Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACAAAACTGCTATAATTGGCATTAATGTGGACGCTGGGGAACTGAATAGCATTGCTCAAATGATGGGCTGCAAGGTGGAAAATTTACCTTTTCCCTATCTGGGAGTTACAGTGGGGGGCAAGGCAAGGACAATTGACTTTTGGGATCCAGTGGTAGATAACATTAGAAATAAATTGGCCACTTGGAATGGATTTCCTATCTCAAAGGGTGGTAGAACAACCCTTATCAAAGCGGTTTTATGTAGCATTCCAGCATACTTTATGCCTATCTTCAGAATCCCTATTGGGGTGAGTAAGGAAATTGAAAAGGCTTTTAGAAGATTCCTATGGAAGGGTGGAGACGGTGACAAGCGATCTCACCTAGTAAGATGGGATAAGGTGACCACTCCGAGAGACCTTGGGGGCTTGGCATCGATAATATCCGATCAAAAAACTCAGCCCTTTTGTTGAAATGGCTTTGGCGTTTTGAAAATGAGCCTGAATCTTTGTGGAGACAGGTGATAAAGAGTAAGTTTGGGAAGCAATTCATTAGAAATCACTTAGATTTCAAGAAATGGAAGTGTTGTAGCAGCCCTTGGAAGGATATTGCGAAGCTGGCCAGCGTTTTTAAGGTGAACAGAAAGTATAAAATTGGCCGGGAAAATAAGGCTCAGTTTTGGGATGATTGCTGGCTCATTGAAAACCCTCTCAAAATCCAATTTCCTGGAATGTTCAAACTCTCGTTGGCAAAAGATGCTACTGTTCAAAACTTATGGAATGATGTTGCGTGGGATTTGAAGTTGAGAAGGGGGCTTTTTGACAGAGAAATGAATGAATCGATGATTCTGTTCTCGCTCCTAAACAATTGCAGATTAAACAACAGTGATGATGTTTGTTGGTGGAAGCTAGATGGGTCGGGGAAGTTCTCAGTCAAATCTACATTACAGGTCTTTCAAGCTAGGAGCACAGTGTTGGACGACAGCTTATCACCCCAAATTTGGGAAGGAAAAGTCCCAAACAGGGTGAAATTTTTCTTGTGGACGGTGGCTCATAAAAGCATCAACACGATGGACAAGGTGCAAAAGAGATATCCCAGTCTCTCTATCTCCCCAAATATATGTATGCTATGCCATAGAAGTGAGGAGACAGCATCCCACTTATTGCTTCATTGTGATTTTGCAAAGGATGTGTGA
mRNA sequence
ATGCACAAAACTGCTATAATTGGCATTAATGTGGACGCTGGGGAACTGAATAGCATTGCTCAAATGATGGGCTGCAAGGTGGAAAATTTACCTTTTCCCTATCTGGGAGTTACAGTGGGGGGCAAGGCAAGGACAATTGACTTTTGGGATCCAGTGGTAGATAACATTAGAAATAAATTGGCCACTTGGAATGGATTTCCTATCTCAAAGGGTGGTAGAACAACCCTTATCAAAGCGGTTTTATGTAGCATTCCAGCATACTTTATGCCTATCTTCAGAATCCCTATTGGGGTGAGTAAGGAAATTGAAAAGGCTTTTAGAAGATTCCTATGGAAGGGTGGAGACGGTGACAAGCGATCTCACCTAGTAAGATGGGATAAGGTGATAAAGAGTAAGTTTGGGAAGCAATTCATTAGAAATCACTTAGATTTCAAGAAATGGAAGTGTTGTAGCAGCCCTTGGAAGGATATTGCGAAGCTGGCCAGCGTTTTTAAGGTGAACAGAAAGTATAAAATTGGCCGGGAAAATAAGGCTCAGTTTTGGGATGATTGCTGGCTCATTGAAAACCCTCTCAAAATCCAATTTCCTGGAATGTTCAAACTCTCGTTGGCAAAAGATGCTACTGTTCAAAACTTATGGAATGATGTTGCGTGGGATTTGAAGTTGAGAAGGGGGCTTTTTGACAGAGAAATGAATGAATCGATGATTCTGTTCTCGCTCCTAAACAATTGCAGATTAAACAACAGTGATGATGTTTGTTGGTGGAAGCTAGATGGGTCGGGGAAGTTCTCAGTCAAATCTACATTACAGGTCTTTCAAGCTAGGAGCACAGTGTTGGACGACAGCTTATCACCCCAAATTTGGGAAGGAAAAGTCCCAAACAGGGTGAAATTTTTCTTGTGGACGGTGGCTCATAAAAGCATCAACACGATGGACAAGGTGCAAAAGAGATATCCCAGTCTCTCTATCTCCCCAAATATATGTATGCTATGCCATAGAAGTGAGGAGACAGCATCCCACTTATTGCTTCATTGTGATTTTGCAAAGGATGTGTGA
Coding sequence (CDS)
