Lag0002375 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0002375
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr4: 42252450 .. 42254203 (-)
RNA-Seq ExpressionLag0002375
SyntenyLag0002375
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGACAACCTGTAAGCAAGAAGGGCAGCTACATGCTGCAAAAGGGATTCCTGAGTGACCAAGGTAGCGAAGAAAAAGAAGACACACAAACAAACATGGATAACCAGGATATGGAGATGGAGACGGCAAACGACAAAGATAAGGAAAATCCAAAAAATACAGCAGAAGAGGTTGCAGACAAACTCGAAAAAATGAAGATAACAATCGCAGAAAGAGCCAAAGTAGTGGCTATTGAGGATGACGACCTTGAGGAAGCGACAGAAGACCTCCAAGGGGCAGTATTATGCAGAGTGATCACTTTAAAGCTTATCAATCCAGAAATTTTCAAAACATTCATGCCAAAAATATGGAATAAGGAAGGAAGAGTGCGCATAAAGCCCAAGGGCAGAAACACCTTCTTGTGTGAATTTAACAACTCTCATGAGAAGGAAAGAATAAAAAAAGGGGGCCTTGGAACTACGACAAAGCTCTATTAGTTATGGAAGAGGCGCAAGGAGCTAGCAGGATCTCAACAACAGCATTCAGGTATGTGAGTTTCTGGATTCACATACATGACTTACCTATGGTTTGCCATCGCAGGAAATGGGCGATTCAACTAGGCAATTCAATTGGAGAATTCGTTGATGTGGATCTCGAGGAAGAAGGAGGCAGCGGGGAAAACACCCTGAGAATCTTGGTGAAAATCGACATAATGCAACCGTTAAAGAGAGGGCTAATGGTCAGAATAGGATCCAAAGCAGAGGAAACTTGGGTAAAGGCATCTTATGAACGTCTCCCAGAATTCTGCTATGGTTGCGGCACGATAGGGCATATTCAACAAGAGTGCGAAGCAGAGAGCAAGAGCGAGGAAGAAAACCTGTATGGAGAATGGTTGAGAGCAACTCCTATTCTCGGAGGTCCGCCGAGGCAAAAACCTCAAAATCCCTTCAGGGGCGGCCCTTGGGGAAGGGGAAGAGGGCGAAGAGCAGCGTTCCAGAATTTTAGAGAGGATTGGAGCTCGGGCAGAAGCAACAGAGAAAACTGGAGAAGAAAAGACCCTGGACCAGATTGTGAAAACGCCCGCAAAGAAGGAGGAAAAGTTGAAGTTTCCGGCGTAAACGAAGAGGCTCCGGCGAGAGGCTCCGATTACAGTCCAGGCGAAACTCCAACGGCTAGTTTTAGGTCAGATAAAGGAAAGGTTGTAGAAGAGTCAGACCAAAACAGTGCAGCAGATAGGGGAAAAGGAAAAGAACCAGAGGATAAAGGTCATATCAGAGTCTCTCTTAAGAATAAAGGACAAAATGGGGAAAAAGAGTACAGACAGACAGTGGGGATTGTGATTAAGGACGACAGTGATGGAATGGAAAAGTCAAAAGGAAAAACGTTCGACCTAAAGCATCCAGCCAATACTAGGCCAACTTTTGGCAATGGGCCACTTGGGCCAAATAAAGAGATTATAAGGGCCATAAAGCAAATCGATCAGAAAGAAAAAAAAGGGACAATAGAACCCGGAGGCCCCCTCGGACAGGAGAATAGAGAGGAACAGGGGAAAAACTTAAGAAAGTGGAAGAGGAGGGCCAGATGTGACTCGGGAAAAGCCTATTCACAAAGCAATTCAGACATATTGATGAGTATGGAGAAGAGAAAACTGGAAAATAGTGCCCAAGGAGAGGAAAAGGAATTAGTTAAAAAAAAACAGTGCATACCTTACTTCGAGGTCGACGAAGGGATATCGGCGGAGGCTGAAATTCAGCCCCGCCGGACGCCATGA

