLFLAPPDISLCT-SSSPSKLLI-ACSKK 60
           MATSSLPTKSLPPFLP SS PPSS STHFTKP FLAPPDISL T SSSPSKL I +C+KK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 61  NPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKV 120
           NPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLK+
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 120

Query: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180
           RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 181 YDPDDYFPEPAEYTDMVGLLKVGSSSLQQLALASDSILLDGRYYDMVLSTKLAGLGHAVF 240
           YDPDDYFPEPA+YTDMVGLLK                   GRYYDMVLSTKLAG+GHA F
Sbjct: 181 YDPDDYFPEPADYTDMVGLLK-------------------GRYYDMVLSTKLAGIGHAAF 240

Query: 241 LFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVP 300
           LFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVP
Sbjct: 241 LFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVP 300

Query: 301 RQPVPPLKVSISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQ 360
           R PVPPLKVSISRKLKE+V+EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQ
Sbjct: 301 RHPVPPLKVSISRKLKEIVKEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQ 360

Query: 361 AWAEIANVIRGFKPVFVIPHEKERENVEDEVGDDASIVFMTTPGQLAALINDSAGLIATN 420
           AWAEIAN IRGFKPVFVIPHEKERENVE+EVGD+ASIVF+TTPGQLAALINDSAG+IATN
Sbjct: 361 AWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATN 420

Query: 421 TAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTGQLIDIDISKVKKAIQS 480
           TAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCI VSSTTG+LIDID+  VK+AIQS
Sbjct: 421 TAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQS 471

Query: 481 LEVPLALAFQ 489
            EVPLALAFQ
Sbjct: 481 FEVPLALAFQ 471

[Close]

BLAST of Lag0002862 vs. NCBI nr
Match: XP_022953552.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 855.9 bits (2210), Expect = 1.7e-244
Identity = 435/490 (88.78%), Postives = 452/490 (92.24%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSLSTHFTKPLFLAPPDISLCT-SSSPSKLLI-ACSKK 60
           MATSSLPTKSLPPFLP SS PPSS STHFTKP FLAPPDISL T SSSPSKL I +C+KK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 61  NPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKV 120
           NPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLK+
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 120

Query: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180
           RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 181 YDPDDYFPEPAEYTDMVGLLKVGSSSLQQLALASDSILLDGRYYDMVLSTKLAGLGHAVF 240
           YDPDDYFPEPA+YTDMVGLLK                   GRYYDMVLSTKLAG+GHA F
Sbjct: 181 YDPDDYFPEPADYTDMVGLLK-------------------GRYYDMVLSTKLAGIGHAAF 240

Query: 241 LFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVP 300
           LFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVP
Sbjct: 241 LFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVP 300

Query: 301 RQPVPPLKVSISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQ 360
           R PVPPLKVSISRKLKE+V+EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQ
Sbjct: 301 RHPVPPLKVSISRKLKEIVKEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQ 360

Query: 361 AWAEIANVIRGFKPVFVIPHEKERENVEDEVGDDASIVFMTTPGQLAALINDSAGLIATN 420
           AWAEIAN IRGFKPVFVIPHEKERENVE+EVGD+ASIVF+TTPGQLAALINDSAG+IATN
Sbjct: 361 AWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATN 420

Query: 421 TAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTGQLIDIDISKVKKAIQS 480
           TAAIQLAIAREKPSIALFCSEEKAKLFVPD+EAKRCI VSS TG+LIDID+  VK+AIQS
Sbjct: 421 TAAIQLAIAREKPSIALFCSEEKAKLFVPDSEAKRCIAVSSATGRLIDIDMGTVKRAIQS 471

Query: 481 LEVPLALAFQ 489
            EVPLALAFQ
Sbjct: 481 FEVPLALAFQ 471

[Close]

BLAST of Lag0002862 vs. NCBI nr
Match: XP_022145001.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Momordica charantia])

