Lag0002343 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0002343
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protein OSB2, chloroplastic-like
Location	chr4: 41890759 .. 41896021 (+)
RNA-Seq Expression	Lag0002343
Synteny	Lag0002343

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAATGGCGCTAGAGCAAACCCTAACTCTTTCGTCATCGTTGTTATCAAAAGACTCCATCTTCTCCATCCCTAGAAACAAATTACGAATCGCTTCTTTCTCCCCATTTCTCTCCCATCAAAACGCTCCTAATAATAAACAGCTCCGATTCGCAACTCGTTTCCCAAAATGCTCGGCTATGGAAAACTACGGCAATTACTCTGTAACCTACCCTAAACCTTCCGAAATTCCATGGAAGAAGGAGCTCAGTAACTCCGTGAGTCTCATCGGGACCGTTGGTATGCCTGTGGAGCTCAAGCACCTAGCATCCGGCAAGGATGTGGCTTGGACGCGACTCGCCGTTTGGAAGTCCTCTACTGAAACATCTTGGTACTTATCTGTTATTTCTTTTCGAAATGGGGTTTAGTATGGTTGCATTTCTGTAGAAGATTGAATGATAATGTGATTTTTTTTGGGTGAGGTGATGAAATTATTTGCAAAGGTTGAAGATTAAGCTCTTGAGTAGTTAAAGATGAGATGTTAAGAATATGGAAATTTTAGGACCATGGTTGATATAGACTTCATTTCTGTTTACATGGGCTTGGCATTCCGAAATTGGTGTCCCAATTTCAGTAGGATGTAGAAACCATATGAATCTTCAAACGAACGAACTTATTTCATATAAACGACGGCTTTCCTTGTTTAGTTACGCAAATGCCTCTGTTTGGGCGTTGAGAGGGAGGATGTGTGGAATTTGTCACATTTCAGAATTCTTAACAATGAAAGCTTATTATTGTTATGTTATTTTGTAAACTTTGGCTTCTTTTTTGGGTCTGTCTTTTTTATAGCTTTTGCTCTATACTTTAATTCTATAATAAAAGCTGGTTTTAAAGTTGAAAAAGAGTATGTTAATGTATAAAAAAAAATTTACTGCTTTTCTGTTGTAGGAGTTTTACTTATTTCATTTTGCTGAATCTACCCTACTATAAAGCCAACTAATCAATTGTCATTTGAAGCAAATATTATATGCTAGCACATCCTAGAATGATTTCATCCAAACCATCTCTAGACTCTGTGACCCATATCAGCTGCCAAATCGTTAGCCATTTCACCTTATTTAACTAATTAATCATCCAACATTTTTGTAATTCTGTTATTTGTGTCAGCAGAATTTGGTAAGGTAATAGAGTAGCAATATGCTTGGTATGAAGTACTCTGGGTTGGCCTAATTGTCACTGGAACAGGTAAAAAAGTAAGAAGCCATTGGTGTAGTTCTTCCTACATGGGCATCTTTTATAAGGCCTTTCTCCACCCCTCTGGAAATCATTTTGCTCAAAATTTCAATCACTATAAATAAGAGGAAATGAGAAAGAGGGTCATCCTATCAAATTTTCCTTGTACTTGGTAGTTCACTCATTTTCCTATTCGAGGCCTTTGAGTTGATCTTATGAATACTCATTGCTAAACTGGTGGGTTCATGCTTTAGACTTCGTGGGAATCAAACAGATGTGTCTCATTCAGCTGGTTGGTGGCCCGCCCAAGGACTCTTACATTCTTCTAAATCTCTTTCTCTTGGGCCATTCTTCTGAAGACAAGAAGGAGAGCTTATGGAAGAATCTAGTTCATGCTCTTTTGTGGTTGGTGTGGTTAGAAAGAAATCAGGGGATTTTTGGATCTAAGGAAAATTCCTATGCAATCTTTGCCTCTCTTTCACAAGTTCATCCTCTACCTTCTTTTATTTTAATTATTTTAATTTTTAATTTCATGCATCAATTGAATTGTTTCTTTTTTTAAAAAAAAAAAAATCGTACCTCTCCAAAGACGTTTCAATTGTACCCTCCCAAAGATTGACATCCTTTAGGAGATTATGTTTGATAACCTCCTAACTCTCTAGAAAAATGATGTCAACAAGCCATCAAGATCAAGAGCTTTACAACCATCAAAACTAAAGGAAGATTCTTGTGGCAAGCCGGCATGTTTGCGCTTTTGTGAAACTTGTGGGGGGAAAGAAACAATAGTACTTTTGGTCCCTTACTAGATACCATGTCTATATGTGGGCTTCGATCACGAAATTATTTTGTAATTATCTCTTAGGTCTCATTTTGCTTGATTGGAGTTCCTTCTAGTGATAGGTCTCCCTTTTGTGGGCCAAGTTTTTTTTTTTTTTTTTGTATGTCCTTGTATTCTTTCATTTTTCTCAATGAAAAGTTGGTTTTTCATTTATTAAAAAAAAAACCCTCAAAACAAAAGATCACTTTCTTAATCTTCTCCAAAGTAAAAGGTTAATTGAGGGTTTCTCCTTCCTTTTCACTAAAGGAAAAATAAGATAATACTTTAGCTTTGATCTTGTTGTCACGACCTAAACATCTCCCATCTTCGATATCTGTCACTAATTAGGTTCCTAACGCTCTAAAGTTTTCATATTATGTAAAAAAGGAGATTTTTTCTTTGATTCATTTCACACGAGATTTTGCCCTCCAACTAGCCTTCTCCCACTGAATAACCAACCACGACTCTTTTGGTCTACCCCTTTCTTCTCAACCTTAGCCATTAAGATTGCCTCTTTTAATCCAAATCATCCAAAGTGTCGTCTTGATGATAATTTCTTCATTTGTCATCTTGCTAATAATCTCTTCTCTTGTGCACAACTTGATTGTCCCCCAAAACATTCAAATCCTACTCGTCTTTAATTTTTACCTTTTAAAATTGTCACTTAACGTGTCGGTGTTCTACCATTTTAGAACTTGACGTGTCATCATGGTTGTGTCACACTATATTCTCGTCATCTAGAAATTTTCCATTGAGCCTTATAGATCTAGTATCTCTACCTCCCTTTAATTTTTATGGAAAAAATCTAATGACATTAAAATCACCTGCAAAATACCAAGCTGCTTCGCATAGTCTATAAATTTCCCAACAGAAAGGCTCCTCTTTCCCCGTCTAGACATGGCAGACCATAATTCTTGAAAGCTATCAAAGAAGTTTGTTGGAATACCAAAAGATGAATCATTAAAGAGAATGATCTAAGAACCACTTCCTGACACAAAATAGAACCAAAGTCCGGCTAGATAATAGGACCACATGAAGAGCCCCATACACCTTTGATTTCTTCCACCCCACCCACATCTTTTACCAAAACTTTTGACTAAACTAGCAGTGCAAGAAAAACGTTTGGTTTCTTGAAGAATACCCACCTCAGGCCTCTTCTGCAGCAAAACCTCCATGATGAGCCTCCTTTTACTTACACCCCAATCCCTAAATTTCTAAGAGGAATCTTCATTAAGACGCTAGGGGGCTCAATGAAGACCTACCAATCTTAGCCAACAAATTTATTAAGTTGGACCACTCTACACTCTTCAAAAGACATATCTAACTGACCCGCCCCTATTGACATACCAGAAAGAAGCCTGGTGGTACTCTGTTATTAGTTAGTGAGCTAAGTCTTTCGGATATGTAGTTACTGTTTGTCACTTTGTTCTACCGCTTGGCATTTCCAAATTCCAATAGCATTTTTTTTTTTTTTGTTAATTTCCCTTTCAACTATTGGTTCCTATCTCATTTTTGTTTTCTAAGATAAGCAACTAGTTACACTGAGAGACAGAGGGGGAAGAAGAAGACGAAGAAGAAATATGCATAACATTGTTGAAAGACTCCTCACTTCTTTCAAGTCAAATTTCGCATGAAGTGCTTACTTTCACTCCTTTGCTCCGCAGAACTTTAAAACTCTAATCTAGAGGGACACGACATGGTATTTCAATCTTCATGTGTTCAAATGTAAAGACAATTAGGACTTAGGAGAGAAGGAATCAGATATAAAAAATAATTGCCTAGTTTTCTTATCCTGATAATCTATGGAGTATGGATATAACTATCCAGATCAATATCTTGCTGGGATTTCCATTTGCCTATTCCAATATCCAGTCGGCCTTTTCAGGATAAATTTAACATTCTGGGATGAATTGGCACATATTGCTTTTCAACACGTCCAGAAAGGCAACCAGATATATGTATCTGGCCGGCTGGTAGCAGATTTAGTTGAAGCTGATGATGGGAAACAGCAAACATACTATAAGGTTTTGCTGTCCTTGTTCAAATTGTTCCATGGTTTTCTGCTCCTTTCCCGATGTAGACACTAATGTTCTCTATCTTTTGCAGGTAGTAGTTCAGCAACTGAATTTTATAGAAAGAAGCAACTCGACAGCACCCAATTATGACCAGGACTCTAGTTCTGTAGTGGCAGGTCTGGGATATTTTTGAATTGAAGACTATAGGTAGGTATGACACTGTATTTTGCTTCAGAATCTTGATATTTGGTGTCCTATCATATTCTTCGCAGGGAGAAAGCTCAGCAATGGTGCCGTTGATAATATGGGGTCAACACAAGAATTATGGCAAGCATTCTTTGCTAATCCCGTGGACTGGTGGGACAATAGGAAGAACAAGGTACTTGATTTATTCTCTTGCAAGATTCAAATATCTTGTTTTTGGATTCAATTGTTCTCATGGACCATCTTGTATTTGCTTGTGCTAGTATGTTTTACTTATATTATATTTTGCTAAGAAACAAGTGGAGCTTTTCATTGATGCATGAAAAAACCTTAGGAACTTACAACAAACTGCATGATATAATAACATACATTTTATGTATGTTATTACTTCTATTGCAGAGAGCAGACCTCTTGAATGGTTGCATTTTCTTATAAGAAACAGTTTCATAGATGGTATGTAATTATGAAAAAGGGAGAGACTAAAAAAAATCTCTTCCAATTAGCTAAAAGAGTATCTAAACTTTAATTGTTGAAAGAAGTATAAAAGCTAAACCGAGTAAGAGCAAAGCAGGAAAGTCATCAACAGATTTTATTTTAGTTATCGTGTCTAAATATTATTATTGATTGTACATATGAAATGGTGGGCCACAATGATTAGAAAAAAGGATTAATAGCCTCATCTTGCTGGCCATTTTAGACATTCAAAAAGGTTACCTTTTGTAAGTATTTGTAGGTTTCTTTCACTATATGATTCACATGATTCCTTGATGAGAGATGATATTCTCACCTTAATGTTAATACATTGGTCTATTGATATTCTACTTGCAGAAGAACCCTAAATATCCAGATTTTAAGCACAAGGACACTGGGGAAGCCTTGTGGGTTGAGGGCAGGTACAATCCACCTTGGGTGAAGTCCCAGCTGGCAATATTGGATATGAGAATGGGTTCTCTTGATGAGCAGGAAGCCAAAATGGCCAACTTTGTAACTAATTTTGATTTCCCATCTTATTAG

