Lag0001711 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0001711
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionMATH domain and coiled-coil domain-containing protein
Locationchr4: 34579379 .. 34580685 (+)
RNA-Seq ExpressionLag0001711
SyntenyLag0001711
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGAGGATGACGTTCTATGGACTACTACTTCTGAGGTTAATGTTGTGTTTACATTTCTTGTTTACGATCATCTCAAAGACAAATATTTGACCGTCCAAGGTAAACAGACCAGCTCACTCTAAAGTCAAAACATGTTTAGTATGTTAGCTTACATTGAGGCTTTGTTTGTTGTTACTAATTCAGATGGGTAAGACGTTTTCATGTCACTAGGAAAGAGTGGGGTTTTGAAAAGTTGGTTTCACTTGACACTTTCAATGATGTTTCAAATGGGTTGTTGGTTGACGATTGTTGTATATTTGGAGTTGACGTTATTGTTATGAAATGTGAAGGGAATGGGGAGGTCATTTCCTTGATCAAGCAACCAAAAAATGACAAATATACGTGGAAATTCACCAACTTTTCACAAAAATATTTGAATCGGTATGAATCGGATCCTTTTACAGTGGAAAACTACCGTTGGTATGTAAATTGTTTTGATTATATATTCAATTATTTCAGAAACTTGCATATGCAGTACGGTATTATATATTTACATATCCATCATTCAGGAAAATACGCCTATATCCTACAGGAGACACCCAAGCGAAGACTGGCTATTTGTCCTTGTACTTGATGTTTGATAGTTACAAGGAGCTTCCCCAAGGTTTTCAAGTTTACGTTGAATGGGAGATGTCTGTATTGAGCCAATTTGGAGTTGGGCACATAAATTGTACAGGTAATTAACTACTTTTAACTCTAAACTGCAAATTAATATCTCGTTTGATATATAACCTTTTTTTATTTTATTGATACTAAAATCAAAAAATTTATAGGTGGAAGTATGTGTGCATAAGCTTAATTTTCATAAACCAAAAACCAAAAATCAAATAATTATCAAACGGGACCTAAAAGTTTTCCTGGATCAATTTTTGTTTAAAAGAACTTTTAAAAGGGTGATAATGCATTTAACTAAATAAAACCTTTTAAAGATTTTTATTGTGTTTGATACATAGTCAAAAGTGCTACCGAAAATAACACTTTGTTTTAGAGGGAGCGCTAAATCAAAGGCTAATTCTACTTAGGAAACAAATGGTGTTACTTTAGGACATTATTCTCAAGAGTGTTTTTTTAATGTGCAGATAAACATTGGTTTGATGATAAAACAAGCAGCTCGGGTTCACATTTTATGTCATTGAGTGATCTCAAGGAATCAACTCACGGCTTTCTTCGTGATGATACTCTGATCGTTGAAGTGAAAATTAATGTTATTTCTACCATAAAAAAAATTTATAAAAAGGGAAATGCTGCTGCCTATACTAGCTAG

mRNA sequence

ATGATTGAGGATGACGTTCTATGGACTACTACTTCTGAGGTTAATGTTGTGTTTACATTTCTTGTTTACGATCATCTCAAAGACAAATATTTGACCGTCCAAGGGAATGGGGAGGTCATTTCCTTGATCAAGCAACCAAAAAATGACAAATATACGTGGAAATTCACCAACTTTTCACAAAAATATTTGAATCGGTATGAATCGGATCCTTTTACAGTGGAAAACTACCGTTGGAAAATACGCCTATATCCTACAGGAGACACCCAAGCGAAGACTGGCTATTTGTCCTTGTACTTGATGTTTGATAGTTACAAGGAGCTTCCCCAAGGTTTTCAAGTTTACGTTGAATGGGAGATGTCTGTATTGAGCCAATTTGGAGTTGGGCACATAAATTGTACAGATAAACATTGGTTTGATGATAAAACAAGCAGCTCGGGTTCACATTTTATGTCATTGAGTGATCTCAAGGAATCAACTCACGGCTTTCTTCGTGATGATACTCTGATCGTTGAAGTGAAAATTAATGTTATTTCTACCATAAAAAAAATTTATAAAAAGGGAAATGCTGCTGCCTATACTAGCTAG

