Lag0001711 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGAGGATGACGTTCTATGGACTACTACTTCTGAGGTTAATGTTGTGTTTACATTTCTTGTTTACGATCATCTCAAAGACAAATATTTGACCGTCCAAGGTAAACAGACCAGCTCACTCTAAAGTCAAAACATGTTTAGTATGTTAGCTTACATTGAGGCTTTGTTTGTTGTTACTAATTCAGATGGGTAAGACGTTTTCATGTCACTAGGAAAGAGTGGGGTTTTGAAAAGTTGGTTTCACTTGACACTTTCAATGATGTTTCAAATGGGTTGTTGGTTGACGATTGTTGTATATTTGGAGTTGACGTTATTGTTATGAAATGTGAAGGGAATGGGGAGGTCATTTCCTTGATCAAGCAACCAAAAAATGACAAATATACGTGGAAATTCACCAACTTTTCACAAAAATATTTGAATCGGTATGAATCGGATCCTTTTACAGTGGAAAACTACCGTTGGTATGTAAATTGTTTTGATTATATATTCAATTATTTCAGAAACTTGCATATGCAGTACGGTATTATATATTTACATATCCATCATTCAGGAAAATACGCCTATATCCTACAGGAGACACCCAAGCGAAGACTGGCTATTTGTCCTTGTACTTGATGTTTGATAGTTACAAGGAGCTTCCCCAAGGTTTTCAAGTTTACGTTGAATGGGAGATGTCTGTATTGAGCCAATTTGGAGTTGGGCACATAAATTGTACAGGTAATTAACTACTTTTAACTCTAAACTGCAAATTAATATCTCGTTTGATATATAACCTTTTTTTATTTTATTGATACTAAAATCAAAAAATTTATAGGTGGAAGTATGTGTGCATAAGCTTAATTTTCATAAACCAAAAACCAAAAATCAAATAATTATCAAACGGGACCTAAAAGTTTTCCTGGATCAATTTTTGTTTAAAAGAACTTTTAAAAGGGTGATAATGCATTTAACTAAATAAAACCTTTTAAAGATTTTTATTGTGTTTGATACATAGTCAAAAGTGCTACCGAAAATAACACTTTGTTTTAGAGGGAGCGCTAAATCAAAGGCTAATTCTACTTAGGAAACAAATGGTGTTACTTTAGGACATTATTCTCAAGAGTGTTTTTTTAATGTGCAGATAAACATTGGTTTGATGATAAAACAAGCAGCTCGGGTTCACATTTTATGTCATTGAGTGATCTCAAGGAATCAACTCACGGCTTTCTTCGTGATGATACTCTGATCGTTGAAGTGAAAATTAATGTTATTTCTACCATAAAAAAAATTTATAAAAAGGGAAATGCTGCTGCCTATACTAGCTAG ATGATTGAGGATGACGTTCTATGGACTACTACTTCTGAGGTTAATGTTGTGTTTACATTTCTTGTTTACGATCATCTCAAAGACAAATATTTGACCGTCCAAGGGAATGGGGAGGTCATTTCCTTGATCAAGCAACCAAAAAATGACAAATATACGTGGAAATTCACCAACTTTTCACAAAAATATTTGAATCGGTATGAATCGGATCCTTTTACAGTGGAAAACTACCGTTGGAAAATACGCCTATATCCTACAGGAGACACCCAAGCGAAGACTGGCTATTTGTCCTTGTACTTGATGTTTGATAGTTACAAGGAGCTTCCCCAAGGTTTTCAAGTTTACGTTGAATGGGAGATGTCTGTATTGAGCCAATTTGGAGTTGGGCACATAAATTGTACAGATAAACATTGGTTTGATGATAAAACAAGCAGCTCGGGTTCACATTTTATGTCATTGAGTGATCTCAAGGAATCAACTCACGGCTTTCTTCGTGATGATACTCTGATCGTTGAAGTGAAAATTAATGTTATTTCTACCATAAAAAAAATTTATAAAAAGGGAAATGCTGCTGCCTATACTAGCTAG ATGATTGAGGATGACGTTCTATGGACTACTACTTCTGAGGTTAATGTTGTGTTTACATTTCTTGTTTACGATCATCTCAAAGACAAATATTTGACCGTCCAAGGGAATGGGGAGGTCATTTCCTTGATCAAGCAACCAAAAAATGACAAATATACGTGGAAATTCACCAACTTTTCACAAAAATATTTGAATCGGTATGAATCGGATCCTTTTACAGTGGAAAACTACCGTTGGAAAATACGCCTATATCCTACAGGAGACACCCAAGCGAAGACTGGCTATTTGTCCTTGTACTTGATGTTTGATAGTTACAAGGAGCTTCCCCAAGGTTTTCAAGTTTACGTTGAATGGGAGATGTCTGTATTGAGCCAATTTGGAGTTGGGCACATAAATTGTACAGATAAACATTGGTTTGATGATAAAACAAGCAGCTCGGGTTCACATTTTATGTCATTGAGTGATCTCAAGGAATCAACTCACGGCTTTCTTCGTGATGATACTCTGATCGTTGAAGTGAAAATTAATGTTATTTCTACCATAAAAAAAATTTATAAAAAGGGAAATGCTGCTGCCTATACTAGCTAG MIEDDVLWTTTSEVNVVFTFLVYDHLKDKYLTVQGNGEVISLIKQPKNDKYTWKFTNFSQKYLNRYESDPFTVENYRWKIRLYPTGDTQAKTGYLSLYLMFDSYKELPQGFQVYVEWEMSVLSQFGVGHINCTDKHWFDDKTSSSGSHFMSLSDLKESTHGFLRDDTLIVEVKINVISTIKKIYKKGNAAAYTS Homology
BLAST of Lag0001711 vs. NCBI nr
Match: XP_038874970.1 (uncharacterized protein LOC120067490 [Benincasa hispida]) HSP 1 Score: 203.4 bits (516), Expect = 1.8e-48 Identity = 111/237 (46.84%), Postives = 143/237 (60.34%), Query Frame = 0
BLAST of Lag0001711 vs. NCBI nr
Match: XP_038875772.1 (uncharacterized protein LOC120068142 [Benincasa hispida]) HSP 1 Score: 186.8 bits (473), Expect = 1.8e-43 Identity = 111/231 (48.05%), Postives = 135/231 (58.44%), Query Frame = 0
BLAST of Lag0001711 vs. NCBI nr
Match: XP_031742213.1 (MATH domain and coiled-coil domain-containing protein At3g58340 [Cucumis sativus]) HSP 1 Score: 180.3 bits (456), Expect = 1.6e-41 Identity = 112/240 (46.67%), Postives = 136/240 (56.67%), Query Frame = 0
BLAST of Lag0001711 vs. NCBI nr
Match: KAE8648447.1 (hypothetical protein Csa_008888 [Cucumis sativus]) HSP 1 Score: 180.3 bits (456), Expect = 1.6e-41 Identity = 112/240 (46.67%), Postives = 136/240 (56.67%), Query Frame = 0
BLAST of Lag0001711 vs. NCBI nr
Match: XP_008465935.1 (PREDICTED: uncharacterized protein LOC103503506 [Cucumis melo]) HSP 1 Score: 169.5 bits (428), Expect = 2.9e-38 Identity = 110/242 (45.45%), Postives = 136/242 (56.20%), Query Frame = 0
BLAST of Lag0001711 vs. ExPASy Swiss-Prot
Match: Q9FPT1 (Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 2.6e-13 Identity = 42/135 (31.11%), Postives = 77/135 (57.04%), Query Frame = 0
BLAST of Lag0001711 vs. ExPASy Swiss-Prot
Match: Q84WU2 (Ubiquitin C-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP13 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 6.3e-12 Identity = 42/135 (31.11%), Postives = 76/135 (56.30%), Query Frame = 0
BLAST of Lag0001711 vs. ExPASy Swiss-Prot
Match: Q9M2H9 (MATH domain and coiled-coil domain-containing protein At3g58370 OS=Arabidopsis thaliana OX=3702 GN=At3g58370 PE=4 SV=3) HSP 1 Score: 65.5 bits (158), Expect = 7.7e-10 Identity = 41/145 (28.28%), Postives = 75/145 (51.72%), Query Frame = 0
BLAST of Lag0001711 vs. ExPASy Swiss-Prot
Match: Q9M2J1 (MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis thaliana OX=3702 GN=At3g58250 PE=4 SV=2) HSP 1 Score: 65.1 bits (157), Expect = 1.0e-09 Identity = 43/143 (30.07%), Postives = 72/143 (50.35%), Query Frame = 0
BLAST of Lag0001711 vs. ExPASy Swiss-Prot
Match: Q9SHT2 (MATH domain and coiled-coil domain-containing protein At2g05420 OS=Arabidopsis thaliana OX=3702 GN=At2g05420 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.9e-09 Identity = 40/146 (27.40%), Postives = 71/146 (48.63%), Query Frame = 0
BLAST of Lag0001711 vs. ExPASy TrEMBL
Match: A0A1S3CQ20 (uncharacterized protein LOC103503506 OS=Cucumis melo OX=3656 GN=LOC103503506 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 1.4e-38 Identity = 110/242 (45.45%), Postives = 136/242 (56.20%), Query Frame = 0
BLAST of Lag0001711 vs. ExPASy TrEMBL
Match: A0A6J1CX47 (probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX=3673 GN=LOC111015608 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 5.3e-38 Identity = 86/149 (57.72%), Postives = 107/149 (71.81%), Query Frame = 0
BLAST of Lag0001711 vs. ExPASy TrEMBL
Match: A0A6J1CYF6 (uncharacterized protein LOC111015611 OS=Momordica charantia OX=3673 GN=LOC111015611 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 1.7e-31 Identity = 89/201 (44.28%), Postives = 122/201 (60.70%), Query Frame = 0
BLAST of Lag0001711 vs. ExPASy TrEMBL
Match: A0A6J1CXZ0 (ubiquitin carboxyl-terminal hydrolase 12-like OS=Momordica charantia OX=3673 GN=LOC111015607 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 1.8e-30 Identity = 93/205 (45.37%), Postives = 119/205 (58.05%), Query Frame = 0
BLAST of Lag0001711 vs. ExPASy TrEMBL
Match: A0A6J1CZF3 (uncharacterized protein LOC111015606 OS=Momordica charantia OX=3673 GN=LOC111015606 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 1.6e-29 Identity = 96/203 (47.29%), Postives = 113/203 (55.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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