Lag0001939 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0001939
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Trigger_N domain-containing protein
Location	chr4: 37333819 .. 37338020 (+)
RNA-Seq Expression	Lag0001939
Synteny	Lag0001939

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCTGCAACCGCAACCGCAACGGTAACCAACATCGCCTCAGATTTCCGGCGGCCAACATTCACCAAAGTAAGCAATTCTATGCATTTCAATTCCAAAATATTCCTCAGAAGCCTAACCGATGTTTCGAATCTCGAAGCTCCATCGCATTTTGCCGCCTTCCGATATGTTTAGGATATTGCCATTTTCAACTTATTTTTTTGGATAGCAGGTTCCTGTTAAAGGCAATTGCCGCAATGCTCTGGTTTGTCTGAACTTCGGAGGCGTTGAATTTGATAATCTGCAAGATGAGCTGTGTAGGAGGTAAACATGTATTTTGGTTGCTTTCCTATTTCGATGTCGATTCTTAATTTAATTTCTCGAGCAGTGTATTGGTTTGTATAGCTTGTTCATTTTTCGTTTTGGTGAATGTCAATTGTACATGGAAACTGATGGAAGGAAGTGGGAACATTTTTTTTGTTTTCATTTTCAGGTCGTCATTTTCTTATAGTCCCCATGTATTGGGTTCCAGATTTTTGTCCAAACCGACCTCCATAGCTAGTTCAGGTAATTCTGATGTTTTGAGGGTTTCTTTTTGGGTGTTCGTGTAACAATTTAAACATTATTCCATGTAATTTAACATTTATAACGGTCACAAGAACTAATTCTTTACATACTTGGATCATACTTTATCTTGATAGAACGTTTGAAGATATAGACTATCATTACAATTTTTAAACTACTTGGATTGAGTTGTTGCATGTTTAAAGTTCATTGACTACATCGCTTCAAATTTTAAACTATAGGAATCAAACTGTTACACGCTAAGCTGATGGACTAAATTGCTTTTTTCAGTTTTTGACCAAATATATTTTTTAACGTTTATTCTTCTTCTTCTTCCTTTTTCCTTTCCCCTTATTTTCAGAGATTCTTGTTTTCTTTTAATGTACTCTGGGAAAAAATTACAAAATTATAGTAATTTGGATGCTAATGACAAAAGTAGGATAGTTTTACTAGTAAATCGCATCTAGTAGTTTGCACGAAGAAGACATTATTATCTTCTATATCATGTATCAGAAAATCGTGTTGGAGGAATTTGTAAATCATGCTTAAGAAACATGTAGATTTAAGAAATCATGGGTAAGAAACACAATGATGGATTTGGTAAAAATTATCCACGTTCTGTCATTATCTTTTAAATTATTAACCACCATTTTTTAATCAACTCTAGTTGTGCAAAAAAGATCCTTTTTCTGGTTAGGCTTGTGTCGTTTTGTTTATCTTCTGTTTTGATGTCATAGGTTTGGAGGCAACCATCACAGATTACAAAGGCAATGCAATAACCTTAAAAAATGCTCAAATAGTTGTAGAATCTGAAGATGAAAACAAGATACAAGTAAGGACTATGTAAACCAGTTGTAGCATGCATTACATTTTTGGTTGCAGCATAGAGTTTTACCATTTTAATTGTCATTCTGGAAGGAAATATATCTAATAAATTCATAGCATTGTAAAATGCTTTCGTCTGACAAGTTCTCAAAGAGCTCGTTTTTCTCATAAACCATGCAACTTCATTTCTAGTTTTAAGTGTAAGTTTAATGCTCTTTTTATGCGTACTGGTAAAGATAAATATAAATCTTACAAAACATATATTTACATTTCATATTGAAATTTTGATGAATGTTTTTATCCTCTAAGTCATATAAATTATAGTGTATATTTCCAATGTGAAACACACATCTTACCAAATATATGTATAATTCTTATTGAAAAATGGAAGCTAATCTATCTATTACTTTAGGGCTTGCATTACAAAACTTGGTAGAAGTTGGTATTATTTATGAACAGAAGGATACAAACTTGGGGATGATCATAGAGTTCCCCTCTCTCCCAAACTACCATACTTCACTCAAGAAAAGCATACATTCTTAAGACACTACCTTCTCTATATCTACTATCATACATTCACACTCTCCCGACGTCACCTCACTTAGTTACAACTTGTGCCCACCAAAGCTAACTAACAATCTATTCTCAATCTAAGCCTTTATTAGGCATATTAGTAGGAAACTAGAGAAGATGTATGAGCCACTCTTTCTCTTATATACGCTATTTAAATCTCGTGATTTGAATTGAAGGTCTATCCCTAGCCTATATGGCCTGCCTTTACTATTTGCTGGTAAGTCGCCTGGTTCAAGCACCAAAGACCTTCAAGTTGGGTTGGAGCTCTCTGCTCCATTCCGAGGGGATTGGCTAGACCAAGACTAGGAGACATGACCGGTAGACTCCTTTGAAGACAAGGGCCTATTTTTCCTTTATGTGTTTTCCAGCTTTTTAATCGGGAATCTATCTGCTCCTCTTTGGATAGGAGGGCATATTGTCATAAATAGTTTGCTAAATGTAGTAGGACAGGCCACAGGGGTTTGAGAAGGCAGAATTTGGAGCATAGATATTTTGGGACAATCTAGACCTCTCAAAGTGTTTCGTTATTGTAAATTTTCTTTTATACCTGAATAGAATTTCTGTATTATTTTCTTTACTTTCATTCTCAATCAAGATTGGGTTCTTGTCATCCTTCCCTTTCACGTTCTCTTTGATAAGTGACCTATCAAAAATGTCTAATAAAATCTAATCGACAGCTAAGAGTGGACTTGACGGGAGATGAGACTCAGAAGGTATTTGATCAGGTTTTGACAAATTTGGCCCGCTCGGCACCGCCAATGCCAGGATTTCGAAGGCAAAAAGGAGGTAGTACCGCTACCGTGATTATCCTCTCCCTCCACATTGAAATCAGAACAATTCATTCATACTGCAACATGAGTCTTTTACATGTTTATTCATATGTCAAGCATGGGAAGTGCCTTGTCTATAGTTATGAGTTCATATATGTAGCTGCTTTTACAGCTCATAAGTTCTTTATTTCTCGCAGCAAATGACTTGACTTTGTATGGTTTCTAATGTTTTCGTGTCTTCATGCCCATTGATGCTTCGCCAGGGAAAACATCAAATGTGAGTTGCTTCTCTTTGCCTTTTCTACTTTCCCCTTTGGGTTTCCAAGAATTTTCATTTTTTTTTTTTTTGTTTAATTCTAACCTATCTAATACGTCTTGTCACCTTTTGTGGTTTGTAATGATTTATTCCTAATATTTTCGTAAATTTAACTGTTCAATCATTGAGTTAAAAATCTTATTATGGAGTTGATCGAAAAATAACCTATTCATGAAATATGGGCAAGTTATAAGAAGTGATTCCATTACAAAATTTAGAATGTTTCTCTTTTGATTTGGTTAAATTTGATTTCACATATGATTCACTTTTATTCAGTAACCATATTCATTTTTGGGCATGTTATCTGGGGATTTACATCCTACTTGTACATATTCTATTCTTCCACAAGGTTTTTATTTCTAAACAACGAATTCCTGCAGGTCCCAAAAAGCTTCCTCTTAGAAGTCCTCGGCAAGGATCGTGTCACAAAGTTTGTCATTCAAGAAATATTAAACTCAACTATGGCAGATTATGCAAAGAAGGCAAGTTTACCCTCATTGCTTTGCTTCTTATGTTTAGCTTCAATTTCGGTTCTATGTGACTCGACATCCTTCATTAAAGAATGACGTGCCATGTCTGCTAGACAAATCTTTAGATTTAACCTGATGTGATGGACCAATGATAGAAAGAAATCAAAAGTTGGACTAAATAGTGTGACATAGTTTGTGAAATGAATTTGATATGTCACTATAAAGACACGATATGTTGCATGTGTTGCTTTATTTTGTCAAGCTCTCTATTTTCTTTTGTTCGTTGTTTGTCAAGTCGTGTCAAATCAACCAATATTTATCCAATTAGCATATATATAATGTTACCATTTAGATAGTAGTATTGATGTTAGATACAGTATGAAATCACAATTCAAAGTTTAAAGACGTAGTTAAACTTCAAGTTTAGAGTCTAAATAGAAACTATTCATAACTAAATTTGTACTTTATCTGTAACTATGAAAGAACGCTTATCCAAATATGCTTTCGATAAATTCGTATTTCTCATAAAACAGAAGTTCATTTTTTCTTTTGACTCCAACACAGGAAAATATAAATGTGAAGGACAAGAAGGTTAGCACAAGCCAAACAGCAGATGAACTGAAAATGTTGTTTAGTCCAGGAAAAGATTTTGGTTTCAATGCAATACTTGAGCTTGAATCTGCTGCAGAGGAAGAAAATTGA