Coding sequence (CDS)

ATGATTGAGGATGACGTTCTATGGACTACTACTTCTGAGGTTAATGTTGTGTTTACATTTCTTGTTTACGATCATCTCAAAGACAAATATTTGACCGTCCAAGGGAATGGGGAGGTCATTTCCTTGATCAAGCAACCAAAAAATGACAAATATACGTGGAAATTCACCAACTTTTCACAAAAATATTTGAATCGGTATGAATCGGATCCTTTTACAGTGGAAAACTACCGTTGGAAAATACGCCTATATCCTACAGGAGACACCCAAGCGAAGACTGGCTATTTGTCCTTGTACTTGATGTTTGATAGTTACAAGGAGCTTCCCCAAGGTTTTCAAGTTTACGTTGAATGGGAGATGTCTGTATTGAGCCAATTTGGAGTTGGGCACATAAATTGTACAGATAAACATTGGTTTGATGATAAAACAAGCAGCTCGGGTTCACATTTTATGTCATTGAGTGATCTCAAGGAATCAACTCACGGCTTTCTTCGTGATGATACTCTGATCGTTGAAGTGAAAATTAATGTTATTTCTACCATAAAAAAAATTTATAAAAAGGGAAATGCTGCTGCCTATACTAGCTAG

Protein sequence

MIEDDVLWTTTSEVNVVFTFLVYDHLKDKYLTVQGNGEVISLIKQPKNDKYTWKFTNFSQKYLNRYESDPFTVENYRWKIRLYPTGDTQAKTGYLSLYLMFDSYKELPQGFQVYVEWEMSVLSQFGVGHINCTDKHWFDDKTSSSGSHFMSLSDLKESTHGFLRDDTLIVEVKINVISTIKKIYKKGNAAAYTS
Homology
BLAST of Lag0001711 vs. NCBI nr
Match: XP_038874970.1 (uncharacterized protein LOC120067490 [Benincasa hispida])

HSP 1 Score: 203.4 bits (516), Expect = 1.8e-48
Identity = 111/237 (46.84%), Postives = 143/237 (60.34%), Query Frame = 0

Query: 4   DDVLWTTTSEVNVVFTFLVYDHLKDKYLTVQ----------------------------- 63
           +D + ++  E+ V+  FLVYD+LKD+Y T+Q                             
Sbjct: 99  EDEISSSGLEIKVMIKFLVYDNLKDRYWTIQDGKVRCFHAIKKEWGFEKLVSLDTFNDTS 158

Query: 64  ----------------------GNGEVISLIKQPKNDKYTWKFTNFSQKYLNRYESDPFT 123
                                 GN E++SLIKQ KN KYTWK  NFSQ   N YESDPFT
Sbjct: 159 NGLLVDDCCAFGVDVIVMKSYDGNNEILSLIKQLKNYKYTWKINNFSQLSKNVYESDPFT 218

Query: 124 VENYRWKIRLYPTGDTQAKTGYLSLYLMFDSYKELPQGFQVYVEWEMSVLSQFGVGHINC 183
           V+NY WKI LYP GD+ A TGY+S++L FDS+++LPQG +VYVE++++VLSQ G  + N 
Sbjct: 219 VDNYTWKIELYPRGDSLAMTGYMSMFLRFDSFEKLPQGSRVYVEYDIAVLSQLGGAYTNY 278

Query: 184 TDKHWFDDKTSSSG-SHFMSLSDLKESTHGFLRDDTLIVEVKINVISTIKKIYKKGN 189
             KHWFD +T S G  +FMSLS++KE   GFL DDTL+VEVKINVIS +K  Y+KGN
Sbjct: 279 PVKHWFDGETKSWGFGNFMSLSNVKEPMKGFLCDDTLMVEVKINVISILKSFYRKGN 335

BLAST of Lag0001711 vs. NCBI nr
Match: XP_038875772.1 (uncharacterized protein LOC120068142 [Benincasa hispida])

HSP 1 Score: 186.8 bits (473), Expect = 1.8e-43
Identity = 111/231 (48.05%), Postives = 135/231 (58.44%), Query Frame = 0