HSP 1 Score: 853.6 bits (2204), Expect = 8.4e-244
Identity = 434/488 (88.93%), Postives = 450/488 (92.21%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSLSTHFTKPLFLAPPDIS-LCTSSSPSKLLIACSKKN 60
           MATSSLPTKSLPPFLP+S+SPPSS STHFTKPLFLAPPDIS L T+ SP K  I  +KKN
Sbjct: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKN 62

Query: 61  PWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKVR 120
           PWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLK+R
Sbjct: 63  PWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 122

Query: 121 GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 180
           GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY
Sbjct: 123 GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 182

Query: 181 DPDDYFPEPAEYTDMVGLLKVGSSSLQQLALASDSILLDGRYYDMVLSTKLAGLGHAVFL 240
           DPDDYFPEPAEYTDMVGLLK                    RYYDMVLSTKLAG+GHAVFL
Sbjct: 183 DPDDYFPEPAEYTDMVGLLK-------------------SRYYDMVLSTKLAGVGHAVFL 242

Query: 241 FMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR 300
           FMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR
Sbjct: 243 FMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR 302

Query: 301 QPVPPLKVSISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQA 360
            PVPPLKV ISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQA
Sbjct: 303 HPVPPLKVLISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQA 362

Query: 361 WAEIANVIRGFKPVFVIPHEKERENVEDEVGDDASIVFMTTPGQLAALINDSAGLIATNT 420
           WAEIA+ IRGFKPVFVIPHEKERENVE+EVGDDA I+F+TTPGQLAALINDSAGLIATNT
Sbjct: 363 WAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNT 422

Query: 421 AAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTGQLIDIDISKVKKAIQSL 480
           AAIQLAIAREKPSIALF S+EKAKLFVPDAE+KRCITVSS TG+LIDID+  VK+AIQS 
Sbjct: 423 AAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSF 471

Query: 481 EVPLALAF 488
           EVPLALAF
Sbjct: 483 EVPLALAF 471

[Close]

BLAST of Lag0002862 vs. NCBI nr
Match: KAA0058709.1 (photosynthetic NDH subunit of subcomplex B 1 [Cucumis melo var. makuwa] >TYK10515.1 photosynthetic NDH subunit of subcomplex B 1 [Cucumis melo var. makuwa])

HSP 1 Score: 853.6 bits (2204), Expect = 8.4e-244
Identity = 432/488 (88.52%), Postives = 452/488 (92.62%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSLSTHFTKPLFLAPPDISLCTSSSPSKLLIACSKKNP 60
           MATSSLPTKSLPPFLPTSS PPSS STHFTKPLFL+P  ISL TS   SKL I CSKKNP
Sbjct: 1   MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPLFLSPLLISLSTS---SKLRIPCSKKNP 60

Query: 61  WFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKVRG 120
           WFDPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLK+RG
Sbjct: 61  WFDPFDDGEDPEMEYGSLFSDGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLRG 120

Query: 121 DVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYD 180
           DVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYD
Sbjct: 121 DVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYD 180

Query: 181 PDDYFPEPAEYTDMVGLLKVGSSSLQQLALASDSILLDGRYYDMVLSTKLAGLGHAVFLF 240
           PDDYFPEPAEYTDMVG+LK                   GRYYDMVLSTKLAG+GHAVFLF
Sbjct: 181 PDDYFPEPAEYTDMVGVLK-------------------GRYYDMVLSTKLAGIGHAVFLF 240

Query: 241 MTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQ 300
           MTTARDRVSYIYPDVNAAGAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPR 
Sbjct: 241 MTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRH 300

Query: 301 PVPPLKVSISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAW 360
           PVPPLKVSI+RKLKEV+ EKYKKAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AW
Sbjct: 301 PVPPLKVSIARKLKEVIAEKYKKAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAW 360

Query: 361 AEIANVIRGFKPVFVIPHEKERENVEDEVGDDASIVFMTTPGQLAALINDSAGLIATNTA 420
           AEIAN IRGFKPVFVIPHEKERENVE+EVG++ASIVF+TTPGQLAALINDSAGLIATNTA
Sbjct: 361 AEIANCIRGFKPVFVIPHEKERENVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTA 420

