Lag0001984 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0001984
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	serine/threonine-protein kinase 19 isoform X2
Location	chr4: 37915916 .. 37918234 (-)
RNA-Seq Expression	Lag0001984
Synteny	Lag0001984

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTATTCGACAAAAATTGTGCCCTCACCGCTTCCTGTAGAACTAATAGGACTTTCCTTTTCAGAGAAGCCTTATTCTTCCCCATCCCCACCGCTTCCTCTTTGGTGCCTTCTACCCCATTAGTGTGTGTGTATGGCTTTTGGTTTTTTTTTTTCTTTTTTTTTTTTTGGCAAATCCGATAAGAACGCGAGCCACACTCAGTATCACAAACTCGAGCGATCCAACAACTTCAATCCACATCGAGGCTCTTCAGGCACTCACTCTAAGCCTAGCAAACACTAAAAATACGAAATTATGATTTTCATTGAATCTTTAGTTTTCAATTCACTAATTAAAGGTTCAAAACGAATATAGTAATCGACACGTACCTTCAACCAAGAGGTTAAAAGTTTGAATATTTTATCCTAAATACGGTCAAAAACAAAAAAATCACTGATCAAATGAATCAAGTGCATGTTTGGGAGTGATTTTAAAATGTTTAATATAACTTTTGTCATGTTCGAAATCACTCAGAAATATACATTTAATTATTCAAAATCAATTTTATGTCTGATTTTACACTTTAAGACGTGATTTTCATACCATCAAAATTAATTTTGAATTATTAAAGACATGTTTCGGAGTGATTTTGAATATAACAAAAGTGATTTTGACAATTTTAAAATCACTTCCAAATATGCACCAAACATGCACTAAGTTAAACTTTTATAACAATCAATTATTAAAAAAAAAAAAAAAAAAAAAAAACAGCGAAGAGGAATCGTCCATTTGATTAACAATCCTCTGACTCAACAAAACTCGGGAGAAGAGATTCCTTCTCACATTTACAGTTGAGGTGGAAGAACCTACTGCTATTGCTACTGCTACTGCATGGTCCGATTCTTCTATTGCAGCCATGAATAATTCTTCAGAATCTTCTAAAGCGAGGAAACGCCGACGAGAGGCCGAAATTGAAGTGGGTGCCGATGACAATACCGAAACCATCGCTCTAGGTACCCTCTGGCCATTTTCTATCATTTTATTCGCCCAATTGGTTAATTGATTACTAGACCATGTTATTTTTACTTCAAATGCAGAGGACTGTCTTAAATTTAGCGATACTTTGGCGGCGCTTCGTATGATGCGAGCTCAGTTTCCCAACATTGACAAGGTTCAAGCTCTTCAATCTCATTTGACATTTGGGTTTTTTTAATTTTAGACGAGTATGTTATTGTTCGCTTCATGGAGACGATGTGCTGTGAGAGCCGGAGATAAATGTAATGGGGCTATTCAACTTCGTTAATCGAGTAATTGAAAATTATAGTTAGTGGGTCATTTATTGCCAGAGAATGCAAAGTATCGGATATGAGAATCTCGGGTATGCTTTGTGGCCGTGGAGGTTTCCCGTTGAGGAGAAATTGGATGTGGGATTGGGAAAATTCCTTTTCTATTTTTTATGGACCTACTGGATGGAGAGAACAATGGCTTTTCTATTGATAGTGGTGCTTGTTAGGATGGAGAGAACAAGTTGAAGTTGGGTTGATATCTGAATGAAGGAATCTTTGAAGACATATGGGTGCTGTTGGGTAGAAAGAAGAAAGGAAAAATTGTTTCAGTGATTTTTTCAAAGGTGAGATATATTATTGCGGGAGTGTGTCTTAAGTCTATATAACTTTTGTGGGTTTTCTTCTCATGTTATTCTTATTCTCTTACTTTTATCATTGTTATTATTGTTTATGTGGAAGGAGAGTTAAGGATTATGTGAAAGTTTAAAATATCCAAGGTTCACCTTGTGGTAAAGACTGATTTTGAACACTGAAGGAATTATCAGTAAATTTGATGCTATAGATTGCTTTTTGGAAGATTTAGATCAAGAATTATTTTCCTAGTAAAAAGCTAAATCTAATATTGGAGAAGTCAGATGACATGATGGATGAAGATGGAAGCGTTTAGACACACAAGTACCTGGGTTGTATGCTTAATTTTGTAAAGGAATGTTGTGAAGAATGGAGCAAAAAAACATAACTTTAGTGGATCAAATGAAGGGCGTGTCAAAATATTATGAAAAGCCTTCCACCAATAACAAAGTTTATTTTACTTCGAAACTCTTTAATTTAAAGATGGCTGAAGCAGTGTCCTTTGCTAAATTCTTTAATGAATTTGATACAAGGATTAACTAGCTAATCTTGATGGAGTTAGAGATCATTAGAGAAAATGATATCGTCTTGTTTTGAGATCATTGCCTAACAGTTGAATATGGTTGAAATTTGCAGAGGACCGAGATGCAGCTCTTGCAGAAGAAATTTGGCAGAAGGACACTAGAGCGGATTTTACGTTAG