mRNA sequence

ATGGAGGGACAACCTGTAAGCAAGAAGGGCAGCTACATGCTGCAAAAGGGATTCCTGAGTGACCAAGGTAGCGAAGAAAAAGAAGACACACAAACAAACATGGATAACCAGGATATGGAGATGGAGACGGCAAACGACAAAGATAAGGAAAATCCAAAAAATACAGCAGAAGAGGTTGCAGACAAACTCGAAAAAATGAAGATAACAATCGCAGAAAGAGCCAAAGTAGTGGCTATTGAGGATGACGACCTTGAGGAAGCGACAGAAGACCTCCAAGGGGCAGTATTATGCAGAGTGATCACTTTAAAGCTTATCAATCCAGAAATTTTCAAAACATTCATGCCAAAAATATGGAATAAGGAAGGAAGAGTGCGCATAAAGCCCAAGGGCAGAAACACCTTCTTGAAATGGGCGATTCAACTAGGCAATTCAATTGGAGAATTCGTTGATGTGGATCTCGAGGAAGAAGGAGGCAGCGGGGAAAACACCCTGAGAATCTTGGTGAAAATCGACATAATGCAACCGTTAAAGAGAGGGCTAATGGTCAGAATAGGATCCAAAGCAGAGGAAACTTGGGTAAAGGCATCTTATGAACGTCTCCCAGAATTCTGCTATGGTTGCGGCACGATAGGGCATATTCAACAAGAGTGCGAAGCAGAGAGCAAGAGCGAGGAAGAAAACCTGTATGGAGAATGGTTGAGAGCAACTCCTATTCTCGGAGGTCCGCCGAGGCAAAAACCTCAAAATCCCTTCAGGGGCGGCCCTTGGGGAAGGGGAAGAGGGCGAAGAGCAGCGTTCCAGAATTTTAGAGAGGATTGGAGCTCGGGCAGAAGCAACAGAGAAAACTGGAGAAGAAAAGACCCTGGACCAGATTGTGAAAACGCCCGCAAAGAAGGAGGAAAAGTTGAAGTTTCCGGCGTAAACGAAGAGGCTCCGGCGAGAGGCTCCGATTACAGTCCAGGCGAAACTCCAACGGCTAGTTTTAGGTCAGATAAAGGAAAGGTTGTAGAAGAGTCAGACCAAAACAGTGCAGCAGATAGGGGAAAAGGAAAAGAACCAGAGGATAAAGGTCATATCAGAGTCTCTCTTAAGAATAAAGGACAAAATGGGGAAAAAGAGTACAGACAGACAGTGGGGATTGTGATTAAGGACGACAGTGATGGAATGGAAAAGTCAAAAGGAAAAACGTTCGACCTAAAGCATCCAGCCAATACTAGGCCAACTTTTGGCAATGGGCCACTTGGGCCAAATAAAGAGATTATAAGGGCCATAAAGCAAATCGATCAGAAAGAAAAAAAAGGGACAATAGAACCCGGAGGCCCCCTCGGACAGGAGAATAGAGAGGAACAGGGGAAAAACTTAAGAAAGTGGAAGAGGAGGGCCAGATGTGACTCGGGAAAAGCCTATTCACAAAGCAATTCAGACATATTGATGAGTATGGAGAAGAGAAAACTGGAAAATAGTGCCCAAGGAGAGGAAAAGGAATTAGTTAAAAAAAAACAGTGCATACCTTACTTCGAGGTCGACGAAGGGATATCGGCGGAGGCTGAAATTCAGCCCCGCCGGACGCCATGA

Coding sequence (CDS)