Query: 421 AIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTGQLIDIDISKVKKAIQSLE 480
           A+QLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTG+LIDID+  +KKAIQS E
Sbjct: 421 AVQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTGRLIDIDMGTIKKAIQSFE 466

Query: 481 VPLALAFQ 489
           VPLALAFQ
Sbjct: 481 VPLALAFQ 466

[Close]

BLAST of Lag0002862 vs. ExPASy Swiss-Prot
Match: Q9S9N6 (Photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSB1 PE=2 SV=1)

HSP 1 Score: 647.9 bits (1670), Expect = 9.2e-185
Identity = 340/484 (70.25%), Postives = 383/484 (79.13%), Query Frame = 0


Query: 4   SSLPTKSLP-PFLPTSSSPPSSLSTHFTKPLFLAPPDISLCTSSSPSKLLIACSKKNPWF 63
           SSLP   LP P  P   +PP S S    KPL        L + SS   + +   K NPW 
Sbjct: 3   SSLPL--LPKPISPFFKTPPFSTS----KPLVFLNFQTRLTSRSSDVSVNLK-KKNNPWL 62

Query: 64  DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKVRGDV 123
           DPFD G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFLKFP+GY VE+ASL LK+RGDV
Sbjct: 63  DPFDSGEDPDNEYGSLFADGKQDEDPRPPDNPDNPYGFLKFPKGYTVELASLPLKIRGDV 122

Query: 124 RRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPD 183
           RRCCCVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDPD
Sbjct: 123 RRCCCVISGGVYENLLFFPTIQLIKDRYPGVQVDILTTERGKQTYELNKNVRWANVYDPD 182

Query: 184 DYFPEPAEYTDMVGLLKVGSSSLQQLALASDSILLDGRYYDMVLSTKLAGLGHAVFLFMT 243
           D++PEPAEYTDM+GLLK                   GRYYDMVLSTKLAGLGHA FLFMT
Sbjct: 183 DHWPEPAEYTDMIGLLK-------------------GRYYDMVLSTKLAGLGHAAFLFMT 242

Query: 244 TARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPV 303
           TARDRVSYIYP+VN+AGAGL LSETF  +++NLSE G++MY QM DWLGRPFRSVPR P+
Sbjct: 243 TARDRVSYIYPNVNSAGAGLMLSETFTAENTNLSELGYSMYTQMEDWLGRPFRSVPRTPL 302

Query: 304 PPLKVSISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAE 363
            PL+VSISRK+KEVV  KY+ AGA  GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+
Sbjct: 303 LPLRVSISRKVKEVVAAKYRNAGAVTGKFIVIHGIESDSKASMQSKGDADSLLSLEKWAK 362

Query: 364 IANVIRGFKPVFVIPHEKERENVEDEVGDDASIVFMTTPGQLAALINDSAGLIATNTAAI 423
           I   +RGFKPVFVIPHEKERENVED VGDD SIVF+TTPGQLAALINDSAG+IATNTAAI
Sbjct: 363 IIKGVRGFKPVFVIPHEKERENVEDFVGDDTSIVFITTPGQLAALINDSAGVIATNTAAI 422

Query: 424 QLAIAREKPSIALFCSEEKAKLFVPDAEAK-RCITVSSTTGQLIDIDISKVKKAIQSLEV 483
           QLA AR+KP I LF SEEK KLFVP AE K  C+ ++S TG+L DIDI  VK A+Q  E 
Sbjct: 423 QLANARDKPCIGLFSSEEKGKLFVPYAEEKSNCVIIASKTGKLADIDIGTVKNAMQVFEG 460

Query: 484 PLAL 486
            LAL
Sbjct: 483 SLAL 460

[Close]

BLAST of Lag0002862 vs. ExPASy TrEMBL
Match: A0A6J1GNJ2 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456057 PE=4 SV=1)

HSP 1 Score: 855.9 bits (2210), Expect = 8.2e-245
Identity = 435/490 (88.78%), Postives = 452/490 (92.24%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSLSTHFTKPLFLAPPDISLCT-SSSPSKLLI-ACSKK 60
           MATSSLPTKSLPPFLP SS PPSS STHFTKP FLAPPDISL T SSSPSKL I +C+KK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 61  NPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKV 120
           NPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLK+
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 120