mRNA sequence

ATGATAATGGCGCTAGAGCAAACCCTAACTCTTTCGTCATCGTTGTTATCAAAAGACTCCATCTTCTCCATCCCTAGAAACAAATTACGAATCGCTTCTTTCTCCCCATTTCTCTCCCATCAAAACGCTCCTAATAATAAACAGCTCCGATTCGCAACTCGTTTCCCAAAATGCTCGGCTATGGAAAACTACGGCAATTACTCTGTAACCTACCCTAAACCTTCCGAAATTCCATGGAAGAAGGAGCTCAGTAACTCCGTGAGTCTCATCGGGACCGTTGGTATGCCTGTGGAGCTCAAGCACCTAGCATCCGGCAAGGATGTGGCTTGGACGCGACTCGCCGTTTGGAAGTCCTCTACTGAAACATCTTGGATAAATTTAACATTCTGGGATGAATTGGCACATATTGCTTTTCAACACGTCCAGAAAGGCAACCAGATATATGTATCTGGCCGGCTGGTAGCAGATTTAGTTGAAGCTGATGATGGGAAACAGCAAACATACTATAAGGTAGTAGTTCAGCAACTGAATTTTATAGAAAGAAGCAACTCGACAGCACCCAATTATGACCAGGACTCTAGTTCTGTAGTGGCAGGGAGAAAGCTCAGCAATGGTGCCGTTGATAATATGGGGTCAACACAAGAATTATGGCAAGCATTCTTTGCTAATCCCGTGGACTGGTGGGACAATAGGAAGAACAAGAAGAACCCTAAATATCCAGATTTTAAGCACAAGGACACTGGGGAAGCCTTGTGGGTTGAGGGCAGGTACAATCCACCTTGGGTGAAGTCCCAGCTGGCAATATTGGATATGAGAATGGGTTCTCTTGATGAGCAGGAAGCCAAAATGGCCAACTTTGTAACTAATTTTGATTTCCCATCTTATTAG

Coding sequence (CDS)

ATGATAATGGCGCTAGAGCAAACCCTAACTCTTTCGTCATCGTTGTTATCAAAAGACTCCATCTTCTCCATCCCTAGAAACAAATTACGAATCGCTTCTTTCTCCCCATTTCTCTCCCATCAAAACGCTCCTAATAATAAACAGCTCCGATTCGCAACTCGTTTCCCAAAATGCTCGGCTATGGAAAACTACGGCAATTACTCTGTAACCTACCCTAAACCTTCCGAAATTCCATGGAAGAAGGAGCTCAGTAACTCCGTGAGTCTCATCGGGACCGTTGGTATGCCTGTGGAGCTCAAGCACCTAGCATCCGGCAAGGATGTGGCTTGGACGCGACTCGCCGTTTGGAAGTCCTCTACTGAAACATCTTGGATAAATTTAACATTCTGGGATGAATTGGCACATATTGCTTTTCAACACGTCCAGAAAGGCAACCAGATATATGTATCTGGCCGGCTGGTAGCAGATTTAGTTGAAGCTGATGATGGGAAACAGCAAACATACTATAAGGTAGTAGTTCAGCAACTGAATTTTATAGAAAGAAGCAACTCGACAGCACCCAATTATGACCAGGACTCTAGTTCTGTAGTGGCAGGGAGAAAGCTCAGCAATGGTGCCGTTGATAATATGGGGTCAACACAAGAATTATGGCAAGCATTCTTTGCTAATCCCGTGGACTGGTGGGACAATAGGAAGAACAAGAAGAACCCTAAATATCCAGATTTTAAGCACAAGGACACTGGGGAAGCCTTGTGGGTTGAGGGCAGGTACAATCCACCTTGGGTGAAGTCCCAGCTGGCAATATTGGATATGAGAATGGGTTCTCTTGATGAGCAGGAAGCCAAAATGGCCAACTTTGTAACTAATTTTGATTTCCCATCTTATTAG

Protein sequence

MIMALEQTLTLSSSLLSKDSIFSIPRNKLRIASFSPFLSHQNAPNNKQLRFATRFPKCSAMENYGNYSVTYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETSWINLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY

Homology

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BLAST of Lag0002343 vs. NCBI nr
Match: XP_038896738.1 (protein OSB2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 549.3 bits (1414), Expect = 2.0e-152
Identity = 267/295 (90.51%), Postives = 283/295 (95.93%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKDSIFSIPRNKLRIASFSPFLSHQNAPNNKQLRFATRFPKCSA 60
           MIMALEQTLTLSSSLLSK+SIFSIPRN+LRI+SF PFLS  NAP  K LRFATRFPKCSA
Sbjct: 1   MIMALEQTLTLSSSLLSKNSIFSIPRNELRISSFYPFLSGLNAP--KHLRFATRFPKCSA 60

Query: 61  MENYGNYSVTYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSST 120
           MENY +YS TYPKPSEIPWKK+LSNSVSLIGTVGMPVELKHLA+GKDVAWTRLAVWKSST
Sbjct: 61  MENYSSYSPTYPKPSEIPWKKDLSNSVSLIGTVGMPVELKHLATGKDVAWTRLAVWKSST 120

Query: 121 ETSWINLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 180
           ETSWINLTFWDELAH+A QH+QKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE
Sbjct: 121 ETSWINLTFWDELAHVASQHIQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 180

Query: 181 RSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYP 240
           RSNST P+YDQDS+SV+AG+KL +GAVDN+GSTQELWQAFFANPVDWWDNRKNKKNPKYP
Sbjct: 181 RSNSTGPHYDQDSNSVMAGKKLGSGAVDNVGSTQELWQAFFANPVDWWDNRKNKKNPKYP 240

