Lag0001780 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0001780
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	CBS domain-containing protein CBSX1, chloroplastic-like
Location	chr4: 35286109 .. 35287989 (+)
RNA-Seq Expression	Lag0001780
Synteny	Lag0001780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCGATTTCTACGCCCTACGTTCCCTCTGTTCTTCCTAATTCCCGATCGTTGCAGAGGCAATTCCGGTCGAGTCGGTCTAGGTCTCCGGCGGTCGCTTTGGCATTTTCCGGCAACCGTATGGCAAGTTCTGCGCCGGTATGCCTGAATTGGTTTGGAAATTGTGATTTTGTATTTGAATTAATGATGAGATTGGTAGTGATTGTGATTTGGTTTGTGTGTGTGTGTATGTTGTTCAGTTTAGGAGTGGATCGTATACGGTTGGAGATTTTATGACGCGGAAGGGGAATCTGCAGGTCATGAAGCCTTCTACCAGTGTTGAACAAGGTAATAATTTATCCTTATTTATTTATTTATTTGTCACCAGTTTTTAAATTAACTCTGTGTTTAAACAGCATTGGAGGTTCTCGTGGAGAAGAGTCTGTCTGGATTTCCTGTGGTTGATGACGACTGGAAACTGGTGATTTTTTTTTAAGCATTTCACCTTTCTTAACCCCGCTTCATAACCAATTGGTTTTTTAAAACATTTTATTTGAAGATGAGTTCTTTCCTCATAAAGCAAAGCAAATTTTGGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATGTTAATACAATGGTTAAGTTTGGAATTTAATTTGATAAAATTGAAAGTTAAATATTATAATTGATGAGCTCAGCAAAAAAGGTATTACAATTGATACAACCTACTAAATTTGGAGTCAAAATGGATACGTTAATAACTATTGTTAAATTATATTACAGGTTGGTGTTGTCTCCGATTACGATTTGTTAGCTTTGGACTCCATTTCAGGTACAACAATATTACAACCATTGTGTTTTAAATTCATATAAAAAATAAATATGGTAGTTTCTTTATGTATAACAAATCTTTCTGAATTAACGATTTAAATAACAAATAAGAAATACAAATTCATTTAAAATTCTTAATAATATACTCGTGACTTTTCACGAACAAAAAACTACCCGTGTCAATTAATTGTCGGCAAAAATAATACTAACACATATGTTAAAGTTCCATAGAAATTTAATGGTAAAGAGTTAAGACACAATATTTTTACGCAGAATTTAGAAAATTAAAAAAAAAAAAAAGATTGAAATGGAATTAATATAAAGATTTAAAAGTTTGGAATAAGATTTTAAATTTATAATTGTCATTTAATATTTGGCATAGGTGTAGGTGGTGGTGAGACTAATATATTCCCAGATGTGAACAGTAGCTGGAAAGTAAGTCAAAATCTTTATTCTCTTTTTACCAATTTAACTTATATTCTTTTAATTGAAAAATAAATAAGAAAAGAAAAAACTTATTTAAACTTGAATATTGGCAGAGCTTCAAGGAGATACAAAAATTGTTAAGCAAGACCAACGGGGAAGTTGTAGGAGATTTGATGACACCTGCTCCATTGGTTGTTCGTGAAACCACTAATCTGGAAAATGCTGCCAGGTTCATCTCATACCACATATTTATAGCTTTTGTTCGTACGTTACGTCATATCAAATCATCACTTTTGATTAGAACGTCAAGTTAACGAAGTTGAAATGTATACTAAATTTGTAATTTGATCTAAAAACTTTAAACGAAGACAATACTTGTGTTTGTCCGTTTGTTGTAGGTTGTTGCTTGAAACAAAGTTCCATCGTTTACCGGTGGTAGATTGTGATGGCAAACTGGTAAGCTTATATTCTTACCTCTCACATTTTCTTTCTTTTCAAACACATTCTTCATGAACTTATGGGCATCTCTTTTGTCAAATTGTTTGTGTTAATTTTTCAAAGGTGGGAATCATTGCGAGAGAAGACATTGTTAGAGCTGGTATGCAGATGAAACGCGTTCAAAAGAGTTAA

mRNA sequence

ATGGCCTCGATTTCTACGCCCTACGTTCCCTCTGTTCTTCCTAATTCCCGATCGTTGCAGAGGCAATTCCGGTCGAGTCGGTCTAGGTCTCCGGCGGTCGCTTTGGCATTTTCCGGCAACCGTATGGCAAGTTCTGCGCCGTTTAGGAGTGGATCGTATACGGTTGGAGATTTTATGACGCGGAAGGGGAATCTGCAGGTCATGAAGCCTTCTACCAGTGTTGAACAAGCATTGGAGGTTCTCGTGGAGAAGAGTCTGTCTGGATTTCCTGTGGTTGATGACGACTGGAAACTGGTTGGTGTTGTCTCCGATTACGATTTGTTAGCTTTGGACTCCATTTCAGGTGTAGGTGGTGGTGAGACTAATATATTCCCAGATGTGAACAGTAGCTGGAAAAGCTTCAAGGAGATACAAAAATTGTTAAGCAAGACCAACGGGGAAGTTGTAGGAGATTTGATGACACCTGCTCCATTGGTTGTTCGTGAAACCACTAATCTGGAAAATGCTGCCAGGTTGTTGCTTGAAACAAAGTTCCATCGTTTACCGGTGGTAGATTGTGATGGCAAACTGGTGGGAATCATTGCGAGAGAAGACATTGTTAGAGCTGGTATGCAGATGAAACGCGTTCAAAAGAGTTAA

Coding sequence (CDS)

ATGGCCTCGATTTCTACGCCCTACGTTCCCTCTGTTCTTCCTAATTCCCGATCGTTGCAGAGGCAATTCCGGTCGAGTCGGTCTAGGTCTCCGGCGGTCGCTTTGGCATTTTCCGGCAACCGTATGGCAAGTTCTGCGCCGTTTAGGAGTGGATCGTATACGGTTGGAGATTTTATGACGCGGAAGGGGAATCTGCAGGTCATGAAGCCTTCTACCAGTGTTGAACAAGCATTGGAGGTTCTCGTGGAGAAGAGTCTGTCTGGATTTCCTGTGGTTGATGACGACTGGAAACTGGTTGGTGTTGTCTCCGATTACGATTTGTTAGCTTTGGACTCCATTTCAGGTGTAGGTGGTGGTGAGACTAATATATTCCCAGATGTGAACAGTAGCTGGAAAAGCTTCAAGGAGATACAAAAATTGTTAAGCAAGACCAACGGGGAAGTTGTAGGAGATTTGATGACACCTGCTCCATTGGTTGTTCGTGAAACCACTAATCTGGAAAATGCTGCCAGGTTGTTGCTTGAAACAAAGTTCCATCGTTTACCGGTGGTAGATTGTGATGGCAAACTGGTGGGAATCATTGCGAGAGAAGACATTGTTAGAGCTGGTATGCAGATGAAACGCGTTCAAAAGAGTTAA

Protein sequence

MASISTPYVPSVLPNSRSLQRQFRSSRSRSPAVALAFSGNRMASSAPFRSGSYTVGDFMTRKGNLQVMKPSTSVEQALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNSSWKSFKEIQKLLSKTNGEVVGDLMTPAPLVVRETTNLENAARLLLETKFHRLPVVDCDGKLVGIIAREDIVRAGMQMKRVQKS

Homology

[Close]

BLAST of Lag0001780 vs. NCBI nr
Match: XP_038888405.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 343.2 bits (879), Expect = 1.6e-90
Identity = 183/220 (83.18%), Postives = 194/220 (88.18%), Query Frame = 0


Query: 1   MASISTPYVPSVLPNSRSLQRQFR------------SSRSRSPAVALAFSGNRMASSAPF 60
           MASISTPYVPSVLPNSR LQ QFR            SS  RSPAVALAFSG+R+ASS+ F
Sbjct: 1   MASISTPYVPSVLPNSRLLQTQFRLTYAGAGINSSPSSLFRSPAVALAFSGHRVASSSQF 60

Query: 61  RSGSYTVGDFMTRKGNLQVMKPSTSVEQALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLL 120
           R GSYTVGDFMT+KGNLQV+KPSTSV++ALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLL
Sbjct: 61  RIGSYTVGDFMTKKGNLQVLKPSTSVDEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLL 120

Query: 121 ALDSISGVGGGETNIFPDVNSSWKSFKEIQKLLSKTNGEVVGDLMTPAPLVVRETTNLEN 180
           ALDSISGVG  E NIFPDVNSSWKSFK IQKLLSK NGEVVGDLMTPAPLVVRET NLE+
Sbjct: 121 ALDSISGVGDVEANIFPDVNSSWKSFKLIQKLLSKKNGEVVGDLMTPAPLVVRETMNLES 180

Query: 181 AARLLLETKFHRLPVVDCDGKLVGIIAREDIVRAGMQMKR 209
           AARLLLETKFH LPVVDC+GKL+GII REDIVRAG+QMKR
Sbjct: 181 AARLLLETKFHLLPVVDCEGKLMGIITREDIVRAGLQMKR 220

[Close]

BLAST of Lag0001780 vs. NCBI nr
Match: XP_004136971.1 (CBS domain-containing protein CBSX2, chloroplastic [Cucumis sativus] >KGN43916.1 hypothetical protein Csa_017254 [Cucumis sativus])

HSP 1 Score: 338.2 bits (866), Expect = 5.2e-89
Identity = 175/212 (82.55%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 1   MASISTPYVPSVLPNSRSLQRQFRSSRSRSPAVALAFSGNRMASSAPFRSGSYTVGDFMT 60
           MASISTPYVPSV PNSR    Q R +  RSP VALAFSG+R++SS PFR+GSY VGDFMT
Sbjct: 1   MASISTPYVPSVFPNSRLPTTQLRHAGYRSPVVALAFSGHRVSSSIPFRNGSYAVGDFMT 60

Query: 61  RKGNLQVMKPSTSVEQALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGE 120
           +KGNLQV+KPSTSVE+ALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGG+
Sbjct: 61  KKGNLQVLKPSTSVEEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGD 120

Query: 121 -TNIFPDVNSSWKSFKEIQKLLSKTNGEVVGDLMTPAPLVVRETTNLENAARLLLETKFH 180
             NIFPDVN SW+SFK IQKLLSK NGEVVGDLMTPAPLVV ET N ENAARLLLETKFH
Sbjct: 121 IINIFPDVNCSWESFKLIQKLLSKKNGEVVGDLMTPAPLVVSETMNFENAARLLLETKFH 180

Query: 181 RLPVVDCDGKLVGIIAREDIVRAGMQMKRVQK 212
           RLPVVDC+GKLVGII REDIVR G++MKR Q+
Sbjct: 181 RLPVVDCEGKLVGIITREDIVRVGLEMKRTQE 212

[Close]

BLAST of Lag0001780 vs. NCBI nr
Match: XP_022155650.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 330.5 bits (846), Expect = 1.1e-86
Identity = 176/220 (80.00%), Postives = 196/220 (89.09%), Query Frame = 0


Query: 1   MASISTPYV-PSVLPNSRSLQRQFRS------SRSRSPAVALAFSGNRMASSAPFRSGSY 60
           MASISTPYV P++LPNSR LQR+FRS      S +RSP+V  A SG+R+A+SAP RSGSY
Sbjct: 1   MASISTPYVPPALLPNSRPLQRRFRSSAAFSPSSNRSPSVVSALSGHRIANSAPSRSGSY 60

Query: 61  TVGDFMTRKGNLQVMKPSTSVEQALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSI 120
           TVGDFMT+KGNLQV+KPST++++ALEVLVE  LSGFPVVD DWKLVGVVSDYDLLA+DSI
Sbjct: 61  TVGDFMTKKGNLQVVKPSTTIDEALEVLVENKLSGFPVVDGDWKLVGVVSDYDLLAVDSI 120

Query: 121 SGVGGG--ETNIFPDVNSSWKSFKEIQKLLSKTNGEVVGDLMTPAPLVVRETTNLENAAR 180
           SGVGGG  ETNIFPDVN SWKSFKEIQKL+SKTNGEV+GDLMTPAPLVVRETT+LENAAR
Sbjct: 121 SGVGGGDWETNIFPDVNISWKSFKEIQKLVSKTNGEVIGDLMTPAPLVVRETTDLENAAR 180

Query: 181 LLLETKFHRLPVVDCDGKLVGIIAREDIVRAGMQ-MKRVQ 211
           LLLETKFH LPVVDCDGKLVG I REDIV+AG+Q MKR Q
Sbjct: 181 LLLETKFHSLPVVDCDGKLVGNITREDIVKAGLQIMKRTQ 220

[Close]

BLAST of Lag0001780 vs. NCBI nr
Match: TYK06762.1 (CBS domain-containing protein CBSX2 [Cucumis melo var. makuwa])

HSP 1 Score: 321.2 bits (822), Expect = 6.5e-84
Identity = 172/219 (78.54%), Postives = 187/219 (85.39%), Query Frame = 0


Query: 1   MASISTPYVPSVLPNSRSLQRQFR---------SSRSRSPAVALAFSGNRMASSAPFR-S 60
           MASISTPYVPS   NSR    QFR         SS  RSP +ALAFSG+R+ASS PFR +
Sbjct: 1   MASISTPYVPSFFSNSRLPTTQFRHAGTFDSSPSSLFRSPVLALAFSGHRVASSIPFRNN 60

Query: 61  GSYTVGDFMTRKGNLQVMKPSTSVEQALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLAL 120
           GSYTVGDFMT+KGNL V+KPSTS+E+ALEVLVEKS+SGFPVVDDDWKLVGVVSDYDLLAL
Sbjct: 61  GSYTVGDFMTKKGNLLVLKPSTSIEEALEVLVEKSVSGFPVVDDDWKLVGVVSDYDLLAL 120

Query: 121 DSISGVGGGE-TNIFPDVNSSWKSFKEIQKLLSKTNGEVVGDLMTPAPLVVRETTNLENA 180
           DSISGVGGG+  NIFPDVN SW+SFK IQKLLSK NGE+VGDLMTPAPLVV ET N ENA
Sbjct: 121 DSISGVGGGDIINIFPDVNCSWESFKLIQKLLSKKNGEIVGDLMTPAPLVVSETMNFENA 180

Query: 181 ARLLLETKFHRLPVVDCDGKLVGIIAREDIVRAGMQMKR 209
           ARLLLETKFHRLPVVDC+GKLVGII REDIVR G++MKR
Sbjct: 181 ARLLLETKFHRLPVVDCEGKLVGIITREDIVRVGLEMKR 219

[Close]

BLAST of Lag0001780 vs. NCBI nr
Match: XP_008455519.1 (PREDICTED: CBS domain-containing protein CBSX2, chloroplastic [Cucumis melo])

HSP 1 Score: 301.6 bits (771), Expect = 5.3e-78
Identity = 161/205 (78.54%), Postives = 176/205 (85.85%), Query Frame = 0


Query: 15  NSRSLQRQFR---------SSRSRSPAVALAFSGNRMASSAPFR-SGSYTVGDFMTRKGN 74
           NSR    QFR         SS  RSP +ALAFSG+R+ASS PFR +GSYTVGDFMT+KGN
Sbjct: 23  NSRLPTTQFRHAGTFDSSPSSLFRSPVLALAFSGHRVASSIPFRNNGSYTVGDFMTKKGN 82

Query: 75  LQVMKPSTSVEQALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGE-TNI 134
           L V+KPSTS+E+ALEVLVEKS+SGFPVVDDDWKLVGVVSDYDLLALDSISGVGGG+  NI
Sbjct: 83  LLVLKPSTSIEEALEVLVEKSVSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGDIINI 142

Query: 135 FPDVNSSWKSFKEIQKLLSKTNGEVVGDLMTPAPLVVRETTNLENAARLLLETKFHRLPV 194
           FPDVN SW+SFK IQKLLSK NGE+VGDLMTPAPLVV ET N ENAARLLLETKFHRLPV
Sbjct: 143 FPDVNCSWESFKLIQKLLSKKNGEIVGDLMTPAPLVVSETMNFENAARLLLETKFHRLPV 202

Query: 195 VDCDGKLVGIIAREDIVRAGMQMKR 209
           VDC+GKLVGII REDIVR G++MKR
Sbjct: 203 VDCEGKLVGIITREDIVRVGLEMKR 227

[Close]

BLAST of Lag0001780 vs. ExPASy Swiss-Prot
Match: O23193 (CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX1 PE=1 SV=2)

HSP 1 Score: 243.0 bits (619), Expect = 3.0e-63
Identity = 128/215 (59.53%), Postives = 169/215 (78.60%), Query Frame = 0


Query: 2   ASISTPYVPSVLPNSRSLQ--------RQFRSSRSRSPAVALAFSGNRMASSAPFRSGSY 61
           +S S+PY+  +LP   S+Q        R F  S+SR P+ + A     M +S+  RSG Y
Sbjct: 19  SSPSSPYL--LLPRFLSVQPCHKFTFSRSF-PSKSRIPSASSAAGSTLMTNSSSPRSGVY 78

Query: 62  TVGDFMTRKGNLQVMKPSTSVEQALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSI 121
           TVG+FMT+K +L V+KP+T+V++ALE+LVE  ++GFPV+D+DWKLVG+VSDYDLLALDSI
Sbjct: 79  TVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSI 138

Query: 122 SGVGGGETNIFPDVNSSWKSFKEIQKLLSKTNGEVVGDLMTPAPLVVRETTNLENAARLL 181
           SG G  E ++FP+V+S+WK+F  +QKLLSKTNG++VGDLMTPAPLVV E TNLE+AA++L
Sbjct: 139 SGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKIL 198

Query: 182 LETKFHRLPVVDCDGKLVGIIAREDIVRAGMQMKR 209
           LETK+ RLPVVD DGKLVGII R ++VRA +Q+KR
Sbjct: 199 LETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKR 230

[Close]

BLAST of Lag0001780 vs. ExPASy Swiss-Prot
Match: Q9C5D0 (CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX2 PE=1 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 7.3e-62
Identity = 125/199 (62.81%), Postives = 158/199 (79.40%), Query Frame = 0


Query: 11  SVLP-NSRSLQRQFRSSRSRSPAVALAFSGNRMASSAPFRSGSYTVGDFMTRKGNLQVMK 70
           S+LP ++R     F  S + S   A   S N   +S P ++G YTVGDFMT + NL V+K
Sbjct: 35  SLLPLSNRRRSSTFSPSITVSAFFAAPASVNN-NNSVPAKNGGYTVGDFMTPRQNLHVVK 94

Query: 71  PSTSVEQALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNS 130
           PSTSV+ ALE+LVEK ++G PV+DD+W LVGVVSDYDLLALDSISG    +TN+FPDV+S
Sbjct: 95  PSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 154

Query: 131 SWKSFKEIQKLLSKTNGEVVGDLMTPAPLVVRETTNLENAARLLLETKFHRLPVVDCDGK 190
           +WK+F E+QKL+SKT G+VVGDLMTP+PLVVR++TNLE+AARLLLETKF RLPVVD DGK
Sbjct: 155 TWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGK 214

Query: 191 LVGIIAREDIVRAGMQMKR 209
           L+GI+ R ++VRA +Q+KR
Sbjct: 215 LIGILTRGNVVRAALQIKR 232

[Close]

BLAST of Lag0001780 vs. ExPASy Swiss-Prot
Match: O67820 (Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=guaB PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-08
Identity = 41/138 (29.71%), Postives = 72/138 (52.17%), Query Frame = 0


Query: 64  NLQVMKPSTSVEQALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNI 123
           N   +KP T V++AL+++ +  +SG PVVD++ KL+G++++ DL               I
Sbjct: 99  NPVTVKPDTRVKEALDIMAKYKISGVPVVDEERKLIGILTNRDL-------------RFI 158

Query: 124 FPDVNSSWKSFKEIQKLLSKTNGEVVGDLMTPAPLVVRETTNLENAARLLLETKFHRLPV 183
            P+  S     K + + ++K N       +  AP    E   L+ A  +  + K  +LP+
Sbjct: 159 KPEDYS-----KPVSEFMTKEN-------LITAP----EGITLDEAEEIFRKYKIEKLPI 207

Query: 184 VDCDGKLVGIIAREDIVR 202
           VD +GK+ G+I  +DIV+
Sbjct: 219 VDKEGKIKGLITIKDIVK 207

[Close]

BLAST of Lag0001780 vs. ExPASy Swiss-Prot
Match: Q58821 (Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1426 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-08
Identity = 34/125 (27.20%), Postives = 66/125 (52.80%), Query Frame = 0


Query: 83  EKSLSGFPVVDDDWKLVGVVSDYDLLAL-----DSISGVGGGETNIFPDVNSSWKSFKEI 142
           +  +SG PV++ D KLVG++S+ D++       + ++ +     ++      +    +E 
Sbjct: 42  KNKISGAPVLNKDGKLVGIISESDIVKTIVTHNEDLNLILPSPLDLIELPLKTALKIEEF 101

Query: 143 QKLLSKTNGEVVGDLMTPAPLVVRETTNLENAARLLLETKFHRLPVVDCDGKLVGIIARE 202
            + L       V D+MT   +V +    + +AA+L+++    RLPVVD +G L+GI+ R 
Sbjct: 102 MEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNLIGIVTRG 161

[Close]

BLAST of Lag0001780 vs. ExPASy Swiss-Prot
Match: P42851 (Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=guaB PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.6e-08
Identity = 36/131 (27.48%), Postives = 65/131 (49.62%), Query Frame = 0


Query: 70  PSTSVEQALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNS 129
           P  +++ AL ++ +  + G PVV++D ++VG+++  D+ A +                  
Sbjct: 108 PDETIDYALFLMEKHGIDGLPVVEED-RVVGIITKKDIAARE------------------ 167

Query: 130 SWKSFKEIQKLLSKTNGEVVGDLMTPAPLVVRETTNLENAARLLLETKFHRLPVVDCDGK 189
                           G  V +LMT   + V E+ ++E A ++++E +  RLPVV+ DGK
Sbjct: 168 ----------------GRTVKELMTREVITVPESVDVEEALKIMMENRIDRLPVVNEDGK 203

Query: 190 LVGIIAREDIV 201
           LVG+I   D+V
Sbjct: 228 LVGLITMSDLV 203

[Close]

BLAST of Lag0001780 vs. ExPASy TrEMBL
Match: A0A0A0K7X9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073520 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.5e-89
Identity = 175/212 (82.55%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 1   MASISTPYVPSVLPNSRSLQRQFRSSRSRSPAVALAFSGNRMASSAPFRSGSYTVGDFMT 60
           MASISTPYVPSV PNSR    Q R +  RSP VALAFSG+R++SS PFR+GSY VGDFMT
Sbjct: 1   MASISTPYVPSVFPNSRLPTTQLRHAGYRSPVVALAFSGHRVSSSIPFRNGSYAVGDFMT 60

Query: 61  RKGNLQVMKPSTSVEQALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGE 120
           +KGNLQV+KPSTSVE+ALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGG+
Sbjct: 61  KKGNLQVLKPSTSVEEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGD 120

Query: 121 -TNIFPDVNSSWKSFKEIQKLLSKTNGEVVGDLMTPAPLVVRETTNLENAARLLLETKFH 180
             NIFPDVN SW+SFK IQKLLSK NGEVVGDLMTPAPLVV ET N ENAARLLLETKFH
Sbjct: 121 IINIFPDVNCSWESFKLIQKLLSKKNGEVVGDLMTPAPLVVSETMNFENAARLLLETKFH 180

Query: 181 RLPVVDCDGKLVGIIAREDIVRAGMQMKRVQK 212
           RLPVVDC+GKLVGII REDIVR G++MKR Q+
Sbjct: 181 RLPVVDCEGKLVGIITREDIVRVGLEMKRTQE 212

[Close]

BLAST of Lag0001780 vs. ExPASy TrEMBL
Match: A0A6J1DN09 (CBS domain-containing protein CBSX1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111022731 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 5.2e-87
Identity = 176/220 (80.00%), Postives = 196/220 (89.09%), Query Frame = 0


Query: 1   MASISTPYV-PSVLPNSRSLQRQFRS------SRSRSPAVALAFSGNRMASSAPFRSGSY 60
           MASISTPYV P++LPNSR LQR+FRS      S +RSP+V  A SG+R+A+SAP RSGSY
Sbjct: 1   MASISTPYVPPALLPNSRPLQRRFRSSAAFSPSSNRSPSVVSALSGHRIANSAPSRSGSY 60

Query: 61  TVGDFMTRKGNLQVMKPSTSVEQALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSI 120
           TVGDFMT+KGNLQV+KPST++++ALEVLVE  LSGFPVVD DWKLVGVVSDYDLLA+DSI
Sbjct: 61  TVGDFMTKKGNLQVVKPSTTIDEALEVLVENKLSGFPVVDGDWKLVGVVSDYDLLAVDSI 120

Query: 121 SGVGGG--ETNIFPDVNSSWKSFKEIQKLLSKTNGEVVGDLMTPAPLVVRETTNLENAAR 180
           SGVGGG  ETNIFPDVN SWKSFKEIQKL+SKTNGEV+GDLMTPAPLVVRETT+LENAAR
Sbjct: 121 SGVGGGDWETNIFPDVNISWKSFKEIQKLVSKTNGEVIGDLMTPAPLVVRETTDLENAAR 180

Query: 181 LLLETKFHRLPVVDCDGKLVGIIAREDIVRAGMQ-MKRVQ 211
           LLLETKFH LPVVDCDGKLVG I REDIV+AG+Q MKR Q
Sbjct: 181 LLLETKFHSLPVVDCDGKLVGNITREDIVKAGLQIMKRTQ 220

[Close]

BLAST of Lag0001780 vs. ExPASy TrEMBL
Match: A0A5D3C646 (CBS domain-containing protein CBSX2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00630 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.2e-84
Identity = 172/219 (78.54%), Postives = 187/219 (85.39%), Query Frame = 0


Query: 1   MASISTPYVPSVLPNSRSLQRQFR---------SSRSRSPAVALAFSGNRMASSAPFR-S 60
           MASISTPYVPS   NSR    QFR         SS  RSP +ALAFSG+R+ASS PFR +
Sbjct: 1   MASISTPYVPSFFSNSRLPTTQFRHAGTFDSSPSSLFRSPVLALAFSGHRVASSIPFRNN 60

Query: 61  GSYTVGDFMTRKGNLQVMKPSTSVEQALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLAL 120
           GSYTVGDFMT+KGNL V+KPSTS+E+ALEVLVEKS+SGFPVVDDDWKLVGVVSDYDLLAL
Sbjct: 61  GSYTVGDFMTKKGNLLVLKPSTSIEEALEVLVEKSVSGFPVVDDDWKLVGVVSDYDLLAL 120

Query: 121 DSISGVGGGE-TNIFPDVNSSWKSFKEIQKLLSKTNGEVVGDLMTPAPLVVRETTNLENA 180
           DSISGVGGG+  NIFPDVN SW+SFK IQKLLSK NGE+VGDLMTPAPLVV ET N ENA
Sbjct: 121 DSISGVGGGDIINIFPDVNCSWESFKLIQKLLSKKNGEIVGDLMTPAPLVVSETMNFENA 180

Query: 181 ARLLLETKFHRLPVVDCDGKLVGIIAREDIVRAGMQMKR 209
           ARLLLETKFHRLPVVDC+GKLVGII REDIVR G++MKR
Sbjct: 181 ARLLLETKFHRLPVVDCEGKLVGIITREDIVRVGLEMKR 219

[Close]

BLAST of Lag0001780 vs. ExPASy TrEMBL
Match: A0A1S3C189 (CBS domain-containing protein CBSX2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495670 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.6e-78
Identity = 161/205 (78.54%), Postives = 176/205 (85.85%), Query Frame = 0


Query: 15  NSRSLQRQFR---------SSRSRSPAVALAFSGNRMASSAPFR-SGSYTVGDFMTRKGN 74
           NSR    QFR         SS  RSP +ALAFSG+R+ASS PFR +GSYTVGDFMT+KGN
Sbjct: 23  NSRLPTTQFRHAGTFDSSPSSLFRSPVLALAFSGHRVASSIPFRNNGSYTVGDFMTKKGN 82

Query: 75  LQVMKPSTSVEQALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGE-TNI 134
           L V+KPSTS+E+ALEVLVEKS+SGFPVVDDDWKLVGVVSDYDLLALDSISGVGGG+  NI
Sbjct: 83  LLVLKPSTSIEEALEVLVEKSVSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGDIINI 142

Query: 135 FPDVNSSWKSFKEIQKLLSKTNGEVVGDLMTPAPLVVRETTNLENAARLLLETKFHRLPV 194
           FPDVN SW+SFK IQKLLSK NGE+VGDLMTPAPLVV ET N ENAARLLLETKFHRLPV
Sbjct: 143 FPDVNCSWESFKLIQKLLSKKNGEIVGDLMTPAPLVVSETMNFENAARLLLETKFHRLPV 202

Query: 195 VDCDGKLVGIIAREDIVRAGMQMKR 209
           VDC+GKLVGII REDIVR G++MKR
Sbjct: 203 VDCEGKLVGIITREDIVRVGLEMKR 227

[Close]

BLAST of Lag0001780 vs. ExPASy TrEMBL
Match: A0A5A7SKP3 (CBS domain-containing protein CBSX2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00630 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 3.0e-74
Identity = 159/218 (72.94%), Postives = 175/218 (80.28%), Query Frame = 0


Query: 1   MASISTPYVPSVLPNSRSLQRQFR---------SSRSRSPAVALAFSGNRMASSAPFR-S 60
           MASISTPYVPS   NSR    QFR         SS  RSP +ALAFSG+R+ASS PFR +
Sbjct: 1   MASISTPYVPSFFSNSRLPTTQFRHAGTFDSSPSSLFRSPVLALAFSGHRVASSIPFRNN 60

Query: 61  GSYTVGDFMTRKGNLQVMKPSTSVEQALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLAL 120
           GSYTVGDFMT+KGNL V+KPSTS+E+ALEVLVEKS+SGFPVVDDDWKLVGVVSDYDLLAL
Sbjct: 61  GSYTVGDFMTKKGNLLVLKPSTSIEEALEVLVEKSVSGFPVVDDDWKLVGVVSDYDLLAL 120

Query: 121 DSISGVGGGETNIFPDVNSSWKSFKEIQKLLSKTNGEVVGDLMTPAPLVVRETTNLENAA 180
           DSIS        +   +   W+SFK IQKLLSK NGE+VGDLMTPAPLVV ET N ENAA
Sbjct: 121 DSIS--------VGLIIMLLWQSFKLIQKLLSKKNGEIVGDLMTPAPLVVSETMNFENAA 180

Query: 181 RLLLETKFHRLPVVDCDGKLVGIIAREDIVRAGMQMKR 209
           RLLLETKFHRLPVVDC+GKLVGII REDIVR G++MKR
Sbjct: 181 RLLLETKFHRLPVVDCEGKLVGIITREDIVRVGLEMKR 210

[Close]

BLAST of Lag0001780 vs. TAIR 10
Match: AT4G36910.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 243.0 bits (619), Expect = 2.1e-64
Identity = 128/215 (59.53%), Postives = 169/215 (78.60%), Query Frame = 0


Query: 2   ASISTPYVPSVLPNSRSLQ--------RQFRSSRSRSPAVALAFSGNRMASSAPFRSGSY 61
           +S S+PY+  +LP   S+Q        R F  S+SR P+ + A     M +S+  RSG Y
Sbjct: 19  SSPSSPYL--LLPRFLSVQPCHKFTFSRSF-PSKSRIPSASSAAGSTLMTNSSSPRSGVY 78

Query: 62  TVGDFMTRKGNLQVMKPSTSVEQALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSI 121
           TVG+FMT+K +L V+KP+T+V++ALE+LVE  ++GFPV+D+DWKLVG+VSDYDLLALDSI
Sbjct: 79  TVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSI 138

Query: 122 SGVGGGETNIFPDVNSSWKSFKEIQKLLSKTNGEVVGDLMTPAPLVVRETTNLENAARLL 181
           SG G  E ++FP+V+S+WK+F  +QKLLSKTNG++VGDLMTPAPLVV E TNLE+AA++L
Sbjct: 139 SGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKIL 198