Query: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180
           RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 181 YDPDDYFPEPAEYTDMVGLLKVGSSSLQQLALASDSILLDGRYYDMVLSTKLAGLGHAVF 240
           YDPDDYFPEPA+YTDMVGLLK                   GRYYDMVLSTKLAG+GHA F
Sbjct: 181 YDPDDYFPEPADYTDMVGLLK-------------------GRYYDMVLSTKLAGIGHAAF 240

Query: 241 LFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVP 300
           LFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVP
Sbjct: 241 LFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVP 300

Query: 301 RQPVPPLKVSISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQ 360
           R PVPPLKVSISRKLKE+V+EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQ
Sbjct: 301 RHPVPPLKVSISRKLKEIVKEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQ 360

Query: 361 AWAEIANVIRGFKPVFVIPHEKERENVEDEVGDDASIVFMTTPGQLAALINDSAGLIATN 420
           AWAEIAN IRGFKPVFVIPHEKERENVE+EVGD+ASIVF+TTPGQLAALINDSAG+IATN
Sbjct: 361 AWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATN 420

Query: 421 TAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTGQLIDIDISKVKKAIQS 480
           TAAIQLAIAREKPSIALFCSEEKAKLFVPD+EAKRCI VSS TG+LIDID+  VK+AIQS
Sbjct: 421 TAAIQLAIAREKPSIALFCSEEKAKLFVPDSEAKRCIAVSSATGRLIDIDMGTVKRAIQS 471

Query: 481 LEVPLALAFQ 489
            EVPLALAFQ
Sbjct: 481 FEVPLALAFQ 471

[Close]

BLAST of Lag0002862 vs. ExPASy TrEMBL
Match: A0A5A7UYW0 (Photosynthetic NDH subunit of subcomplex B 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001650 PE=4 SV=1)

HSP 1 Score: 853.6 bits (2204), Expect = 4.1e-244
Identity = 432/488 (88.52%), Postives = 452/488 (92.62%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSLSTHFTKPLFLAPPDISLCTSSSPSKLLIACSKKNP 60
           MATSSLPTKSLPPFLPTSS PPSS STHFTKPLFL+P  ISL TS   SKL I CSKKNP
Sbjct: 1   MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPLFLSPLLISLSTS---SKLRIPCSKKNP 60

Query: 61  WFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKVRG 120
           WFDPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLK+RG
Sbjct: 61  WFDPFDDGEDPEMEYGSLFSDGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLRG 120

Query: 121 DVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYD 180
           DVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYD
Sbjct: 121 DVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYD 180

Query: 181 PDDYFPEPAEYTDMVGLLKVGSSSLQQLALASDSILLDGRYYDMVLSTKLAGLGHAVFLF 240
           PDDYFPEPAEYTDMVG+LK                   GRYYDMVLSTKLAG+GHAVFLF
Sbjct: 181 PDDYFPEPAEYTDMVGVLK-------------------GRYYDMVLSTKLAGIGHAVFLF 240

Query: 241 MTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQ 300
           MTTARDRVSYIYPDVNAAGAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPR 
Sbjct: 241 MTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRH 300

Query: 301 PVPPLKVSISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAW 360
           PVPPLKVSI+RKLKEV+ EKYKKAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AW
Sbjct: 301 PVPPLKVSIARKLKEVIAEKYKKAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAW 360

Query: 361 AEIANVIRGFKPVFVIPHEKERENVEDEVGDDASIVFMTTPGQLAALINDSAGLIATNTA 420
           AEIAN IRGFKPVFVIPHEKERENVE+EVG++ASIVF+TTPGQLAALINDSAGLIATNTA
Sbjct: 361 AEIANCIRGFKPVFVIPHEKERENVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTA 420

Query: 421 AIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTGQLIDIDISKVKKAIQSLE 480
           A+QLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTG+LIDID+  +KKAIQS E
Sbjct: 421 AVQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTGRLIDIDMGTIKKAIQSFE 466