mRNA sequence

ATGGCGTCTGCAACCGCAACCGCAACGGTAACCAACATCGCCTCAGATTTCCGGCGGCCAACATTCACCAAAGTTCCTGTTAAAGGCAATTGCCGCAATGCTCTGGTTTGTCTGAACTTCGGAGGCGTTGAATTTGATAATCTGCAAGATGAGCTGTGTAGGAGGTCGTCATTTTCTTATAGTCCCCATGTATTGGGTTCCAGATTTTTGTCCAAACCGACCTCCATAGCTAGTTCAGGTTTGGAGGCAACCATCACAGATTACAAAGGCAATGCAATAACCTTAAAAAATGCTCAAATAGTTGTAGAATCTGAAGATGAAAACAAGATACAACTAAGAGTGGACTTGACGGGAGATGAGACTCAGAAGGTATTTGATCAGGTTTTGACAAATTTGGCCCGCTCGGCACCGCCAATGCCAGGATTTCGAAGGCAAAAAGGAGGGAAAACATCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTCCTCGGCAAGGATCGTGTCACAAAGTTTGTCATTCAAGAAATATTAAACTCAACTATGGCAGATTATGCAAAGAAGGAAAATATAAATGTGAAGGACAAGAAGGTTAGCACAAGCCAAACAGCAGATGAACTGAAAATGTTGTTTAGTCCAGGAAAAGATTTTGGTTTCAATGCAATACTTGAGCTTGAATCTGCTGCAGAGGAAGAAAATTGA

Coding sequence (CDS)

ATGGCGTCTGCAACCGCAACCGCAACGGTAACCAACATCGCCTCAGATTTCCGGCGGCCAACATTCACCAAAGTTCCTGTTAAAGGCAATTGCCGCAATGCTCTGGTTTGTCTGAACTTCGGAGGCGTTGAATTTGATAATCTGCAAGATGAGCTGTGTAGGAGGTCGTCATTTTCTTATAGTCCCCATGTATTGGGTTCCAGATTTTTGTCCAAACCGACCTCCATAGCTAGTTCAGGTTTGGAGGCAACCATCACAGATTACAAAGGCAATGCAATAACCTTAAAAAATGCTCAAATAGTTGTAGAATCTGAAGATGAAAACAAGATACAACTAAGAGTGGACTTGACGGGAGATGAGACTCAGAAGGTATTTGATCAGGTTTTGACAAATTTGGCCCGCTCGGCACCGCCAATGCCAGGATTTCGAAGGCAAAAAGGAGGGAAAACATCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTCCTCGGCAAGGATCGTGTCACAAAGTTTGTCATTCAAGAAATATTAAACTCAACTATGGCAGATTATGCAAAGAAGGAAAATATAAATGTGAAGGACAAGAAGGTTAGCACAAGCCAAACAGCAGATGAACTGAAAATGTTGTTTAGTCCAGGAAAAGATTTTGGTTTCAATGCAATACTTGAGCTTGAATCTGCTGCAGAGGAAGAAAATTGA

Protein sequence

MASATATATVTNIASDFRRPTFTKVPVKGNCRNALVCLNFGGVEFDNLQDELCRRSSFSYSPHVLGSRFLSKPTSIASSGLEATITDYKGNAITLKNAQIVVESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVSTSQTADELKMLFSPGKDFGFNAILELESAAEEEN

Homology

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BLAST of Lag0001939 vs. NCBI nr
Match: XP_038906537.1 (uncharacterized protein LOC120092511 [Benincasa hispida])

HSP 1 Score: 402.9 bits (1034), Expect = 1.9e-108
Identity = 206/231 (89.18%), Postives = 219/231 (94.81%), Query Frame = 0


Query: 1   MASATATATVTNIASDFRRPTFTKVPVKGNCRNALVCLNFGGVEFDNLQDELCRRSSFSY 60
           M SATATAT TNIAS+FR P FT+VPVKG CRN LVCLNFGGVEFDN+QD LCRRSSFSY
Sbjct: 1   MLSATATATATNIASEFRWPIFTQVPVKGYCRNPLVCLNFGGVEFDNVQDGLCRRSSFSY 60

Query: 61  SPHVLGSRFLSKPTSIASSGLEATITDYKGNAITLKNAQIVVESEDENKIQLRVDLTGDE 120
           S H +GSRFLSKPTSIASSGLEA ITDYKGNAITLKNA++VVESE+ENKIQLRVDLTGDE
Sbjct: 61  SSHKVGSRFLSKPTSIASSGLEAAITDYKGNAITLKNAKVVVESEEENKIQLRVDLTGDE 120

Query: 121 TQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTM 180
           TQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRV KFVIQEILNSTM
Sbjct: 121 TQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVIKFVIQEILNSTM 180

Query: 181 ADYAKKENINVKDKKVSTSQTADELKMLFSPGKDFGFNAILELESAAEEEN 232
           ADYAKKENINVKDKKV+T+QTADELK+LFSPGK+FGFNAILELESA++ EN
Sbjct: 181 ADYAKKENINVKDKKVNTTQTADELKVLFSPGKEFGFNAILELESASDAEN 231

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BLAST of Lag0001939 vs. NCBI nr
Match: XP_011656737.1 (uncharacterized protein LOC101212225 [Cucumis sativus] >KGN46335.1 hypothetical protein Csa_004841 [Cucumis sativus])