ATGCACAAAACTGCTATAATTGGCATTAATGTGGACGCTGGGGAACTGAATAGCATTGCTCAAATGATGGGCTGCAAGGTGGAAAATTTACCTTTTCCCTATCTGGGAGTTACAGTGGGGGGCAAGGCAAGGACAATTGACTTTTGGGATCCAGTGGTAGATAACATTAGAAATAAATTGGCCACTTGGAATGGATTTCCTATCTCAAAGGGTGGTAGAACAACCCTTATCAAAGCGGTTTTATGTAGCATTCCAGCATACTTTATGCCTATCTTCAGAATCCCTATTGGGGTGAGTAAGGAAATTGAAAAGGCTTTTAGAAGATTCCTATGGAAGGGTGGAGACGGTGACAAGCGATCTCACCTAGTAAGATGGGATAAGGTGATAAAGAGTAAGTTTGGGAAGCAATTCATTAGAAATCACTTAGATTTCAAGAAATGGAAGTGTTGTAGCAGCCCTTGGAAGGATATTGCGAAGCTGGCCAGCGTTTTTAAGGTGAACAGAAAGTATAAAATTGGCCGGGAAAATAAGGCTCAGTTTTGGGATGATTGCTGGCTCATTGAAAACCCTCTCAAAATCCAATTTCCTGGAATGTTCAAACTCTCGTTGGCAAAAGATGCTACTGTTCAAAACTTATGGAATGATGTTGCGTGGGATTTGAAGTTGAGAAGGGGGCTTTTTGACAGAGAAATGAATGAATCGATGATTCTGTTCTCGCTCCTAAACAATTGCAGATTAAACAACAGTGATGATGTTTGTTGGTGGAAGCTAGATGGGTCGGGGAAGTTCTCAGTCAAATCTACATTACAGGTCTTTCAAGCTAGGAGCACAGTGTTGGACGACAGCTTATCACCCCAAATTTGGGAAGGAAAAGTCCCAAACAGGGTGAAATTTTTCTTGTGGACGGTGGCTCATAAAAGCATCAACACGATGGACAAGGTGCAAAAGAGATATCCCAGTCTCTCTATCTCCCCAAATATATGTATGCTATGCCATAGAAGTGAGGAGACAGCATCCCACTTATTGCTTCATTGTGATTTTGCAAAGGATGTGTGA
Protein sequence
MHKTAIIGINVDAGELNSIAQMMGCKVENLPFPYLGVTVGGKARTIDFWDPVVDNIRNKLATWNGFPISKGGRTTLIKAVLCSIPAYFMPIFRIPIGVSKEIEKAFRRFLWKGGDGDKRSHLVRWDKVIKSKFGKQFIRNHLDFKKWKCCSSPWKDIAKLASVFKVNRKYKIGRENKAQFWDDCWLIENPLKIQFPGMFKLSLAKDATVQNLWNDVAWDLKLRRGLFDREMNESMILFSLLNNCRLNNSDDVCWWKLDGSGKFSVKSTLQVFQARSTVLDDSLSPQIWEGKVPNRVKFFLWTVAHKSINTMDKVQKRYPSLSISPNICMLCHRSEETASHLLLHCDFAKDV
Homology
BLAST of Lag0001704 vs. NCBI nr
Match:
RVW53692.1 (putative ribonuclease H protein [Vitis vinifera])
HSP 1 Score: 256.1 bits (653), Expect = 4.3e-64
Identity = 131/350 (37.43%), Postives = 200/350 (57.14%), Query Frame = 0
Query: 1 MHKTAIIGINVDAGELNSIAQMMGCKVENLPFPYLGVTVGGKARTIDFWDPVVDNIRNKL 60
++K++I GIN+D L+ +A+M+ CK P YLG+ +GG + FWDPVV+ I ++L
Sbjct: 461 LNKSSIYGINLDQAHLSRLAEMLDCKASGWPILYLGLPLGGNPKVCGFWDPVVERISSRL 520
Query: 61 ATWNGFPISKGGRTTLIKAVLCSIPAYFMPIFRIPIGVSKEIEKAFRRFLWKGGDGDKRS 120
W +S GGR TLI++ L +P+YF+ +F++P V+ +IE+ R FLW G KR
Sbjct: 521 DGWQKAYLSFGGRITLIQSCLTHLPSYFLSLFKMPATVAAKIERLQRDFLWSGVGEGKRD 580
Query: 121 HLVRWDKVIKSK-FGKQFIRNHLDFKKWKCCSSPWKDIAKLASVFKVNRKYKIGRENKAQ 180
HLVRWD V K K G ++ +C PWK IA++ F + +Y +G ++ +
Sbjct: 581 HLVRWDIVCKPKTIGVRW--------SHRC---PWKAIAQVFQEFSLITRYVVGNGDRIR 640
Query: 181 FWDDCWLIENPLKIQFPGMFKLSLAKDATVQNLW---NDVAWDLKLRRGLFDREMNESMI 240
FW+D W + PL Q+P +F++ + K+ ++ ++ W+L RR L D E+ +
Sbjct: 641 FWEDLWRGDQPLGTQYPRLFRVVVDKNISISSVLGPSRPFLWNLNFRRNLSDSEIEDLEG 700
Query: 241 LFSLLNNCRLNNS-DDVCWWKLDGSGKFSVKSTLQVFQARSTVLDDSLSPQIWEGKVPNR 300
L L++ L+ S D W L SG FSVKS S + S +W +VP +
Sbjct: 701 LMRSLDDLYLSPSVPDARLWPLSSSGLFSVKSFFLALSQSSGSSQNFPSKFVWNSQVPFK 760
Query: 301 VKFFLWTVAHKSINTMDKVQKRYPSLSISPNICMLCHRSEETASHLLLHC 346
VK F+W VAHK +NT D +Q R P ++SP+IC+LC + E+A HL LHC
Sbjct: 761 VKSFVWLVAHKKVNTNDMLQVRRPYKALSPDICILCMKHGESADHLFLHC 799
