
Lag0001853 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTCTCAAAGCTTCCTCCATGAAAATTATGAGAAGGTCGTCTTTATTTCAGGTTCTATTGCACAGTCTTTGTAAGTAAAGCTTCTCATTAATTTTCATGGAGGAATACTTTGAAGGAAGAGAGAGGAAGAAGAAAAAGAAACGTTTTTCATCTAAAACGTTATTTTTGAAATTTTTTCCCAAGTCATGGGTTAATGCAACTTGTTAAAGTTGAGGTATTATTGAACTTTGTGATCGACATAAGAGGGATGAGAGAAGGAAGCATTTCATTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGAGGGATTCAGGTACTCTCCTTACCATATATTGATATATTGAGGAAGATAATGCCCTAAGGCAATACAAAACATTCTTACAGTCGATTTGAGAGGGCCGGTAATCTCTCCCCTTACCCTAGAAAAGCATCAAATTCCACAGTACTAACCTATTACATACATATAGTTCCCAACAACCCAAACATTCTCACTGCATTCCCCTCTCCTCCCTGACCTTTCTAACTAACTGATCGACGGGGAAATCCCTTTCTTACCCCTCTGTGTATATTGAATGGTAATTGGGGGCCTAATAGATTCTTTTTGTTTTAAACTTTTGGTGTAAATGATATAAAGCCTTTTTTTTTTTGCTAATTGGTAGATTTTGTGTAACTTTCTTATGACTTTCATATTTCTCATTCTATTGATGACGTCATTTTTACAAAAAAAAAAGGTTGTTACATGGCGATGTCTTCACTTTTTCTCCTCTCTTCTTCATTCCATGCTATCCTCTTATTGCACATTATCTGTACCTTGAGCACCATTTAAAAGCATAATTCACATTGTCTGGCAGGCAAAAGAGGCTGGTAGTACAAGATTTTGTATGGGTGCTGCGTGGAGGGACACGATAGGAAGAAAAACTAATTTCAATCAGATACTTGATTATGTAAAAGAAATAAGGTAACGAATTTTCACCTTAAGTAACAATTAGCTACAAAGATAGAAGACCCAAATAAGTAGTTTACTTACAGAATACTGATTAAAAATGAATCAACAGTAAAATGAAAAAAAGTTTTTATATTCCCCTGCTCCTGTCAGGTTAGAATTGTTAGGACGAAAATGCTGTTGCATCTTAGAGTGAGTGATGGCACATAGCAGAGCACTTGGTAAGAATCTGATTTAAAAATAAACATTTAGTCAATGATTTGAAAGCGCCCAGTCTTGCACTTTTTTTTTTTTTTTTTTTTTGATAGGAAACAAGAGCCATTTCATTGACGTATGAAATAGATACAAAAGGGAGTCTATGTCTTGCACTTGTGTTTTCTCCCCCTTCTTTTCTTTACATACTAGAAAGAAAGTTGCTAGGATTTCTACTAAACACAGTTTCTTAAGCAAAGCCTTTGTCTTTTCTAATTTTTTTTAATCTCCACTTTATATTATGAAATTTTGTACTCTTTCAAGGCTTGGAATTTAGTTTTCTTCCCCTTTTGGTAATTTTTGCAATCAATGAAATATTTTTCTTATATATATATGTAAGATTTCTGCAATTGTTAAGATTAGCAATGGTTGACTCTTTAATATTGTCCAATCAAGCTATTGAAATTCATGATTGAGAAACTGAAACTTTGGTGAGAATGTACCACAATTATAGCTCTTTTGAATGAGAATAATCACTTGTCCATCGACATTCATTCTCAAATCAAAATTTTCTGTGATGTATTAGAGAGATGGGGATGGAGGTCTGCTGCACCTTGGGCATGATAGAGAAGCAACAAGCTGTAGAACTCAAGAAGGCAGGCCTTACAGCTTATAACCACAACCTAGACACGTCAAGGGAATACTACCCAAATATTATTACCACGAGGAGTTATGATGAGCGTTTGAAAACCCTAGAATTTGTTCGTGATGCTGGAATCAATGTCTGTTCTGGTAATTTTGTACATCTTTGATTTTGACTAAGATTTGGATTGATATATTGATAATTTGATTGGATATTCATAGATTCATAACTTATTTATGGGAAAAAGTTTCATTGAGAATAACTACTAGAAGAAATAGCTTACGAAAGAGAGGGGAAAAGCCCCACAAATCATAAGACTACAGAAGGGCAAACCAGTTGGCATTTGGCCATTATTTAGAATTCCTAACGCATGTAAGGAAAAATATATTCCTGGAAAATGTTCAGCCTGGTCAGAAAGCCAAGAAGTCTACTAAAAGTTATAATTGTAACAATTTGAAGAGGATAATATTCATTCCAGTGAGACATAGATATGGCTTTAAGATGGTATGAGGTTTCATCTGTTAGTAGACCAACTAACCCAAGGGTTGGGATCTGAGGACGTTGCATTTCTGAAGATCTCCACAGCTTCCGGGTTCTTGATTTGGGGTATTCGCTTGCCTGATGATGTTGGGAACATTTTTATTGATTATTTGTGCTGTGATTTTGTCTAGTTCTCTAATGTCCTCTTTATGATGGTAAACATCCAAAGAGATTTTTCCCCTTTCGTTGGTTGCTAGATGGTGGCGTAAACTCTCCTTTTTTTTTAATAGAAAAATATATATTTTTTGATGTGATGAAATATACCAAAGAAAGTTTCTGGGAGCCTTTGTAGTCTTACTTTGATATTCAAGCCAATTCTAGAGGTTTTTGCAACACCTTTGGCTAGATTATGAAGTTACCTCTTCCACCCCTTTTGTACTCTCTTTTTATGGCACATTATTGCAGTGTTTCTCCTTTGAAGAATATAAAGGGTATTAGGTAGACAAATACTCTCTGGGATTAATCCAGTAATGACTTCCTTTGAAAGCTAAACGTTTCTCTTTAATTTTTTAGCATTTTGAAGTAAATATGGCATTGGTACTTATGAGAACTTGGTGAAATTCTTAATTTATGGCAATAGGAGGAATAATTGGGCTTGGAGAGGCAGAAGAAGACCGTGTCGGTTTGCTGCATACCTTGGCAACGCTACCCACGCACCCTGAGAGCGTTCCCATCAACGCGCTGGTTGCAGTGAAAGGAACCCCTCTTCAAGATCAAAAAGTAGCTCCTATTTACTTAAGAATAACCTTTTTGTTTATTGCTCTCGAAGTCAGTTTACACGCTTGTTCATATTTGTTGCACAATTACCTTGTCTTATCTAGACACCACAACTTTCTTACTCATGAAATCTAGTTGCTTTGATTTCTATAGTGAATGATTTTCTTACCTATCTTTTCAGCCTGTTGAAATATGGGAGATGGTTCGAATGATCGCTACAGCACGGATCACCATGCCGAAAGCAATGGTCAGGTTGTCAGCAGGTAGAGTGAAGTTCTCCATGCCCGAGCAAGCGTTATGCTTCCTTGCAGGAGCGAATTCTATCTTCACCGGAGAGAAACTGCTAACGACGCCAAATAATGATTTTGATGCTGATCAACTCATGTTCAAGATGCTAGGTCTGATTCCAAAAGCTCCCAGTTTCACTGATGATGTTGAGAAAGCCCCTGAAGAAGAGTCATTACAAGAAGCTGCTTCCAGTTCATAA ATGAAGTCTCAAAGCTTCCTCCATGAAAATTATGAGAAGGTCGTCTTTATTTCAGGTTCTATTGCACAGTCTTTTCGATTTGAGAGGGCCGGTAATCTCTCCCCTTACCCTAGAAAAGCATCAAATTCCACAGCAAAAGAGGCTGGTAGTACAAGATTTTGTATGGGTGCTGCGTGGAGGGACACGATAGGAAGAAAAACTAATTTCAATCAGATACTTGATTATGTAAAAGAAATAAGAGAGATGGGGATGGAGGTCTGCTGCACCTTGGGCATGATAGAGAAGCAACAAGCTGTAGAACTCAAGAAGGCAGGCCTTACAGCTTATAACCACAACCTAGACACGTCAAGGGAATACTACCCAAATATTATTACCACGAGGAGTTATGATGAGCGTTTGAAAACCCTAGAATTTGTTCGTGATGCTGGAATCAATGTCTGTTCTGGAGGAATAATTGGGCTTGGAGAGGCAGAAGAAGACCGTGTCGGTTTGCTGCATACCTTGGCAACGCTACCCACGCACCCTGAGAGCGTTCCCATCAACGCGCTGGTTGCAGTGAAAGGAACCCCTCTTCAAGATCAAAAACCTGTTGAAATATGGGAGATGGTTCGAATGATCGCTACAGCACGGATCACCATGCCGAAAGCAATGGTCAGGTTGTCAGCAGGTAGAGTGAAGTTCTCCATGCCCGAGCAAGCGTTATGCTTCCTTGCAGGAGCGAATTCTATCTTCACCGGAGAGAAACTGCTAACGACGCCAAATAATGATTTTGATGCTGATCAACTCATGTTCAAGATGCTAGGTCTGATTCCAAAAGCTCCCAGTTTCACTGATGATGTTGAGAAAGCCCCTGAAGAAGAGTCATTACAAGAAGCTGCTTCCAGTTCATAA ATGAAGTCTCAAAGCTTCCTCCATGAAAATTATGAGAAGGTCGTCTTTATTTCAGGTTCTATTGCACAGTCTTTTCGATTTGAGAGGGCCGGTAATCTCTCCCCTTACCCTAGAAAAGCATCAAATTCCACAGCAAAAGAGGCTGGTAGTACAAGATTTTGTATGGGTGCTGCGTGGAGGGACACGATAGGAAGAAAAACTAATTTCAATCAGATACTTGATTATGTAAAAGAAATAAGAGAGATGGGGATGGAGGTCTGCTGCACCTTGGGCATGATAGAGAAGCAACAAGCTGTAGAACTCAAGAAGGCAGGCCTTACAGCTTATAACCACAACCTAGACACGTCAAGGGAATACTACCCAAATATTATTACCACGAGGAGTTATGATGAGCGTTTGAAAACCCTAGAATTTGTTCGTGATGCTGGAATCAATGTCTGTTCTGGAGGAATAATTGGGCTTGGAGAGGCAGAAGAAGACCGTGTCGGTTTGCTGCATACCTTGGCAACGCTACCCACGCACCCTGAGAGCGTTCCCATCAACGCGCTGGTTGCAGTGAAAGGAACCCCTCTTCAAGATCAAAAACCTGTTGAAATATGGGAGATGGTTCGAATGATCGCTACAGCACGGATCACCATGCCGAAAGCAATGGTCAGGTTGTCAGCAGGTAGAGTGAAGTTCTCCATGCCCGAGCAAGCGTTATGCTTCCTTGCAGGAGCGAATTCTATCTTCACCGGAGAGAAACTGCTAACGACGCCAAATAATGATTTTGATGCTGATCAACTCATGTTCAAGATGCTAGGTCTGATTCCAAAAGCTCCCAGTTTCACTGATGATGTTGAGAAAGCCCCTGAAGAAGAGTCATTACAAGAAGCTGCTTCCAGTTCATAA MKSQSFLHENYEKVVFISGSIAQSFRFERAGNLSPYPRKASNSTAKEAGSTRFCMGAAWRDTIGRKTNFNQILDYVKEIREMGMEVCCTLGMIEKQQAVELKKAGLTAYNHNLDTSREYYPNIITTRSYDERLKTLEFVRDAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALVAVKGTPLQDQKPVEIWEMVRMIATARITMPKAMVRLSAGRVKFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKMLGLIPKAPSFTDDVEKAPEEESLQEAASSS Homology
BLAST of Lag0001853 vs. NCBI nr
Match: XP_038886510.1 (biotin synthase, mitochondrial [Benincasa hispida]) HSP 1 Score: 491.5 bits (1264), Expect = 5.1e-135 Identity = 245/252 (97.22%), Postives = 251/252 (99.60%), Query Frame = 0
BLAST of Lag0001853 vs. NCBI nr
Match: XP_008445703.1 (PREDICTED: biotin synthase [Cucumis melo]) HSP 1 Score: 490.3 bits (1261), Expect = 1.1e-134 Identity = 244/250 (97.60%), Postives = 249/250 (99.60%), Query Frame = 0
BLAST of Lag0001853 vs. NCBI nr
Match: XP_004140874.1 (biotin synthase, mitochondrial [Cucumis sativus] >KGN45987.1 hypothetical protein Csa_005313 [Cucumis sativus]) HSP 1 Score: 490.3 bits (1261), Expect = 1.1e-134 Identity = 245/252 (97.22%), Postives = 250/252 (99.21%), Query Frame = 0
BLAST of Lag0001853 vs. NCBI nr
Match: KAA0033098.1 (biotin synthase [Cucumis melo var. makuwa] >TYK17135.1 biotin synthase [Cucumis melo var. makuwa]) HSP 1 Score: 490.3 bits (1261), Expect = 1.1e-134 Identity = 244/250 (97.60%), Postives = 249/250 (99.60%), Query Frame = 0
BLAST of Lag0001853 vs. NCBI nr
Match: XP_022150359.1 (biotin synthase [Momordica charantia]) HSP 1 Score: 488.0 bits (1255), Expect = 5.6e-134 Identity = 245/252 (97.22%), Postives = 250/252 (99.21%), Query Frame = 0
BLAST of Lag0001853 vs. ExPASy Swiss-Prot
Match: P54967 (Biotin synthase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=BIO2 PE=1 SV=1) HSP 1 Score: 438.0 bits (1125), Expect = 8.8e-122 Identity = 217/252 (86.11%), Postives = 236/252 (93.65%), Query Frame = 0
BLAST of Lag0001853 vs. ExPASy Swiss-Prot
Match: Q11S94 (Biotin synthase OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465) OX=269798 GN=bioB PE=3 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 1.9e-84 Identity = 157/243 (64.61%), Postives = 194/243 (79.84%), Query Frame = 0
BLAST of Lag0001853 vs. ExPASy Swiss-Prot
Match: Q5AYI7 (Biotin synthase, mitochondrial OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=bioB PE=2 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 1.4e-82 Identity = 158/279 (56.63%), Postives = 199/279 (71.33%), Query Frame = 0
BLAST of Lag0001853 vs. ExPASy Swiss-Prot
Match: A5FLT1 (Biotin synthase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=bioB PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 1.2e-75 Identity = 138/236 (58.47%), Postives = 178/236 (75.42%), Query Frame = 0
BLAST of Lag0001853 vs. ExPASy Swiss-Prot
Match: A6GW77 (Biotin synthase OS=Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86) OX=402612 GN=bioB PE=3 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 3.6e-75 Identity = 138/236 (58.47%), Postives = 178/236 (75.42%), Query Frame = 0
BLAST of Lag0001853 vs. ExPASy TrEMBL
Match: A0A5D3D025 (Biotin synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00740 PE=3 SV=1) HSP 1 Score: 490.3 bits (1261), Expect = 5.5e-135 Identity = 244/250 (97.60%), Postives = 249/250 (99.60%), Query Frame = 0
BLAST of Lag0001853 vs. ExPASy TrEMBL
Match: A0A0A0KCA2 (Biotin synthase OS=Cucumis sativus OX=3659 GN=Csa_6G041720 PE=3 SV=1) HSP 1 Score: 490.3 bits (1261), Expect = 5.5e-135 Identity = 245/252 (97.22%), Postives = 250/252 (99.21%), Query Frame = 0
BLAST of Lag0001853 vs. ExPASy TrEMBL
Match: A0A1S3BDC5 (Biotin synthase OS=Cucumis melo OX=3656 GN=LOC103488656 PE=3 SV=1) HSP 1 Score: 490.3 bits (1261), Expect = 5.5e-135 Identity = 244/250 (97.60%), Postives = 249/250 (99.60%), Query Frame = 0
BLAST of Lag0001853 vs. ExPASy TrEMBL
Match: A0A6J1D9U9 (Biotin synthase OS=Momordica charantia OX=3673 GN=LOC111018547 PE=3 SV=1) HSP 1 Score: 488.0 bits (1255), Expect = 2.7e-134 Identity = 245/252 (97.22%), Postives = 250/252 (99.21%), Query Frame = 0
BLAST of Lag0001853 vs. ExPASy TrEMBL
Match: A0A6J1EPY7 (Biotin synthase OS=Cucurbita moschata OX=3662 GN=LOC111436330 PE=3 SV=1) HSP 1 Score: 485.0 bits (1247), Expect = 2.3e-133 Identity = 242/251 (96.41%), Postives = 248/251 (98.80%), Query Frame = 0
BLAST of Lag0001853 vs. TAIR 10
Match: AT2G43360.1 (Radical SAM superfamily protein ) HSP 1 Score: 438.0 bits (1125), Expect = 6.2e-123 Identity = 217/252 (86.11%), Postives = 236/252 (93.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|