Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTTCTCTAAGCTTATGGCTTCTTTTATTTTCCTTGCTTTCATCTCATTCTCAATCTCTCTCGTCTCTGCTCAAAAAGCTCTTTCCGCCTACGATATTCTCCAACAGTACGGTTTTCCCGTCGGCATTCTTCCCGTCGGAGTCACCGGCTACGAATTGAACAGAGCTACCGGAGAATTCAGTCTCTTTTTGAATCAGAAGTGCAAATTCTCGATCGATTCCTACGAATTGGAGTACAAACCTACCATCAAGGGCGTGATTTCCGAAGGCAGACTCAGGAAATTGAAAGGCGTTAGTGTTAAGGTCTTCTTGGTGTGGCTCAGCATCGTTGAAGTCGTGAACGATGGTGACGACCTTCAATTCTCTGTCGGAATTGCTTATGCCAATTTTCCGATTGATAGTTTCTATGAGTCGCCGCAGTGTGGATGTGGATTTGACTGCAATAAGGCTGAGAGCTTGGTTTCGGCTTCTTGA mRNA sequence
ATGAGCTTCTCTAAGCTTATGGCTTCTTTTATTTTCCTTGCTTTCATCTCATTCTCAATCTCTCTCGTCTCTGCTCAAAAAGCTCTTTCCGCCTACGATATTCTCCAACAGTACGGTTTTCCCGTCGGCATTCTTCCCGTCGGAGTCACCGGCTACGAATTGAACAGAGCTACCGGAGAATTCAGTCTCTTTTTGAATCAGAAGTGCAAATTCTCGATCGATTCCTACGAATTGGAGTACAAACCTACCATCAAGGGCGTGATTTCCGAAGGCAGACTCAGGAAATTGAAAGGCGTTAGTGTTAAGGTCTTCTTGGTGTGGCTCAGCATCGTTGAAGTCGTGAACGATGGTGACGACCTTCAATTCTCTGTCGGAATTGCTTATGCCAATTTTCCGATTGATAGTTTCTATGAGTCGCCGCAGTGTGGATGTGGATTTGACTGCAATAAGGCTGAGAGCTTGGTTTCGGCTTCTTGA Coding sequence (CDS)
ATGAGCTTCTCTAAGCTTATGGCTTCTTTTATTTTCCTTGCTTTCATCTCATTCTCAATCTCTCTCGTCTCTGCTCAAAAAGCTCTTTCCGCCTACGATATTCTCCAACAGTACGGTTTTCCCGTCGGCATTCTTCCCGTCGGAGTCACCGGCTACGAATTGAACAGAGCTACCGGAGAATTCAGTCTCTTTTTGAATCAGAAGTGCAAATTCTCGATCGATTCCTACGAATTGGAGTACAAACCTACCATCAAGGGCGTGATTTCCGAAGGCAGACTCAGGAAATTGAAAGGCGTTAGTGTTAAGGTCTTCTTGGTGTGGCTCAGCATCGTTGAAGTCGTGAACGATGGTGACGACCTTCAATTCTCTGTCGGAATTGCTTATGCCAATTTTCCGATTGATAGTTTCTATGAGTCGCCGCAGTGTGGATGTGGATTTGACTGCAATAAGGCTGAGAGCTTGGTTTCGGCTTCTTGA Protein sequence
MSFSKLMASFIFLAFISFSISLVSAQKALSAYDILQQYGFPVGILPVGVTGYELNRATGEFSLFLNQKCKFSIDSYELEYKPTIKGVISEGRLRKLKGVSVKVFLVWLSIVEVVNDGDDLQFSVGIAYANFPIDSFYESPQCGCGFDCNKAESLVSAS
Homology
BLAST of Lag0002566 vs. NCBI nr
Match:
XP_022991260.1 (uncharacterized protein At5g01610-like [Cucurbita maxima])
HSP 1 Score: 266.2 bits (679), Expect = 1.9e-67
Identity = 132/158 (83.54%), Postives = 146/158 (92.41%), Query Frame = 0
Query: 1 MSFSKLMASFIFLAFISFSISLVSAQKALSAYDILQQYGFPVGILPVGVTGYELNRATGE 60 MSFSKLMAS +FLAF+SFS LVSAQKAL+AYDI+QQYGFPVGILP+GVTGYEL+R TG Sbjct: 1 MSFSKLMASLLFLAFVSFSSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYELDRDTGS 60 Query: 61 FSLFLNQKCKFSIDSYELEYKPTIKGVISEGRLRKLKGVSVKVFLVWLSIVEVVNDGDDL 120 FSLFL+QKCKF+IDSYELEYKPTI GVIS+GRL KLKGVSVK+ ++WLSIVEVV+DGD+L Sbjct: 61 FSLFLDQKCKFTIDSYELEYKPTITGVISQGRLSKLKGVSVKILILWLSIVEVVSDGDEL 120 Query: 121 QFSVGIAYANFPIDSFYESPQCGCGFDCNKAESLVSAS 159 FSVGIA ANFPIDSFYESPQCGCGFDCNK SLVSAS Sbjct: 121 GFSVGIASANFPIDSFYESPQCGCGFDCNKVGSLVSAS 158
BLAST of Lag0002566 vs. NCBI nr
Match:
XP_038898643.1 (uncharacterized protein LOC120086187 [Benincasa hispida])
HSP 1 Score: 264.6 bits (675), Expect = 5.4e-67
Identity = 133/161 (82.61%), Postives = 147/161 (91.30%), Query Frame = 0
Query: 1 MSFSKLMAS---FIFLAFISFSISLVSAQKALSAYDILQQYGFPVGILPVGVTGYELNRA 60 M+FSKLMAS + LAF+SFS LVSAQK L+AYDILQQYGFPVGILPVGV GYELNRA Sbjct: 1 MNFSKLMASLPLLLLLAFVSFSSPLVSAQKTLTAYDILQQYGFPVGILPVGVNGYELNRA 60 Query: 61 TGEFSLFLNQKCKFSIDSYELEYKPTIKGVISEGRLRKLKGVSVKVFLVWLSIVEVVNDG 120 TGEFSLFLNQKCKF I+SYELEYK T++GVIS+GR+RKLKGVSVK+ L+WLSIVEVVNDG Sbjct: 61 TGEFSLFLNQKCKFKIESYELEYKSTVQGVISQGRIRKLKGVSVKIVLLWLSIVEVVNDG 120 Query: 121 DDLQFSVGIAYANFPIDSFYESPQCGCGFDCNKAESLVSAS 159 DDLQFSVGIA ANFP+DSFYESP+CGCGFDC+KA SLVSAS Sbjct: 121 DDLQFSVGIASANFPLDSFYESPRCGCGFDCDKAGSLVSAS 161
BLAST of Lag0002566 vs. NCBI nr
Match:
XP_022953728.1 (uncharacterized protein LOC111456173 [Cucurbita moschata])
HSP 1 Score: 263.1 bits (671), Expect = 1.6e-66
Identity = 129/158 (81.65%), Postives = 146/158 (92.41%), Query Frame = 0
Query: 1 MSFSKLMASFIFLAFISFSISLVSAQKALSAYDILQQYGFPVGILPVGVTGYELNRATGE 60 MSFSKLMAS +FLAF+SFS LVSAQKAL+AYDI+QQYGFPVGILP+GVTGY+L+R TG Sbjct: 1 MSFSKLMASLLFLAFVSFSSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYKLDRDTGS 60 Query: 61 FSLFLNQKCKFSIDSYELEYKPTIKGVISEGRLRKLKGVSVKVFLVWLSIVEVVNDGDDL 120 FSLFL+QKCKF+IDSYELEYKPT+ GVIS+G+L KLKGVSVK+ ++WLSIVEVV+DGD+L Sbjct: 61 FSLFLDQKCKFAIDSYELEYKPTVTGVISQGKLSKLKGVSVKILILWLSIVEVVSDGDEL 120 Query: 121 QFSVGIAYANFPIDSFYESPQCGCGFDCNKAESLVSAS 159 FSVGIA ANFPIDSFYESPQCGCGFDCNK SLVSAS Sbjct: 121 GFSVGIASANFPIDSFYESPQCGCGFDCNKVGSLVSAS 158
BLAST of Lag0002566 vs. NCBI nr
Match:
XP_023549402.1 (uncharacterized protein LOC111807766 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 261.5 bits (667), Expect = 4.6e-66
Identity = 128/158 (81.01%), Postives = 145/158 (91.77%), Query Frame = 0
Query: 1 MSFSKLMASFIFLAFISFSISLVSAQKALSAYDILQQYGFPVGILPVGVTGYELNRATGE 60 MSFSKLMAS +FLAF+SFS LVSAQKAL+AYDI+QQYGFPVGILP+GVTGY+L+R TG Sbjct: 52 MSFSKLMASLLFLAFVSFSSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYKLDRDTGS 111 Query: 61 FSLFLNQKCKFSIDSYELEYKPTIKGVISEGRLRKLKGVSVKVFLVWLSIVEVVNDGDDL 120 FSLFL+QKCKF+IDSYELEYKPT+ GVIS+G+L KLKGVSVK+ ++W SIVEVV+DGD+L Sbjct: 112 FSLFLDQKCKFAIDSYELEYKPTVTGVISQGKLSKLKGVSVKILILWFSIVEVVSDGDEL 171 Query: 121 QFSVGIAYANFPIDSFYESPQCGCGFDCNKAESLVSAS 159 FSVGIA ANFPIDSFYESPQCGCGFDCNK SLVSAS Sbjct: 172 GFSVGIASANFPIDSFYESPQCGCGFDCNKVGSLVSAS 209
BLAST of Lag0002566 vs. NCBI nr
Match:
XP_004136020.3 (uncharacterized protein LOC101206914 [Cucumis sativus] >KGN45500.2 hypothetical protein Csa_016049 [Cucumis sativus])
HSP 1 Score: 257.7 bits (657), Expect = 6.6e-65
Identity = 130/159 (81.76%), Postives = 145/159 (91.19%), Query Frame = 0
Query: 1 MSFSKLMASFIFLAFISFSISLVSAQKALSAYDILQQYGFPVGILPVGVTGYELNRATGE 60 MSFSKLMAS + LA IS S SLVS +AL+AYDILQQYGFPVGILP+G TGY+LNRATGE Sbjct: 1 MSFSKLMASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGE 60 Query: 61 FSLFLNQKCKFSIDSYELEYKPTIKGVISEGRLRKLKGVSVKVFLVWLSIVEVVNDGDDL 120 FSL+L+QKCKF IDSYELEYK T++GVIS+GR+RKLKGVSVK+FL+WLSIVEVVNDGDDL Sbjct: 61 FSLYLSQKCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDL 120 Query: 121 QFSVGIAYANFPIDSFYESPQCGCGFDC-NKAESLVSAS 159 QFSVGIA ANFP+DSFYESP+CGCGFDC N A SLVSAS Sbjct: 121 QFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS 159
The following BLAST results are available for this feature:
Match Name E-value Identity Description
XP_022991260.1 1.9e-67 83.54 uncharacterized protein At5g01610-like [Cucurbita maxima] [more]
XP_038898643.1 5.4e-67 82.61 uncharacterized protein LOC120086187 [Benincasa hispida] [more]
XP_022953728.1 1.6e-66 81.65 uncharacterized protein LOC111456173 [Cucurbita moschata] [more]
XP_023549402.1 4.6e-66 81.01 uncharacterized protein LOC111807766 [Cucurbita pepo subsp. pepo] [more]
XP_004136020.3 6.6e-65 81.76 uncharacterized protein LOC101206914 [Cucumis sativus] >KGN45500.2 hypothetical ... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
A T G A G C T T C T C T A A G C T T A T G G C T T C T T T T A T T T T C C T T G C T T T C A T C T C A T T C T C A A T C T C T C T C G T C T C T G C T C A A A A A G C T C T T T C C G C C T A C G A T A T T C T C C A A C A G T A C G G T T T T C C C G T C G G C A T T C T T C C C G T C G G A G T C A C C G G C T A C G A A T T G A A C A G A G C T A C C G G A G A A T T C A G T C T C T T T T T G A A T C A G A A G T G C A A A T T C T C G A T C G A T T C C T A C G A A T T G G A G T A C A A A C C T A C C A T C A A G G G C G T G A T T T C C G A A G G C A G A C T C A G G A A A T T G A A A G G C G T T A G T G T T A A G G T C T T C T T G G T G T G G C T C A G C A T C G T T G A A G T C G T G A A C G A T G G T G A C G A C C T T C A A T T C T C T G T C G G A A T T G C T T A T G C C A A T T T T C C G A T T G A T A G T T T C T A T G A G T C G C C G C A G T G T G G A T G T G G A T T T G A C T G C A A T A A G G C T G A G A G C T T G G T T T C G G C T T C T T G A 50 100 150 200 250 300 350 400 450 Expect = 8.6E-35 / Score = 121.4 Score = Expect = 4.5E-35 / Score = 120.5 Score = Score = Sequence G3DSA:2.30.240.10 SSF141562 PF04398 PTHR31676 PTHR31676:SF76
Relationships
The following mRNA feature(s) are a part of this gene: