
Lag0001808 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAGATGAAGAAATTGGTTGGGTTTTGCTTTGTTGTGGCTCTCTATCTTGGTGCTCATACCACAGAGGCTAATGTCAGCTTCTCTCTATTGGGTGCCACTAGTGCAACCTACAAACAGTTCATAACCAATATGCGCACCACACTCACGGTTGGAACTCCAATTGTGTACAATATACCTGTGTTGAGGAGCACAGCAGCATGGGCAGCGTGCTACCTCTTAGTGCAGCTCACAAATTATAATCGTGAATCTATTACAGTGGCACTGGATGTAGTGAACGTGTATGTTGGAGGTAATTTTATTTTTCACAAAAACCAAACAGAAATTTACATTTATATTTGCAACCACTCCTGCCTAATTATATATTGTAAAATATTCAAGACTTTAGGGATCAACAAATAAACAAGAAAAAGTTTAGAAATTTAGGTTAAAACCCTTTAGAAGTTTAGAAGTTTAGAAGTTTAGAAATGTAAATTTCTATTTGGTTTTTGTGAAAAATAAAATTACCTCAAGTCAGTATTGTAACCACCAAGCTGATCTTGCCAAATGTTCTAACAGTTTTTTGA ATGGAAAAGATGAAGAAATTGGTTGGGTTTTGCTTTGTTGTGGCTCTCTATCTTGGTGCTCATACCACAGAGGCTAATGTCAGCTTCTCTCTATTGGGTGCCACTAGTGCAACCTACAAACAGTTCATAACCAATATGCGCACCACACTCACGGTTGGAACTCCAATTGTGTACAATATACCTGTGTTGAGGAGCACAGCAGCATGGGCAGCGTGCTACCTCTTAGTGCAGCTCACAAATTATAATCGTGAATCTATTACAGTGGCACTGGATGTAGTGAACGTGTATGTTGGAGTTTTTTGA ATGGAAAAGATGAAGAAATTGGTTGGGTTTTGCTTTGTTGTGGCTCTCTATCTTGGTGCTCATACCACAGAGGCTAATGTCAGCTTCTCTCTATTGGGTGCCACTAGTGCAACCTACAAACAGTTCATAACCAATATGCGCACCACACTCACGGTTGGAACTCCAATTGTGTACAATATACCTGTGTTGAGGAGCACAGCAGCATGGGCAGCGTGCTACCTCTTAGTGCAGCTCACAAATTATAATCGTGAATCTATTACAGTGGCACTGGATGTAGTGAACGTGTATGTTGGAGTTTTTTGA MEKMKKLVGFCFVVALYLGAHTTEANVSFSLLGATSATYKQFITNMRTTLTVGTPIVYNIPVLRSTAAWAACYLLVQLTNYNRESITVALDVVNVYVGVF Homology
BLAST of Lag0001808 vs. NCBI nr
Match: BAG12408.1 (karasurin-H precursor [Trichosanthes kirilowii var. japonica]) HSP 1 Score: 123.6 bits (309), Expect = 9.4e-25 Identity = 67/92 (72.83%), Postives = 77/92 (83.70%), Query Frame = 0
BLAST of Lag0001808 vs. NCBI nr
Match: XP_022158193.1 (ribosome-inactivating protein bryodin II-like [Momordica charantia]) HSP 1 Score: 114.8 bits (286), Expect = 4.4e-22 Identity = 61/92 (66.30%), Postives = 76/92 (82.61%), Query Frame = 0
BLAST of Lag0001808 vs. NCBI nr
Match: P98184.1 (RecName: Full=Ribosome-inactivating protein bryodin II; AltName: Full=BD2; AltName: Full=rRNA N-glycosidase; Flags: Precursor [Bryonia dioica]) HSP 1 Score: 113.6 bits (283), Expect = 9.7e-22 Identity = 62/91 (68.13%), Postives = 74/91 (81.32%), Query Frame = 0
BLAST of Lag0001808 vs. NCBI nr
Match: XP_022158192.1 (ribosome-inactivating protein bryodin II-like [Momordica charantia]) HSP 1 Score: 112.1 bits (279), Expect = 2.8e-21 Identity = 58/92 (63.04%), Postives = 75/92 (81.52%), Query Frame = 0
BLAST of Lag0001808 vs. NCBI nr
Match: XP_022158191.1 (ribosome-inactivating protein bryodin II-like [Momordica charantia]) HSP 1 Score: 91.7 bits (226), Expect = 4.0e-15 Identity = 47/73 (64.38%), Postives = 59/73 (80.82%), Query Frame = 0
BLAST of Lag0001808 vs. ExPASy Swiss-Prot
Match: P98184 (Ribosome-inactivating protein bryodin II OS=Bryonia dioica OX=3652 PE=1 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.3e-24 Identity = 62/91 (68.13%), Postives = 74/91 (81.32%), Query Frame = 0
BLAST of Lag0001808 vs. ExPASy Swiss-Prot
Match: P33185 (Ribosome-inactivating protein bryodin I OS=Bryonia dioica OX=3652 PE=1 SV=3) HSP 1 Score: 71.2 bits (173), Expect = 7.3e-12 Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 0
BLAST of Lag0001808 vs. ExPASy Swiss-Prot
Match: P24478 (Ribosome-inactivating protein karasurin-C OS=Trichosanthes kirilowii OX=3677 PE=1 SV=2) HSP 1 Score: 70.5 bits (171), Expect = 1.2e-11 Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = 0
BLAST of Lag0001808 vs. ExPASy Swiss-Prot
Match: Q00465 (Ribosome-inactivating protein luffin-alpha OS=Luffa aegyptiaca OX=3670 PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 3.6e-11 Identity = 38/85 (44.71%), Postives = 61/85 (71.76%), Query Frame = 0
BLAST of Lag0001808 vs. ExPASy Swiss-Prot
Match: Q5F0I3 (Ribosome-inactivating protein gynostemmin OS=Gynostemma pentaphyllum OX=182084 PE=1 SV=2) HSP 1 Score: 65.9 bits (159), Expect = 3.1e-10 Identity = 40/95 (42.11%), Postives = 57/95 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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