mRNA sequence

ATGCTATTCGACAAAAATTGTGCCCTCACCGCTTCCTGTAGAACTAATAGGACTTTCCTTTTCAGAGAAGCCTTATTCTTCCCCATCCCCACCGCTTCCTCTTTGGTGCCTTCTACCCCATTAGTGTTTGAGGTGGAAGAACCTACTGCTATTGCTACTGCTACTGCATGGTCCGATTCTTCTATTGCAGCCATGAATAATTCTTCAGAATCTTCTAAAGCGAGGAAACGCCGACGAGAGGCCGAAATTGAAGTGGGTGCCGATGACAATACCGAAACCATCGCTCTAGAGGACTGTCTTAAATTTAGCGATACTTTGGCGGCGCTTCGTATGATGCGAGCTCAGTTTCCCAACATTGACAAGAGGACCGAGATGCAGCTCTTGCAGAAGAAATTTGGCAGAAGGACACTAGAGCGGATTTTACGTTAG

Coding sequence (CDS)

ATGCTATTCGACAAAAATTGTGCCCTCACCGCTTCCTGTAGAACTAATAGGACTTTCCTTTTCAGAGAAGCCTTATTCTTCCCCATCCCCACCGCTTCCTCTTTGGTGCCTTCTACCCCATTAGTGTTTGAGGTGGAAGAACCTACTGCTATTGCTACTGCTACTGCATGGTCCGATTCTTCTATTGCAGCCATGAATAATTCTTCAGAATCTTCTAAAGCGAGGAAACGCCGACGAGAGGCCGAAATTGAAGTGGGTGCCGATGACAATACCGAAACCATCGCTCTAGAGGACTGTCTTAAATTTAGCGATACTTTGGCGGCGCTTCGTATGATGCGAGCTCAGTTTCCCAACATTGACAAGAGGACCGAGATGCAGCTCTTGCAGAAGAAATTTGGCAGAAGGACACTAGAGCGGATTTTACGTTAG

Protein sequence

MLFDKNCALTASCRTNRTFLFREALFFPIPTASSLVPSTPLVFEVEEPTAIATATAWSDSSIAAMNNSSESSKARKRRREAEIEVGADDNTETIALEDCLKFSDTLAALRMMRAQFPNIDKRTEMQLLQKKFGRRTLERILR

Homology

[Close]

BLAST of Lag0001984 vs. NCBI nr
Match: XP_022156618.1 (serine/threonine-protein kinase 19 isoform X1 [Momordica charantia])

HSP 1 Score: 86.7 bits (213), Expect = 1.8e-13
Identity = 47/58 (81.03%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 65  MNNSSESSKARKRRREAEIEV-GADDNTETIALEDCLKFSDTLAALRMMRAQFPNIDK 122
           M+N SESSKARKRRREAEIEV G ++++ETI+LEDCL FSDTLAALRMMRAQFP+IDK
Sbjct: 1   MSNISESSKARKRRREAEIEVDGEENDSETISLEDCLTFSDTLAALRMMRAQFPHIDK 58

[Close]

BLAST of Lag0001984 vs. NCBI nr
Match: XP_022156619.1 (serine/threonine-protein kinase 19 isoform X2 [Momordica charantia])