Query: 9   TTTSEVNVVFTFLVYDHLKDKYLTVQ---------------------------------- 68
           +TTSEVNVVFTFLVYD L+ KYLTVQ                                  
Sbjct: 102 STTSEVNVVFTFLVYDTLRGKYLTVQDGKMRRFSAMKTEWGIEKLLPLDTFNDASNGFLV 161

Query: 69  -----------------GNGEVISLIKQPKNDKYTWKFTNFSQKYLNRYESDPFTVENYR 128
                            G GEV SLIKQPKN +YTWK  NFSQ      ES+PFTVE+YR
Sbjct: 162 DDCCVFGVDIFVMSCDGGMGEVFSLIKQPKNYEYTWKLNNFSQLGSTLKESNPFTVESYR 221

Query: 129 WKIRLYPTGDTQAKTGYLSLYLMFDSYKELPQGFQVYVEWEMSVLSQFGVGHINCTDKHW 184
           WKI LYP+G ++AK+G+LS+YL+FDS  +LPQG QVYVE+EM++LSQ     +  T   W
Sbjct: 222 WKILLYPSGCSKAKSGFLSMYLLFDSSNQLPQGSQVYVEYEMAILSQLEAVPVKETYNCW 281

BLAST of Lag0001711 vs. NCBI nr
Match: XP_031742213.1 (MATH domain and coiled-coil domain-containing protein At3g58340 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 1.6e-41
Identity = 112/240 (46.67%), Postives = 136/240 (56.67%), Query Frame = 0

Query: 1   MIEDDVLWTTTSEVNVVFTFLVYDHLKDKYLTVQ-------------------------- 60
           M+ D++L +TTSEVN VFTFLVYD L+ KYLTVQ                          
Sbjct: 1   MVGDNIL-STTSEVNAVFTFLVYDTLRGKYLTVQDGKMRRFSATKTEWGIEKLLPLNTFK 60

Query: 61  -------------------------GNGEVISLIKQPKNDKYTWKFTNFSQKYLNRYESD 120
                                    G GEV SLI+QP N KYTWK  NFS+   +  E +
Sbjct: 61  DASNGFLVDDCCVFGVDIFVMNSDVGKGEVFSLIEQPNNYKYTWKLNNFSKLDSSLRECN 120

Query: 121 PFTVENYRWKIRLYPTGDTQAKTGYLSLYLMFDSYKELPQGFQVYVEWEMSVLSQF-GVG 180
           PFTVEN  WKIRL+P+GD QAK G+ S+YLM  + KE PQG QVYVE+EM+VLSQ   V 
Sbjct: 121 PFTVENCCWKIRLFPSGDLQAKPGFFSMYLMLTNLKEFPQGAQVYVEYEMAVLSQLEDVP 180

Query: 181 HINCTDKHWF-----DDKTSSSGSHFMSLSDLKESTHGFLRDDTLIVEVKINVISTIKKI 184
            I  T   WF     +       S+F+SLSDLKE   G+L +DTL++EVKINVIST+KKI
Sbjct: 181 PIKETYICWFGFGGIEADKGCGASNFLSLSDLKEPARGYLLNDTLVIEVKINVISTLKKI 239

BLAST of Lag0001711 vs. NCBI nr
Match: KAE8648447.1 (hypothetical protein Csa_008888 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 1.6e-41
Identity = 112/240 (46.67%), Postives = 136/240 (56.67%), Query Frame = 0

Query: 1   MIEDDVLWTTTSEVNVVFTFLVYDHLKDKYLTVQ-------------------------- 60
           M+ D++L +TTSEVN VFTFLVYD L+ KYLTVQ                          
Sbjct: 98  MVGDNIL-STTSEVNAVFTFLVYDTLRGKYLTVQDGKMRRFSATKTEWGIEKLLPLNTFK 157

Query: 61  -------------------------GNGEVISLIKQPKNDKYTWKFTNFSQKYLNRYESD 120
                                    G GEV SLI+QP N KYTWK  NFS+   +  E +
Sbjct: 158 DASNGFLVDDCCVFGVDIFVMNSDVGKGEVFSLIEQPNNYKYTWKLNNFSKLDSSLRECN 217

Query: 121 PFTVENYRWKIRLYPTGDTQAKTGYLSLYLMFDSYKELPQGFQVYVEWEMSVLSQF-GVG 180
           PFTVEN  WKIRL+P+GD QAK G+ S+YLM  + KE PQG QVYVE+EM+VLSQ   V 
Sbjct: 218 PFTVENCCWKIRLFPSGDLQAKPGFFSMYLMLTNLKEFPQGAQVYVEYEMAVLSQLEDVP 277

Query: 181 HINCTDKHWF-----DDKTSSSGSHFMSLSDLKESTHGFLRDDTLIVEVKINVISTIKKI 184
            I  T   WF     +       S+F+SLSDLKE   G+L +DTL++EVKINVIST+KKI
Sbjct: 278 PIKETYICWFGFGGIEADKGCGASNFLSLSDLKEPARGYLLNDTLVIEVKINVISTLKKI 336

BLAST of Lag0001711 vs. NCBI nr
Match: XP_008465935.1 (PREDICTED: uncharacterized protein LOC103503506 [Cucumis melo])

HSP 1 Score: 169.5 bits (428), Expect = 2.9e-38
Identity = 110/242 (45.45%), Postives = 136/242 (56.20%), Query Frame = 0

Query: 2   IEDDVLWTTTSEVNVVFTFLVYDHLKDKYLTVQG-------------------------- 61
           +E+++L +TTSEVNVVFTFLVYD L+ KYLTVQ                           
Sbjct: 103 VENNIL-STTSEVNVVFTFLVYDTLRGKYLTVQDEKMRQFSATKREWGIEKLLPLNTFSD 162

Query: 62  -------------------------NGEVISLIKQPKNDKYTWKFTNFSQKY-LNRYESD 121
                                     GEV SLIKQP N KYTWK  NFS+    + +E +
Sbjct: 163 ASNGFLVDDCCVFGVDIFVMNCNVEKGEVFSLIKQPNNYKYTWKLDNFSKLLDCSFWECN 222

Query: 122 PFTVENYRWKIRLYPTGDTQAKTGYLSLYLMFDSYKELPQGFQVYVEWEMSVLSQF-GVG 181
            F VEN  WKIRL+P+GD QAK G+ S+YLM  +    P+G QVYVE+EM+VLSQ   V 
Sbjct: 223 SFRVENCWWKIRLFPSGDWQAKPGFFSMYLMLSNLIAHPKGAQVYVEYEMAVLSQLEAVP 282

Query: 182 HINCTDKHWF-----DDKTSSSGSHFMSLSDLKESTHGFLRDDTLIVEVKINVISTIKKI 186
            +  T   WF     +       S+FMSLSDLKE T G+L +DTL+VEVKINVISTIKK+
Sbjct: 283 PVKETYTCWFKSGCIEIYKGCGASNFMSLSDLKERTKGYLVNDTLVVEVKINVISTIKKL 342

BLAST of Lag0001711 vs. ExPASy Swiss-Prot
Match: Q9FPT1 (Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 2.6e-13
Identity = 42/135 (31.11%), Postives = 77/135 (57.04%), Query Frame = 0

Query: 44  KQPKNDKYTWKFTNFSQKYLNRYESDPFTVENYRWKIRLYPTGDTQAKTGYLSLYLMFDS 103
           + P   K+TW   NFS++   ++ SD F V  Y+W+I ++P G+      +LS+YL    
Sbjct: 50  EDPPTLKFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGN---NVDHLSMYLDVSD 109

Query: 104 YKELPQGFQVYVEWEMSVLSQFGVGH-INCTDKHWFDDKTSSSG-SHFMSLSDLKESTHG 163
              LP G+  Y ++ ++V++Q    + +    +H F+ + S  G + FM LS+L + + G
Sbjct: 110 AASLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRG 169

Query: 164 FLRDDTLIVEVKINV 177
           +L +DT++VE ++ V
Sbjct: 170 YLVNDTVLVEAEVAV 181

BLAST of Lag0001711 vs. ExPASy Swiss-Prot
Match: Q84WU2 (Ubiquitin C-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP13 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.3e-12
Identity = 42/135 (31.11%), Postives = 76/135 (56.30%), Query Frame = 0

Query: 44  KQPKNDKYTWKFTNFSQKYLNRYESDPFTVENYRWKIRLYPTGDTQAKTGYLSLYLMFDS 103
           + P + K+TW    F++    ++ SD F V  Y+W+I ++P G+      +LS+YL    
Sbjct: 49  EDPPSLKFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGN---NVDHLSMYLDVAD 108

Query: 104 YKELPQGFQVYVEWEMSVLSQFGVGH-INCTDKHWFDDKTSSSG-SHFMSLSDLKESTHG 163
              LP G+  Y ++ ++V++Q    + I    +H F+ + S  G + FM LS+L E T G
Sbjct: 109 AANLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRG 168

Query: 164 FLRDDTLIVEVKINV 177
           +L +DT+++E ++ V
Sbjct: 169 YLVNDTVLIEAEVAV 180

BLAST of Lag0001711 vs. ExPASy Swiss-Prot
Match: Q9M2H9 (MATH domain and coiled-coil domain-containing protein At3g58370 OS=Arabidopsis thaliana OX=3702 GN=At3g58370 PE=4 SV=3)

HSP 1 Score: 65.5 bits (158), Expect = 7.7e-10
Identity = 41/145 (28.28%), Postives = 75/145 (51.72%), Query Frame = 0

Query: 48  NDKYTWKFTNFSQKYLNRYESDPFTVENYRWKIRLYPTGDTQAKTGYLSLYLMFDSYKEL 107
           ++K+TW   NFS    ++  SDPF +   +W +  YP G+    +  LSLYL+ D  + L
Sbjct: 7   DNKFTWVIKNFSTLQYDKIYSDPFVIGGCKWHLLAYPKGNKFNNS--LSLYLVVDDARAL 66

Query: 108 PQGFQVYVEWEMSVLSQFGVGHINCTDK--------HWFDDKTSSSG-SHFMSLSDLKES 167
           P G++ Y ++ +++++Q        TDK        +WF+ +   SG +  + L +L   
Sbjct: 67  PCGWRRYAQFSLTIINQL-------TDKLSQRGEKQNWFNQRNLGSGFTSMIPLPNLHAK 126

Query: 168 THGFLRDDTLIVEVKINVISTIKKI 184
             G+L +  + + V+IN +  I K+
Sbjct: 127 NAGYLVNGEVKIVVEINDLEVIGKL 142

BLAST of Lag0001711 vs. ExPASy Swiss-Prot
Match: Q9M2J1 (MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis thaliana OX=3702 GN=At3g58250 PE=4 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 1.0e-09
Identity = 43/143 (30.07%), Postives = 72/143 (50.35%), Query Frame = 0

Query: 45  QPKNDKYTWKFTNFSQKYLNRYESDPFTVENYRWKIRLYPTGDTQAKTGYLSLYLMFDSY 104
           Q    K++W   NFS     +  SD F ++  RW++  +P G+   K+ +LSLYL     
Sbjct: 5   QADKKKFSWVIKNFSSLQSEKIYSDQFVIDGCRWRLLAFPKGN-DTKSDHLSLYLDVAES 64

Query: 105 KELPQGFQVYVEWEMSVLSQFGVGHI--NCTDK----HWFDDKTSSSG-SHFMSLSDLKE 164
           + LP G++ + ++  ++     V HI   C+ +    HWF +K S  G ++ + L +LK 
Sbjct: 65  ESLPCGWRRHAQFSFTI-----VNHIPEKCSQRKETIHWFCEKVSDWGFTNLVPLIELKA 124

Query: 165 STHGFLRDDTLIVEVKINVISTI 181
              GFL    L + V+I V+  I
Sbjct: 125 EDSGFLVKGELKIVVEIEVLEVI 141

BLAST of Lag0001711 vs. ExPASy Swiss-Prot
Match: Q9SHT2 (MATH domain and coiled-coil domain-containing protein At2g05420 OS=Arabidopsis thaliana OX=3702 GN=At2g05420 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.9e-09
Identity = 40/146 (27.40%), Postives = 71/146 (48.63%), Query Frame = 0

Query: 44  KQPKNDKYTWKFTNFSQKYLNRYESDPFTVENYRWKIRLYPTGDTQA-----KTGYLSLY 103
           KQ  +   TW   NFS        SD F V + +W+++ YP G+ +A     +   L+LY
Sbjct: 3   KQVDSKTITWVIENFSSLQSASIHSDQFVVGDCKWRLKAYPKGNEKATYLAYRANNLALY 62

Query: 104 LMFDSYKELPQGFQVYVEWEMSVLSQFGVGHINCTD-KHWFDDKTSSSGSHFMSLSDLKE 163
           L   + K  P G+  + ++ +++++Q        T+ +HWFD K++S G   M       
Sbjct: 63  LNVANSKSFPIGWTRHTKFSLTLVNQKSEKLSKLTESQHWFDHKSTSRGFPAMIPLTNLH 122

Query: 164 STHGFLRDDTLIVEVKINVISTIKKI 184
           +  GFL +  L +  K+ V+  + K+
Sbjct: 123 TNEGFLVNGELTLVAKVEVLEVVGKL 148

BLAST of Lag0001711 vs. ExPASy TrEMBL
Match: A0A1S3CQ20 (uncharacterized protein LOC103503506 OS=Cucumis melo OX=3656 GN=LOC103503506 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.4e-38
Identity = 110/242 (45.45%), Postives = 136/242 (56.20%), Query Frame = 0

Query: 2   IEDDVLWTTTSEVNVVFTFLVYDHLKDKYLTVQG-------------------------- 61
           +E+++L +TTSEVNVVFTFLVYD L+ KYLTVQ                           
Sbjct: 103 VENNIL-STTSEVNVVFTFLVYDTLRGKYLTVQDEKMRQFSATKREWGIEKLLPLNTFSD 162

Query: 62  -------------------------NGEVISLIKQPKNDKYTWKFTNFSQKY-LNRYESD 121
                                     GEV SLIKQP N KYTWK  NFS+    + +E +
Sbjct: 163 ASNGFLVDDCCVFGVDIFVMNCNVEKGEVFSLIKQPNNYKYTWKLDNFSKLLDCSFWECN 222

Query: 122 PFTVENYRWKIRLYPTGDTQAKTGYLSLYLMFDSYKELPQGFQVYVEWEMSVLSQF-GVG 181
            F VEN  WKIRL+P+GD QAK G+ S+YLM  +    P+G QVYVE+EM+VLSQ   V 
Sbjct: 223 SFRVENCWWKIRLFPSGDWQAKPGFFSMYLMLSNLIAHPKGAQVYVEYEMAVLSQLEAVP 282

Query: 182 HINCTDKHWF-----DDKTSSSGSHFMSLSDLKESTHGFLRDDTLIVEVKINVISTIKKI 186
            +  T   WF     +       S+FMSLSDLKE T G+L +DTL+VEVKINVISTIKK+
Sbjct: 283 PVKETYTCWFKSGCIEIYKGCGASNFMSLSDLKERTKGYLVNDTLVVEVKINVISTIKKL 342

BLAST of Lag0001711 vs. ExPASy TrEMBL
Match: A0A6J1CX47 (probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX=3673 GN=LOC111015608 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 5.3e-38
Identity = 86/149 (57.72%), Postives = 107/149 (71.81%), Query Frame = 0

Query: 35  GNGEVISLIKQPKNDKYTWKFTNFSQKYLNRYESDPFTVENYRWKIRLYPTGDTQAKTGY 94
           G GEV+S IK+PK+ KYTWK  NFSQ     YESDPFTVE YRWK+ LYP G ++AKTG+
Sbjct: 138 GKGEVVSFIKEPKSHKYTWKTKNFSQLDKKFYESDPFTVEGYRWKLWLYPKGSSKAKTGF 197

Query: 95  LSLYLMFDSYKELPQGFQVYVEWEMSVLSQFGVGHINCTDKHWFDDKTSSSGSHFMSLSD 154
           LSLYL ++SY+E+PQG QVYVE+E S    FG G +  + + W          +F+SL D
Sbjct: 198 LSLYLSYNSYEEIPQGSQVYVEYEDSHNCWFGFGGVE-SGRGW-------GHPNFLSLRD 257

Query: 155 LKESTHGFLRDDTLIVEVKINVISTIKKI 184
           L E T GF+ DDT+IVEVKINV+ST+KKI
Sbjct: 258 LNEPTEGFIVDDTIIVEVKINVVSTLKKI 278

BLAST of Lag0001711 vs. ExPASy TrEMBL
Match: A0A6J1CYF6 (uncharacterized protein LOC111015611 OS=Momordica charantia OX=3673 GN=LOC111015611 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.7e-31
Identity = 89/201 (44.28%), Postives = 122/201 (60.70%), Query Frame = 0

Query: 4   DDVLWTTTSEVNVVFTFLVYDHLKDKYLTV--------------QGNGEVISLIKQPKND 63
           +D + + TSEVNVV TFLVYD+L+D YL V               G G+++SL      +
Sbjct: 386 EDEIVSATSEVNVVLTFLVYDNLRDNYLAVLDGKVRRFHAMKTEWGFGKLVSL------E 445

Query: 64  KYTWKFTNFSQKYLNRYESDPFT--VENYRWKIRLYPTGDTQAKTGYLSLYLMFDSYKE- 123
            +      F       +  D F   +E+YRWKIRL+P G +Q   G+LSLYL+FDS+KE 
Sbjct: 446 TFNDSSNGFLVDDCCAFGVDIFVMKLESYRWKIRLHPKGCSQESAGFLSLYLIFDSFKEL 505

Query: 124 LPQGFQVYVEWEMSVLSQFGVGHINCTDKHWFD---DKTSSSGSHFMSLSDLKESTHGFL 183
           LPQG +VY E+E++VLS++GVGH     K WF+    +T      FM L DLKE   G++
Sbjct: 506 LPQGCRVYAEFEIAVLSKYGVGHKKLESKCWFEFGGIETGLGFPEFMPLRDLKEVKKGYI 565

Query: 184 RDDTLIVEVKINVISTIKKIY 185
            DDTLIV+VKINV+S +KK++
Sbjct: 566 CDDTLIVKVKINVVSILKKLF 580

BLAST of Lag0001711 vs. ExPASy TrEMBL
Match: A0A6J1CXZ0 (ubiquitin carboxyl-terminal hydrolase 12-like OS=Momordica charantia OX=3673 GN=LOC111015607 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.8e-30
Identity = 93/205 (45.37%), Postives = 119/205 (58.05%), Query Frame = 0

Query: 3   EDDVLWTTTSEVNVVFTFLVYDHLKDKYLTVQGNGEVISLIKQPKNDKYTWKFTNFSQKY 62
           EDD+    TSEVNVVFTFLVYD LKDKYL VQ       ++++    K  W F       
Sbjct: 96  EDDI---PTSEVNVVFTFLVYDSLKDKYLAVQD-----GIVRRFHAIKTEWGFEKLISLD 155

Query: 63  LNRYESDPFTV---------------ENYRWKIRLYPTGDTQAKTGYLSLYLMFDSYKEL 122
                S+ F V               E YRWK+ LYP G + A+TG+LSLYL+ DS KE+
Sbjct: 156 TFNDSSNGFLVDDCCAFGVDVVVMKLEGYRWKLWLYPKGCSNAETGFLSLYLILDSSKEI 215

Query: 123 PQGFQVYVEWEMSVLSQFGVGHINCTDKHWFDDKTSSSGSHFMSLSDLKESTHGFLRDDT 182
            QG +VYVE+E+++LSQ G      T  +WF    +  G +F+SLS+LK+   G+L +DT
Sbjct: 216 LQGSKVYVEYELALLSQLGAEPEKETYNYWF----AGGGPNFISLSELKKPLKGYLHNDT 275

Query: 183 LIVEVKINVISTIKKI-YKKGNAAA 192
           L VEVKINVIST K     + NAAA
Sbjct: 276 LKVEVKINVISTSKSFNSSRENAAA 288

BLAST of Lag0001711 vs. ExPASy TrEMBL
Match: A0A6J1CZF3 (uncharacterized protein LOC111015606 OS=Momordica charantia OX=3673 GN=LOC111015606 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.6e-29
Identity = 96/203 (47.29%), Postives = 113/203 (55.67%), Query Frame = 0

Query: 4   DDVLWTTTSEVNVVFTFLVYDHLKDKYLTVQGNGEVISLIKQPKNDKYTWKF------TN 63
           DD + +T SEVNVVFTFLVYD+L+DKYL VQ     I     PK +   W F       N
Sbjct: 31  DDAILSTNSEVNVVFTFLVYDYLRDKYLAVQDG--KIRRFHAPKTE---WGFEKLISLDN 90

Query: 64  FSQKYLNRYESD--PFTVENYRWKIR-----------LYPTGDTQAKTGYLSLYLMFDSY 123
           FS         D   F V+    K             LYP G  +A T +LSLYL  DS 
Sbjct: 91  FSNPSNGFLVDDCCAFGVDIIVMKCDGKGERATIGGWLYPKGCPKATTDFLSLYLGLDSL 150

Query: 124 KELPQGFQVYVEWEMSVLSQFGVGHINCT-DKHWFDD----KTSSSGSHFMSLSDLKEST 183
           K+LP+G QVY+EWEMSVLSQFGVGH   T    W       + S     FMSLSDL E T
Sbjct: 151 KDLPKGSQVYIEWEMSVLSQFGVGHNKKTAHNRWLSSGGEYEDSWGVPRFMSLSDLMEPT 210

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038874970.11.8e-4846.84uncharacterized protein LOC120067490 [Benincasa hispida][more]
XP_038875772.11.8e-4348.05uncharacterized protein LOC120068142 [Benincasa hispida][more]
XP_031742213.11.6e-4146.67MATH domain and coiled-coil domain-containing protein At3g58340 [Cucumis sativus... [more]
KAE8648447.11.6e-4146.67hypothetical protein Csa_008888 [Cucumis sativus][more]
XP_008465935.12.9e-3845.45PREDICTED: uncharacterized protein LOC103503506 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Q9FPT12.6e-1331.11Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 ... [more]
Q84WU26.3e-1231.11Ubiquitin C-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP13 PE=1 ... [more]
Q9M2H97.7e-1028.28MATH domain and coiled-coil domain-containing protein At3g58370 OS=Arabidopsis t... [more]
Q9M2J11.0e-0930.07MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis t... [more]
Q9SHT22.9e-0927.40MATH domain and coiled-coil domain-containing protein At2g05420 OS=Arabidopsis t... [more]
Match NameE-valueIdentityDescription
A0A1S3CQ201.4e-3845.45uncharacterized protein LOC103503506 OS=Cucumis melo OX=3656 GN=LOC103503506 PE=... [more]
A0A6J1CX475.3e-3857.72probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX... [more]
A0A6J1CYF61.7e-3144.28uncharacterized protein LOC111015611 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1CXZ01.8e-3045.37ubiquitin carboxyl-terminal hydrolase 12-like OS=Momordica charantia OX=3673 GN=... [more]
A0A6J1CZF31.6e-2947.29uncharacterized protein LOC111015606 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002083MATH/TRAF domainSMARTSM00061math_3coord: 50..155
e-value: 3.0E-9
score: 46.7
IPR002083MATH/TRAF domainPFAMPF00917MATHcoord: 56..176
e-value: 2.6E-14
score: 53.3
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 48..174
score: 25.786106
IPR002083MATH/TRAF domainCDDcd00121MATHcoord: 50..174
e-value: 1.03022E-26
score: 96.6794
IPR008974TRAF-likeGENE3D2.60.210.10Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain Acoord: 38..181
e-value: 3.0E-31
score: 110.3
NoneNo IPR availablePANTHERPTHR46162TRAF-LIKE FAMILY PROTEINcoord: 38..181
NoneNo IPR availablePANTHERPTHR46162:SF40UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 12-LIKEcoord: 38..181
coord: 8..34
NoneNo IPR availablePANTHERPTHR46162TRAF-LIKE FAMILY PROTEINcoord: 8..34
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 48..181

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0001711.1Lag0001711.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
molecular_function GO:0005515 protein binding