HSP 1 Score: 398.3 bits (1022), Expect = 4.6e-107
Identity = 202/230 (87.83%), Postives = 219/230 (95.22%), Query Frame = 0


Query: 2   ASATATATVTNIASDFRRPTFTKVPVKGNCRNALVCLNFGGVEFDNLQDELCRRSSFSYS 61
           A+ATATATVTNIAS+F RP FTKVPVKG C NALVCLNFGGVEFDN++D LCRRSSFSYS
Sbjct: 4   ATATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSFSYS 63

Query: 62  PHVLGSRFLSKPTSIASSGLEATITDYKGNAITLKNAQIVVESEDENKIQLRVDLTGDET 121
            H +GSRFLSKPTSIASSGLEA ITDYKGN ITLKNA++VVESE+ENKIQLRVDLTGDET
Sbjct: 64  FHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDET 123

Query: 122 QKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMA 181
           QKVFDQVLTNLARSAPPMPGFR+QKGGKTSNVPKSFLLEVLGKDRVTKF+IQEILNSTM 
Sbjct: 124 QKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNSTMV 183

Query: 182 DYAKKENINVKDKKVSTSQTADELKMLFSPGKDFGFNAILELESAAEEEN 232
           DYAKKENINVKDKKVST+QTADELK+LF+PGK+FGFNAILELESA++ E+
Sbjct: 184 DYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 233

[Close]

BLAST of Lag0001939 vs. NCBI nr
Match: XP_008460020.1 (PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo])

HSP 1 Score: 392.9 bits (1008), Expect = 1.9e-105
Identity = 202/231 (87.45%), Postives = 219/231 (94.81%), Query Frame = 0


Query: 2   ASATATATVTNIA-SDFRRPTFTKVPVKGNCRNALVCLNFGGVEFDNLQDELCRRSSFSY 61
           A+ATATATVTNIA S+F RP FTKV VKG C NALVCLNFGGVEFDN+QD LCRRSSFSY
Sbjct: 4   ATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSY 63

Query: 62  SPHVLGSRFLSKPTSIASSGLEATITDYKGNAITLKNAQIVVESEDENKIQLRVDLTGDE 121
           S H +GSRFLSKPTSIASSGLEA +TDYKGNAITLKNA++VVESE+ENKIQLRVDLTGDE
Sbjct: 64  SSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLTGDE 123

Query: 122 TQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTM 181
           TQKVFDQVLTNLARSAPPMPGFR+QKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTM
Sbjct: 124 TQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTM 183

Query: 182 ADYAKKENINVKDKKVSTSQTADELKMLFSPGKDFGFNAILELESAAEEEN 232
           ADYAKKENINVKD KV+T+QTADELK+LF+PGK+FGFNAILELESA++ E+
Sbjct: 184 ADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES 234

[Close]

BLAST of Lag0001939 vs. NCBI nr
Match: XP_022155406.1 (uncharacterized protein LOC111022553 [Momordica charantia])

HSP 1 Score: 375.6 bits (963), Expect = 3.2e-100
Identity = 190/227 (83.70%), Postives = 211/227 (92.95%), Query Frame = 0


Query: 4   ATATATVTNIASDFRRPTFTKVPVKGNCRNALVCLNFGGVEFDNLQDELCRRSSFSYSPH 63
           A+ATATVTN+AS++RR +F KVPVKG CR+ L C N GGVEFDN+Q+ LCRRSSFS SPH
Sbjct: 2   ASATATVTNLASEYRRASFIKVPVKGYCRSVLACSNSGGVEFDNVQNGLCRRSSFSCSPH 61

Query: 64  VLGSRFLSKPTSIASSGLEATITDYKGNAITLKNAQIVVESEDENKIQLRVDLTGDETQK 123
            LGSRFLS+PTSIASSGLEA ITDYKGNAI LKNA+IVVESEDEN IQLRVDL+GDETQK
Sbjct: 62  KLGSRFLSRPTSIASSGLEAAITDYKGNAIALKNAKIVVESEDENLIQLRVDLSGDETQK 121

Query: 124 VFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADY 183
           +FDQVLTNLARSAPPMPGFR QKGGKTSNVPKSFLLEVLG++RVTKFVIQEILNSTMADY
Sbjct: 122 IFDQVLTNLARSAPPMPGFRMQKGGKTSNVPKSFLLEVLGEERVTKFVIQEILNSTMADY 181

Query: 184 AKKENINVKDKKVSTSQTADELKMLFSPGKDFGFNAILELESAAEEE 231
           AKKEN+NVKDKKV+T+QTADELK+LF+PGK+FGFNAILELESA  E+
Sbjct: 182 AKKENVNVKDKKVNTTQTADELKLLFTPGKEFGFNAILELESANSED 228

