
Lag0002649 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCAATCTCCGGCGCGACCACGGCGGCCTCAAAAGCGGTGGCTGACTCTCCGAAACCCGAGTCGCCGGTCCCCCGATCCGCCAGGCTCAGCTACCCATGGAAGCGTTGGACCGCCGGTCGAATGATCGCGGTTGGACCGGTGTCTGCCGCACCGGACCGGATATCGGAGAAGGTTGTTGAGAGCATAAAGAACGCGGAGGAGACGTGCTCGGAGGATCCGGCGAGCGGCGAGTGCGCGGCTGCGTGGGATGAGGTGGAGGAGCTGAGCGCCGCCGCTAGCCACGCACGTGACCGGCTGAAGGATGCGGACCCGCTTGAGGATTTTTGTAAGGATAATCCGGAGACGGAGGAGTGTCGCACGTATGAGGACTGA ATGGCAGCAATCTCCGGCGCGACCACGGCGGCCTCAAAAGCGGTGGCTGACTCTCCGAAACCCGAGTCGCCGGTCCCCCGATCCGCCAGGCTCAGCTACCCATGGAAGCGTTGGACCGCCGGTCGAATGATCGCGGTTGGACCGGTGTCTGCCGCACCGGACCGGATATCGGAGAAGGTTGTTGAGAGCATAAAGAACGCGGAGGAGACGTGCTCGGAGGATCCGGCGAGCGGCGAGTGCGCGGCTGCGTGGGATGAGGTGGAGGAGCTGAGCGCCGCCGCTAGCCACGCACGTGACCGGCTGAAGGATGCGGACCCGCTTGAGGATTTTTGTAAGGATAATCCGGAGACGGAGGAGTGTCGCACGTATGAGGACTGA ATGGCAGCAATCTCCGGCGCGACCACGGCGGCCTCAAAAGCGGTGGCTGACTCTCCGAAACCCGAGTCGCCGGTCCCCCGATCCGCCAGGCTCAGCTACCCATGGAAGCGTTGGACCGCCGGTCGAATGATCGCGGTTGGACCGGTGTCTGCCGCACCGGACCGGATATCGGAGAAGGTTGTTGAGAGCATAAAGAACGCGGAGGAGACGTGCTCGGAGGATCCGGCGAGCGGCGAGTGCGCGGCTGCGTGGGATGAGGTGGAGGAGCTGAGCGCCGCCGCTAGCCACGCACGTGACCGGCTGAAGGATGCGGACCCGCTTGAGGATTTTTGTAAGGATAATCCGGAGACGGAGGAGTGTCGCACGTATGAGGACTGA MAAISGATTAASKAVADSPKPESPVPRSARLSYPWKRWTAGRMIAVGPVSAAPDRISEKVVESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDADPLEDFCKDNPETEECRTYED Homology
BLAST of Lag0002649 vs. NCBI nr
Match: XP_022991513.1 (calvin cycle protein CP12-1, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 221.5 bits (563), Expect = 4.1e-54 Identity = 115/125 (92.00%), Postives = 119/125 (95.20%), Query Frame = 0
BLAST of Lag0002649 vs. NCBI nr
Match: KAG6575763.1 (Calvin cycle protein CP12-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 219.5 bits (558), Expect = 1.6e-53 Identity = 115/125 (92.00%), Postives = 118/125 (94.40%), Query Frame = 0
BLAST of Lag0002649 vs. NCBI nr
Match: XP_023548709.1 (calvin cycle protein CP12-1, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 217.2 bits (552), Expect = 7.8e-53 Identity = 113/125 (90.40%), Postives = 117/125 (93.60%), Query Frame = 0
BLAST of Lag0002649 vs. NCBI nr
Match: XP_022953775.1 (calvin cycle protein CP12-1, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 216.5 bits (550), Expect = 1.3e-52 Identity = 114/125 (91.20%), Postives = 117/125 (93.60%), Query Frame = 0
BLAST of Lag0002649 vs. NCBI nr
Match: KAG7014316.1 (Calvin cycle protein CP12-1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 214.5 bits (545), Expect = 5.1e-52 Identity = 112/122 (91.80%), Postives = 116/122 (95.08%), Query Frame = 0
BLAST of Lag0002649 vs. ExPASy Swiss-Prot
Match: O22914 (Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-1 PE=1 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.4e-25 Identity = 67/125 (53.60%), Postives = 86/125 (68.80%), Query Frame = 0
BLAST of Lag0002649 vs. ExPASy Swiss-Prot
Match: Q9LZP9 (Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-2 PE=1 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 4.6e-24 Identity = 58/90 (64.44%), Postives = 72/90 (80.00%), Query Frame = 0
BLAST of Lag0002649 vs. ExPASy Swiss-Prot
Match: A6Q0K5 (Calvin cycle protein CP12, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=CP12 PE=1 SV=2) HSP 1 Score: 75.1 bits (183), Expect = 6.3e-13 Identity = 46/104 (44.23%), Postives = 63/104 (60.58%), Query Frame = 0
BLAST of Lag0002649 vs. ExPASy Swiss-Prot
Match: Q9C9K2 (Calvin cycle protein CP12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-3 PE=1 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 2.4e-12 Identity = 51/135 (37.78%), Postives = 74/135 (54.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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