Query: 481 VPLALAFQ 489
           VPLALAFQ
Sbjct: 481 VPLALAFQ 466

[Close]

BLAST of Lag0002862 vs. ExPASy TrEMBL
Match: A0A6J1CV27 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014527 PE=4 SV=1)

HSP 1 Score: 853.6 bits (2204), Expect = 4.1e-244
Identity = 434/488 (88.93%), Postives = 450/488 (92.21%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSLSTHFTKPLFLAPPDIS-LCTSSSPSKLLIACSKKN 60
           MATSSLPTKSLPPFLP+S+SPPSS STHFTKPLFLAPPDIS L T+ SP K  I  +KKN
Sbjct: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKN 62

Query: 61  PWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKVR 120
           PWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLK+R
Sbjct: 63  PWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 122

Query: 121 GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 180
           GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY
Sbjct: 123 GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 182

Query: 181 DPDDYFPEPAEYTDMVGLLKVGSSSLQQLALASDSILLDGRYYDMVLSTKLAGLGHAVFL 240
           DPDDYFPEPAEYTDMVGLLK                    RYYDMVLSTKLAG+GHAVFL
Sbjct: 183 DPDDYFPEPAEYTDMVGLLK-------------------SRYYDMVLSTKLAGVGHAVFL 242

Query: 241 FMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR 300
           FMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR
Sbjct: 243 FMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPR 302

Query: 301 QPVPPLKVSISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQA 360
            PVPPLKV ISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQA
Sbjct: 303 HPVPPLKVLISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQA 362

Query: 361 WAEIANVIRGFKPVFVIPHEKERENVEDEVGDDASIVFMTTPGQLAALINDSAGLIATNT 420
           WAEIA+ IRGFKPVFVIPHEKERENVE+EVGDDA I+F+TTPGQLAALINDSAGLIATNT
Sbjct: 363 WAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNT 422

Query: 421 AAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTGQLIDIDISKVKKAIQSL 480
           AAIQLAIAREKPSIALF S+EKAKLFVPDAE+KRCITVSS TG+LIDID+  VK+AIQS 
Sbjct: 423 AAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSF 471

Query: 481 EVPLALAF 488
           EVPLALAF
Sbjct: 483 EVPLALAF 471

[Close]

BLAST of Lag0002862 vs. ExPASy TrEMBL
Match: A0A6J1JXN2 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111488799 PE=4 SV=1)

HSP 1 Score: 852.0 bits (2200), Expect = 1.2e-243
Identity = 432/490 (88.16%), Postives = 450/490 (91.84%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSLSTHFTKPLFLAPPDISLCT-SSSPSKLLI-ACSKK 60
           MATSSLPTKSLPPFLP SS PPSS STHFTKP FLAPPDISL T SSSPSKL I +C+KK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 61  NPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKV 120
           NPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLK+
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 120

Query: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180
           RGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 181 YDPDDYFPEPAEYTDMVGLLKVGSSSLQQLALASDSILLDGRYYDMVLSTKLAGLGHAVF 240
           YDPDDYFPEPA+YTDMVGLLK                   GRYYDMVLSTKLAG+GHA F
Sbjct: 181 YDPDDYFPEPADYTDMVGLLK-------------------GRYYDMVLSTKLAGIGHAAF 240

Query: 241 LFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVP 300
           LFMTTARDRVSYIYPDVNAAGAGLFLS+TFKP+SSNLSEGGFNMYHQM DWLGRPFRSVP
Sbjct: 241 LFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPESSNLSEGGFNMYHQMADWLGRPFRSVP 300

Query: 301 RQPVPPLKVSISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQ 360
           R PVPPLKVSISRKLKE+V+EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQ
Sbjct: 301 RHPVPPLKVSISRKLKEIVKEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQ 360

Query: 361 AWAEIANVIRGFKPVFVIPHEKERENVEDEVGDDASIVFMTTPGQLAALINDSAGLIATN 420
           AWAEIAN IRGFKPVFVIPHEKERENVE+EVGD+ASIVF+TTPGQLAALINDSAG+IATN
Sbjct: 361 AWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATN 420