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BLAST of Lag0001939 vs. NCBI nr
Match: XP_023004174.1 (uncharacterized protein LOC111497577 [Cucurbita maxima])

HSP 1 Score: 372.1 bits (954), Expect = 3.5e-99
Identity = 196/236 (83.05%), Postives = 214/236 (90.68%), Query Frame = 0


Query: 2   ASATATATVTNIASDFRRPTFTKVPVKGNCRNALVCLNFGGVEFDNLQDELCRRSSFSYS 61
           A+ATATATV NIAS+FRRP FTKVPV G  RNAL+C+NFGGVEF+N+QD LC RSS SYS
Sbjct: 4   ATATATATVANIASEFRRPVFTKVPVNGRRRNALICMNFGGVEFENVQDRLCTRSSVSYS 63

Query: 62  PHVLGSRFLSKPTSIASSGLEATITDYKGNAITLKNAQIVVESEDENKIQLRVDLTGDET 121
             V+GSRFLS+PT+IASSGLEA ITDYKG AITLKNA+IVVESEDENKIQLRV+LTGDET
Sbjct: 64  LLVVGSRFLSRPTAIASSGLEAAITDYKG-AITLKNAKIVVESEDENKIQLRVNLTGDET 123

Query: 122 QKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMA 181
           QKVFDQVLTNLARSAPPMPGFR+QKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMA
Sbjct: 124 QKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMA 183

Query: 182 DYAKKENINVKDKKVSTSQTADELKMLFSPGKDFGFNAILELE------SAAEEEN 232
           DYAKKENI VKDK V+T+QT DELK+LF PGK+FGFNAILELE      SA+E+EN
Sbjct: 184 DYAKKENIKVKDKMVNTTQTEDELKVLFRPGKEFGFNAILELELEPELDSASEDEN 238

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BLAST of Lag0001939 vs. ExPASy Swiss-Prot
Match: Q8YQX9 (Trigger factor OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=tig PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.3e-07
Identity = 37/126 (29.37%), Postives = 69/126 (54.76%), Query Frame = 0


Query: 99  QIVVESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFL 158
           ++  E    ++I L +++T + TQK ++QV+ NL+R+   +PGFR+ K      VP+  L
Sbjct: 2   KVTQEKLPASQIGLEIEITPEITQKTYEQVIKNLSRTV-NIPGFRKGK------VPRQVL 61

Query: 159 LEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVSTSQTADELKMLFSPGKDFGFN 218
           L+ LGK  +    ++E+L   +    K+E+I    +    S + D+L   + PG+   F 
Sbjct: 62  LQRLGKTHIKAAALEELLQDGIEQAIKQESIAAIGQPRLRS-SFDDLINSYEPGQPLTFT 119

Query: 219 AILELE 225
           A +++E
Sbjct: 122 AAVDVE 119

[Close]

BLAST of Lag0001939 vs. ExPASy Swiss-Prot
Match: Q3M725 (Trigger factor OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=tig PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.3e-07
Identity = 37/126 (29.37%), Postives = 69/126 (54.76%), Query Frame = 0


Query: 99  QIVVESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFL 158
           ++  E    ++I L +++T + TQK ++QV+ NL+R+   +PGFR+ K      VP+  L
Sbjct: 2   KVTQEKLPASQIGLEIEITPEITQKTYEQVIKNLSRTV-NIPGFRKGK------VPRQVL 61

Query: 159 LEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVSTSQTADELKMLFSPGKDFGFN 218
           L+ LGK  +    ++E+L   +    K+E+I    +    S + D+L   + PG+   F 
Sbjct: 62  LQRLGKTHIKAAALEELLQDGIEQAIKQESIAAIGQPRLRS-SFDDLINSYEPGQPLTFT 119

Query: 219 AILELE 225
           A +++E
Sbjct: 122 AAVDVE 119

[Close]

BLAST of Lag0001939 vs. ExPASy Swiss-Prot
Match: B1XL18 (Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=tig PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.2e-06
Identity = 32/125 (25.60%), Postives = 66/125 (52.80%), Query Frame = 0


Query: 99  QIVVESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFL 158
           +++ E    +++ L +++  D TQK +D  +  LAR+   +PGFR+ K      VPK  L
Sbjct: 2   KVIQEKLPASQVGLEIEVPADVTQKAYDDTVRKLARTV-NLPGFRKGK------VPKQIL 61

Query: 159 LEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVSTSQTADELKMLFSPGKDFGFN 218
           ++ LG +R+   V++++++ ++     +ENI           + D+L   + PG+   F 
Sbjct: 62  IQRLGPNRIKASVLEDLIDDSLKAAIAQENIEALG-NFQLKSSFDDLISAYKPGEASSFK 118

Query: 219 AILEL 224
           A +++
Sbjct: 122 AAVDV 118

[Close]