BLAST of Lag0001704 vs. NCBI nr
Match:
VVA39726.1 (Hypothetical predicted protein, partial [Prunus dulcis])
HSP 1 Score: 254.2 bits (648), Expect = 1.6e-63
Identity = 145/391 (37.08%), Postives = 202/391 (51.66%), Query Frame = 0
Query: 3 KTAIIGINVDAGELNSIAQMMGCKVENLPFPYLGVTVGGKARTIDFWDPVVDNIRNKLAT 62
K +++GIN+D G +N +A GC+V P YLG+ +GG R I FWDPVV+ + N+L
Sbjct: 535 KCSLVGINLDDGLVNELAGAWGCEVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQK 594
Query: 63 WNGFPISKGGRTTLIKAVLCSIPAYFMPIFRIPIGVSKEIEKAFRRFLWKGGDGDKRSHL 122
W +SKGGR T+I+AVLCSIP Y+M +FRIPIGV+ IEK R FLW+G DG KR+H
Sbjct: 595 WKRACLSKGGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEGLDG-KRNHA 654
Query: 123 VRWDKVIKSKF------GKQFIRNHLDFKKW----------------------------- 182
V W+ V K+KF G R+ + KW
Sbjct: 655 VSWEVVGKAKFCGGLGVGSLRARSAVLRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDA 714
Query: 183 -----KCCSSPWKDIAKLASVFKVNRKYKIGRENKAQFWDDCWLIENPLKIQFPGMFKLS 242
C SPW+DI+ ++F + +G + +FW+D W LK FP +F LS
Sbjct: 715 KPATRGSCRSPWRDISSGYNLFLRGCVFVVGCGVRVRFWEDDWSQGGVLKEVFPRLFNLS 774
Query: 243 LAKDATVQNLWND----VAWDLKLRRGLFDREMNESMILFSLLNNCRLNNSD-DVCWWKL 302
++ + + + ++WD RR L + E+ E L LL RL S D WKL
Sbjct: 775 RKQNHNISSFTSSDGLPLSWDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKL 834
Query: 303 DGSGKFSVKSTLQVFQARSTVLDDSLSPQIWEGKVPNRVKFFLWTVAHKSINTMDKVQKR 349
D SG F+ S Q QIW+ K P +VK F+W +NT D +Q+R
Sbjct: 835 DPSGLFTCHSLCSHIQNCGEGEIFPPYTQIWKAKTPLKVKIFVWQAVLGKLNTGDTLQRR 894
BLAST of Lag0001704 vs. NCBI nr
Match:
RVW87607.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])
HSP 1 Score: 254.2 bits (648), Expect = 1.6e-63
Identity = 130/359 (36.21%), Postives = 201/359 (55.99%), Query Frame = 0
Query: 1 MHKTAIIGINVDAGELNSIAQMMGCKVENLPFPYLGVTVGGKARTIDFWDPVVDNIRNKL 60
++K++I GIN+D L+ +A+M+ CK P YLG+ +GG + FWDPVV+ I ++L
Sbjct: 1318 LNKSSIYGINLDQAHLSRLAEMLDCKASGWPILYLGLPLGGNPKACGFWDPVVERISSRL 1377
Query: 61 ATWNGFPISKGGRTTLIKAVLCSIPAYFMPIFRIPIGVSKEIEKAFRRFLWKGGDGDKRS 120
W +S GGR TLI++ L +P+YF+ +F++P V+ +IE+ R FLW G KR
Sbjct: 1378 DGWQKAYLSFGGRITLIQSCLTHLPSYFLSLFKMPATVAAKIERLQRDFLWSGVGEGKRD 1437
Query: 121 HLVRWDKVIKSKFGKQFIRNHLDFKK----WKCCS------SPWKDIAKLASVFKVNRKY 180
HLVRWD V + K ++ ++ KC PWK IA++ F + +Y
Sbjct: 1438 HLVRWDIVCRPKTIGGLGLGNISWRNLALLGKCYGVRWSHRCPWKAIAQVFQEFSLITRY 1497
Query: 181 KIGRENKAQFWDDCWLIENPLKIQFPGMFKLSLAKDATVQNLWN---DVAWDLKLRRGLF 240
+G ++ +FW+D W + PL Q+P +F++ + K+ ++ ++ W+L RR L
Sbjct: 1498 VVGNGDRIRFWEDLWRGDQPLGTQYPRLFRVVVDKNISISSVLGPSLPFLWNLNFRRNLS 1557
Query: 241 DREMNESMILFSLLNNCRLNNS-DDVCWWKLDGSGKFSVKSTLQVFQARSTVLDDSLSPQ 300
D E+ + L L++ L+ S D W L SG FSVKS S + S
Sbjct: 1558 DSEIEDLEGLMRSLDDLYLSPSVPDARLWPLSSSGLFSVKSFFLALSQSSGSSQNFPSKF 1617
Query: 301 IWEGKVPNRVKFFLWTVAHKSINTMDKVQKRYPSLSISPNICMLCHRSEETASHLLLHC 346
+W +VP +VK F+W VAHK +NT D +Q R P ++SP+IC+LC + E+A HL LHC
Sbjct: 1618 VWNSQVPFKVKSFVWLVAHKKVNTNDMLQVRRPYKALSPDICILCMKHGESADHLFLHC 1676
BLAST of Lag0001704 vs. NCBI nr
Match:
VVA30963.1 (Hypothetical predicted protein, partial [Prunus dulcis])
HSP 1 Score: 253.1 bits (645), Expect = 3.6e-63
Identity = 134/391 (34.27%), Postives = 204/391 (52.17%), Query Frame = 0
Query: 3 KTAIIGINVDAGELNSIAQMMGCKVENLPFPYLGVTVGGKARTIDFWDPVVDNIRNKLAT 62
K+ I+GIN LN++A GC+V P YLG+ + G R ++FW+PV D + +L
Sbjct: 44 KSCILGINFSIEALNNMAGSWGCEVGCWPMVYLGLPLRGNPRALNFWNPVKDKVEKRLQK 103
Query: 63 WNGFPISKGGRTTLIKAVLCSIPAYFMPIFRIPIGVSKEIEKAFRRFLWKGGDGDKRSHL 122
W +SKGGR TLI+AVL SIP+Y+M +F++P GV+ ++E+ R FLW+G + K+ HL
Sbjct: 104 WKRACLSKGGRLTLIQAVLSSIPSYYMSLFKMPTGVAAKVEQLMRNFLWEGLEEGKKCHL 163
Query: 123 VRWDKVIKSK------FGKQFIRNHLDFKKW----------------------------- 182
VRW++V KSK G RN KW
Sbjct: 164 VRWERVTKSKEEGGLGIGSLRERNEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGWDT 223
Query: 183 -----KCCSSPWKDIAKLASVFKVNRKYKIGRENKAQFWDDCWLIENPLKIQFPGMFKLS 242
C +PW++I+K + F ++ +G K +FW+D WL E LK FP + LS
Sbjct: 224 KQIVKVSCRNPWREISKGYNSFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLS 283
Query: 243 LAKDATVQNLWND----VAWDLKLRRGLFDREMNESMILFSLLNNCRLNNS-DDVCWWKL 302
K+ ++ N+ + WD RR L + E+ E +IL +L N RL S D W++
Sbjct: 284 RRKNQSIARFANNHEMPLNWDFDFRRNLSEAEIAEVVILLDILGNVRLYGSRPDRRSWEI 343
Query: 303 DGSGKFSVKSTLQVFQARSTVLDDSLSPQIWEGKVPNRVKFFLWTVAHKSINTMDKVQKR 349
+ G FS KS + + + S IW+ K P +++FF+W A+ INT D +Q+R
Sbjct: 344 EEQGSFSCKSFRSFLLSTTRDVFPPFS-SIWKAKTPPKIQFFVWLAANGRINTCDCIQRR 403
BLAST of Lag0001704 vs. NCBI nr
Match:
BBN69274.1 (TatD related DNase [Prunus dulcis])
HSP 1 Score: 253.1 bits (645), Expect = 3.6e-63
Identity = 135/391 (34.53%), Postives = 204/391 (52.17%), Query Frame = 0
Query: 3 KTAIIGINVDAGELNSIAQMMGCKVENLPFPYLGVTVGGKARTIDFWDPVVDNIRNKLAT 62
K+ I+GIN LN++A GC+V P YLG+ +GG R ++FW+PV+D + +L
Sbjct: 478 KSCILGINFSIETLNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWNPVLDKVEKRLQR 537
Query: 63 WNGFPISKGGRTTLIKAVLCSIPAYFMPIFRIPIGVSKEIEKAFRRFLWKGGDGDKRSHL 122
W +SKGGR TLI+AVL SIP+Y+M +F++PIGV+ ++E+ R FLW+G + K HL
Sbjct: 538 WKRACLSKGGRLTLIQAVLSSIPSYYMSLFKMPIGVTAKVEQLMRNFLWEGVEEGKNCHL 597
Query: 123 VRWDKVIKSK------FGKQFIRNHLDFKKW----------------------------- 182
VRW +V KSK G RN KW
Sbjct: 598 VRWVRVTKSKEEGGLGIGSLRERNEALRAKWLWRFPLETNSLWHRIIKSKYGLDSNGWDT 657
Query: 183 -----KCCSSPWKDIAKLASVFKVNRKYKIGRENKAQFWDDCWLIENPLKIQFPGMFKLS 242
C +PW++I+K F ++ +G K +FW+D WL E LK FP ++ LS
Sbjct: 658 KQIDKVSCRNPWREISKGYISFLQCCRFSVGNGEKIRFWEDFWLKEGILKDLFPRLYSLS 717
Query: 243 LAKDATVQNLWND----VAWDLKLRRGLFDREMNESMILFSLLNNCRLNNS-DDVCWWKL 302
K+ + N+ + WD RR L + E+ E ++L +L N RL S D W++
Sbjct: 718 RRKNQCIAWFANNHEMPLNWDFDFRRNLSEAEIAEVVLLLDILGNVRLFGSRPDRRSWEI 777
Query: 303 DGSGKFSVKSTLQVFQARSTVLDDSLSPQIWEGKVPNRVKFFLWTVAHKSINTMDKVQKR 349
+ G FS KS + F +T + IW+ K P +++FF+W A+ INT D +Q+R
Sbjct: 778 EEQGSFSCKS-FRSFLISTTSVVFPPYRSIWKAKTPPKIQFFVWLAANGRINTCDCIQRR 837
BLAST of Lag0001704 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 102.1 bits (253), Expect = 1.4e-20
Identity = 80/343 (23.32%), Postives = 141/343 (41.11%), Query Frame = 0
Query: 47 DFWDPVVDNIRNKLATWNGFPISKGGRTTLIKAVLCSIPAYFMPIFRIPIGVSKEIEKAF 106
D + +++ + ++++ W +S GR TL KAVL S+P + M +P + +++
Sbjct: 11 DTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLS 70
Query: 107 RRFLWKGGDGDKRSHLVRWDKV--------------------IKSKFG------------ 166
R FLW K+ HLV+W KV + SK G
Sbjct: 71 RTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWT 130
Query: 167 ----KQFIRNHLDFKKW----KCCSSPWKDIA-KLASVFKVNRKYKIGRENKAQFWDDCW 226
K++ + +W SS W+ IA L V + G + +FW D W
Sbjct: 131 LVLQKKYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRW 190
Query: 227 LIENPLKIQFPGMFKLSLAKDATVQNLW-NDVAWDLKLRRGLFDREMNESMILFSLLNNC 286
+ PL ++ + + ++LW WD + N + + +
Sbjct: 191 VSGKPL-LELDNGERPTDCDTVVAKDLWIPGRGWDF---AKIDPYTTNNTRLELRAVVLD 250
Query: 287 RLNNSDDVCWWKLDGSGKFSVKSTLQVFQARSTVLDD--SLSPQIWEGKVPNRVKFFLWT 346
+ + D WK G+FSV+S ++ + S +W+ +VP RVK FLW
Sbjct: 251 LVTGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWL 310
BLAST of Lag0001704 vs. ExPASy TrEMBL
Match:
M5WJI4 (zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020784mg PE=4 SV=1)
HSP 1 Score: 259.2 bits (661), Expect = 2.4e-65
Identity = 145/391 (37.08%), Postives = 204/391 (52.17%), Query Frame = 0
Query: 3 KTAIIGINVDAGELNSIAQMMGCKVENLPFPYLGVTVGGKARTIDFWDPVVDNIRNKLAT 62
K +++GIN+D G LN +A GC+V P YLG+ +GG R I FWDPVV+ + N+L
Sbjct: 7 KCSLVGINLDDGLLNELAGAWGCEVGAWPMSYLGLPLGGNPRAIKFWDPVVEKVENRLQK 66
Query: 63 WNGFPISKGGRTTLIKAVLCSIPAYFMPIFRIPIGVSKEIEKAFRRFLWKGGDGDKRSHL 122
W +SKGGR T+I+AVLCSIP Y+M +FRIPIGV+ IEK R FLW+G DG KR+H
Sbjct: 67 WKRACLSKGGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEGLDG-KRNHA 126
Query: 123 VRWDKVIKSKF------GKQFIRNHLDFKKW----------------------------- 182
V W+ V K+KF G R+ KW
Sbjct: 127 VSWEVVGKAKFCGGLGVGSLRARSAALRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDA 186
Query: 183 -----KCCSSPWKDIAKLASVFKVNRKYKIGRENKAQFWDDCWLIENPLKIQFPGMFKLS 242
C SPW+DI+ ++F +++G + +FW+D W LK FP +F LS
Sbjct: 187 KPATRGSCRSPWRDISSGYNLFLQGCVFEVGCGVRVRFWEDDWSRGGVLKEVFPRLFNLS 246
Query: 243 LAKDATVQNLWN----DVAWDLKLRRGLFDREMNESMILFSLLNNCRLNNSD-DVCWWKL 302
++ + + ++WD RR L + E+ E+ L LL R+ +S D WKL
Sbjct: 247 RKQNHNISSFTGLDGFPLSWDFGFRRNLNELEITEAARLLDLLEGVRVFSSRLDKRRWKL 306
Query: 303 DGSGKFSVKSTLQVFQARSTVLDDSLSPQIWEGKVPNRVKFFLWTVAHKSINTMDKVQKR 349
D G F+ S Q R S QIW+ K P +VK F+W +NT D +Q+R
Sbjct: 307 DPFGLFTCHSFCSHIQNRDEGEIFSPYTQIWKAKTPPKVKIFVWQAVLGKLNTGDTLQRR 366
BLAST of Lag0001704 vs. ExPASy TrEMBL
Match:
M5WJ76 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015871mg PE=4 SV=1)
HSP 1 Score: 257.3 bits (656), Expect = 9.3e-65
Identity = 134/379 (35.36%), Postives = 208/379 (54.88%), Query Frame = 0
Query: 3 KTAIIGINVDAGELNSIAQMMGCKVENLPFPYLGVTVGGKARTIDFWDPVVDNIRNKLAT 62
K+ I+GIN LN++A GC+V P YLG+ +GG R ++FW+PV++ + +L
Sbjct: 1014 KSCILGINFSTDVLNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWNPVMEKVEKRLQK 1073
Query: 63 WNGFPISKGGRTTLIKAVLCSIPAYFMPIFRIPIGVSKEIEKAFRRFLWKGGDGDKRSHL 122
W +SKGGR TLI+AVL SIP+Y+M +F++PIGV+ ++E+ R FLW+G D K+ HL
Sbjct: 1074 WKRACLSKGGRLTLIQAVLSSIPSYYMSLFKMPIGVAAKVEQLMRNFLWEGLDEGKKCHL 1133
Query: 123 VRWDKVIKSK----FGKQFIRNHLDF--KKW----------------------KCCSSPW 182
VRW++V KSK G +R ++ KW +PW
Sbjct: 1134 VRWERVTKSKEEGGLGIGSLRERIEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGNPW 1193
Query: 183 KDIAKLASVFKVNRKYKIGRENKAQFWDDCWLIENPLKIQFPGMFKLSLAKDATVQNLWN 242
++I+K + F ++ +G K +FW+D WL E LK FP + LS K+ ++ N
Sbjct: 1194 REISKGYNSFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLSRRKNQSIACFAN 1253
Query: 243 D----VAWDLKLRRGLFDREMNESMILFSLLNNCRLNNS-DDVCWWKLDGSGKFSVKSTL 302
+ + WD RR L + E+ E +IL +L N RL S D W+++ G FS KS
Sbjct: 1254 NHVLPLNWDFDFRRNLSEAEIAEVVILLDILGNVRLYGSRPDRRSWEVEEQGSFSCKSFR 1313
Query: 303 QVFQARSTVLDDSLSPQIWEGKVPNRVKFFLWTVAHKSINTMDKVQKRYPSLSISPNICM 349
+ + + S IW+ K P +++FF+W A+ INT D +Q+R P + +SP+ C+
Sbjct: 1314 SFLLSTTRDVFPPFS-SIWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPKMCLSPSWCV 1373
BLAST of Lag0001704 vs. ExPASy TrEMBL
Match:
M5VS59 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa016504mg PE=4 SV=1)
HSP 1 Score: 257.3 bits (656), Expect = 9.3e-65
Identity = 136/391 (34.78%), Postives = 206/391 (52.69%), Query Frame = 0
Query: 3 KTAIIGINVDAGELNSIAQMMGCKVENLPFPYLGVTVGGKARTIDFWDPVVDNIRNKLAT 62
K+ I+GIN LN++A GC+V P YLG+ +GG R ++FW+PV+D + +L
Sbjct: 709 KSCILGINFSTEALNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWNPVMDKVEKRLQK 768
Query: 63 WNGFPISKGGRTTLIKAVLCSIPAYFMPIFRIPIGVSKEIEKAFRRFLWKGGDGDKRSHL 122
W +SKGGR TLI+AVL SIP+Y+M +F++PIGV+ ++E+ R FLW+G + K HL
Sbjct: 769 WKRACLSKGGRLTLIQAVLSSIPSYYMSLFKMPIGVAAKVEQLMRNFLWEGLEEGKNCHL 828
Query: 123 VRWDKVIKSK------FGKQFIRNHLDFKKW----------------------------- 182
VRW++V KSK G RN KW
Sbjct: 829 VRWERVTKSKEEGGLGIGSLRERNEALRAKWLWRFPLEPNSLWHRIIKSKYGIDSNGWDT 888
Query: 183 -----KCCSSPWKDIAKLASVFKVNRKYKIGRENKAQFWDDCWLIENPLKIQFPGMFKLS 242
C +PW++I+K + F ++ +G K +FW+D WL E LK FP + LS
Sbjct: 889 KQIDKVSCRNPWREISKGYNSFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLS 948
Query: 243 LAKDATVQNLWND----VAWDLKLRRGLFDREMNESMILFSLLNNCRLNNS-DDVCWWKL 302
K+ ++ N+ + WD RR L + E+ E +IL +L N RL S D W++
Sbjct: 949 RRKNQSIACFANNHVMPLNWDFDFRRNLSEAEIAEVVILLDILGNVRLYGSRPDRRSWEV 1008
Query: 303 DGSGKFSVKSTLQVFQARSTVLDDSLSPQIWEGKVPNRVKFFLWTVAHKSINTMDKVQKR 349
+ G FS KS + + + S IW+ K P +++FF+W A+ INT D +Q+R
Sbjct: 1009 EEQGSFSCKSFRSFLLSTTRDVFPPFS-SIWKAKTPPKIQFFVWLAANGRINTCDCIQRR 1068
BLAST of Lag0001704 vs. ExPASy TrEMBL
Match:
M5X4S0 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa021750mg PE=4 SV=1)
HSP 1 Score: 256.9 bits (655), Expect = 1.2e-64
Identity = 136/391 (34.78%), Postives = 207/391 (52.94%), Query Frame = 0
Query: 3 KTAIIGINVDAGELNSIAQMMGCKVENLPFPYLGVTVGGKARTIDFWDPVVDNIRNKLAT 62
K+ I+GIN LN++A GC+V P YLG+ +GG R ++FW+PV++ + +L
Sbjct: 458 KSCILGINFSTEVLNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWNPVMEKVEKRLQK 517
Query: 63 WNGFPISKGGRTTLIKAVLCSIPAYFMPIFRIPIGVSKEIEKAFRRFLWKGGDGDKRSHL 122
W +SKGGR TLI+AVL SIP+Y+M +F++PIGV+ ++E+ R FLW+G + K+ HL
Sbjct: 518 WKRACLSKGGRLTLIQAVLSSIPSYYMSLFKMPIGVAAKVEQLMRNFLWEGLEEGKKCHL 577
Query: 123 VRWDKVIKSK------FGKQFIRNHLDFKKW----------------------------- 182
VRW++V KSK G RN KW
Sbjct: 578 VRWERVTKSKEEGGLGIGSLRERNEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGWDT 637
Query: 183 -----KCCSSPWKDIAKLASVFKVNRKYKIGRENKAQFWDDCWLIENPLKIQFPGMFKLS 242
C +PW++I+K + F ++ +G K +FW+D WL E LK FP + LS
Sbjct: 638 KRIDKVSCRNPWREISKGYNSFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLS 697
Query: 243 LAKDATVQNLWND----VAWDLKLRRGLFDREMNESMILFSLLNNCRLNNS-DDVCWWKL 302
K+ ++ N+ + WD RR L + E+ E +IL +L N RL S D W++
Sbjct: 698 RRKNQSIACFANNHVLPLNWDFDFRRNLSEAEIAEVVILLDILGNVRLYGSRPDRRSWEV 757
Query: 303 DGSGKFSVKSTLQVFQARSTVLDDSLSPQIWEGKVPNRVKFFLWTVAHKSINTMDKVQKR 349
+ G FS KS + + + S IW+ K P +++FF+W A+ INT D +Q+R
Sbjct: 758 EEQGSFSCKSFRSFLLSTTRDVFPPFS-SIWKAKTPPKIQFFVWLAANGRINTCDCIQRR 817
BLAST of Lag0001704 vs. ExPASy TrEMBL
Match:
M5WKV4 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015607mg PE=4 SV=1)
HSP 1 Score: 256.5 bits (654), Expect = 1.6e-64
Identity = 136/391 (34.78%), Postives = 205/391 (52.43%), Query Frame = 0
Query: 3 KTAIIGINVDAGELNSIAQMMGCKVENLPFPYLGVTVGGKARTIDFWDPVVDNIRNKLAT 62
K+ I+GIN LN++A GC+V P YLG+ +GG R ++FW+PV+D + +L
Sbjct: 465 KSCILGINFSTDALNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWNPVMDKVEKRLQK 524
Query: 63 WNGFPISKGGRTTLIKAVLCSIPAYFMPIFRIPIGVSKEIEKAFRRFLWKGGDGDKRSHL 122
W +SKGGR TLI+AVL SIP+Y+M +F++PIGV+ ++E+ R FLW+G + K HL
Sbjct: 525 WKRACLSKGGRLTLIQAVLSSIPSYYMSLFKMPIGVAAKVEQLMRNFLWEGLEDGKNCHL 584
Query: 123 VRWDKVIKSK------FGKQFIRNHLDFKKW----------------------------- 182
VRW++V KSK G RN KW
Sbjct: 585 VRWERVTKSKEEGGLGIGSLRERNEALRAKWLWRFPLEPNSLWHRIIKSKYGIDSNGWDT 644
Query: 183 -----KCCSSPWKDIAKLASVFKVNRKYKIGRENKAQFWDDCWLIENPLKIQFPGMFKLS 242
C +PW++I+K + F ++ +G K +FW+D WL E LK FP + LS
Sbjct: 645 KQIDKVSCRNPWREISKGYNSFLQCCRFSVGNGEKIRFWEDFWLKEGILKDLFPRLSSLS 704
Query: 243 LAKDATVQNLWND----VAWDLKLRRGLFDREMNESMILFSLLNNCRLNNS-DDVCWWKL 302
K+ ++ N+ + WD RR L + E+ E +IL +L N RL S D W++
Sbjct: 705 RRKNQSIACFANNHVMPLNWDFDFRRNLSEAEIAEVVILLDILGNVRLYGSRPDRRSWEV 764
Query: 303 DGSGKFSVKSTLQVFQARSTVLDDSLSPQIWEGKVPNRVKFFLWTVAHKSINTMDKVQKR 349
G FS KS + + + S IW+ K P +++FF+W A+ INT D +Q+R
Sbjct: 765 KEQGSFSCKSFRSFLLSTTRDVFPPFS-SIWKAKTPPKIQFFVWLAANGRINTCDCIQRR 824
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
RVW53692.1 | 4.3e-64 | 37.43 | putative ribonuclease H protein [Vitis vinifera] | [more] |
VVA39726.1 | 1.6e-63 | 37.08 | Hypothetical predicted protein, partial [Prunus dulcis] | [more] |
RVW87607.1 | 1.6e-63 | 36.21 | Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | [more] |
VVA30963.1 | 3.6e-63 | 34.27 | Hypothetical predicted protein, partial [Prunus dulcis] | [more] |
BBN69274.1 | 3.6e-63 | 34.53 | TatD related DNase [Prunus dulcis] | [more] |
Match Name | E-value | Identity | Description | |
P0C2F6 | 1.4e-20 | 23.32 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
Match Name | E-value | Identity | Description | |
M5WJI4 | 2.4e-65 | 37.08 | zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020784mg ... | [more] |
M5WJ76 | 9.3e-65 | 35.36 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... | [more] |
M5VS59 | 9.3e-65 | 34.78 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... | [more] |
M5X4S0 | 1.2e-64 | 34.78 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... | [more] |
M5WKV4 | 1.6e-64 | 34.78 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... | [more] |
Match Name | E-value | Identity | Description | |