Lag0002489 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCGATCAAATTCCTAGTTTCGCTAGCTCTTGTCGTTCTTCTCTTGTTCTCTGAGTCTCCAGCCGCTTCTGCCGCCGCTTCGAATTCTCTTACCGGAATGTTTCGCCGGGACGTCCTTCAGGCGGCGGCTCATAAGATTGCAGATAACAGTGTCGAGTCCTCTGTTGGACGGAAGATGAATGTTCATATCAAAAGGCGGATCCGAGCGGGACTAACCGGTGGCCACCACAGATCGGCGGCGAATCGGAACCGAGGCGCGTCCTTTGGCGTTGGATTGCTTTGTATCTGCATTTTTTGGGGGATTGTTCTTGATCTGTAA ATGGCTGCGATCAAATTCCTAGTTTCGCTAGCTCTTGTCGTTCTTCTCTTGTTCTCTGAGTCTCCAGCCGCTTCTGCCGCCGCTTCGAATTCTCTTACCGGAATGTTTCGCCGGGACGTCCTTCAGGCGGCGGCTCATAAGATTGCAGATAACAGTGTCGAGTCCTCTGTTGGACGGAAGATGAATGTTCATATCAAAAGGCGGATCCGAGCGGGACTAACCGGTGGCCACCACAGATCGGCGGCGAATCGGAACCGAGGCGCGTCCTTTGGCGTTGGATTGCTTTGTATCTGCATTTTTTGGGGGATTGTTCTTGATCTGTAA ATGGCTGCGATCAAATTCCTAGTTTCGCTAGCTCTTGTCGTTCTTCTCTTGTTCTCTGAGTCTCCAGCCGCTTCTGCCGCCGCTTCGAATTCTCTTACCGGAATGTTTCGCCGGGACGTCCTTCAGGCGGCGGCTCATAAGATTGCAGATAACAGTGTCGAGTCCTCTGTTGGACGGAAGATGAATGTTCATATCAAAAGGCGGATCCGAGCGGGACTAACCGGTGGCCACCACAGATCGGCGGCGAATCGGAACCGAGGCGCGTCCTTTGGCGTTGGATTGCTTTGTATCTGCATTTTTTGGGGGATTGTTCTTGATCTGTAA MAAIKFLVSLALVVLLLFSESPAASAAASNSLTGMFRRDVLQAAAHKIADNSVESSVGRKMNVHIKRRIRAGLTGGHHRSAANRNRGASFGVGLLCICIFWGIVLDL Homology
BLAST of Lag0002489 vs. NCBI nr
Match: KAG6575859.1 (hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014393.1 hypothetical protein SDJN02_24570, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 102.4 bits (254), Expect = 2.4e-18 Identity = 67/103 (65.05%), Postives = 77/103 (74.76%), Query Frame = 0
BLAST of Lag0002489 vs. NCBI nr
Match: KAA0046715.1 (E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa] >TYK18251.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]) HSP 1 Score: 84.3 bits (207), Expect = 6.8e-13 Identity = 61/113 (53.98%), Postives = 76/113 (67.26%), Query Frame = 0
BLAST of Lag0002489 vs. NCBI nr
Match: KAA0068047.1 (protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no-on-transient A-like [Cucumis melo var. makuwa]) HSP 1 Score: 75.5 bits (184), Expect = 3.1e-10 Identity = 56/107 (52.34%), Postives = 71/107 (66.36%), Query Frame = 0
BLAST of Lag0002489 vs. NCBI nr
Match: KGN44886.1 (hypothetical protein Csa_015765 [Cucumis sativus]) HSP 1 Score: 75.1 bits (183), Expect = 4.1e-10 Identity = 58/116 (50.00%), Postives = 72/116 (62.07%), Query Frame = 0
BLAST of Lag0002489 vs. NCBI nr
Match: XP_008451651.1 (PREDICTED: E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo]) HSP 1 Score: 69.3 bits (168), Expect = 2.3e-08 Identity = 51/97 (52.58%), Postives = 64/97 (65.98%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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