BLAST of Lag0001939 vs. ExPASy Swiss-Prot
Match: B2IT89 (Trigger factor OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=tig PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 8.9e-05
Identity = 35/126 (27.78%), Postives = 65/126 (51.59%), Query Frame = 0


Query: 99  QIVVESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFL 158
           ++  E    ++I L +++T + T++ ++QV+ NLA +A  +PGFRR K      VP+  L
Sbjct: 2   KVTQEKLPASQIGLEIEITPEITKQTYEQVIKNLASTA-NIPGFRRGK------VPRPIL 61

Query: 159 LEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVSTSQTADELKMLFSPGKDFGFN 218
           L+ LG  R+    ++E++   +    K+E I    +    S   D +   + PGK     
Sbjct: 62  LQRLGTTRIKAAALEELIQDGIEQAVKQEAIPAIGQPQLRSSFEDLINN-YEPGKPLTIL 119

Query: 219 AILELE 225
           A +++E
Sbjct: 122 AAVDVE 119

[Close]

BLAST of Lag0001939 vs. ExPASy TrEMBL
Match: A0A0A0K988 (Trigger_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G086160 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.2e-107
Identity = 202/230 (87.83%), Postives = 219/230 (95.22%), Query Frame = 0


Query: 2   ASATATATVTNIASDFRRPTFTKVPVKGNCRNALVCLNFGGVEFDNLQDELCRRSSFSYS 61
           A+ATATATVTNIAS+F RP FTKVPVKG C NALVCLNFGGVEFDN++D LCRRSSFSYS
Sbjct: 4   ATATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSFSYS 63

Query: 62  PHVLGSRFLSKPTSIASSGLEATITDYKGNAITLKNAQIVVESEDENKIQLRVDLTGDET 121
            H +GSRFLSKPTSIASSGLEA ITDYKGN ITLKNA++VVESE+ENKIQLRVDLTGDET
Sbjct: 64  FHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDET 123

Query: 122 QKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMA 181
           QKVFDQVLTNLARSAPPMPGFR+QKGGKTSNVPKSFLLEVLGKDRVTKF+IQEILNSTM 
Sbjct: 124 QKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNSTMV 183

Query: 182 DYAKKENINVKDKKVSTSQTADELKMLFSPGKDFGFNAILELESAAEEEN 232
           DYAKKENINVKDKKVST+QTADELK+LF+PGK+FGFNAILELESA++ E+
Sbjct: 184 DYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES 233

[Close]

BLAST of Lag0001939 vs. ExPASy TrEMBL
Match: A0A1S3CBN2 (uncharacterized protein LOC103498959 OS=Cucumis melo OX=3656 GN=LOC103498959 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.3e-106
Identity = 202/231 (87.45%), Postives = 219/231 (94.81%), Query Frame = 0


Query: 2   ASATATATVTNIA-SDFRRPTFTKVPVKGNCRNALVCLNFGGVEFDNLQDELCRRSSFSY 61
           A+ATATATVTNIA S+F RP FTKV VKG C NALVCLNFGGVEFDN+QD LCRRSSFSY
Sbjct: 4   ATATATATVTNIASSEFPRPIFTKVSVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSY 63

Query: 62  SPHVLGSRFLSKPTSIASSGLEATITDYKGNAITLKNAQIVVESEDENKIQLRVDLTGDE 121
           S H +GSRFLSKPTSIASSGLEA +TDYKGNAITLKNA++VVESE+ENKIQLRVDLTGDE
Sbjct: 64  SSHRIGSRFLSKPTSIASSGLEAALTDYKGNAITLKNAKVVVESEEENKIQLRVDLTGDE 123

Query: 122 TQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTM 181
           TQKVFDQVLTNLARSAPPMPGFR+QKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTM
Sbjct: 124 TQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTM 183

Query: 182 ADYAKKENINVKDKKVSTSQTADELKMLFSPGKDFGFNAILELESAAEEEN 232
           ADYAKKENINVKD KV+T+QTADELK+LF+PGK+FGFNAILELESA++ E+
Sbjct: 184 ADYAKKENINVKDNKVNTTQTADELKVLFNPGKEFGFNAILELESASDAES 234

[Close]

BLAST of Lag0001939 vs. ExPASy TrEMBL
Match: A0A6J1DRL2 (uncharacterized protein LOC111022553 OS=Momordica charantia OX=3673 GN=LOC111022553 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.5e-100
Identity = 190/227 (83.70%), Postives = 211/227 (92.95%), Query Frame = 0


Query: 4   ATATATVTNIASDFRRPTFTKVPVKGNCRNALVCLNFGGVEFDNLQDELCRRSSFSYSPH 63
           A+ATATVTN+AS++RR +F KVPVKG CR+ L C N GGVEFDN+Q+ LCRRSSFS SPH
Sbjct: 2   ASATATVTNLASEYRRASFIKVPVKGYCRSVLACSNSGGVEFDNVQNGLCRRSSFSCSPH 61