ATGGAGGGACAACCTGTAAGCAAGAAGGGCAGCTACATGCTGCAAAAGGGATTCCTGAGTGACCAAGGTAGCGAAGAAAAAGAAGACACACAAACAAACATGGATAACCAGGATATGGAGATGGAGACGGCAAACGACAAAGATAAGGAAAATCCAAAAAATACAGCAGAAGAGGTTGCAGACAAACTCGAAAAAATGAAGATAACAATCGCAGAAAGAGCCAAAGTAGTGGCTATTGAGGATGACGACCTTGAGGAAGCGACAGAAGACCTCCAAGGGGCAGTATTATGCAGAGTGATCACTTTAAAGCTTATCAATCCAGAAATTTTCAAAACATTCATGCCAAAAATATGGAATAAGGAAGGAAGAGTGCGCATAAAGCCCAAGGGCAGAAACACCTTCTTGAAATGGGCGATTCAACTAGGCAATTCAATTGGAGAATTCGTTGATGTGGATCTCGAGGAAGAAGGAGGCAGCGGGGAAAACACCCTGAGAATCTTGGTGAAAATCGACATAATGCAACCGTTAAAGAGAGGGCTAATGGTCAGAATAGGATCCAAAGCAGAGGAAACTTGGGTAAAGGCATCTTATGAACGTCTCCCAGAATTCTGCTATGGTTGCGGCACGATAGGGCATATTCAACAAGAGTGCGAAGCAGAGAGCAAGAGCGAGGAAGAAAACCTGTATGGAGAATGGTTGAGAGCAACTCCTATTCTCGGAGGTCCGCCGAGGCAAAAACCTCAAAATCCCTTCAGGGGCGGCCCTTGGGGAAGGGGAAGAGGGCGAAGAGCAGCGTTCCAGAATTTTAGAGAGGATTGGAGCTCGGGCAGAAGCAACAGAGAAAACTGGAGAAGAAAAGACCCTGGACCAGATTGTGAAAACGCCCGCAAAGAAGGAGGAAAAGTTGAAGTTTCCGGCGTAAACGAAGAGGCTCCGGCGAGAGGCTCCGATTACAGTCCAGGCGAAACTCCAACGGCTAGTTTTAGGTCAGATAAAGGAAAGGTTGTAGAAGAGTCAGACCAAAACAGTGCAGCAGATAGGGGAAAAGGAAAAGAACCAGAGGATAAAGGTCATATCAGAGTCTCTCTTAAGAATAAAGGACAAAATGGGGAAAAAGAGTACAGACAGACAGTGGGGATTGTGATTAAGGACGACAGTGATGGAATGGAAAAGTCAAAAGGAAAAACGTTCGACCTAAAGCATCCAGCCAATACTAGGCCAACTTTTGGCAATGGGCCACTTGGGCCAAATAAAGAGATTATAAGGGCCATAAAGCAAATCGATCAGAAAGAAAAAAAAGGGACAATAGAACCCGGAGGCCCCCTCGGACAGGAGAATAGAGAGGAACAGGGGAAAAACTTAAGAAAGTGGAAGAGGAGGGCCAGATGTGACTCGGGAAAAGCCTATTCACAAAGCAATTCAGACATATTGATGAGTATGGAGAAGAGAAAACTGGAAAATAGTGCCCAAGGAGAGGAAAAGGAATTAGTTAAAAAAAAACAGTGCATACCTTACTTCGAGGTCGACGAAGGGATATCGGCGGAGGCTGAAATTCAGCCCCGCCGGACGCCATGA

Protein sequence

MEGQPVSKKGSYMLQKGFLSDQGSEEKEDTQTNMDNQDMEMETANDKDKENPKNTAEEVADKLEKMKITIAERAKVVAIEDDDLEEATEDLQGAVLCRVITLKLINPEIFKTFMPKIWNKEGRVRIKPKGRNTFLKWAIQLGNSIGEFVDVDLEEEGGSGENTLRILVKIDIMQPLKRGLMVRIGSKAEETWVKASYERLPEFCYGCGTIGHIQQECEAESKSEEENLYGEWLRATPILGGPPRQKPQNPFRGGPWGRGRGRRAAFQNFREDWSSGRSNRENWRRKDPGPDCENARKEGGKVEVSGVNEEAPARGSDYSPGETPTASFRSDKGKVVEESDQNSAADRGKGKEPEDKGHIRVSLKNKGQNGEKEYRQTVGIVIKDDSDGMEKSKGKTFDLKHPANTRPTFGNGPLGPNKEIIRAIKQIDQKEKKGTIEPGGPLGQENREEQGKNLRKWKRRARCDSGKAYSQSNSDILMSMEKRKLENSAQGEEKELVKKKQCIPYFEVDEGISAEAEIQPRRTP
Homology
BLAST of Lag0002375 vs. NCBI nr
Match: XP_039827601.1 (uncharacterized protein LOC120689378 [Panicum virgatum])

HSP 1 Score: 103.2 bits (256), Expect = 6.9e-18
Identity = 82/243 (33.74%), Postives = 116/243 (47.74%), Query Frame = 0

Query: 138 AIQLGNSIGEFVDVDLEEEGGSGENTLRILVKIDIMQPLKRGLMVRIGSKAEETWVKASY 197
           AIQ+G  +GEF++VDLE +  +    LR+ V+I+I +PL+RG+M+ +G  A+E W   +Y
Sbjct: 141 AIQIGEELGEFMEVDLENDVFAAGRFLRVKVRIEIEKPLRRGIMIDVGEGAQERWCPITY 200

