Lag0002519 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0002519
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionaspartyl protease family protein At5g10770
Locationchr4: 43534319 .. 43534671 (+)
RNA-Seq ExpressionLag0002519
SyntenyLag0002519
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTCAAATCCCAAGATGTCCAATTATTACCTTTTGAATTTGACTGGAATCAACATCGGTGGGGTGAAATTGGATGCGCTGCGCTTGGCTTCGAATAATGGGGTTGTGGGTTTAATCTTACTGGGGTTAAGTAAGTGGATATTCCGCCCGTGAAATTTTACTTTGAAGGTGATTCAGAGCTGAGTGTGGATGCTGAAGGGATTTTTTACTTTGTGAAATCTGATTCTTCTCGGAGATGTTTGGCGCATCGAGTGCGGCTGATGAAGATCGCCTTGGGGTTATTGGAAATTATCAGCAGAAGAATCAAAGGGTTGTTTATAATACCAAGGAATCCAAGCTGGGTTGTTTAG

mRNA sequence

ATGATCTCAAATCCCAAGATGTCCAATTATTACCTTTTGAATTTGACTGGAATCAACATCGGTGGGGTGAAATTGGATGCGCTGCGCTTGGCTTCGAATAATGGGGTTGTGGGTGATTCAGAGCTGAGTGTGGATGCTGAAGGGATTTTTTACTTTGTGAAATCTGATTCTTCTCGGAGATGTTTGGCGCATCGAGTGCGGCTGATGAAGATCGCCTTGGGGTTATTGGAAATTATCAGCAGAAGAATCAAAGGGTTGTTTATAATACCAAGGAATCCAAGCTGGGTTGTTTAG

Coding sequence (CDS)

ATGATCTCAAATCCCAAGATGTCCAATTATTACCTTTTGAATTTGACTGGAATCAACATCGGTGGGGTGAAATTGGATGCGCTGCGCTTGGCTTCGAATAATGGGGTTGTGGGTGATTCAGAGCTGAGTGTGGATGCTGAAGGGATTTTTTACTTTGTGAAATCTGATTCTTCTCGGAGATGTTTGGCGCATCGAGTGCGGCTGATGAAGATCGCCTTGGGGTTATTGGAAATTATCAGCAGAAGAATCAAAGGGTTGTTTATAATACCAAGGAATCCAAGCTGGGTTGTTTAG

Protein sequence

MISNPKMSNYYLLNLTGINIGGVKLDALRLASNNGVVGDSELSVDAEGIFYFVKSDSSRRCLAHRVRLMKIALGLLEIISRRIKGLFIIPRNPSWVV
Homology
[Close]
BLAST of Lag0002519 vs. NCBI nr
Match: XP_008461208.1 (PREDICTED: aspartyl protease family protein At5g10770 [Cucumis melo])

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-06
Identity = 42/125 (33.60%), Postives = 54/125 (43.20%), Query Frame = 0 

Query: 1   MISNPKMSNYYLLNLTGINIGGVKLDALRLASNNGVV----------------------- 60
           MI NP+MSN+Y LNLTGI+IGGV L+  RL+SN GV+                       
Sbjct: 331 MIQNPQMSNFYFLNLTGISIGGVNLNVPRLSSNEGVLSLLDSGTVITRLSPSIYKAFKAE 390

Query: 61  ---------------------------------------GDSELSVDAEGIFYFVKSDSS 64
                                                  G++E+ VD EG+FYFVKSD+S
Sbjct: 391 FEKQFSGYRTTPGFSILNTCFNLTGYEEVNIPTVKFIFEGNAEMIVDVEGVFYFVKSDAS 450

[Close]
BLAST of Lag0002519 vs. NCBI nr
Match: KAA0058691.1 (aspartyl protease family protein [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-06
Identity = 42/125 (33.60%), Postives = 54/125 (43.20%), Query Frame = 0 

Query: 1   MISNPKMSNYYLLNLTGINIGGVKLDALRLASNNGVV----------------------- 60
           MI NP+MSN+Y LNLTGI+IGGV L+  RL+SN GV+                       
Sbjct: 332 MIQNPQMSNFYFLNLTGISIGGVNLNVPRLSSNEGVLSLLDSGTVITRLSPSIYKAFKAE 391

