Lag0002597 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAATGACAAAAAGTTTTAAACTCTTTCCCACTGTTTTCTTAGTGTTTGTTTGGCAGTGTTGTGCGAAGGTGAATGCCACTTTCAACGATGTCACTGGTGTTGTCGATCTCGGCCTCAATCATCGATTTTCCTTCCGTGCATTTGGATCACATGGTTTCGAGATCCCACACGTTGGTGGTAGTGTCGCATCGAGTGTAGACATGCAAAGTCATACAGAAACACCGGGGATTGCCCCTGTTGGGCTTGAAACTCCAATGAGCAAAGGCAATAAAGCTTTGTCTTTTGGTCTTGAAATTAAGAAGGGCCTCACTACATCCCTTGGTCTCGAAATTCACAAGAGCAAGAGCGACGTTGTTGTTTCTCATGGTCACAAAATAAGTAAGAAGAGCGGCGTCAACATTGATATTTCCAATGGTGGAAAAGTTAGTTTGAAGGGCAGCGGTAGTGTTGTTTCAAATGCTGGCAAACTACAAGAAAATTTGTCTCTTCCGACGATATATTTCCCGACGGTACAAAACTGTGTCGACAGAAAGAGGAACTCTCGACACTAA ATGACAATGACAAAAAGTTTTAAACTCTTTCCCACTGTTTTCTTAGTGTTTGTTTGGCAGTGTTGTGCGAAGGTGAATGCCACTTTCAACGATGTCACTGGTGTTGTCGATCTCGGCCTCAATCATCGATTTTCCTTCCGTGCATTTGGATCACATGGTTTCGAGATCCCACACGTTGGTGGTAGTGTCGCATCGAGTGTAGACATGCAAAGTCATACAGAAACACCGGGGATTGCCCCTGTTGGGCTTGAAACTCCAATGAGCAAAGGCAATAAAGCTTTGTCTTTTGGTCTTGAAATTAAGAAGGGCCTCACTACATCCCTTGGTCTCGAAATTCACAAGAGCAAGAGCGACGTTGTTGTTTCTCATGGTCACAAAATAAGTAAGAAGAGCGGCGTCAACATTGATATTTCCAATGGTGGAAAAGTTAGTTTGAAGGGCAGCGGTAGTGTTGTTTCAAATGCTGGCAAACTACAAGAAAATTTGTCTCTTCCGACGATATATTTCCCGACGGTACAAAACTGTGTCGACAGAAAGAGGAACTCTCGACACTAA ATGACAATGACAAAAAGTTTTAAACTCTTTCCCACTGTTTTCTTAGTGTTTGTTTGGCAGTGTTGTGCGAAGGTGAATGCCACTTTCAACGATGTCACTGGTGTTGTCGATCTCGGCCTCAATCATCGATTTTCCTTCCGTGCATTTGGATCACATGGTTTCGAGATCCCACACGTTGGTGGTAGTGTCGCATCGAGTGTAGACATGCAAAGTCATACAGAAACACCGGGGATTGCCCCTGTTGGGCTTGAAACTCCAATGAGCAAAGGCAATAAAGCTTTGTCTTTTGGTCTTGAAATTAAGAAGGGCCTCACTACATCCCTTGGTCTCGAAATTCACAAGAGCAAGAGCGACGTTGTTGTTTCTCATGGTCACAAAATAAGTAAGAAGAGCGGCGTCAACATTGATATTTCCAATGGTGGAAAAGTTAGTTTGAAGGGCAGCGGTAGTGTTGTTTCAAATGCTGGCAAACTACAAGAAAATTTGTCTCTTCCGACGATATATTTCCCGACGGTACAAAACTGTGTCGACAGAAAGAGGAACTCTCGACACTAA MTMTKSFKLFPTVFLVFVWQCCAKVNATFNDVTGVVDLGLNHRFSFRAFGSHGFEIPHVGGSVASSVDMQSHTETPGIAPVGLETPMSKGNKALSFGLEIKKGLTTSLGLEIHKSKSDVVVSHGHKISKKSGVNIDISNGGKVSLKGSGSVVSNAGKLQENLSLPTIYFPTVQNCVDRKRNSRH Homology
BLAST of Lag0002597 vs. NCBI nr
Match: KAE8646352.1 (hypothetical protein Csa_015951, partial [Cucumis sativus]) HSP 1 Score: 131.7 bits (330), Expect = 6.4e-27 Identity = 77/158 (48.73%), Postives = 100/158 (63.29%), Query Frame = 0
BLAST of Lag0002597 vs. NCBI nr
Match: KAA0048674.1 (Ankyrin repeat protein [Cucumis melo var. makuwa] >TYK18172.1 Ankyrin repeat protein [Cucumis melo var. makuwa]) HSP 1 Score: 129.8 bits (325), Expect = 2.4e-26 Identity = 78/166 (46.99%), Postives = 104/166 (62.65%), Query Frame = 0
BLAST of Lag0002597 vs. NCBI nr
Match: KAA0048677.1 (Ankyrin repeat protein [Cucumis melo var. makuwa] >TYK18175.1 Ankyrin repeat protein [Cucumis melo var. makuwa]) HSP 1 Score: 120.2 bits (300), Expect = 1.9e-23 Identity = 74/153 (48.37%), Postives = 93/153 (60.78%), Query Frame = 0
BLAST of Lag0002597 vs. NCBI nr
Match: KAE8646351.1 (hypothetical protein Csa_023818, partial [Cucumis sativus]) HSP 1 Score: 117.9 bits (294), Expect = 9.5e-23 Identity = 73/134 (54.48%), Postives = 91/134 (67.91%), Query Frame = 0
BLAST of Lag0002597 vs. NCBI nr
Match: TYK18187.1 (Ankyrin repeat protein [Cucumis melo var. makuwa]) HSP 1 Score: 107.5 bits (267), Expect = 1.3e-19 Identity = 81/217 (37.33%), Postives = 103/217 (47.47%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|