Query: 421 TAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTGQLIDIDISKVKKAIQS 480
           TAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCI VSS TG+LIDID+  VK+AIQS
Sbjct: 421 TAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSATGRLIDIDMGTVKRAIQS 471

Query: 481 LEVPLALAFQ 489
            EVPLALAFQ
Sbjct: 481 FEVPLALAFQ 471

[Close]

BLAST of Lag0002862 vs. ExPASy TrEMBL
Match: A0A1S3CEK1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499839 PE=4 SV=1)

HSP 1 Score: 850.5 bits (2196), Expect = 3.4e-243
Identity = 431/488 (88.32%), Postives = 451/488 (92.42%), Query Frame = 0


Query: 1   MATSSLPTKSLPPFLPTSSSPPSSLSTHFTKPLFLAPPDISLCTSSSPSKLLIACSKKNP 60
           MATSSLPTKSLPPFLPTSS PPSS STHFTKPLFL+P  ISL TS   SKL I CSKKNP
Sbjct: 1   MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPLFLSPLLISLSTS---SKLRIPCSKKNP 60

Query: 61  WFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKVRG 120
           WFDPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLK+RG
Sbjct: 61  WFDPFDDGEDPEMEYGSLFSDGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLRG 120

Query: 121 DVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYD 180
           DVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYD
Sbjct: 121 DVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYD 180

Query: 181 PDDYFPEPAEYTDMVGLLKVGSSSLQQLALASDSILLDGRYYDMVLSTKLAGLGHAVFLF 240
           PDDYFPEPAEYTDMVG+LK                   GRYYDMVLSTKLAG+GHAVFLF
Sbjct: 181 PDDYFPEPAEYTDMVGVLK-------------------GRYYDMVLSTKLAGIGHAVFLF 240

Query: 241 MTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQ 300
           MTTARDRVSYIYPDVNAAGAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPR 
Sbjct: 241 MTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRH 300

Query: 301 PVPPLKVSISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAW 360
           PVPPLKVSI+RKLKEV+ EKYKKAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AW
Sbjct: 301 PVPPLKVSIARKLKEVIAEKYKKAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAW 360

Query: 361 AEIANVIRGFKPVFVIPHEKERENVEDEVGDDASIVFMTTPGQLAALINDSAGLIATNTA 420
           AEIAN IRGFKPVFVIP EKERENVE+EVG++ASIVF+TTPGQLAALINDSAGLIATNTA
Sbjct: 361 AEIANCIRGFKPVFVIPREKERENVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTA 420

Query: 421 AIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTGQLIDIDISKVKKAIQSLE 480
           A+QLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTG+LIDID+  +KKAIQS E
Sbjct: 421 AVQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTGRLIDIDMGTIKKAIQSFE 466

Query: 481 VPLALAFQ 489
           VPLALAFQ
Sbjct: 481 VPLALAFQ 466

[Close]

BLAST of Lag0002862 vs. TAIR 10
Match: AT1G15980.1 (NDH-dependent cyclic electron flow 1 )

HSP 1 Score: 647.9 bits (1670), Expect = 6.5e-186
Identity = 340/484 (70.25%), Postives = 383/484 (79.13%), Query Frame = 0


Query: 4   SSLPTKSLP-PFLPTSSSPPSSLSTHFTKPLFLAPPDISLCTSSSPSKLLIACSKKNPWF 63
           SSLP   LP P  P   +PP S S    KPL        L + SS   + +   K NPW 
Sbjct: 3   SSLPL--LPKPISPFFKTPPFSTS----KPLVFLNFQTRLTSRSSDVSVNLK-KKNNPWL 62

Query: 64  DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKVRGDV 123
           DPFD G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFLKFP+GY VE+ASL LK+RGDV
Sbjct: 63  DPFDSGEDPDNEYGSLFADGKQDEDPRPPDNPDNPYGFLKFPKGYTVELASLPLKIRGDV 122

Query: 124 RRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPD 183
           RRCCCVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDPD
Sbjct: 123 RRCCCVISGGVYENLLFFPTIQLIKDRYPGVQVDILTTERGKQTYELNKNVRWANVYDPD 182

Query: 184 DYFPEPAEYTDMVGLLKVGSSSLQQLALASDSILLDGRYYDMVLSTKLAGLGHAVFLFMT 243
           D++PEPAEYTDM+GLLK                   GRYYDMVLSTKLAGLGHA FLFMT
Sbjct: 183 DHWPEPAEYTDMIGLLK-------------------GRYYDMVLSTKLAGLGHAAFLFMT 242

Query: 244 TARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRQPV 303
           TARDRVSYIYP+VN+AGAGL LSETF  +++NLSE G++MY QM DWLGRPFRSVPR P+
Sbjct: 243 TARDRVSYIYPNVNSAGAGLMLSETFTAENTNLSELGYSMYTQMEDWLGRPFRSVPRTPL 302

Query: 304 PPLKVSISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAE 363
            PL+VSISRK+KEVV  KY+ AGA  GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+
Sbjct: 303 LPLRVSISRKVKEVVAAKYRNAGAVTGKFIVIHGIESDSKASMQSKGDADSLLSLEKWAK 362

Query: 364 IANVIRGFKPVFVIPHEKERENVEDEVGDDASIVFMTTPGQLAALINDSAGLIATNTAAI 423
           I   +RGFKPVFVIPHEKERENVED VGDD SIVF+TTPGQLAALINDSAG+IATNTAAI
Sbjct: 363 IIKGVRGFKPVFVIPHEKERENVEDFVGDDTSIVFITTPGQLAALINDSAGVIATNTAAI 422

Query: 424 QLAIAREKPSIALFCSEEKAKLFVPDAEAK-RCITVSSTTGQLIDIDISKVKKAIQSLEV 483
           QLA AR+KP I LF SEEK KLFVP AE K  C+ ++S TG+L DIDI  VK A+Q  E 
Sbjct: 423 QLANARDKPCIGLFSSEEKGKLFVPYAEEKSNCVIIASKTGKLADIDIGTVKNAMQVFEG 460

Query: 484 PLAL 486
            LAL
Sbjct: 483 SLAL 460

The following BLAST results are available for this feature:

BLAST of Lag0002862 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896546.1	1.4e-246	89.98	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Benincasa hispida]	[more]
KAG6575629.1	2.0e-245	89.18	Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita ...	[more]
XP_022953552.1	1.7e-244	88.78	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita moschata]	[more]
XP_022145001.1	8.4e-244	88.93	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Momordica charantia...	[more]
KAA0058709.1	8.4e-244	88.52	photosynthetic NDH subunit of subcomplex B 1 [Cucumis melo var. makuwa] >TYK1051...	[more]

BLAST of Lag0002862 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S9N6	9.2e-185	70.25	Photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Arabidopsis thali...	[more]

BLAST of Lag0002862 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GNJ2	8.2e-245	88.78	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita moschat...	[more]
A0A5A7UYW0	4.1e-244	88.52	Photosynthetic NDH subunit of subcomplex B 1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1CV27	4.1e-244	88.93	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Momordica charant...	[more]
A0A6J1JXN2	1.2e-243	88.16	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita maxima ...	[more]
A0A1S3CEK1	3.4e-243	88.32	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucumis melo OX=3...	[more]

BLAST of Lag0002862 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15980.1	6.5e-186	70.25	NDH-dependent cyclic electron flow 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.2000	Glycogen Phosphorylase B;	coord: 135..291 e-value: 4.9E-6 score: 28.5
None	No IPR available	GENE3D	3.40.50.2000	Glycogen Phosphorylase B;	coord: 316..481 e-value: 1.0E-11 score: 46.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	SUPERFAMILY	53756	UDP-Glycosyltransferase/glycogen phosphorylase	coord: 136..479
IPR044983	Photosynthetic NDH subunit of subcomplex B 1, chloroplastic	PANTHER	PTHR37698	PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 1, CHLOROPLASTIC	coord: 1..486

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0002862.1	Lag0002862.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016757	glycosyltransferase activity