Query: 198 ERLPEFCYGCGTIGHIQQECEAESKSEEENLYGEWLRATP---ILGGPPRQKPQNPFRG- 257
           E LP+FCY CG IGH  + C  +  +EE+  +G  LR  P     GG   +  +N   G 
Sbjct: 201 EFLPDFCYVCGRIGHTDKACLTKLAAEEQAPFGRELRYIPPKKKFGGESWRSQENRRSGG 260

Query: 258 ------GPW------GRGRGRRAAFQNFREDWSSGRSNRENWRRKDPGPDCENARKEGGK 317
                 GPW      GRG G R             RS+  +WR+ D G   E  R +G +
Sbjct: 261 GRSGGSGPWFSGGSGGRGVGGRT------------RSDALSWRKDDMG---EKTRGKGDE 320

Query: 318 VEVSGVNEEAPARGSDYSPGETPTASFRSDKGKVVEE-------SDQNSAADRGKGKEPE 358
            EV+             S  + P    + DK K   E        D+  AA  G GK  E
Sbjct: 321 EEVNSP-----------SKMDLPATHEKGDKAKKCLEDALAEMSQDEKDAAAGGSGKR-E 356

BLAST of Lag0002375 vs. NCBI nr
Match: XP_021318626.1 (uncharacterized protein LOC110436290 [Sorghum bicolor])

HSP 1 Score: 102.8 bits (255), Expect = 9.0e-18
Identity = 90/287 (31.36%), Postives = 134/287 (46.69%), Query Frame = 0

Query: 141 LGNSIGEFVDVDLEEEGGSGENTLRILVKIDIMQPLKRGLMVRIGSKAEETWVKASYERL 200
           LG  IG F +VD+ E+G +    LRI V IDI +PL RG+ V++G    E W   +YE L
Sbjct: 144 LGEKIGFFKEVDVGEDGTAVGRVLRIKVLIDIRKPLMRGITVKVGDPEREKWCSFAYEFL 203

Query: 201 PEFCYGCGTIGHIQQECEAESKSEEENLYGEWLRATPIL---GGPPRQKPQNPFRGGPW- 260
           P+FCY CG IGHI + C + S+S E   +   LR  P      G   ++   P   GPW 
Sbjct: 204 PDFCYTCGLIGHIDKHCPSPSESGEPQQFSRNLRFIPEKRRGEGTGERRSFGPKPRGPWL 263

Query: 261 GRGRGRRAAFQNFREDWSSGRSNRE--NWRRKDPGPDCENARKEGGKVEVSGVNEEAPAR 320
           G   G R +F +  + W S +S  +  NWR+       E + + G +V     + E   +
Sbjct: 264 GGSSGSRGSFDSRGDRWGSSKSGSDALNWRKSGE----EKSTETGDEV----TSPEKTLK 323

Query: 321 GSDYSPGETPTASF-----------RSDKGKVVEE--SDQNSAADRGKGKEPEDKGHIRV 380
           G +   G+T  A               DKG ++ E   +++   DR +G        +  
Sbjct: 324 GVEKEDGKTLGAKKPLLPQLEAPVPARDKGSLIVEKGGEEDMKKDRRRGTFK----RLEK 383

Query: 381 SLKNKGQNGEK---EYRQTVGIVIKDDSDGMEKSKGKTFDLKHPANT 406
           S   KG +GEK   E ++ + I  ++  DG++K K  T   K   NT
Sbjct: 384 SRAVKGDSGEKKQPEKKRKMDIDREEQEDGVKKVKA-TEGAKDSQNT 417

BLAST of Lag0002375 vs. NCBI nr
Match: TXG48193.1 (hypothetical protein EZV62_027487 [Acer yangbiense])

HSP 1 Score: 101.3 bits (251), Expect = 2.6e-17
Identity = 67/235 (28.51%), Postives = 102/235 (43.40%), Query Frame = 0

Query: 72  ERAKVVAIEDDDLEEATEDLQGAVLCRVITLKLINPEIFKTFMPKIWNKEGRVRIKPKGR 131
           E A V  I +D +++  ED+   ++ +V+T K +N E FK  + +IWN+ G+V ++  G 
Sbjct: 18  EDAAVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLIEQIWNQFGQVEVELVGE 77

Query: 132 NTFL-------------------------------------------------------- 191
           NTF+                                                        
Sbjct: 78  NTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKLKFNQADFWVQIHDIPIM 137

Query: 192 -------KWAIQLGNSIGEFVDVDLEEEGGSGENTLRILVKIDIMQPLKRGLMVRIGSKA 239
                  KW   L   IGE V++  E     G+  +R+ V++DI +PLKR L +++G   
Sbjct: 138 CMNQRTTKW---LAEYIGEVVEIPTESRECWGK-YVRVKVQVDITKPLKRWLRIKLGKYE 197

BLAST of Lag0002375 vs. NCBI nr
Match: XP_039815364.1 (uncharacterized protein LOC120678302 [Panicum virgatum])

HSP 1 Score: 100.1 bits (248), Expect = 5.8e-17
Identity = 81/243 (33.33%), Postives = 113/243 (46.50%), Query Frame = 0

Query: 138 AIQLGNSIGEFVDVDLEEEGGSGENTLRILVKIDIMQPLKRGLMVRIGSKAEETWVKASY 197
           AIQ+G  +GEF++VDLE +  +    LR+ V+I+I +PL+RG+M+ +G  A+E W   +Y
Sbjct: 78  AIQIGEELGEFMEVDLENDEFAAGRFLRVKVRIEIEKPLRRGIMIDVGEGAQERWCPITY 137

Query: 198 ERLPEFCYGCGTIGHIQQECEAESKSEEENLYGEWLRATP---ILGGPPRQKPQNPFRG- 257
           E LP+FCY CG IGH  + C  +  + E+  +G  LR  P     GG   +  +N   G 
Sbjct: 138 EFLPDFCYVCGRIGHTDKACLTKLAAGEQAPFGRELRYIPPKKKFGGESWRSQENRRSGG 197

Query: 258 ------GPW------GRGRGRRAAFQNFREDWSSGRSNRENWRRKDPGPDCENARKEGGK 317
                 GPW      GRG G R             RS+  +WR+ D G       K  GK
Sbjct: 198 GRSGGSGPWFSGGSGGRGVGGRT------------RSDALSWRKDDMG------EKTSGK 257

Query: 318 VEVSGVNEEAPARGSDYSPGETPTASFRSDKGKVVEE-------SDQNSAADRGKGKEPE 358
            +   VN          S  + P    + DK K   E        D+  AA  G GK  E
Sbjct: 258 GDEEEVNSP--------SKMDLPATHEKGDKAKKCLEDALAEMSQDEKDAAAGGSGKR-E 293

BLAST of Lag0002375 vs. NCBI nr
Match: TXG60307.1 (hypothetical protein EZV62_014880 [Acer yangbiense])

HSP 1 Score: 99.8 bits (247), Expect = 7.6e-17
Identity = 61/195 (31.28%), Postives = 92/195 (47.18%), Query Frame = 0

Query: 85  EEATEDLQGAVLCRVITLKLINPEIFKTFMPKIWNKEGRVRIKPKGRNTFLKWAIQLGN- 144
           E+  ED++  ++ +V+  K +N E FK  + +IW+  G V I+    N F+ + I +G+ 
Sbjct: 31  EDGAEDVERCLVGKVLAGKKVNREAFKRIIEQIWSPFGHVEIELVSDNVFMFYFINIGSG 90

Query: 145 ----------------------------------SIGEFVDVDLEEEGGSGENTLRILVK 204
                                              IGE VD+   E     E  +R+ V+
Sbjct: 91  NIAQLAFNKADFWVQIHEIPILCMNRKTEKWLAEQIGEVVDIP-SESRECWEKYMRVKVR 150

Query: 205 IDIMQPLKRGLMVRIGSKAEETWVKASYERLPEFCYGCGTIGH-----IQQECEAESKSE 240
           IDI +PLKR L +++G   E T V   YERLPEFC+ CG IGH     I +E    +   
Sbjct: 151 IDITKPLKRWLRLKLGKTEEVTRVSLKYERLPEFCFACGKIGHGIKVCIDEEARKMAVEG 210

BLAST of Lag0002375 vs. ExPASy TrEMBL
Match: A0A2N9GHD2 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26712 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 9.7e-18
Identity = 58/198 (29.29%), Postives = 105/198 (53.03%), Query Frame = 0