Query: 64  VLGSRFLSKPTSIASSGLEATITDYKGNAITLKNAQIVVESEDENKIQLRVDLTGDETQK 123
            LGSRFLS+PTSIASSGLEA ITDYKGNAI LKNA+IVVESEDEN IQLRVDL+GDETQK
Sbjct: 62  KLGSRFLSRPTSIASSGLEAAITDYKGNAIALKNAKIVVESEDENLIQLRVDLSGDETQK 121

Query: 124 VFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADY 183
           +FDQVLTNLARSAPPMPGFR QKGGKTSNVPKSFLLEVLG++RVTKFVIQEILNSTMADY
Sbjct: 122 IFDQVLTNLARSAPPMPGFRMQKGGKTSNVPKSFLLEVLGEERVTKFVIQEILNSTMADY 181

Query: 184 AKKENINVKDKKVSTSQTADELKMLFSPGKDFGFNAILELESAAEEE 231
           AKKEN+NVKDKKV+T+QTADELK+LF+PGK+FGFNAILELESA  E+
Sbjct: 182 AKKENVNVKDKKVNTTQTADELKLLFTPGKEFGFNAILELESANSED 228

[Close]

BLAST of Lag0001939 vs. ExPASy TrEMBL
Match: A0A6J1KVH6 (uncharacterized protein LOC111497577 OS=Cucurbita maxima OX=3661 GN=LOC111497577 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.7e-99
Identity = 196/236 (83.05%), Postives = 214/236 (90.68%), Query Frame = 0


Query: 2   ASATATATVTNIASDFRRPTFTKVPVKGNCRNALVCLNFGGVEFDNLQDELCRRSSFSYS 61
           A+ATATATV NIAS+FRRP FTKVPV G  RNAL+C+NFGGVEF+N+QD LC RSS SYS
Sbjct: 4   ATATATATVANIASEFRRPVFTKVPVNGRRRNALICMNFGGVEFENVQDRLCTRSSVSYS 63

Query: 62  PHVLGSRFLSKPTSIASSGLEATITDYKGNAITLKNAQIVVESEDENKIQLRVDLTGDET 121
             V+GSRFLS+PT+IASSGLEA ITDYKG AITLKNA+IVVESEDENKIQLRV+LTGDET
Sbjct: 64  LLVVGSRFLSRPTAIASSGLEAAITDYKG-AITLKNAKIVVESEDENKIQLRVNLTGDET 123

Query: 122 QKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMA 181
           QKVFDQVLTNLARSAPPMPGFR+QKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMA
Sbjct: 124 QKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMA 183

Query: 182 DYAKKENINVKDKKVSTSQTADELKMLFSPGKDFGFNAILELE------SAAEEEN 232
           DYAKKENI VKDK V+T+QT DELK+LF PGK+FGFNAILELE      SA+E+EN
Sbjct: 184 DYAKKENIKVKDKMVNTTQTEDELKVLFRPGKEFGFNAILELELEPELDSASEDEN 238

[Close]

BLAST of Lag0001939 vs. ExPASy TrEMBL
Match: A0A6J1H8V8 (uncharacterized protein LOC111461115 OS=Cucurbita moschata OX=3662 GN=LOC111461115 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 3.2e-98
Identity = 193/227 (85.02%), Postives = 205/227 (90.31%), Query Frame = 0


Query: 4   ATATATVTNIASDFRRPTFTKVPVKGNCRNALVCLNFGGVEFDNLQDELCRRSSFSYSPH 63
           A+ATATV NIAS+FRRP FTKVPV G  RNALVCLNFGGVEF+N+QD LC RSS SYSP 
Sbjct: 2   ASATATVANIASEFRRPVFTKVPVNGRRRNALVCLNFGGVEFENVQDRLCTRSSVSYSPL 61

Query: 64  VLGSRFLSKPTSIASSGLEATITDYKGNAITLKNAQIVVESEDENKIQLRVDLTGDETQK 123
           V+GSRFLS+PT+IASSGLEA ITDYKG AITLKNA+IVVESEDENKIQLRVDLTGDETQK
Sbjct: 62  VVGSRFLSRPTAIASSGLEAAITDYKG-AITLKNAKIVVESEDENKIQLRVDLTGDETQK 121

Query: 124 VFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMADY 183
           VFDQVLTNLARSAP MPGFR+QKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTM DY
Sbjct: 122 VFDQVLTNLARSAPLMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFVIQEILNSTMVDY 181

Query: 184 AKKENINVKDKKVSTSQTADELKMLFSPGKDFGFNAILELESAAEEE 231
           AKKENI VKDK V+T+QT DELK LF PGK+FGFNAILELE   E E
Sbjct: 182 AKKENIKVKDKMVNTTQTEDELKALFRPGKEFGFNAILELELELEPE 227

[Close]

BLAST of Lag0001939 vs. TAIR 10
Match: AT2G30695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). )

HSP 1 Score: 113.2 bits (282), Expect = 2.7e-25
Identity = 53/126 (42.06%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 102 VESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEV 161
           VE+E  N++++ V ++G++TQ VF+ V   +  +A P+PGFRR KGGKT N+PK  LLE+
Sbjct: 75  VETETSNEVKVHVQVSGEKTQTVFNHVFEKMVAAAQPIPGFRRVKGGKTPNIPKDVLLEI 134

Query: 162 LGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVSTSQTADELKMLFSPGKDFGFNAIL 221
           LG  +V K VI++++NS + DY K+E++ V  K+++  Q+ ++L+  F PG+ F F+A +
Sbjct: 135 LGYSKVYKQVIKKLINSAIEDYVKQEDLKV-GKELTVVQSYEDLEETFEPGESFSFDATI 194

Query: 222 ELESAA 228
           +L+ A+
Sbjct: 195 KLQEAS 199

[Close]

BLAST of Lag0001939 vs. TAIR 10
Match: AT2G30695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 113.2 bits (282), Expect = 2.7e-25
Identity = 53/126 (42.06%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 102 VESEDENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRRQKGGKTSNVPKSFLLEV 161
           VE+E  N++++ V ++G++TQ VF+ V   +  +A P+PGFRR KGGKT N+PK  LLE+
Sbjct: 75  VETETSNEVKVHVQVSGEKTQTVFNHVFEKMVAAAQPIPGFRRVKGGKTPNIPKDVLLEI 134

Query: 162 LGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVSTSQTADELKMLFSPGKDFGFNAIL 221
           LG  +V K VI++++NS + DY K+E++ V  K+++  Q+ ++L+  F PG+ F F+A +
Sbjct: 135 LGYSKVYKQVIKKLINSAIEDYVKQEDLKV-GKELTVVQSYEDLEETFEPGESFSFDATI 194

Query: 222 ELESAA 228
           +L+ A+
Sbjct: 195 KLQEAS 199

The following BLAST results are available for this feature:

BLAST of Lag0001939 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906537.1	1.9e-108	89.18	uncharacterized protein LOC120092511 [Benincasa hispida]	[more]
XP_011656737.1	4.6e-107	87.83	uncharacterized protein LOC101212225 [Cucumis sativus] >KGN46335.1 hypothetical ...	[more]
XP_008460020.1	1.9e-105	87.45	PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo]	[more]
XP_022155406.1	3.2e-100	83.70	uncharacterized protein LOC111022553 [Momordica charantia]	[more]
XP_023004174.1	3.5e-99	83.05	uncharacterized protein LOC111497577 [Cucurbita maxima]	[more]

BLAST of Lag0001939 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8YQX9	7.3e-07	29.37	Trigger factor OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690...	[more]
Q3M725	7.3e-07	29.37	Trigger factor OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292...	[more]
B1XL18	1.2e-06	25.60	Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=320...	[more]
B2IT89	8.9e-05	27.78	Trigger factor OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN...	[more]

BLAST of Lag0001939 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K988	2.2e-107	87.83	Trigger_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G086160 P...	[more]
A0A1S3CBN2	9.3e-106	87.45	uncharacterized protein LOC103498959 OS=Cucumis melo OX=3656 GN=LOC103498959 PE=...	[more]
A0A6J1DRL2	1.5e-100	83.70	uncharacterized protein LOC111022553 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1KVH6	1.7e-99	83.05	uncharacterized protein LOC111497577 OS=Cucurbita maxima OX=3661 GN=LOC111497577...	[more]
A0A6J1H8V8	3.2e-98	85.02	uncharacterized protein LOC111461115 OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]

BLAST of Lag0001939 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30695.1	2.7e-25	42.06	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein ...	[more]
AT2G30695.2	2.7e-25	42.06	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008881	Trigger factor, ribosome-binding, bacterial	PFAM	PF05697	Trigger_N	coord: 99..224 e-value: 1.5E-11 score: 44.7
IPR036611	Trigger factor ribosome-binding domain superfamily	GENE3D	3.30.70.1050		coord: 100..224 e-value: 1.1E-20 score: 76.0
IPR036611	Trigger factor ribosome-binding domain superfamily	SUPERFAMILY	102735	Trigger factor ribosome-binding domain	coord: 99..223
None	No IPR available	PANTHER	PTHR30560:SF4	OS01G0894700 PROTEIN	coord: 44..229
IPR005215	Trigger factor	PANTHER	PTHR30560	TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE	coord: 44..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0001939.1	Lag0001939.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061077	chaperone-mediated protein folding
biological_process	GO:0051083	'de novo' cotranslational protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0015031	protein transport
biological_process	GO:0043335	protein unfolding
biological_process	GO:0006457	protein folding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0044183	protein folding chaperone
molecular_function	GO:0043022	ribosome binding