
Lag0002537 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCACCGAGCTCAAACACCGCAAACCAGACGACTCACAGCCCCCCTCCGACGTCCCGGCCACCGTCGACGGCGGCGCCACAGCAAAGAACAAAGCCGTCGCCAAACGAGGCTTCAAATCGCTAGCTCTCGCAGTCTCCATCCCCATCTCCCTCACCCTCCTCTCCATCTTCCTCCTTTCCAATCCCAAGCGCTACTACCCTTCCTCCGCCGTCAAACCCTTCTGGTTTCCGTCGACGAAGGTCGTTAGTTTGGGGTCTCTGGCTTCTAGCTTCTTCATGGGTGTCTCGGCCTGGCTCGTCTGGGCCGAGGGTGGCTTCCACGCCAGGCCCAACGCCCTGTATCTTTACAGTTTGTACTTGGTGCTGTGCCTGGCGTGGTACGGCCTCGTGCTCGGGGCCGGTGCGCGGTGGCTCGGCTCGGTGGCATGTTTGGCTAAGACGGCGGCGCTGATTGGATGTGACCGGTTGTTCCGGGGAGTCAATCCGATTGCGGCTGACTTGATTAAGCCATGTTTGGCTTGGTCTGTTTTTCTTACTGTTGTTAATCTTACCATGATTTCCCTTTGA ATGGCTTCCACCGAGCTCAAACACCGCAAACCAGACGACTCACAGCCCCCCTCCGACGTCCCGGCCACCGTCGACGGCGGCGCCACAGCAAAGAACAAAGCCGTCGCCAAACGAGGCTTCAAATCGCTAGCTCTCGCAGTCTCCATCCCCATCTCCCTCACCCTCCTCTCCATCTTCCTCCTTTCCAATCCCAAGCGCTACTACCCTTCCTCCGCCGTCAAACCCTTCTGGTTTCCGTCGACGAAGGTCGTTAGTTTGGGGTCTCTGGCTTCTAGCTTCTTCATGGGTGTCTCGGCCTGGCTCGTCTGGGCCGAGGGTGGCTTCCACGCCAGGCCCAACGCCCTGTATCTTTACAGTTTGTACTTGGTGCTGTGCCTGGCGTGGTACGGCCTCGTGCTCGGGGCCGGTGCGCGGTGGCTCGGCTCGGTGGCATGTTTGGCTAAGACGGCGGCGCTGATTGGATGTGACCGGTTGTTCCGGGGAGTCAATCCGATTGCGGCTGACTTGATTAAGCCATGTTTGGCTTGGTCTGTTTTTCTTACTGTTGTTAATCTTACCATGATTTCCCTTTGA ATGGCTTCCACCGAGCTCAAACACCGCAAACCAGACGACTCACAGCCCCCCTCCGACGTCCCGGCCACCGTCGACGGCGGCGCCACAGCAAAGAACAAAGCCGTCGCCAAACGAGGCTTCAAATCGCTAGCTCTCGCAGTCTCCATCCCCATCTCCCTCACCCTCCTCTCCATCTTCCTCCTTTCCAATCCCAAGCGCTACTACCCTTCCTCCGCCGTCAAACCCTTCTGGTTTCCGTCGACGAAGGTCGTTAGTTTGGGGTCTCTGGCTTCTAGCTTCTTCATGGGTGTCTCGGCCTGGCTCGTCTGGGCCGAGGGTGGCTTCCACGCCAGGCCCAACGCCCTGTATCTTTACAGTTTGTACTTGGTGCTGTGCCTGGCGTGGTACGGCCTCGTGCTCGGGGCCGGTGCGCGGTGGCTCGGCTCGGTGGCATGTTTGGCTAAGACGGCGGCGCTGATTGGATGTGACCGGTTGTTCCGGGGAGTCAATCCGATTGCGGCTGACTTGATTAAGCCATGTTTGGCTTGGTCTGTTTTTCTTACTGTTGTTAATCTTACCATGATTTCCCTTTGA MASTELKHRKPDDSQPPSDVPATVDGGATAKNKAVAKRGFKSLALAVSIPISLTLLSIFLLSNPKRYYPSSAVKPFWFPSTKVVSLGSLASSFFMGVSAWLVWAEGGFHARPNALYLYSLYLVLCLAWYGLVLGAGARWLGSVACLAKTAALIGCDRLFRGVNPIAADLIKPCLAWSVFLTVVNLTMISL Homology
BLAST of Lag0002537 vs. NCBI nr
Match: XP_038897197.1 (translocator protein homolog [Benincasa hispida]) HSP 1 Score: 295.4 bits (755), Expect = 3.4e-76 Identity = 150/191 (78.53%), Postives = 167/191 (87.43%), Query Frame = 0
BLAST of Lag0002537 vs. NCBI nr
Match: KAA0068008.1 (translocator protein-like protein [Cucumis melo var. makuwa] >TYK18119.1 translocator protein-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 280.0 bits (715), Expect = 1.5e-71 Identity = 145/191 (75.92%), Postives = 159/191 (83.25%), Query Frame = 0
BLAST of Lag0002537 vs. NCBI nr
Match: XP_022992488.1 (translocator protein homolog [Cucurbita maxima]) HSP 1 Score: 271.6 bits (693), Expect = 5.3e-69 Identity = 141/192 (73.44%), Postives = 161/192 (83.85%), Query Frame = 0
BLAST of Lag0002537 vs. NCBI nr
Match: XP_023548365.1 (translocator protein homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 268.1 bits (684), Expect = 5.9e-68 Identity = 137/190 (72.11%), Postives = 158/190 (83.16%), Query Frame = 0
BLAST of Lag0002537 vs. NCBI nr
Match: XP_022953735.1 (translocator protein homolog [Cucurbita moschata]) HSP 1 Score: 266.9 bits (681), Expect = 1.3e-67 Identity = 138/192 (71.88%), Postives = 158/192 (82.29%), Query Frame = 0
BLAST of Lag0002537 vs. ExPASy Swiss-Prot
Match: O82245 (Translocator protein homolog OS=Arabidopsis thaliana OX=3702 GN=TSPO PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.5e-29 Identity = 73/194 (37.63%), Postives = 109/194 (56.19%), Query Frame = 0
BLAST of Lag0002537 vs. ExPASy Swiss-Prot
Match: P30536 (Translocator protein OS=Homo sapiens OX=9606 GN=TSPO PE=1 SV=3) HSP 1 Score: 45.4 bits (106), Expect = 8.1e-04 Identity = 45/132 (34.09%), Postives = 62/132 (46.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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