Query: 56  AEEVADKLEKMKITIAERAKVVAIEDDDLEEATEDLQGAVLCRVITLKLINPEIFKTFMP 115
           AEE+A+  ++M+++ +E++  + +    ++++ ++ + ++L R++T +  N E FK  + 
Sbjct: 2   AEELAELCKRMRLSDSEKSN-LKLTTGKIQQSKKEAKYSLLFRLLTTRSFNGEAFKGTIR 61

Query: 116 KIWNKEGRVRIKPKGRNTFL----------KWAIQLGNSIGEFVDVDLEEEGGSGENTLR 175
            +W     + I+    N F+          +    +GN IG  ++VD+ E+G + +  LR
Sbjct: 62  SLWASPRSLTIRDIEDNLFMAIFTKGDDMERVGEDIGNHIGRLIEVDVPEKGFAWDRYLR 121

Query: 176 ILVKIDIMQPLKRGLMVRIGSKAEETWVKASYERLPEFCYGCGTIGHIQQEC-EAESKSE 235
           I V++DI  PL RG ++      +  WV   YE LP FCY CG +GH   EC E      
Sbjct: 122 IRVELDITNPLLRGKILE-DDNGKPYWVDFRYEHLPIFCYRCGRVGHSGNECLEGRHSGG 181

Query: 236 EENL----YGEWLRATPI 239
           + N+    +G WLRA P+
Sbjct: 182 DPNVSTDRFGSWLRAVPV 197

BLAST of Lag0002375 vs. ExPASy TrEMBL
Match: A0A5C7GU64 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027487 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-17
Identity = 67/235 (28.51%), Postives = 102/235 (43.40%), Query Frame = 0

Query: 72  ERAKVVAIEDDDLEEATEDLQGAVLCRVITLKLINPEIFKTFMPKIWNKEGRVRIKPKGR 131
           E A V  I +D +++  ED+   ++ +V+T K +N E FK  + +IWN+ G+V ++  G 
Sbjct: 18  EDAAVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLIEQIWNQFGQVEVELVGE 77

Query: 132 NTFL-------------------------------------------------------- 191
           NTF+                                                        
Sbjct: 78  NTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKLKFNQADFWVQIHDIPIM 137

Query: 192 -------KWAIQLGNSIGEFVDVDLEEEGGSGENTLRILVKIDIMQPLKRGLMVRIGSKA 239
                  KW   L   IGE V++  E     G+  +R+ V++DI +PLKR L +++G   
Sbjct: 138 CMNQRTTKW---LAEYIGEVVEIPTESRECWGK-YVRVKVQVDITKPLKRWLRIKLGKYE 197

BLAST of Lag0002375 vs. ExPASy TrEMBL
Match: A0A5C7HT75 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_014880 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.7e-17
Identity = 61/195 (31.28%), Postives = 92/195 (47.18%), Query Frame = 0

Query: 85  EEATEDLQGAVLCRVITLKLINPEIFKTFMPKIWNKEGRVRIKPKGRNTFLKWAIQLGN- 144
           E+  ED++  ++ +V+  K +N E FK  + +IW+  G V I+    N F+ + I +G+ 
Sbjct: 31  EDGAEDVERCLVGKVLAGKKVNREAFKRIIEQIWSPFGHVEIELVSDNVFMFYFINIGSG 90

Query: 145 ----------------------------------SIGEFVDVDLEEEGGSGENTLRILVK 204
                                              IGE VD+   E     E  +R+ V+
Sbjct: 91  NIAQLAFNKADFWVQIHEIPILCMNRKTEKWLAEQIGEVVDIP-SESRECWEKYMRVKVR 150

Query: 205 IDIMQPLKRGLMVRIGSKAEETWVKASYERLPEFCYGCGTIGH-----IQQECEAESKSE 240
           IDI +PLKR L +++G   E T V   YERLPEFC+ CG IGH     I +E    +   
Sbjct: 151 IDITKPLKRWLRLKLGKTEEVTRVSLKYERLPEFCFACGKIGHGIKVCIDEEARKMAVEG 210

BLAST of Lag0002375 vs. ExPASy TrEMBL
Match: A0A1Z5S941 (CCHC-type domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3001G347001 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-16
Identity = 56/140 (40.00%), Postives = 77/140 (55.00%), Query Frame = 0

Query: 141 LGNSIGEFVDVDLEEEGGSGENTLRILVKIDIMQPLKRGLMVRIGSKAEETWVKASYERL 200
           LGN IG  + VD E++G +    LRI VKIDI +PL RG+++      ++ W    YE L
Sbjct: 10  LGNRIGRALAVDTEDDGSAVGGFLRIKVKIDIRKPLMRGILLERAEGEDDCWCPIRYEYL 69