Query: 241 DFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 296
           DFKHKDTGEALWVEGRYNPPWVKSQLA+LDMRM SLD+QEAKMANFVTNFDFPSY
Sbjct: 241 DFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEAKMANFVTNFDFPSY 293

[Close]

BLAST of Lag0002343 vs. NCBI nr
Match: XP_008451268.1 (PREDICTED: protein OSB2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 528.5 bits (1360), Expect = 3.7e-146
Identity = 260/296 (87.84%), Postives = 276/296 (93.24%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKDSIFSIPRNKLRIASFSPFLSHQNAPNNKQLRFATRFPKCSA 60
           M +ALEQTLTLSSS  SK+SIFSIPRN+LRI+SF PF S+ N P  K LRFATRFPKCSA
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPP--KHLRFATRFPKCSA 62

Query: 61  MENYGNYS-VTYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSS 120
           MENY NYS VTYPKPSEIPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSS
Sbjct: 63  MENYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSS 122

Query: 121 TETSWINLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI 180
           TETSWI+LTFWDELAHIA QHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI
Sbjct: 123 TETSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI 182

Query: 181 ERSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKY 240
           ERSNSTAP+YDQDS+S++AGRK S+GAVDN  STQELWQAFFANPVDWWDNRKNKKNPKY
Sbjct: 183 ERSNSTAPHYDQDSNSIMAGRKPSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKNPKY 242

Query: 241 PDFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 296
           PDFKHKDTGEALWVEGRYNPPWVKSQLA+LDMRM SLD+QE KM NFV+NFDFPSY
Sbjct: 243 PDFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of Lag0002343 vs. NCBI nr
Match: KAA0059696.1 (protein OSB2 [Cucumis melo var. makuwa] >TYK26133.1 protein OSB2 [Cucumis melo var. makuwa])

HSP 1 Score: 526.6 bits (1355), Expect = 1.4e-145
Identity = 259/296 (87.50%), Postives = 276/296 (93.24%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKDSIFSIPRNKLRIASFSPFLSHQNAPNNKQLRFATRFPKCSA 60
           M +ALEQTLTLSSS  SK+SIFSIPRN+LRI+SF PF S+ N P  K LRFATRFPKCSA
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPP--KHLRFATRFPKCSA 62

Query: 61  MENYGNYS-VTYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSS 120
           MENY NYS VTYPKPSEIPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSS
Sbjct: 63  MENYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSS 122

Query: 121 TETSWINLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI 180
           TETSWI+LTFWDELAHIA QHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI
Sbjct: 123 TETSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI 182

Query: 181 ERSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKY 240
           ERSNSTAP+YDQDS+S++AGRK S+GAVDN  STQELWQAFFANPVDWWDNRKNKK+PKY
Sbjct: 183 ERSNSTAPHYDQDSNSIMAGRKPSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKSPKY 242

Query: 241 PDFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 296
           PDFKHKDTGEALWVEGRYNPPWVKSQLA+LDMRM SLD+QE KM NFV+NFDFPSY
Sbjct: 243 PDFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of Lag0002343 vs. NCBI nr
Match: XP_004146958.1 (protein OSB2, chloroplastic isoform X1 [Cucumis sativus] >KGN44765.1 hypothetical protein Csa_016591 [Cucumis sativus])

HSP 1 Score: 525.4 bits (1352), Expect = 3.2e-145
Identity = 259/296 (87.50%), Postives = 275/296 (92.91%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKDSIFSIPRNKLRIASFSPFLSHQNAPNNKQLRFATRFPKCSA 60
           M+MALEQTL LSSSL SK+SIFSIPRN+L I+SF PF S+ N P  K LRF   FPKCSA
Sbjct: 1   MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPP--KHLRFPAPFPKCSA 60

Query: 61  MENYGNYS-VTYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSS 120
           MENY NYS VTYPKPS+IPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSS
Sbjct: 61  MENYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSS 120

Query: 121 TETSWINLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI 180
           TETSWI LTFWDELAHIA QHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI
Sbjct: 121 TETSWIGLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI 180

Query: 181 ERSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKY 240
           ERSNSTAP+YDQDS+S++AGRK  +GAVDN GSTQELWQAFFANPVDWWDNRKNKKNPKY
Sbjct: 181 ERSNSTAPHYDQDSNSIMAGRKPGSGAVDNTGSTQELWQAFFANPVDWWDNRKNKKNPKY 240

Query: 241 PDFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 296
           PDFKHKDTGEALWVEGRYNPPWVKSQLA+LDMRMGSLD+QEAKMANFVT+FDFPSY
Sbjct: 241 PDFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMGSLDDQEAKMANFVTSFDFPSY 294

[Close]

BLAST of Lag0002343 vs. NCBI nr
Match: XP_022155802.1 (protein OSB2, chloroplastic-like isoform X1 [Momordica charantia])

HSP 1 Score: 520.4 bits (1339), Expect = 1.0e-143
Identity = 256/295 (86.78%), Postives = 272/295 (92.20%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKDSIFSIPRNKLRIASFSPFLSHQNAPNNKQLRFATRFPKCSA 60
           M+MALEQTL+LSSSLL K ++ SIPRN+ RIAS    LSH +A   K+LRFA RFPKCSA
Sbjct: 1   MVMALEQTLSLSSSLLPKHTLLSIPRNRFRIAS----LSHLDAA--KRLRFARRFPKCSA 60

Query: 61  MENYGNYSVTYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSST 120
           MEN+ NYS +Y KP EIPW KELSNSVSLIGTVG PVE+KHLASGKDVAWTRLAVWKSST
Sbjct: 61  MENFSNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSST 120

Query: 121 ETSWINLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 180
           ETSWINLTFWDELAHIAFQHVQKGNQI+VSGRLVADLVEADDGKQQTYYKVVVQQLNFIE
Sbjct: 121 ETSWINLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 180

