
Lag0001916 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGGGGCTGGCCGATTTTTTAAAAGGTTTGCGACGCAATATTTATTGCGTCGCAAACTACTTGCGACGAAACCACGGTTTCGTCGCAGAGTTTCGTCGCAGATCTGCGACGAAATGGGCTTTTCGTCGCAGATCTTGGCGGCCAAAAAAGCGCCATTTTCTAGACCTTGCGACGAAATGGTCCATTTTGTCGCAAGGTCTGCGACGAAACGTTTCGTCGCAGACCTTGCGACAAAATGGACCATTTCGTCGCACCAAAAAAAAATCTTGGCGCGAATATTTCGACCTTGCGACGAAATGGCTCTTTTCGTCGCAAGCTTGCGACGTAAATCAATTTTCGTCGCAAGCTTGCGACGTAAATCAATTTTCGTAGCAAGGCCTGCGACTTTTAGTTTTTCGTTGCTACGATTTCGTCGCTAAAACGCTTCTTTCTTGTAGTGTGCGTTTGTTGGTTTAGTCAAACTTATATTATTATTTGCTATAAGTAAGTTGAAGATGTTCTTTCTAATGGATGTAATGCCTAAATATTCTCTTTAATGTGTTGTTAGTGTTTTAATGTCCATGGTCGTCGTCGAGCGTCACAAGCCACTCGTCGATGTGAAACTCTTCAGGTTGTGTCCGATTTGGCAATTGAGGAATACTTCGTCTTCTTCGTCGTCAACTCATAACCTTCACCATAGTGGTCATGACCCTAGCGAAAGAAACTCAACGACGTCGAATAATAATATCAAATTGCCATCATCTTCCAAGACAGTGTCCTCTATGGTGAAGTCGTTGTTGCCTCCTCAGCATCGGCTTTGA ATGAAGGGGGCTGGCCGATTTTTTAAAAGGTTTGCGACGCAATATTTATTGCGTCGCAAACTACTTGCGACGAAACCACGGTTTCGTCGCAGAGTTTCGTCGCAGATCTGCGACGAAATGGGCTTTTCGTCGCAGATCTTGGCGGCCAAAAAAGCGCCATTTTCTAGACCTTGCGACGAAATGGTCCATTTTGTCGCAAGTGTTTTAATGTCCATGGTCGTCGTCGAGCGTCACAAGCCACTCGTCGATGTGAAACTCTTCAGGTTGTGTCCGATTTGGCAATTGAGGAATACTTCGTCTTCTTCGTCGTCAACTCATAACCTTCACCATAGTGGTCATGACCCTAGCGAAAGAAACTCAACGACGTCGAATAATAATATCAAATTGCCATCATCTTCCAAGACAGTGTCCTCTATGGTGAAGTCGTTGTTGCCTCCTCAGCATCGGCTTTGA ATGAAGGGGGCTGGCCGATTTTTTAAAAGGTTTGCGACGCAATATTTATTGCGTCGCAAACTACTTGCGACGAAACCACGGTTTCGTCGCAGAGTTTCGTCGCAGATCTGCGACGAAATGGGCTTTTCGTCGCAGATCTTGGCGGCCAAAAAAGCGCCATTTTCTAGACCTTGCGACGAAATGGTCCATTTTGTCGCAAGTGTTTTAATGTCCATGGTCGTCGTCGAGCGTCACAAGCCACTCGTCGATGTGAAACTCTTCAGGTTGTGTCCGATTTGGCAATTGAGGAATACTTCGTCTTCTTCGTCGTCAACTCATAACCTTCACCATAGTGGTCATGACCCTAGCGAAAGAAACTCAACGACGTCGAATAATAATATCAAATTGCCATCATCTTCCAAGACAGTGTCCTCTATGGTGAAGTCGTTGTTGCCTCCTCAGCATCGGCTTTGA MKGAGRFFKRFATQYLLRRKLLATKPRFRRRVSSQICDEMGFSSQILAAKKAPFSRPCDEMVHFVASVLMSMVVVERHKPLVDVKLFRLCPIWQLRNTSSSSSSTHNLHHSGHDPSERNSTTSNNNIKLPSSSKTVSSMVKSLLPPQHRL Homology
BLAST of Lag0001916 vs. NCBI nr
Match: XP_038900245.1 (vesicle-associated protein 4-1 [Benincasa hispida]) HSP 1 Score: 104.8 bits (260), Expect = 6.8e-19 Identity = 58/82 (70.73%), Postives = 66/82 (80.49%), Query Frame = 0
BLAST of Lag0001916 vs. NCBI nr
Match: KAG7024870.1 (Vesicle-associated protein 4-1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 98.2 bits (243), Expect = 6.4e-17 Identity = 54/83 (65.06%), Postives = 63/83 (75.90%), Query Frame = 0
BLAST of Lag0001916 vs. NCBI nr
Match: XP_022976559.1 (vesicle-associated protein 4-1-like [Cucurbita maxima]) HSP 1 Score: 96.7 bits (239), Expect = 1.8e-16 Identity = 53/81 (65.43%), Postives = 61/81 (75.31%), Query Frame = 0
BLAST of Lag0001916 vs. NCBI nr
Match: XP_022937296.1 (vesicle-associated protein 4-1-like [Cucurbita moschata]) HSP 1 Score: 95.5 bits (236), Expect = 4.1e-16 Identity = 52/81 (64.20%), Postives = 61/81 (75.31%), Query Frame = 0
BLAST of Lag0001916 vs. NCBI nr
Match: XP_023535121.1 (vesicle-associated protein 4-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 94.4 bits (233), Expect = 9.2e-16 Identity = 52/81 (64.20%), Postives = 60/81 (74.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|