Query: 182 LETKFHRLPVVDCDGKLVGIIAREDIVRAGMQMKR 209
           LETK+ RLPVVD DGKLVGII R ++VRA +Q+KR
Sbjct: 199 LETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKR 230

[Close]

BLAST of Lag0001780 vs. TAIR 10
Match: AT4G34120.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 238.4 bits (607), Expect = 5.2e-63
Identity = 125/199 (62.81%), Postives = 158/199 (79.40%), Query Frame = 0


Query: 11  SVLP-NSRSLQRQFRSSRSRSPAVALAFSGNRMASSAPFRSGSYTVGDFMTRKGNLQVMK 70
           S+LP ++R     F  S + S   A   S N   +S P ++G YTVGDFMT + NL V+K
Sbjct: 35  SLLPLSNRRRSSTFSPSITVSAFFAAPASVNN-NNSVPAKNGGYTVGDFMTPRQNLHVVK 94

Query: 71  PSTSVEQALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGETNIFPDVNS 130
           PSTSV+ ALE+LVEK ++G PV+DD+W LVGVVSDYDLLALDSISG    +TN+FPDV+S
Sbjct: 95  PSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 154

Query: 131 SWKSFKEIQKLLSKTNGEVVGDLMTPAPLVVRETTNLENAARLLLETKFHRLPVVDCDGK 190
           +WK+F E+QKL+SKT G+VVGDLMTP+PLVVR++TNLE+AARLLLETKF RLPVVD DGK
Sbjct: 155 TWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGK 214

Query: 191 LVGIIAREDIVRAGMQMKR 209
           L+GI+ R ++VRA +Q+KR
Sbjct: 215 LIGILTRGNVVRAALQIKR 232

The following BLAST results are available for this feature:

BLAST of Lag0001780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888405.1	1.6e-90	83.18	CBS domain-containing protein CBSX1, chloroplastic-like [Benincasa hispida]	[more]
XP_004136971.1	5.2e-89	82.55	CBS domain-containing protein CBSX2, chloroplastic [Cucumis sativus] >KGN43916.1...	[more]
XP_022155650.1	1.1e-86	80.00	CBS domain-containing protein CBSX1, chloroplastic-like [Momordica charantia]	[more]
TYK06762.1	6.5e-84	78.54	CBS domain-containing protein CBSX2 [Cucumis melo var. makuwa]	[more]
XP_008455519.1	5.3e-78	78.54	PREDICTED: CBS domain-containing protein CBSX2, chloroplastic [Cucumis melo]	[more]

BLAST of Lag0001780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23193	3.0e-63	59.53	CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
Q9C5D0	7.3e-62	62.81	CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
O67820	1.6e-08	29.71	Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain VF5) OX=22432...	[more]
Q58821	2.1e-08	27.20	Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 430...	[more]
P42851	4.6e-08	27.48	Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus (strain ATCC 43587...	[more]

BLAST of Lag0001780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7X9	2.5e-89	82.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073520 PE=4 SV=1	[more]
A0A6J1DN09	5.2e-87	80.00	CBS domain-containing protein CBSX1, chloroplastic-like OS=Momordica charantia O...	[more]
A0A5D3C646	3.2e-84	78.54	CBS domain-containing protein CBSX2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3C189	2.6e-78	78.54	CBS domain-containing protein CBSX2, chloroplastic OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5A7SKP3	3.0e-74	72.94	CBS domain-containing protein CBSX2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]

BLAST of Lag0001780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36910.1	2.1e-64	59.53	Cystathionine beta-synthase (CBS) family protein	[more]
AT4G34120.1	5.2e-63	62.81	Cystathionine beta-synthase (CBS) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000644	CBS domain	SMART	SM00116	cbs_1	coord: 64..112 e-value: 1.5E-6 score: 37.8 coord: 156..204 e-value: 2.2E-11 score: 53.8
IPR000644	CBS domain	PFAM	PF00571	CBS	coord: 55..109 e-value: 4.9E-12 score: 46.1 coord: 149..202 e-value: 3.3E-15 score: 56.3
IPR000644	CBS domain	PROSITE	PS51371	CBS	coord: 59..121 score: 12.607495
IPR000644	CBS domain	PROSITE	PS51371	CBS	coord: 153..209 score: 14.282863
None	No IPR available	GENE3D	3.10.580.10		coord: 50..210 e-value: 7.6E-64 score: 216.2
None	No IPR available	PANTHER	PTHR48108	CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC	coord: 10..209
None	No IPR available	PANTHER	PTHR48108:SF12	CBS DOMAIN-CONTAINING PROTEIN CBSX1, CHLOROPLASTIC-LIKE	coord: 10..209
None	No IPR available	SUPERFAMILY	54631	CBS-domain pair	coord: 47..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0001780.1	Lag0001780.1	mRNA