Query: 61  ---------------------------------------GDSELSVDAEGIFYFVKSDSS 64
                                                  G++E+ VD EG+FYFVKSD+S
Sbjct: 392 FEKQFSGYRTTPGFSILNTCFNLTGYEEVNIPTVKFIFEGNAEMIVDVEGVFYFVKSDAS 451

[Close]
BLAST of Lag0002519 vs. NCBI nr
Match: XP_004135889.2 (aspartyl protease family protein At5g10770 [Cucumis sativus] >KGN45199.1 hypothetical protein Csa_015932 [Cucumis sativus])

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-06
Identity = 42/125 (33.60%), Postives = 54/125 (43.20%), Query Frame = 0 

Query: 1   MISNPKMSNYYLLNLTGINIGGVKLDALRLASNNGVV----------------------- 60
           MI NP+MSN+Y LNLTGI+IGGV L+  RL+SN GV+                       
Sbjct: 331 MIQNPQMSNFYFLNLTGISIGGVNLNVPRLSSNEGVLSLLDSGTVITRLSPSIYKAFKAE 390

Query: 61  ---------------------------------------GDSELSVDAEGIFYFVKSDSS 64
                                                  G++E+ VD EG+FYFVKSD+S
Sbjct: 391 FEKQFSGYRTTPGFSILNTCFNLTGYEEVNIPTVKFIFEGNAEMIVDVEGVFYFVKSDAS 450

[Close]
BLAST of Lag0002519 vs. NCBI nr
Match: TYK10497.1 (aspartyl protease family protein [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-06
Identity = 42/125 (33.60%), Postives = 54/125 (43.20%), Query Frame = 0 

Query: 1   MISNPKMSNYYLLNLTGINIGGVKLDALRLASNNGVV----------------------- 60
           MI NP+MSN+Y LNLTGI+IGGV L+  RL+SN GV+                       
Sbjct: 252 MIQNPQMSNFYFLNLTGISIGGVNLNVPRLSSNEGVLSLLDSGTVITRLSPSIYKAFKAE 311

Query: 61  ---------------------------------------GDSELSVDAEGIFYFVKSDSS 64
                                                  G++E+ VD EG+FYFVKSD+S
Sbjct: 312 FEKQFSGYRTTPGFSILNTCFNLTGYEEVNIPTVKFIFEGNAEMIVDVEGVFYFVKSDAS 371

[Close]
BLAST of Lag0002519 vs. NCBI nr
Match: XP_038899807.1 (aspartyl protease family protein At5g10770 [Benincasa hispida])

HSP 1 Score: 61.2 bits (147), Expect = 5.6e-06
Identity = 40/125 (32.00%), Postives = 53/125 (42.40%), Query Frame = 0 

Query: 1   MISNPKMSNYYLLNLTGINIGGVKLDALRLASNNGVV----------------------- 60
           M+ NP+MSN+Y LNLTGI+IGGV L+   L SN G++                       
Sbjct: 325 MVQNPQMSNFYFLNLTGISIGGVNLNVPGLTSNEGIMSLIDSGTVITRLSPSIYRAFKAE 384

Query: 61  ---------------------------------------GDSELSVDAEGIFYFVKSDSS 64
                                                  G++E++VD EGIFYFVKSD+S
Sbjct: 385 FEKQFSGYKTTPGFSILNTCYNLSGYQEVNIPTVKFIFEGNAEMTVDVEGIFYFVKSDAS 444

The following BLAST results are available for this feature:
BLAST of Lag0002519 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008461208.11.1e-0633.60PREDICTED: aspartyl protease family protein At5g10770 [Cucumis melo][more]
KAA0058691.11.1e-0633.60aspartyl protease family protein [Cucumis melo var. makuwa][more]
XP_004135889.21.1e-0633.60aspartyl protease family protein At5g10770 [Cucumis sativus] >KGN45199.1 hypothe... [more]
TYK10497.11.1e-0633.60aspartyl protease family protein [Cucumis melo var. makuwa][more]
XP_038899807.15.6e-0632.00aspartyl protease family protein At5g10770 [Benincasa hispida][more]
BLAST of Lag0002519 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0002519.1Lag0002519.1mRNA