Query: 181 RSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYP 240
           RS STAP++DQDS+S+VAGRKL NGA DNMGSTQELWQAFFANPVDWWDNRKNKKNPKYP
Sbjct: 181 RSISTAPHHDQDSNSIVAGRKLGNGAADNMGSTQELWQAFFANPVDWWDNRKNKKNPKYP 240

Query: 241 DFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 296
           DFKHKDTGEALWVEGRYNPPWVKSQLA+LDMRMGSLDEQEAKMANFVTN DFPSY
Sbjct: 241 DFKHKDTGEALWVEGRYNPPWVKSQLAVLDMRMGSLDEQEAKMANFVTNLDFPSY 289

[Close]

BLAST of Lag0002343 vs. ExPASy Swiss-Prot
Match: Q9SX99 (Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.4e-26
Identity = 74/217 (34.10%), Postives = 112/217 (51.61%), Query Frame = 0


Query: 71  YPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWK--SSTETSWINLT 130
           + KP     K  L NSVSL+G V   +++ +    +   +T L V    +   +  I+L 
Sbjct: 42  FKKPLSTKLKFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLR 101

Query: 131 FWDELAHIAFQHVQKGNQIYVSGRLVADLVEADD--GKQQTYYKVVVQQLNFIERSNSTA 190
            WD +A     H++  + I VSGRL +    + D        Y+V V ++N++    +  
Sbjct: 102 MWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYV----AAP 161

Query: 191 PNYDQDSS-SVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHK 250
           P++  DS  S     K  +   ++      LWQ FF+NP DWWDNR+NKKNPK PDFKHK
Sbjct: 162 PSHVLDSQISKNPKTKTEDDIEESKKDEIYLWQVFFSNPYDWWDNRRNKKNPKQPDFKHK 221

Query: 251 DTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAK 283
           DTGEALW+     P W+  +L + D +    DE++ +
Sbjct: 222 DTGEALWLCSDL-PDWITRRLELFDQKNRFYDEEKTR 253

[Close]

BLAST of Lag0002343 vs. ExPASy Swiss-Prot
Match: Q8GXH3 (Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2)

HSP 1 Score: 106.7 bits (265), Expect = 4.6e-22
Identity = 72/209 (34.45%), Postives = 111/209 (53.11%), Query Frame = 0


Query: 72  PKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETS-WINLTFW 131
           P+P+EI ++ E++N V+LIG V  PV+ +  + GK  A T ++   +S  +  WI + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 132 DELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE-RSNSTAPNY 191
            +LA  A ++V K +QI+VSG+L  D    +    Q   +V+VQ LNFI+  S S +P  
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 192 DQDSS-SVVAGRKLSNGAVDN---MGSTQELWQAFFANPVDWWDNRKNKKN----PKYPD 251
              SS    +G K           +    + W     NP +WWD+R+NK N    P++PD
Sbjct: 206 VMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPD 265

Query: 252 FKHKDTGEALWVEGRYNPPWVKSQLAILD 271
           FK KD+  +LW+     P WV  +L  L+
Sbjct: 266 FKSKDSSFSLWLNKA--PNWVLPKLEGLE 292

[Close]

BLAST of Lag0002343 vs. ExPASy Swiss-Prot
Match: Q8GWJ4 (Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB3 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.1e-20
Identity = 69/203 (33.99%), Postives = 103/203 (50.74%), Query Frame = 0


Query: 74  PSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETS-WINLTFWDE 133
           P +I +K E+SN ++LIG V  PV+    + GK  A T ++    S  ++ WI + F  +
Sbjct: 71  PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130

Query: 134 LAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSNSTA-----P 193
           LA IA QHV+K ++I+VSG+L  D    +    Q+  +V+VQ LNF++ + ST      P
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190

Query: 194 NYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKN----PKYPDFK 253
             +  S      R      +D    T   W+    NP +W D+R NK N    P +PDFK
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDE--ETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFK 250

Query: 254 HKDTGEALWVEGRYNPPWVKSQL 267
            K  G +LW+     P W   +L
Sbjct: 251 MKVGGLSLWLSTA--PDWALLKL 269

[Close]

BLAST of Lag0002343 vs. ExPASy Swiss-Prot
Match: Q9FYJ2 (Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.1e-19
Identity = 64/219 (29.22%), Postives = 111/219 (50.68%), Query Frame = 0


Query: 68  SVTYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETS---- 127
           S  +P+P E+P++ +++NS+ LIG V  PV+      GK  A T ++   SS   S    
Sbjct: 56  SEEWPRPMEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSESDS 115

Query: 128 ----WINLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTY----------- 187
               WI + F  +LAH A  +++K ++++++G+++ D++++     Q +           
Sbjct: 116 SSNFWIPVLFEGDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGSF 175

Query: 188 -YKVVVQQLNFIERSNS---TAPNYDQD------SSSVVAGRKLSNGAVDNMGSTQELWQ 247
            ++V+V+ L++IE S +     P  DQ+      S+SV  GR+              LW 
Sbjct: 176 SHQVMVRDLHYIEGSKAMPKVLPTLDQNEGVLKHSASVQRGREFGT----------NLWF 235

Query: 248 AFFANPVDWWDNRKNKK----NPKYPDFKHKDTGEALWV 254
                P +W D R+ K+    NPK+PDFK KD  +ALW+
Sbjct: 236 DLVDKPNEWCDYREMKQNGSVNPKHPDFKKKDGSQALWL 264

[Close]

BLAST of Lag0002343 vs. ExPASy Swiss-Prot
Match: Q9KUW2 (Single-stranded DNA-binding protein OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=ssb PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.2e-07
Identity = 32/104 (30.77%), Postives = 55/104 (52.88%), Query Frame = 0