HSP 1 Score: 86.7 bits (213), Expect = 1.8e-13
Identity = 47/58 (81.03%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 65  MNNSSESSKARKRRREAEIEV-GADDNTETIALEDCLKFSDTLAALRMMRAQFPNIDK 122
           M+N SESSKARKRRREAEIEV G ++++ETI+LEDCL FSDTLAALRMMRAQFP+IDK
Sbjct: 1   MSNISESSKARKRRREAEIEVDGEENDSETISLEDCLTFSDTLAALRMMRAQFPHIDK 58

[Close]

BLAST of Lag0001984 vs. NCBI nr
Match: XP_008447257.1 (PREDICTED: serine/threonine-protein kinase 19 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 85.9 bits (211), Expect = 3.1e-13
Identity = 50/78 (64.10%), Postives = 58/78 (74.36%), Query Frame = 0


Query: 44  EVEEPTAIATATAWSDSSIAAMNNSSESSKARKRRREAEIEVGADDNTETIALEDCLKFS 103
           E EE    +   A+S+S  AAM++ SESSKA+KRRREAEIE    DNTE  +LEDCL F+
Sbjct: 8   ETEEHPRFSLIVAYSNS--AAMSSPSESSKAKKRRREAEIEDDGGDNTENFSLEDCLTFN 67

Query: 104 DTLAALRMMRAQFPNIDK 122
           DTLAAL MMRAQFP IDK
Sbjct: 68  DTLAALHMMRAQFPTIDK 83

[Close]

BLAST of Lag0001984 vs. NCBI nr
Match: XP_008447256.1 (PREDICTED: serine/threonine-protein kinase 19 isoform X1 [Cucumis melo])

HSP 1 Score: 85.9 bits (211), Expect = 3.1e-13
Identity = 50/78 (64.10%), Postives = 58/78 (74.36%), Query Frame = 0


Query: 44  EVEEPTAIATATAWSDSSIAAMNNSSESSKARKRRREAEIEVGADDNTETIALEDCLKFS 103
           E EE    +   A+S+S  AAM++ SESSKA+KRRREAEIE    DNTE  +LEDCL F+
Sbjct: 8   ETEEHPRFSLIVAYSNS--AAMSSPSESSKAKKRRREAEIEDDGGDNTENFSLEDCLTFN 67

Query: 104 DTLAALRMMRAQFPNIDK 122
           DTLAAL MMRAQFP IDK
Sbjct: 68  DTLAALHMMRAQFPTIDK 83

[Close]

BLAST of Lag0001984 vs. NCBI nr
Match: KAA0042074.1 (serine/threonine-protein kinase 19-like protein isoform X2 [Cucumis melo var. makuwa] >TYK18016.1 serine/threonine-protein kinase 19-like protein isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 84.3 bits (207), Expect = 9.0e-13
Identity = 49/78 (62.82%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 44  EVEEPTAIATATAWSDSSIAAMNNSSESSKARKRRREAEIEVGADDNTETIALEDCLKFS 103
           E EE    +   A+S+S  AAM++ SESSK +KRRREAEIE    DNTE  +LEDCL F+
Sbjct: 8   ETEEHPRFSLIVAYSNS--AAMSSPSESSKGKKRRREAEIEDDGGDNTENFSLEDCLTFN 67

Query: 104 DTLAALRMMRAQFPNIDK 122
           DTLAAL MMRAQFP IDK
Sbjct: 68  DTLAALHMMRAQFPTIDK 83

The following BLAST results are available for this feature:

BLAST of Lag0001984 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156618.1	1.8e-13	81.03	serine/threonine-protein kinase 19 isoform X1 [Momordica charantia]	[more]
XP_022156619.1	1.8e-13	81.03	serine/threonine-protein kinase 19 isoform X2 [Momordica charantia]	[more]
XP_008447257.1	3.1e-13	64.10	PREDICTED: serine/threonine-protein kinase 19 homolog isoform X2 [Cucumis melo]	[more]
XP_008447256.1	3.1e-13	64.10	PREDICTED: serine/threonine-protein kinase 19 isoform X1 [Cucumis melo]	[more]
KAA0042074.1	9.0e-13	62.82	serine/threonine-protein kinase 19-like protein isoform X2 [Cucumis melo var. ma...	[more]

BLAST of Lag0001984 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0001984.1	Lag0001984.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
molecular_function	GO:0004674	protein serine/threonine kinase activity