Lag0002375 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGGACAACCTGTAAGCAAGAAGGGCAGCTACATGCTGCAAAAGGGATTCCTGAGTGACCAAGGTAGCGAAGAAAAAGAAGACACACAAACAAACATGGATAACCAGGATATGGAGATGGAGACGGCAAACGACAAAGATAAGGAAAATCCAAAAAATACAGCAGAAGAGGTTGCAGACAAACTCGAAAAAATGAAGATAACAATCGCAGAAAGAGCCAAAGTAGTGGCTATTGAGGATGACGACCTTGAGGAAGCGACAGAAGACCTCCAAGGGGCAGTATTATGCAGAGTGATCACTTTAAAGCTTATCAATCCAGAAATTTTCAAAACATTCATGCCAAAAATATGGAATAAGGAAGGAAGAGTGCGCATAAAGCCCAAGGGCAGAAACACCTTCTTGTGTGAATTTAACAACTCTCATGAGAAGGAAAGAATAAAAAAAGGGGGCCTTGGAACTACGACAAAGCTCTATTAGTTATGGAAGAGGCGCAAGGAGCTAGCAGGATCTCAACAACAGCATTCAGGTATGTGAGTTTCTGGATTCACATACATGACTTACCTATGGTTTGCCATCGCAGGAAATGGGCGATTCAACTAGGCAATTCAATTGGAGAATTCGTTGATGTGGATCTCGAGGAAGAAGGAGGCAGCGGGGAAAACACCCTGAGAATCTTGGTGAAAATCGACATAATGCAACCGTTAAAGAGAGGGCTAATGGTCAGAATAGGATCCAAAGCAGAGGAAACTTGGGTAAAGGCATCTTATGAACGTCTCCCAGAATTCTGCTATGGTTGCGGCACGATAGGGCATATTCAACAAGAGTGCGAAGCAGAGAGCAAGAGCGAGGAAGAAAACCTGTATGGAGAATGGTTGAGAGCAACTCCTATTCTCGGAGGTCCGCCGAGGCAAAAACCTCAAAATCCCTTCAGGGGCGGCCCTTGGGGAAGGGGAAGAGGGCGAAGAGCAGCGTTCCAGAATTTTAGAGAGGATTGGAGCTCGGGCAGAAGCAACAGAGAAAACTGGAGAAGAAAAGACCCTGGACCAGATTGTGAAAACGCCCGCAAAGAAGGAGGAAAAGTTGAAGTTTCCGGCGTAAACGAAGAGGCTCCGGCGAGAGGCTCCGATTACAGTCCAGGCGAAACTCCAACGGCTAGTTTTAGGTCAGATAAAGGAAAGGTTGTAGAAGAGTCAGACCAAAACAGTGCAGCAGATAGGGGAAAAGGAAAAGAACCAGAGGATAAAGGTCATATCAGAGTCTCTCTTAAGAATAAAGGACAAAATGGGGAAAAAGAGTACAGACAGACAGTGGGGATTGTGATTAAGGACGACAGTGATGGAATGGAAAAGTCAAAAGGAAAAACGTTCGACCTAAAGCATCCAGCCAATACTAGGCCAACTTTTGGCAATGGGCCACTTGGGCCAAATAAAGAGATTATAAGGGCCATAAAGCAAATCGATCAGAAAGAAAAAAAAGGGACAATAGAACCCGGAGGCCCCCTCGGACAGGAGAATAGAGAGGAACAGGGGAAAAACTTAAGAAAGTGGAAGAGGAGGGCCAGATGTGACTCGGGAAAAGCCTATTCACAAAGCAATTCAGACATATTGATGAGTATGGAGAAGAGAAAACTGGAAAATAGTGCCCAAGGAGAGGAAAAGGAATTAGTTAAAAAAAAACAGTGCATACCTTACTTCGAGGTCGACGAAGGGATATCGGCGGAGGCTGAAATTCAGCCCCGCCGGACGCCATGA ATGGAGGGACAACCTGTAAGCAAGAAGGGCAGCTACATGCTGCAAAAGGGATTCCTGAGTGACCAAGGTAGCGAAGAAAAAGAAGACACACAAACAAACATGGATAACCAGGATATGGAGATGGAGACGGCAAACGACAAAGATAAGGAAAATCCAAAAAATACAGCAGAAGAGGTTGCAGACAAACTCGAAAAAATGAAGATAACAATCGCAGAAAGAGCCAAAGTAGTGGCTATTGAGGATGACGACCTTGAGGAAGCGACAGAAGACCTCCAAGGGGCAGTATTATGCAGAGTGATCACTTTAAAGCTTATCAATCCAGAAATTTTCAAAACATTCATGCCAAAAATATGGAATAAGGAAGGAAGAGTGCGCATAAAGCCCAAGGGCAGAAACACCTTCTTGAAATGGGCGATTCAACTAGGCAATTCAATTGGAGAATTCGTTGATGTGGATCTCGAGGAAGAAGGAGGCAGCGGGGAAAACACCCTGAGAATCTTGGTGAAAATCGACATAATGCAACCGTTAAAGAGAGGGCTAATGGTCAGAATAGGATCCAAAGCAGAGGAAACTTGGGTAAAGGCATCTTATGAACGTCTCCCAGAATTCTGCTATGGTTGCGGCACGATAGGGCATATTCAACAAGAGTGCGAAGCAGAGAGCAAGAGCGAGGAAGAAAACCTGTATGGAGAATGGTTGAGAGCAACTCCTATTCTCGGAGGTCCGCCGAGGCAAAAACCTCAAAATCCCTTCAGGGGCGGCCCTTGGGGAAGGGGAAGAGGGCGAAGAGCAGCGTTCCAGAATTTTAGAGAGGATTGGAGCTCGGGCAGAAGCAACAGAGAAAACTGGAGAAGAAAAGACCCTGGACCAGATTGTGAAAACGCCCGCAAAGAAGGAGGAAAAGTTGAAGTTTCCGGCGTAAACGAAGAGGCTCCGGCGAGAGGCTCCGATTACAGTCCAGGCGAAACTCCAACGGCTAGTTTTAGGTCAGATAAAGGAAAGGTTGTAGAAGAGTCAGACCAAAACAGTGCAGCAGATAGGGGAAAAGGAAAAGAACCAGAGGATAAAGGTCATATCAGAGTCTCTCTTAAGAATAAAGGACAAAATGGGGAAAAAGAGTACAGACAGACAGTGGGGATTGTGATTAAGGACGACAGTGATGGAATGGAAAAGTCAAAAGGAAAAACGTTCGACCTAAAGCATCCAGCCAATACTAGGCCAACTTTTGGCAATGGGCCACTTGGGCCAAATAAAGAGATTATAAGGGCCATAAAGCAAATCGATCAGAAAGAAAAAAAAGGGACAATAGAACCCGGAGGCCCCCTCGGACAGGAGAATAGAGAGGAACAGGGGAAAAACTTAAGAAAGTGGAAGAGGAGGGCCAGATGTGACTCGGGAAAAGCCTATTCACAAAGCAATTCAGACATATTGATGAGTATGGAGAAGAGAAAACTGGAAAATAGTGCCCAAGGAGAGGAAAAGGAATTAGTTAAAAAAAAACAGTGCATACCTTACTTCGAGGTCGACGAAGGGATATCGGCGGAGGCTGAAATTCAGCCCCGCCGGACGCCATGA ATGGAGGGACAACCTGTAAGCAAGAAGGGCAGCTACATGCTGCAAAAGGGATTCCTGAGTGACCAAGGTAGCGAAGAAAAAGAAGACACACAAACAAACATGGATAACCAGGATATGGAGATGGAGACGGCAAACGACAAAGATAAGGAAAATCCAAAAAATACAGCAGAAGAGGTTGCAGACAAACTCGAAAAAATGAAGATAACAATCGCAGAAAGAGCCAAAGTAGTGGCTATTGAGGATGACGACCTTGAGGAAGCGACAGAAGACCTCCAAGGGGCAGTATTATGCAGAGTGATCACTTTAAAGCTTATCAATCCAGAAATTTTCAAAACATTCATGCCAAAAATATGGAATAAGGAAGGAAGAGTGCGCATAAAGCCCAAGGGCAGAAACACCTTCTTGAAATGGGCGATTCAACTAGGCAATTCAATTGGAGAATTCGTTGATGTGGATCTCGAGGAAGAAGGAGGCAGCGGGGAAAACACCCTGAGAATCTTGGTGAAAATCGACATAATGCAACCGTTAAAGAGAGGGCTAATGGTCAGAATAGGATCCAAAGCAGAGGAAACTTGGGTAAAGGCATCTTATGAACGTCTCCCAGAATTCTGCTATGGTTGCGGCACGATAGGGCATATTCAACAAGAGTGCGAAGCAGAGAGCAAGAGCGAGGAAGAAAACCTGTATGGAGAATGGTTGAGAGCAACTCCTATTCTCGGAGGTCCGCCGAGGCAAAAACCTCAAAATCCCTTCAGGGGCGGCCCTTGGGGAAGGGGAAGAGGGCGAAGAGCAGCGTTCCAGAATTTTAGAGAGGATTGGAGCTCGGGCAGAAGCAACAGAGAAAACTGGAGAAGAAAAGACCCTGGACCAGATTGTGAAAACGCCCGCAAAGAAGGAGGAAAAGTTGAAGTTTCCGGCGTAAACGAAGAGGCTCCGGCGAGAGGCTCCGATTACAGTCCAGGCGAAACTCCAACGGCTAGTTTTAGGTCAGATAAAGGAAAGGTTGTAGAAGAGTCAGACCAAAACAGTGCAGCAGATAGGGGAAAAGGAAAAGAACCAGAGGATAAAGGTCATATCAGAGTCTCTCTTAAGAATAAAGGACAAAATGGGGAAAAAGAGTACAGACAGACAGTGGGGATTGTGATTAAGGACGACAGTGATGGAATGGAAAAGTCAAAAGGAAAAACGTTCGACCTAAAGCATCCAGCCAATACTAGGCCAACTTTTGGCAATGGGCCACTTGGGCCAAATAAAGAGATTATAAGGGCCATAAAGCAAATCGATCAGAAAGAAAAAAAAGGGACAATAGAACCCGGAGGCCCCCTCGGACAGGAGAATAGAGAGGAACAGGGGAAAAACTTAAGAAAGTGGAAGAGGAGGGCCAGATGTGACTCGGGAAAAGCCTATTCACAAAGCAATTCAGACATATTGATGAGTATGGAGAAGAGAAAACTGGAAAATAGTGCCCAAGGAGAGGAAAAGGAATTAGTTAAAAAAAAACAGTGCATACCTTACTTCGAGGTCGACGAAGGGATATCGGCGGAGGCTGAAATTCAGCCCCGCCGGACGCCATGA MEGQPVSKKGSYMLQKGFLSDQGSEEKEDTQTNMDNQDMEMETANDKDKENPKNTAEEVADKLEKMKITIAERAKVVAIEDDDLEEATEDLQGAVLCRVITLKLINPEIFKTFMPKIWNKEGRVRIKPKGRNTFLKWAIQLGNSIGEFVDVDLEEEGGSGENTLRILVKIDIMQPLKRGLMVRIGSKAEETWVKASYERLPEFCYGCGTIGHIQQECEAESKSEEENLYGEWLRATPILGGPPRQKPQNPFRGGPWGRGRGRRAAFQNFREDWSSGRSNRENWRRKDPGPDCENARKEGGKVEVSGVNEEAPARGSDYSPGETPTASFRSDKGKVVEESDQNSAADRGKGKEPEDKGHIRVSLKNKGQNGEKEYRQTVGIVIKDDSDGMEKSKGKTFDLKHPANTRPTFGNGPLGPNKEIIRAIKQIDQKEKKGTIEPGGPLGQENREEQGKNLRKWKRRARCDSGKAYSQSNSDILMSMEKRKLENSAQGEEKELVKKKQCIPYFEVDEGISAEAEIQPRRTP Homology
