
Lag0002152 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAATGAAGGTCCTTGTTCTTGACGAAGCTGATCATTTATTAGACATGGGATTTCGAAAGGACATCGAGAGGATTATTGATGCAGTTCCAAAGCAAAGGCAAACTCTTTTATTTTCAACCACGGTTCCAGAAGAGGTATTTATTTACTTGCTGCTTTTTCCGTCCTGTTTTTCATACTTCTTCATTTTAAATATAAGCAAATATAAAATGCTAAACATTCCTCTTGAATAAAGGTTCGCCAAATCAGTCACAGTGCTTTGAGAAGAGATCATGAATCTGTCAATACAATTCATGAACAGGTAGGACTTATCATAAGCAGCTGTATCTTCTTCTGGCTCCTTTACCATCTTTAATGAATTTGGTCATCTAATAACAAGCTGGATCATTTCAGGTGAGACAAATGCAAATAGTTGCTCCATTGGAGAAGCATTTTAGTCTACTCTATGCTATACTTAAAGAACATATTGCTGATGACGTTGACTATAAGGTATCGACTTTAATCAGGGATAACAAATTTTTACCAATAGTTCAGTTTTAGTAATATCCTTATCTGTTATAATGAAGATAGGAAGTTCCTAGCTATTAG ATGGGAATGAAGGTCCTTGTTCTTGACGAAGCTGATCATTTATTAGACATGGGATTTCGAAAGGACATCGAGAGGATTATTGATGCAGTTCCAAAGCAAAGGCAAACTCTTTTATTTTCAACCACGGTTCCAGAAGAGGTTCGCCAAATCAGTCACAGTGCTTTGAGAAGAGATCATGAATCTGTCAATACAATTCATGAACAGGTGAGACAAATGCAAATAGTTGCTCCATTGGAGAAGCATTTTAGTCTACTCTATGCTATACTTAAAGAACATATTGCTGATGACGTTGACTATAAGGAAGTTCCTAGCTATTAG ATGGGAATGAAGGTCCTTGTTCTTGACGAAGCTGATCATTTATTAGACATGGGATTTCGAAAGGACATCGAGAGGATTATTGATGCAGTTCCAAAGCAAAGGCAAACTCTTTTATTTTCAACCACGGTTCCAGAAGAGGTTCGCCAAATCAGTCACAGTGCTTTGAGAAGAGATCATGAATCTGTCAATACAATTCATGAACAGGTGAGACAAATGCAAATAGTTGCTCCATTGGAGAAGCATTTTAGTCTACTCTATGCTATACTTAAAGAACATATTGCTGATGACGTTGACTATAAGGAAGTTCCTAGCTATTAG MGMKVLVLDEADHLLDMGFRKDIERIIDAVPKQRQTLLFSTTVPEEVRQISHSALRRDHESVNTIHEQVRQMQIVAPLEKHFSLLYAILKEHIADDVDYKEVPSY Homology
BLAST of Lag0002152 vs. NCBI nr
Match: XP_038898727.1 (DEAD-box ATP-dependent RNA helicase 31-like [Benincasa hispida]) HSP 1 Score: 174.9 bits (442), Expect = 3.7e-40 Identity = 92/107 (85.98%), Postives = 95/107 (88.79%), Query Frame = 0
BLAST of Lag0002152 vs. NCBI nr
Match: KAA0050997.1 (DEAD-box ATP-dependent RNA helicase 31-like [Cucumis melo var. makuwa] >TYK04387.1 DEAD-box ATP-dependent RNA helicase 31-like [Cucumis melo var. makuwa]) HSP 1 Score: 173.3 bits (438), Expect = 1.1e-39 Identity = 92/107 (85.98%), Postives = 94/107 (87.85%), Query Frame = 0
BLAST of Lag0002152 vs. NCBI nr
Match: XP_011659146.2 (DEAD-box ATP-dependent RNA helicase 31 [Cucumis sativus] >XP_011659147.2 DEAD-box ATP-dependent RNA helicase 31 [Cucumis sativus] >XP_011659148.2 DEAD-box ATP-dependent RNA helicase 31 [Cucumis sativus] >KAE8646212.1 hypothetical protein Csa_015831 [Cucumis sativus]) HSP 1 Score: 173.3 bits (438), Expect = 1.1e-39 Identity = 92/107 (85.98%), Postives = 95/107 (88.79%), Query Frame = 0
BLAST of Lag0002152 vs. NCBI nr
Match: XP_008461517.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Cucumis melo] >XP_008461520.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Cucumis melo]) HSP 1 Score: 173.3 bits (438), Expect = 1.1e-39 Identity = 92/107 (85.98%), Postives = 94/107 (87.85%), Query Frame = 0
BLAST of Lag0002152 vs. NCBI nr
Match: XP_022158751.1 (DEAD-box ATP-dependent RNA helicase 31-like [Momordica charantia]) HSP 1 Score: 172.6 bits (436), Expect = 1.9e-39 Identity = 92/107 (85.98%), Postives = 93/107 (86.92%), Query Frame = 0
BLAST of Lag0002152 vs. ExPASy Swiss-Prot
Match: Q9FNM7 (DEAD-box ATP-dependent RNA helicase 26 OS=Arabidopsis thaliana OX=3702 GN=RH26 PE=1 SV=2) HSP 1 Score: 149.8 bits (377), Expect = 1.7e-35 Identity = 75/109 (68.81%), Postives = 90/109 (82.57%), Query Frame = 0
BLAST of Lag0002152 vs. ExPASy Swiss-Prot
Match: Q9FFQ1 (DEAD-box ATP-dependent RNA helicase 31 OS=Arabidopsis thaliana OX=3702 GN=RH31 PE=2 SV=2) HSP 1 Score: 147.5 bits (371), Expect = 8.4e-35 Identity = 76/108 (70.37%), Postives = 87/108 (80.56%), Query Frame = 0
BLAST of Lag0002152 vs. ExPASy Swiss-Prot
Match: Q0DBU5 (DEAD-box ATP-dependent RNA helicase 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0526600 PE=3 SV=2) HSP 1 Score: 141.0 bits (354), Expect = 7.8e-33 Identity = 69/109 (63.30%), Postives = 88/109 (80.73%), Query Frame = 0
BLAST of Lag0002152 vs. ExPASy Swiss-Prot
Match: Q94C75 (DEAD-box ATP-dependent RNA helicase 25 OS=Arabidopsis thaliana OX=3702 GN=RH25 PE=2 SV=2) HSP 1 Score: 140.6 bits (353), Expect = 1.0e-32 Identity = 71/109 (65.14%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of Lag0002152 vs. ExPASy Swiss-Prot
Match: Q5ZBH5 (DEAD-box ATP-dependent RNA helicase 25 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0618400 PE=2 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 2.3e-32 Identity = 68/108 (62.96%), Postives = 89/108 (82.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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