Query: 201 PEFCYGCGTIGHIQQECEAESKSEEE---NLYGEWLRATPIL---GGPPRQKPQNPFRGG 260
           P FCYGCG +GH+++EC  +S  EEE     +G+WLR TP      G  RQ+       G
Sbjct: 70  PNFCYGCGLLGHVEKEC--DSCVEEEVGFKQFGDWLRVTPTRWKGQGDQRQRWSEGGSSG 129

Query: 261 PWGRGRGRRAAFQNFREDWS 275
               GR R +   +F +D S
Sbjct: 130 SGKFGRSRESGKLSFAQDHS 147

BLAST of Lag0002375 vs. ExPASy TrEMBL
Match: A0A5C7I3H2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_011067 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.8e-16
Identity = 60/187 (32.09%), Postives = 103/187 (55.08%), Query Frame = 0

Query: 66  MKITIAERAKVVAIEDDDL------EEATED----LQGAVLCRVITLKLINPEIFKTFMP 125
           M+  IA+  + +++ D+D+      EE   D    +   ++ +V++ K +N E FK  + 
Sbjct: 1   MESEIAKLYENLSLADEDVAIHEMPEEVHRDGVANVDRCLVGKVLSGKKVNIEAFKGLIE 60

Query: 126 KIWNKEGRVRIKPKGRNTFL--KWAIQLGNSIGEFVDVDLEEEGGSGENTLRILVKIDIM 185
           ++WN+ G V I+  G N F+  KW   L   +GE +++ +E +   G+  +R+ V I+I 
Sbjct: 61  QLWNQFGAVEIESLGHNIFITAKW---LAEQLGEVIEIPMEAKDCWGK-FMRVKVLIEIS 120

Query: 186 QPLKRGLMVRIGSKAEETWVKASYERLPEFCYGCGTIGHIQQEC-EAESK----SEEENL 236
           +PLKR L +++        V   YERLP+FCY CG IGH+ ++C + E+K    S     
Sbjct: 121 KPLKRWLRLKLDKSDNIVLVGLKYERLPQFCYACGIIGHVIKDCLDTEAKTAALSGSTTR 180

BLAST of Lag0002375 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 47.0 bits (110), Expect = 5.5e-05
Identity = 25/85 (29.41%), Postives = 40/85 (47.06%), Query Frame = 0

Query: 141 LGNSIGEFVDVDLEEEGGSGENTLRILVKIDIMQPLKRGLMVRIGSKAEETWVKASYERL 200
           + +++GE V +D  EE  S    +R+ V++D  +PL+    VR  S+ E   +   YE+L
Sbjct: 143 IASTLGEVVAMDFNEETTSQITFIRVKVRMDFTEPLRFFRRVRFASR-ERAMIGFEYEKL 202

Query: 201 PEFCYGCGTIGHIQQECEAESKSEE 226
              C  C  + H    C      EE
Sbjct: 203 QRVCTNCCRVNHQVSHCPYVVHQEE 226

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_039827601.16.9e-1833.74uncharacterized protein LOC120689378 [Panicum virgatum][more]
XP_021318626.19.0e-1831.36uncharacterized protein LOC110436290 [Sorghum bicolor][more]
TXG48193.12.6e-1728.51hypothetical protein EZV62_027487 [Acer yangbiense][more]
XP_039815364.15.8e-1733.33uncharacterized protein LOC120678302 [Panicum virgatum][more]
TXG60307.17.6e-1731.28hypothetical protein EZV62_014880 [Acer yangbiense][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9GHD29.7e-1829.29CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2671... [more]
A0A5C7GU641.3e-1728.51CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02748... [more]
A0A5C7HT753.7e-1731.28Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_014880 PE=4 SV=1[more]
A0A1Z5S9411.1e-1640.00CCHC-type domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3001G347... [more]
A0A5C7I3H21.8e-1632.09CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01106... [more]
Match NameE-valueIdentityDescription
AT5G36228.15.5e-0529.41nucleic acid binding;zinc ion binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 27..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..304
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..417
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..475
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 136..298
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 170..218
e-value: 2.8E-12
score: 46.1
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 136..298
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 204..217
score: 9.372511

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0002375.1Lag0002375.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding