Lag0002266 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0002266
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr4: 41115769 .. 41116813 (-)
RNA-Seq Expression	Lag0002266
Synteny	Lag0002266

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCTCCATGCTGCCCTCATAACACTCCGAAACGCCTCCACATTCACCCGCTTCGAGGAGAAGACTTTACCTATCACACACAGTTCTATCGAGCCCCTTGACAAAACCGGTGTCCCCTCCCCTGGCCGTACCATCTCTGCCTCTTCCTCTGTCAGTCTCCAGGAGTTCCATCGACTAACTAAATCTTCCATTCTCGCCCCTTCCTAGCCTGCTCCAGACCCACACCACCGACCCACAAGAAGCACACACCCCCACCCGACAACCACCAGAACACAGACACACTCTGCTGCCAAAGCACAAGCACACCTTATTGCCCAAACCACATATACTGCCAAGACACAAGATACAGCCAGAACACACCCTATTACCAAACACAGACACTACTAGGACACACCCTACAGCCAAACACAAACACTGCCAGAGAAAACCAACCCACTGCCAAAAACACTGTCAGTGCAATATCCACTATCACAACACAGAAACACACGCACAAATCGATAAACCCACCAAACAGCAAGAACACAAAACCAAGACTCAAACCAAAACTGCACAAACCTCTGTCTACCAACCAGCAAAAACCCCCGCAAACAGCCGCCTTAAAACCCAAGACTTGCCGCCTCGATCCAACCCAACATACCCACCAGCAGCCCCGACCCAAAACCCCAACCCAAACCCTCTGCAACAACCGCACAACCGCGCCGCCTGCCCAACTCGCCGTCTCAACTCAGCGCCAAAACCCCCACGCACAGACCGCCCGCTCAGATCGACGGGGAAACCCTCACGCCGCCCCTCCTCCGTCGCAAGCCCACCACGTCCGCCGCCTCGTCCCCACCGCGCCGCCCGCACAGACCTGCCCAAGAAACCCCAACCTCACTTACCTCCGCCGCCCCCCCAATCTGCCGAAGGAAACCAGAAAAAACCCCACGCCGCCGAAGACGCACTGCCGCCGCAGCCCGTCGTCCCTCCGTCTCCGCCGCAGACCGACCGCGCCGCGCCGCCTCCACCTAGCCTCCAACTCGCCGAAACCCTAACCCCAAACTAG

mRNA sequence

ATGACTCTCCATGCTGCCCTCATAACACTCCGAAACGCCTCCACATTCACCCGCTTCGAGGAGAAGACTTTACCTATCACACACAGTTCTATCGAGCCCCTTGACAAAACCGGTGTCCCCTCCCCTGGCCGTACCATCTCTGCCTCTTCCTCTACCCACACCACCGACCCACAAGAAGCACACACCCCCACCCGACAACCACCAGAACACAGACACACTCTGCTGCCAAAGCACAAGCACACCTTATTGCCCAAACCACATATACTGCCAAGACACAAGATACAGCCAGAACACACCCTATTACCAAACACAGACACTACTAGGACACACCCTACAGCCAAACACAAACACTGCCAGAGAAAACCAACCCACTGCCAAAAACACTGTCAGTGCAATATCCACTATCACAACACAGAAACACACGCACAAATCGATAAACCCACCAAACAGCAAGAACACAAAACCAAGACTCAAACCAAAACTGCACAAACCTCTGTCTACCAACCAGCAAAAACCCCCGCAAACAGCCGCCTTAAAACCCAAGACTTGCCGCCTCGATCCAACCCAACATACCCACCAGCAGCCCCGACCCAAAACCCCAACCCAAACCCTCTGCAACAACCGCACAACCGCGCCGCCTGCCCAACTCGCCGTCTCAACTCAGCGCCAAAACCCCCACGCACAGACCGCCCGCTCAGATCGACGGGGAAACCCTCACGCCGCCCCTCCTCCGTCGCAAGCCCACCACGTCCGCCGCCTCGTCCCCACCGCGCCGCCCGCACAGACCTGCCCAAGAAACCCCAACCTCACTTACCTCCGCCGCCCCCCCAATCTGCCGAAGGAAACCAGAAAAAACCCCACGCCGCCGAAGACGCACTGCCGCCGCAGCCCGTCGTCCCTCCGTCTCCGCCGCAGACCGACCGCGCCGCGCCGCCTCCACCTAGCCTCCAACTCGCCGAAACCCTAACCCCAAACTAG

Coding sequence (CDS)

ATGACTCTCCATGCTGCCCTCATAACACTCCGAAACGCCTCCACATTCACCCGCTTCGAGGAGAAGACTTTACCTATCACACACAGTTCTATCGAGCCCCTTGACAAAACCGGTGTCCCCTCCCCTGGCCGTACCATCTCTGCCTCTTCCTCTACCCACACCACCGACCCACAAGAAGCACACACCCCCACCCGACAACCACCAGAACACAGACACACTCTGCTGCCAAAGCACAAGCACACCTTATTGCCCAAACCACATATACTGCCAAGACACAAGATACAGCCAGAACACACCCTATTACCAAACACAGACACTACTAGGACACACCCTACAGCCAAACACAAACACTGCCAGAGAAAACCAACCCACTGCCAAAAACACTGTCAGTGCAATATCCACTATCACAACACAGAAACACACGCACAAATCGATAAACCCACCAAACAGCAAGAACACAAAACCAAGACTCAAACCAAAACTGCACAAACCTCTGTCTACCAACCAGCAAAAACCCCCGCAAACAGCCGCCTTAAAACCCAAGACTTGCCGCCTCGATCCAACCCAACATACCCACCAGCAGCCCCGACCCAAAACCCCAACCCAAACCCTCTGCAACAACCGCACAACCGCGCCGCCTGCCCAACTCGCCGTCTCAACTCAGCGCCAAAACCCCCACGCACAGACCGCCCGCTCAGATCGACGGGGAAACCCTCACGCCGCCCCTCCTCCGTCGCAAGCCCACCACGTCCGCCGCCTCGTCCCCACCGCGCCGCCCGCACAGACCTGCCCAAGAAACCCCAACCTCACTTACCTCCGCCGCCCCCCCAATCTGCCGAAGGAAACCAGAAAAAACCCCACGCCGCCGAAGACGCACTGCCGCCGCAGCCCGTCGTCCCTCCGTCTCCGCCGCAGACCGACCGCGCCGCGCCGCCTCCACCTAGCCTCCAACTCGCCGAAACCCTAACCCCAAACTAG

Protein sequence

MTLHAALITLRNASTFTRFEEKTLPITHSSIEPLDKTGVPSPGRTISASSSTHTTDPQEAHTPTRQPPEHRHTLLPKHKHTLLPKPHILPRHKIQPEHTLLPNTDTTRTHPTAKHKHCQRKPTHCQKHCQCNIHYHNTETHAQIDKPTKQQEHKTKTQTKTAQTSVYQPAKTPANSRLKTQDLPPRSNPTYPPAAPTQNPNPNPLQQPHNRAACPTRRLNSAPKPPRTDRPLRSTGKPSRRPSSVASPPRPPPRPHRAARTDLPKKPQPHLPPPPPQSAEGNQKKPHAAEDALPPQPVVPPSPPQTDRAAPPPPSLQLAETLTPN

Homology

The following BLAST results are available for this feature:

BLAST of Lag0002266 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0002266 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0002266 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0002266 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..325
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..280

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0002266.1	Lag0002266.1	mRNA