BLAST of Lag0002375 vs. NCBI nr
Match: XP_039827601.1 (uncharacterized protein LOC120689378 [Panicum virgatum]) HSP 1 Score: 103.2 bits (256), Expect = 6.9e-18 Identity = 82/243 (33.74%), Postives = 116/243 (47.74%), Query Frame = 0
BLAST of Lag0002375 vs. NCBI nr
Match: XP_021318626.1 (uncharacterized protein LOC110436290 [Sorghum bicolor]) HSP 1 Score: 102.8 bits (255), Expect = 9.0e-18 Identity = 90/287 (31.36%), Postives = 134/287 (46.69%), Query Frame = 0
BLAST of Lag0002375 vs. NCBI nr
Match: TXG48193.1 (hypothetical protein EZV62_027487 [Acer yangbiense]) HSP 1 Score: 101.3 bits (251), Expect = 2.6e-17 Identity = 67/235 (28.51%), Postives = 102/235 (43.40%), Query Frame = 0
BLAST of Lag0002375 vs. NCBI nr
Match: XP_039815364.1 (uncharacterized protein LOC120678302 [Panicum virgatum]) HSP 1 Score: 100.1 bits (248), Expect = 5.8e-17 Identity = 81/243 (33.33%), Postives = 113/243 (46.50%), Query Frame = 0
BLAST of Lag0002375 vs. NCBI nr
Match: TXG60307.1 (hypothetical protein EZV62_014880 [Acer yangbiense]) HSP 1 Score: 99.8 bits (247), Expect = 7.6e-17 Identity = 61/195 (31.28%), Postives = 92/195 (47.18%), Query Frame = 0
BLAST of Lag0002375 vs. ExPASy TrEMBL
Match: A0A2N9GHD2 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26712 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 9.7e-18 Identity = 58/198 (29.29%), Postives = 105/198 (53.03%), Query Frame = 0
BLAST of Lag0002375 vs. ExPASy TrEMBL
Match: A0A5C7GU64 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027487 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.3e-17 Identity = 67/235 (28.51%), Postives = 102/235 (43.40%), Query Frame = 0
BLAST of Lag0002375 vs. ExPASy TrEMBL
Match: A0A5C7HT75 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_014880 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 3.7e-17 Identity = 61/195 (31.28%), Postives = 92/195 (47.18%), Query Frame = 0
BLAST of Lag0002375 vs. ExPASy TrEMBL
Match: A0A1Z5S941 (CCHC-type domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3001G347001 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.1e-16 Identity = 56/140 (40.00%), Postives = 77/140 (55.00%), Query Frame = 0
BLAST of Lag0002375 vs. ExPASy TrEMBL
Match: A0A5C7I3H2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_011067 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.8e-16 Identity = 60/187 (32.09%), Postives = 103/187 (55.08%), Query Frame = 0
BLAST of Lag0002375 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding ) HSP 1 Score: 47.0 bits (110), Expect = 5.5e-05 Identity = 25/85 (29.41%), Postives = 40/85 (47.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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