Query: 85  NSVSLIGTVGMPVELKHLASGKDVA---------WTRLAVWKSSTETSWINLTFWDELAH 144
           N V LIG +G   E++++ SG  VA         W   A  +   +T W  +T + +LA 
Sbjct: 7   NKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTEWHRVTLYGKLAE 66

Query: 145 IAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI 180
           +A ++++KG+Q+Y+ G+L     +   G+ +   +VVVQ  N I
Sbjct: 67  VAGEYLRKGSQVYIEGQLQTRKWQDQSGQDRYSTEVVVQGYNGI 110

[Close]

BLAST of Lag0002343 vs. ExPASy TrEMBL
Match: A0A1S3BRV3 (protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.8e-146
Identity = 260/296 (87.84%), Postives = 276/296 (93.24%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKDSIFSIPRNKLRIASFSPFLSHQNAPNNKQLRFATRFPKCSA 60
           M +ALEQTLTLSSS  SK+SIFSIPRN+LRI+SF PF S+ N P  K LRFATRFPKCSA
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPP--KHLRFATRFPKCSA 62

Query: 61  MENYGNYS-VTYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSS 120
           MENY NYS VTYPKPSEIPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSS
Sbjct: 63  MENYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSS 122

Query: 121 TETSWINLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI 180
           TETSWI+LTFWDELAHIA QHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI
Sbjct: 123 TETSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI 182

Query: 181 ERSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKY 240
           ERSNSTAP+YDQDS+S++AGRK S+GAVDN  STQELWQAFFANPVDWWDNRKNKKNPKY
Sbjct: 183 ERSNSTAPHYDQDSNSIMAGRKPSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKNPKY 242

Query: 241 PDFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 296
           PDFKHKDTGEALWVEGRYNPPWVKSQLA+LDMRM SLD+QE KM NFV+NFDFPSY
Sbjct: 243 PDFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of Lag0002343 vs. ExPASy TrEMBL
Match: A0A5D3DR47 (Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 6.9e-146
Identity = 259/296 (87.50%), Postives = 276/296 (93.24%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKDSIFSIPRNKLRIASFSPFLSHQNAPNNKQLRFATRFPKCSA 60
           M +ALEQTLTLSSS  SK+SIFSIPRN+LRI+SF PF S+ N P  K LRFATRFPKCSA
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPP--KHLRFATRFPKCSA 62

Query: 61  MENYGNYS-VTYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSS 120
           MENY NYS VTYPKPSEIPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSS
Sbjct: 63  MENYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSS 122

Query: 121 TETSWINLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI 180
           TETSWI+LTFWDELAHIA QHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI
Sbjct: 123 TETSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI 182

Query: 181 ERSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKY 240
           ERSNSTAP+YDQDS+S++AGRK S+GAVDN  STQELWQAFFANPVDWWDNRKNKK+PKY
Sbjct: 183 ERSNSTAPHYDQDSNSIMAGRKPSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKSPKY 242

Query: 241 PDFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 296
           PDFKHKDTGEALWVEGRYNPPWVKSQLA+LDMRM SLD+QE KM NFV+NFDFPSY
Sbjct: 243 PDFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of Lag0002343 vs. ExPASy TrEMBL
Match: A0A0A0K4W2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.5e-145
Identity = 259/296 (87.50%), Postives = 275/296 (92.91%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKDSIFSIPRNKLRIASFSPFLSHQNAPNNKQLRFATRFPKCSA 60
           M+MALEQTL LSSSL SK+SIFSIPRN+L I+SF PF S+ N P  K LRF   FPKCSA
Sbjct: 1   MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPP--KHLRFPAPFPKCSA 60

Query: 61  MENYGNYS-VTYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSS 120
           MENY NYS VTYPKPS+IPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSS
Sbjct: 61  MENYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSS 120

Query: 121 TETSWINLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI 180
           TETSWI LTFWDELAHIA QHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI
Sbjct: 121 TETSWIGLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI 180

Query: 181 ERSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKY 240
           ERSNSTAP+YDQDS+S++AGRK  +GAVDN GSTQELWQAFFANPVDWWDNRKNKKNPKY
Sbjct: 181 ERSNSTAPHYDQDSNSIMAGRKPGSGAVDNTGSTQELWQAFFANPVDWWDNRKNKKNPKY 240

Query: 241 PDFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 296
           PDFKHKDTGEALWVEGRYNPPWVKSQLA+LDMRMGSLD+QEAKMANFVT+FDFPSY
Sbjct: 241 PDFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMGSLDDQEAKMANFVTSFDFPSY 294

[Close]

BLAST of Lag0002343 vs. ExPASy TrEMBL
Match: A0A6J1DQC6 (protein OSB2, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022838 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 4.9e-144
Identity = 256/295 (86.78%), Postives = 272/295 (92.20%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKDSIFSIPRNKLRIASFSPFLSHQNAPNNKQLRFATRFPKCSA 60
           M+MALEQTL+LSSSLL K ++ SIPRN+ RIAS    LSH +A   K+LRFA RFPKCSA
Sbjct: 1   MVMALEQTLSLSSSLLPKHTLLSIPRNRFRIAS----LSHLDAA--KRLRFARRFPKCSA 60

Query: 61  MENYGNYSVTYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSST 120
           MEN+ NYS +Y KP EIPW KELSNSVSLIGTVG PVE+KHLASGKDVAWTRLAVWKSST
Sbjct: 61  MENFSNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSST 120

Query: 121 ETSWINLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 180
           ETSWINLTFWDELAHIAFQHVQKGNQI+VSGRLVADLVEADDGKQQTYYKVVVQQLNFIE
Sbjct: 121 ETSWINLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 180

Query: 181 RSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYP 240
           RS STAP++DQDS+S+VAGRKL NGA DNMGSTQELWQAFFANPVDWWDNRKNKKNPKYP
Sbjct: 181 RSISTAPHHDQDSNSIVAGRKLGNGAADNMGSTQELWQAFFANPVDWWDNRKNKKNPKYP 240

Query: 241 DFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 296
           DFKHKDTGEALWVEGRYNPPWVKSQLA+LDMRMGSLDEQEAKMANFVTN DFPSY
Sbjct: 241 DFKHKDTGEALWVEGRYNPPWVKSQLAVLDMRMGSLDEQEAKMANFVTNLDFPSY 289

[Close]

BLAST of Lag0002343 vs. ExPASy TrEMBL
Match: A0A6J1DNW7 (protein OSB2, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022838 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 4.6e-142
Identity = 255/295 (86.44%), Postives = 271/295 (91.86%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKDSIFSIPRNKLRIASFSPFLSHQNAPNNKQLRFATRFPKCSA 60
           M+MALEQTL+LSSSLL K ++ SIPRN+ RIAS    LSH +A   K+LRFA RFPKCSA
Sbjct: 1   MVMALEQTLSLSSSLLPKHTLLSIPRNRFRIAS----LSHLDAA--KRLRFARRFPKCSA 60

Query: 61  MENYGNYSVTYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSST 120
           MEN+ NYS +Y KP EIPW KELSNSVSLIGTVG PVE+KHLASGKDVAWTRLAVWKSST
Sbjct: 61  MENFSNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSST 120

Query: 121 ETSWINLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 180
           ETSWINLTFWDELAHIAFQHVQKGNQI+VSGRLVADLVEADDGKQQTYYKVVVQQLNFIE
Sbjct: 121 ETSWINLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 180

Query: 181 RSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYP 240
           RS STAP++DQDS+S+VAGRKL NGA DNMGSTQELWQAFFANPVDWWDNRKN KNPKYP
Sbjct: 181 RSISTAPHHDQDSNSIVAGRKLGNGAADNMGSTQELWQAFFANPVDWWDNRKN-KNPKYP 240

Query: 241 DFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 296
           DFKHKDTGEALWVEGRYNPPWVKSQLA+LDMRMGSLDEQEAKMANFVTN DFPSY
Sbjct: 241 DFKHKDTGEALWVEGRYNPPWVKSQLAVLDMRMGSLDEQEAKMANFVTNLDFPSY 288

[Close]

BLAST of Lag0002343 vs. TAIR 10
Match: AT1G47720.1 (Primosome PriB/single-strand DNA-binding )

HSP 1 Score: 120.9 bits (302), Expect = 1.7e-27
Identity = 74/217 (34.10%), Postives = 112/217 (51.61%), Query Frame = 0


Query: 71  YPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWK--SSTETSWINLT 130
           + KP     K  L NSVSL+G V   +++ +    +   +T L V    +   +  I+L 
Sbjct: 42  FKKPLSTKLKFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLR 101

Query: 131 FWDELAHIAFQHVQKGNQIYVSGRLVADLVEADD--GKQQTYYKVVVQQLNFIERSNSTA 190
            WD +A     H++  + I VSGRL +    + D        Y+V V ++N++    +  
Sbjct: 102 MWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYV----AAP 161

Query: 191 PNYDQDSS-SVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHK 250
           P++  DS  S     K  +   ++      LWQ FF+NP DWWDNR+NKKNPK PDFKHK
Sbjct: 162 PSHVLDSQISKNPKTKTEDDIEESKKDEIYLWQVFFSNPYDWWDNRRNKKNPKQPDFKHK 221

Query: 251 DTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAK 283
           DTGEALW+     P W+  +L + D +    DE++ +
Sbjct: 222 DTGEALWLCSDL-PDWITRRLELFDQKNRFYDEEKTR 253

[Close]

BLAST of Lag0002343 vs. TAIR 10
Match: AT4G20010.2 (plastid transcriptionally active 9 )

HSP 1 Score: 109.0 bits (271), Expect = 6.6e-24
Identity = 73/209 (34.93%), Postives = 112/209 (53.59%), Query Frame = 0


Query: 72  PKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETS-WINLTFW 131
           P+P+EI ++ E++N V+LIG V  PV+ +  + GK  A T ++   +S  +  WI + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 132 DELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE-RSNSTAPNY 191
            +LA  A ++V K +QI+VSG+L  D    +    Q   +V+VQ LNFI+  S S +P  
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 192 DQDSS-SVVAGRKLSNGAVDN---MGSTQELWQAFFANPVDWWDNRKNKKN----PKYPD 251
              SS    +G K   G       +    + W     NP +WWD+R+NK N    P++PD
Sbjct: 206 VMSSSEKEESGIKKQPGIAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPD 265

Query: 252 FKHKDTGEALWVEGRYNPPWVKSQLAILD 271
           FK KD+  +LW+     P WV  +L  L+
Sbjct: 266 FKSKDSSFSLWLNKA--PNWVLPKLEGLE 292

[Close]

BLAST of Lag0002343 vs. TAIR 10
Match: AT4G20010.1 (plastid transcriptionally active 9 )

HSP 1 Score: 106.7 bits (265), Expect = 3.3e-23
Identity = 72/209 (34.45%), Postives = 111/209 (53.11%), Query Frame = 0


Query: 72  PKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETS-WINLTFW 131
           P+P+EI ++ E++N V+LIG V  PV+ +  + GK  A T ++   +S  +  WI + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 132 DELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE-RSNSTAPNY 191
            +LA  A ++V K +QI+VSG+L  D    +    Q   +V+VQ LNFI+  S S +P  
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 192 DQDSS-SVVAGRKLSNGAVDN---MGSTQELWQAFFANPVDWWDNRKNKKN----PKYPD 251
              SS    +G K           +    + W     NP +WWD+R+NK N    P++PD
Sbjct: 206 VMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPD 265

Query: 252 FKHKDTGEALWVEGRYNPPWVKSQLAILD 271
           FK KD+  +LW+     P WV  +L  L+
Sbjct: 266 FKSKDSSFSLWLNKA--PNWVLPKLEGLE 292

[Close]

BLAST of Lag0002343 vs. TAIR 10
Match: AT5G44785.2 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 102.1 bits (253), Expect = 8.1e-22
Identity = 69/203 (33.99%), Postives = 103/203 (50.74%), Query Frame = 0


Query: 74  PSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETS-WINLTFWDE 133
           P +I +K E+SN ++LIG V  PV+    + GK  A T ++    S  ++ WI + F  +
Sbjct: 71  PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130

Query: 134 LAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSNSTA-----P 193
           LA IA QHV+K ++I+VSG+L  D    +    Q+  +V+VQ LNF++ + ST      P
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190

Query: 194 NYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKN----PKYPDFK 253
             +  S      R      +D    T   W+    NP +W D+R NK N    P +PDFK
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDE--ETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFK 250

Query: 254 HKDTGEALWVEGRYNPPWVKSQL 267
            K  G +LW+     P W   +L
Sbjct: 251 MKVGGLSLWLSTA--PDWALLKL 269

[Close]

BLAST of Lag0002343 vs. TAIR 10
Match: AT5G44785.1 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 102.1 bits (253), Expect = 8.1e-22
Identity = 69/203 (33.99%), Postives = 103/203 (50.74%), Query Frame = 0


Query: 74  PSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETS-WINLTFWDE 133
           P +I +K E+SN ++LIG V  PV+    + GK  A T ++    S  ++ WI + F  +
Sbjct: 71  PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130

Query: 134 LAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSNSTA-----P 193
           LA IA QHV+K ++I+VSG+L  D    +    Q+  +V+VQ LNF++ + ST      P
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190

Query: 194 NYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKN----PKYPDFK 253
             +  S      R      +D    T   W+    NP +W D+R NK N    P +PDFK
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDE--ETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFK 250

Query: 254 HKDTGEALWVEGRYNPPWVKSQL 267
            K  G +LW+     P W   +L
Sbjct: 251 MKVGGLSLWLSTA--PDWALLKL 269

The following BLAST results are available for this feature:

BLAST of Lag0002343 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896738.1	2.0e-152	90.51	protein OSB2, chloroplastic-like [Benincasa hispida]	[more]
XP_008451268.1	3.7e-146	87.84	PREDICTED: protein OSB2, chloroplastic-like [Cucumis melo]	[more]
KAA0059696.1	1.4e-145	87.50	protein OSB2 [Cucumis melo var. makuwa] >TYK26133.1 protein OSB2 [Cucumis melo v...	[more]
XP_004146958.1	3.2e-145	87.50	protein OSB2, chloroplastic isoform X1 [Cucumis sativus] >KGN44765.1 hypothetica...	[more]
XP_022155802.1	1.0e-143	86.78	protein OSB2, chloroplastic-like isoform X1 [Momordica charantia]	[more]

BLAST of Lag0002343 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX99	2.4e-26	34.10	Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1	[more]
Q8GXH3	4.6e-22	34.45	Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2	[more]
Q8GWJ4	1.1e-20	33.99	Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB...	[more]
Q9FYJ2	2.1e-19	29.22	Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1	[more]
Q9KUW2	3.2e-07	30.77	Single-stranded DNA-binding protein OS=Vibrio cholerae serotype O1 (strain ATCC ...	[more]

BLAST of Lag0002343 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BRV3	1.8e-146	87.84	protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV...	[more]
A0A5D3DR47	6.9e-146	87.50	Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 P...	[more]
A0A0A0K4W2	1.5e-145	87.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1	[more]
A0A6J1DQC6	4.9e-144	86.78	protein OSB2, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1DNW7	4.6e-142	86.44	protein OSB2, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of Lag0002343 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47720.1	1.7e-27	34.10	Primosome PriB/single-strand DNA-binding	[more]
AT4G20010.2	6.6e-24	34.93	plastid transcriptionally active 9	[more]
AT4G20010.1	3.3e-23	34.45	plastid transcriptionally active 9	[more]
AT5G44785.2	8.1e-22	33.99	organellar single-stranded DNA binding protein 3	[more]
AT5G44785.1	8.1e-22	33.99	organellar single-stranded DNA binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011344	Single-stranded DNA-binding protein	TIGRFAM	TIGR00621	TIGR00621	coord: 85..190 e-value: 1.8E-16 score: 58.9
IPR011344	Single-stranded DNA-binding protein	PANTHER	PTHR10302	SINGLE-STRANDED DNA-BINDING PROTEIN	coord: 29..287
IPR000424	Primosome PriB/single-strand DNA-binding	PFAM	PF00436	SSB	coord: 85..178 e-value: 8.8E-17 score: 61.1
IPR000424	Primosome PriB/single-strand DNA-binding	PROSITE	PS50935	SSB	coord: 83..180 score: 21.278084
IPR000424	Primosome PriB/single-strand DNA-binding	CDD	cd04496	SSB_OBF	coord: 87..179 e-value: 9.39731E-19 score: 77.6525
None	No IPR available	GENE3D	2.40.50.140		coord: 81..189 e-value: 3.4E-21 score: 77.4
None	No IPR available	PANTHER	PTHR10302:SF15	OS03G0633900 PROTEIN	coord: 29..287
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 85..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0002343.1	Lag0002343.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006264	mitochondrial DNA replication
biological_process	GO:0051096	positive regulation of helicase activity
biological_process	GO:0006260	DNA replication
cellular_component	GO:0042645	mitochondrial nucleoid
molecular_function	GO:0003697	single-stranded DNA binding