Lag0002716 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0002716
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr4: 45077562 .. 45078999 (-)
RNA-Seq Expression	Lag0002716
Synteny	Lag0002716

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCCAAAGGTGAAAATGAGATCTAGAACCAACAGAAGAAGCAGGATTTCATGGAAGAATAATTTTCATTTTCAAAACTACAAGTTGCAGAAAATGGAAATTGAGAGATCGCTGAAGGTATTCTAGAATCGTTTTTAGAATAAATTGTGGCGAAATCCTCGAACAATTCGTCTCGATCAACGTCGTCCCCAAATTTTCCGGGAAAGAGAGAGAAACTAACCTCATTTTCCTCCGTTCATCTCAACTCGCAAACGAATTTCATGCACTTGCATTGCACTCTTCCATCAAATTCAACCTACCCGATCAATCTTCAACAATTACGAGATCTATAAAACTCTGCAACTTCAGAGATTTCGCTTCATCTGATCAATTTCTTGAATTGGGATTTAACGATGACGCAAAGTTTACCCGCGCGTTTTCGAAGTCATTGTTGGTTTGAAACCGAACAAGGCAATCCAAGTGTCATATTCCCAATTTTCTAAAATTAATTTATTCTATTTCGATGTTGAAGTCATTTAAAGCCTCTTTGTTCGATATGCATTCTGTTTTATGTTCTTGTTCACTGAATTAACCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTGGCCGGTTGCAAGAGTAGCAAACCGACCCAAAATAATTATAAAAATAGCCGCCGTTGAAACTATTTGCAAAAATGGCAAAATATTGCCATCTAAAAGGTAAAATTACTAAAATGCCCTTTTGGCTTCCATTTCTTCTCTACTTTTCCGGTCATCTCCATCCTTCTTCTCCAACAATACCGTACTCCCCCAACGATCACGGGCGTCGATGTTAGCCCTGCGGCTGAGAAGGAGCTTGACAACGTCGGCATGGCCCTCGCAGGCGGCAATATGGAGAGCAGTGCGGCCGTCCAAGTCGATGTTGTTGACGTCGGTGCCGTCGTTGAGCAAGTCGTCGACGCCGCGGACGTCGCCACGGCAGGCCATGAAGAGAAGCTGCATGGTGGAGTCGAGATTCTCGGGGACGGTGAGGTCATTATCGTCGTCGGGGCAGCGGCGAATGGGGTCGAGAGAGGACTGGCGGCCAAAGCTGAAGCGGAGATTGTTCCGACGTGCGTCGAGAGAGGACTGGCGGGAGAACTGGCGGGAGAGGGTCCGACGAAGGGAACCGGTGGAGAACTGACGGGATATGCCCCGCTTGAGCTGGGTCGTGATGTTGTCCATGGATTGTGGGATTCAGGGGTCGGATCGAGAGCAGGGAAGAGGAGGGAGGGGGCTCTCGATGCCGAGAAAGGGGAAGAGATGGATGGGTGTTCTGGTTTTGGATGGGTGTTCGACCGTCTTCGTCGTCGCTCCGATCAGCTTCTTCCAGTGGCTTTTGAGTTTGTACTGACTTTTGGAGATCAATTTGTGAAATTCAGACATGGGGTTGAGAGAAAGAAAGAGAGCTGA

mRNA sequence

ATGAAGCCAAAGGTGAAAATGAGATCTAGAACCAACAGAAGAAGCAGGATTTCATGGAAGAATAATTTTCATTTTCAAAACTACAAGTTGCAGAAAATGGAAATTGAGAGATCGCTGAAGGTAAAATTACTAAAATGCCCTTTTGGCTTCCATTTCTTCTCTACTTTTCCGGTCATCTCCATCCTTCTTCTCCAACAATACCGTACTCCCCCAACGATCACGGGCGTCGATGTTAGCCCTGCGGCTGAGAAGGAGCTTGACAACGTCGGCATGGCCCTCGCAGGCGGCAATATGGAGAGCAGTGCGGCCGTCCAAGTCGATGTTGTTGACGTCGGTGCCGTCGTTGAGCAAGTCGTCGACGCCGCGGACGTCGCCACGGCAGGCCATGAAGAGAAGCTGCATGGTGGAGTCGAGATTCTCGGGGACGGTGAGGTCATTATCGTCGTCGGGGCAGCGGCGAATGGGGTCGAGAGAGGACTGGCGGCCAAAGCTGAAGCGGAGATTGTTCCGACGTGCGTCGAGAGAGGACTGGCGGGAGAACTGGCGGGAGAGGGTCCGACGAAGGGAACCGGTGGAGAACTGACGGGATATGCCCCGCTTGAGCTGGGTCGTGATGTTGTCCATGGATTGTGGGATTCAGGGGTCGGATCGAGAGCAGGGAAGAGGAGGGAGGGGGCTCTCGATGCCGAGAAAGGGGAAGAGATGGATGGGTGTTCTGGTTTTGGATGGGTGTTCGACCGTCTTCGTCGTCGCTCCGATCAGCTTCTTCCAGTGGCTTTTGAGTTTGTACTGACTTTTGGAGATCAATTTGTGAAATTCAGACATGGGGTTGAGAGAAAGAAAGAGAGCTGA

Coding sequence (CDS)

ATGAAGCCAAAGGTGAAAATGAGATCTAGAACCAACAGAAGAAGCAGGATTTCATGGAAGAATAATTTTCATTTTCAAAACTACAAGTTGCAGAAAATGGAAATTGAGAGATCGCTGAAGGTAAAATTACTAAAATGCCCTTTTGGCTTCCATTTCTTCTCTACTTTTCCGGTCATCTCCATCCTTCTTCTCCAACAATACCGTACTCCCCCAACGATCACGGGCGTCGATGTTAGCCCTGCGGCTGAGAAGGAGCTTGACAACGTCGGCATGGCCCTCGCAGGCGGCAATATGGAGAGCAGTGCGGCCGTCCAAGTCGATGTTGTTGACGTCGGTGCCGTCGTTGAGCAAGTCGTCGACGCCGCGGACGTCGCCACGGCAGGCCATGAAGAGAAGCTGCATGGTGGAGTCGAGATTCTCGGGGACGGTGAGGTCATTATCGTCGTCGGGGCAGCGGCGAATGGGGTCGAGAGAGGACTGGCGGCCAAAGCTGAAGCGGAGATTGTTCCGACGTGCGTCGAGAGAGGACTGGCGGGAGAACTGGCGGGAGAGGGTCCGACGAAGGGAACCGGTGGAGAACTGACGGGATATGCCCCGCTTGAGCTGGGTCGTGATGTTGTCCATGGATTGTGGGATTCAGGGGTCGGATCGAGAGCAGGGAAGAGGAGGGAGGGGGCTCTCGATGCCGAGAAAGGGGAAGAGATGGATGGGTGTTCTGGTTTTGGATGGGTGTTCGACCGTCTTCGTCGTCGCTCCGATCAGCTTCTTCCAGTGGCTTTTGAGTTTGTACTGACTTTTGGAGATCAATTTGTGAAATTCAGACATGGGGTTGAGAGAAAGAAAGAGAGCTGA

Protein sequence

MKPKVKMRSRTNRRSRISWKNNFHFQNYKLQKMEIERSLKVKLLKCPFGFHFFSTFPVISILLLQQYRTPPTITGVDVSPAAEKELDNVGMALAGGNMESSAAVQVDVVDVGAVVEQVVDAADVATAGHEEKLHGGVEILGDGEVIIVVGAAANGVERGLAAKAEAEIVPTCVERGLAGELAGEGPTKGTGGELTGYAPLELGRDVVHGLWDSGVGSRAGKRREGALDAEKGEEMDGCSGFGWVFDRLRRRSDQLLPVAFEFVLTFGDQFVKFRHGVERKKES

Homology

[Close]

BLAST of Lag0002716 vs. NCBI nr
Match: RWW33731.1 (hypothetical protein GW17_00001524 [Ensete ventricosum])

HSP 1 Score: 62.8 bits (151), Expect = 5.6e-06
Identity = 51/142 (35.92%), Postives = 74/142 (52.11%), Query Frame = 0


Query: 67  YRTPPTITGVDVSPAAEKELDNVGMALAGGNMESSAAVQVDVVDVGAVVEQVVDAADVAT 126
           YR  P I G+DV   A+++L +  M+L    M+   AVQ+D V V A+V +++    V  
Sbjct: 16  YRAAPPIPGIDVGSPAQQQLHDTDMSLTRRYMQRRPAVQIDAVHVDAIVHELLHPLSVPL 75

Query: 127 AGHEEKLHGGVEILGDGEVIIVVGAAAN---GVERGLAAKAE-AEIVPTCVERGLAGELA 186
           A  E++LHGGVE++   E  ++ G A      +ERGL  +A+  +I    VE  +A E  
Sbjct: 76  ARQEQQLHGGVEVIRHRE--LLPGGALGPTVRIERGLPPEAKPTDIAKPRVEGEVALEAK 135

Query: 187 GEGPTKGTGGELTGYAPLELGR 205
              P   T  EL   A LEL R
Sbjct: 136 PPAPPHRTPRELPRNAALELLR 155

[Close]

BLAST of Lag0002716 vs. NCBI nr
Match: RRT75731.1 (hypothetical protein B296_00002961 [Ensete ventricosum])

HSP 1 Score: 62.8 bits (151), Expect = 5.6e-06
Identity = 51/142 (35.92%), Postives = 74/142 (52.11%), Query Frame = 0


Query: 67  YRTPPTITGVDVSPAAEKELDNVGMALAGGNMESSAAVQVDVVDVGAVVEQVVDAADVAT 126
           YR  P I G+DV   A+++L +  M+L    M+   AVQ+D V V A+V +++    V  
Sbjct: 16  YRAAPPIPGIDVGSPAQQQLHDTDMSLTRRYMQRRPAVQIDAVHVDAIVHELLHPLSVPL 75

Query: 127 AGHEEKLHGGVEILGDGEVIIVVGAAAN---GVERGLAAKAE-AEIVPTCVERGLAGELA 186
           A  E++LHGGVE++   E  ++ G A      +ERGL  +A+  +I    VE  +A E  
Sbjct: 76  ARQEQQLHGGVEVIRHRE--LLPGGALGPTVRIERGLPPEAKPTDIAKPRVEGEVALEAK 135

Query: 187 GEGPTKGTGGELTGYAPLELGR 205
              P   T  EL   A LEL R
Sbjct: 136 PPAPPHRTPRELPRNAALELLR 155

[Close]

BLAST of Lag0002716 vs. NCBI nr
Match: RWW80907.1 (hypothetical protein BHE74_00010728 [Ensete ventricosum])

HSP 1 Score: 62.8 bits (151), Expect = 5.6e-06
Identity = 51/142 (35.92%), Postives = 74/142 (52.11%), Query Frame = 0


Query: 67  YRTPPTITGVDVSPAAEKELDNVGMALAGGNMESSAAVQVDVVDVGAVVEQVVDAADVAT 126
           YR  P I G+DV   A+++L +  M+L    M+   AVQ+D V V A+V +++    V  
Sbjct: 16  YRAAPPIPGIDVGSPAQQQLHDTDMSLTRRYMQRRPAVQIDAVHVDAIVHELLHPLSVPL 75

Query: 127 AGHEEKLHGGVEILGDGEVIIVVGAAAN---GVERGLAAKAE-AEIVPTCVERGLAGELA 186
           A  E++LHGGVE++   E  ++ G A      +ERGL  +A+  +I    VE  +A E  
Sbjct: 76  ARQEQQLHGGVEVIRHRE--LLPGGALGPTVRIERGLPPEAKPTDIAKPRVEGEVALEAK 135

Query: 187 GEGPTKGTGGELTGYAPLELGR 205
              P   T  EL   A LEL R
Sbjct: 136 PPAPPHRTPRELPRNAALELLR 155

[Close]

BLAST of Lag0002716 vs. NCBI nr
Match: RZR77451.1 (hypothetical protein BHM03_00002539 [Ensete ventricosum])

HSP 1 Score: 62.8 bits (151), Expect = 5.6e-06
Identity = 51/142 (35.92%), Postives = 74/142 (52.11%), Query Frame = 0


Query: 67  YRTPPTITGVDVSPAAEKELDNVGMALAGGNMESSAAVQVDVVDVGAVVEQVVDAADVAT 126
           YR  P I G+DV   A+++L +  M+L    M+   AVQ+D V V A+V +++    V  
Sbjct: 16  YRAAPPIPGIDVGSPAQQQLHDTDMSLTRRYMQRRPAVQIDAVHVDAIVHELLHPLSVPL 75

Query: 127 AGHEEKLHGGVEILGDGEVIIVVGAAAN---GVERGLAAKAE-AEIVPTCVERGLAGELA 186
           A  E++LHGGVE++   E  ++ G A      +ERGL  +A+  +I    VE  +A E  
Sbjct: 76  ARQEQQLHGGVEVIRHRE--LLPGGALGPTVRIERGLPPEAKPTDIAKPRVEGEVALEAK 135

Query: 187 GEGPTKGTGGELTGYAPLELGR 205
              P   T  EL   A LEL R
Sbjct: 136 PPAPPHRTPRELPRNAALELLR 155

[Close]

BLAST of Lag0002716 vs. ExPASy TrEMBL
Match: A0A427AHU6 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00002961 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.7e-06
Identity = 51/142 (35.92%), Postives = 74/142 (52.11%), Query Frame = 0


Query: 67  YRTPPTITGVDVSPAAEKELDNVGMALAGGNMESSAAVQVDVVDVGAVVEQVVDAADVAT 126
           YR  P I G+DV   A+++L +  M+L    M+   AVQ+D V V A+V +++    V  
Sbjct: 16  YRAAPPIPGIDVGSPAQQQLHDTDMSLTRRYMQRRPAVQIDAVHVDAIVHELLHPLSVPL 75

Query: 127 AGHEEKLHGGVEILGDGEVIIVVGAAAN---GVERGLAAKAE-AEIVPTCVERGLAGELA 186
           A  E++LHGGVE++   E  ++ G A      +ERGL  +A+  +I    VE  +A E  
Sbjct: 76  ARQEQQLHGGVEVIRHRE--LLPGGALGPTVRIERGLPPEAKPTDIAKPRVEGEVALEAK 135

Query: 187 GEGPTKGTGGELTGYAPLELGR 205
              P   T  EL   A LEL R
Sbjct: 136 PPAPPHRTPRELPRNAALELLR 155

[Close]

BLAST of Lag0002716 vs. ExPASy TrEMBL
Match: A0A444GG04 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00001524 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.7e-06
Identity = 51/142 (35.92%), Postives = 74/142 (52.11%), Query Frame = 0


Query: 67  YRTPPTITGVDVSPAAEKELDNVGMALAGGNMESSAAVQVDVVDVGAVVEQVVDAADVAT 126
           YR  P I G+DV   A+++L +  M+L    M+   AVQ+D V V A+V +++    V  
Sbjct: 16  YRAAPPIPGIDVGSPAQQQLHDTDMSLTRRYMQRRPAVQIDAVHVDAIVHELLHPLSVPL 75

Query: 127 AGHEEKLHGGVEILGDGEVIIVVGAAAN---GVERGLAAKAE-AEIVPTCVERGLAGELA 186
           A  E++LHGGVE++   E  ++ G A      +ERGL  +A+  +I    VE  +A E  
Sbjct: 76  ARQEQQLHGGVEVIRHRE--LLPGGALGPTVRIERGLPPEAKPTDIAKPRVEGEVALEAK 135

Query: 187 GEGPTKGTGGELTGYAPLELGR 205
              P   T  EL   A LEL R
Sbjct: 136 PPAPPHRTPRELPRNAALELLR 155

The following BLAST results are available for this feature:

BLAST of Lag0002716 vs. NCBI nr


Match Name	E-value	Identity	Description
RWW33731.1	5.6e-06	35.92	hypothetical protein GW17_00001524 [Ensete ventricosum]	[more]
RRT75731.1	5.6e-06	35.92	hypothetical protein B296_00002961 [Ensete ventricosum]	[more]
RWW80907.1	5.6e-06	35.92	hypothetical protein BHE74_00010728 [Ensete ventricosum]	[more]
RZR77451.1	5.6e-06	35.92	hypothetical protein BHM03_00002539 [Ensete ventricosum]	[more]

BLAST of Lag0002716 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0002716 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A427AHU6	2.7e-06	35.92	Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00002961 PE=4 SV=1	[more]
A0A444GG04	2.7e-06	35.92	Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00001524 PE=4 SV=1	[more]

BLAST of Lag0002716 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0002716.1	Lag0002716.1	mRNA