Lag0001677 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0001677
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionEthylene receptor
Locationchr4: 34219414 .. 34222711 (+)
RNA-Seq ExpressionLag0001677
SyntenyLag0001677
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCGACGAGAGAAGGGGTTTTCAGGTGATTTTGCATATGGTGGTAGCCTATTAAATGACATCAACAAGGGAGGAGGATATGCTTTGTTTCGGGTTGTAGCCGAGAGTGGAAGTCAGAGAAAGGAATGACCAAAGATGGGGTAACTGGAGACAAAGCTCATATGATGGAGATTCGTGTATCATATTTGAGATTGGGATATACAAGAGTAACTCTCAAACAGAGGGCTCGATGCCAAACATGGTATCTGGTGATCAGAGATATGCTAGTGATGGAGCCGAGGAGTGCTTGAGTTTTACCATCTGCAAGAAGCTCGTTAAGGTCAGTTTTCTATATTACGTTTTAGTATAACCCTTCTACTCAGTCATTTTGTTGAACTTCTTGAAACTATTAAGATTGAAGGTAGAGATCTTGCATTTTCTCCTTCAGCCTTGGGTTTCTTCTGCTACAATAGTCTGTTAAAAAGAAGATAAAAAATAAACTTTCGGAGTCCTTTTTCTTGATTTGGTTTGATTAGCTTTAGCTTTTATCATTTCTTGCTCTGAAGTTTTGACCAATTGAAACTGCTATGATGTGGTGGGGTTATTAGAGTTGTTTATTCGTTTATTGTTGCTTACTGCTTACTACAACTTGTTATACCAAGACCTTCTGACCACACAACATAGAGTCTCAGATATCACAAACCAAGCAACAAACACACCGAGAAAACTGATATTTCAGCAAGCACAGTCCAGCAAGCTTAAACCAGAACACAACAAACAACTCATAAAACCAGAATATGTAAACAGAGGATAGGGAAAGAAGAGAACACAGAAGTTTTATAGTGGTTCGTTCCTTATAAACGGAACTACATCCACTTTAGGCCATTTCACTAGATTATTGACAAGGTTACAAGTTTACCAGAGATACAACTCTTCTTCAAGGATCAATACAGATTTAAGCAAAAAACAATCTCACCTGGATCGAAACAATCTGCATATACAAACTTGAAACAAAACAGAGATGAAGAAGAAGACTCTCACAACAACCCAAGTGCATCAGCTTCTTCCTTCAGCCCTCTCGCAAAAGCAGACTCTCTCGCACTCTCTTGCTCTCTCTCGGAAATAATCCTTCACAGCTTGATTTATCATCCTCTGATAACCGAATGGAGCCCACACTTTCTTCCATTTTAAATCCCCCAAAAAACGCCTTGCCAGAACAACAGAAATTTAGCTTGACAGTAACTAACTCGTACGACCATGTGCTGAAATTCCTCCTTGGGTTTTTATTCACCATCTTCTAATTTCACCAGATGAGGTAAAAGACCCAAGCTCCAGCTGACTCATCAGTACTCAGCTTACTAATCCCTCTAAGGCTGACTGGGATTTAAAAAGTGTACAGGTGGCACCTCACATTTGACTTATATTAGCAAAGAAATCAACACAACTGAACAAATGATAGTTTGGATTTTGGATTTCAATCTATAAACTTAACAATTTTTACTTTCAACTTTTAGCACAAAAGTTCTTTTTTCTTTCTTGAATTTCTGTCTGGTGAAAGATTTGTTTAGTTTCAAGGTCTTTGGCATGGATATCTCATGCTTACCAAACTTTTCCTATTCCATTTAGACGTTTTGTGCAAGCTACTATTTTTAGTCTTTAAAAGTAGCCGTTTTCTTTTACCATCATCCTTTTTCTTTTTTCGTTTATTTTTTCGTTTTGTGCACCTACTTATAATATTCATATTATGAGTTTTAATTGTATTTTATTTTTTTAACTTTTAACGTTACAATTTCAATAGCTTTATTGTAGGACTGACCGAGTTGCATAATCTTTATCTCATGCATATATATGGTTTCATTTAGATCCGCATTTCATTGTCACGTGTTTCTTTTCATTCAAGCAACTGCCGACAATAAATGTAGTGTACTACTTTGGAATAGTCAGAGATGTTATGAATGGCGTCAATTTTCTAACCAAGATTGTCATAGTAAAAAACTAAGTACATATGACTTAAAAGATCGAGCACTTACAATAAAATATTTATAAAATAGTAAAATGCATGGAAATTGTGATAGTCAATTATATGGTTGTGTTGTGGGTGCATTTCAGCTTCATGATCCATAAAGTTTAAGTTTTTTTTTAATCATACTGGTAAATTCTGCGAATGATTTTCAGCTTTATGGTTATATATCTTCCAAGTATTGTAGATTACTCCCGACCTTCATTGCTTTTCACTGCATGTATGGTCATCTCTTTCTTTTTTTTATTTTTTGAAAAAGGTCATCTCTTTCTTTTTATGCTGCATCCAGATTTGGTCCTAAAGACGGGTATAACTATACCAGCCGGAACATTAGTTGTTGTACCCGTAAAATTGGTACAGGTTGATAATTCAAGTTGGGGAGGTGATGCCAATGAGTTCAATCCCTACCGTTTTTTATCAATGGCTTGCAATGGGACTGATACAACTCAGCGAACATCACTTGCAGGTATGGTACTTCATGCTTAAATACTTATCCTAGCATAAATGTGTAATCTACTTAGCAACTCGGTGTCTACTTTTGTTTAGCTCCTTCATTTGATCCTCTTTCGAAGTGTGATACTCAACTCAAGGGCAGCGGAGTGGGATAATTAGTTTTGTGGGAATTGGCTATATTTTGATTTTTGAAAAATACGACTCATGAGTGACAGTGGTCAAGACCTCATTTTTTGGGCCTCCATATGAAGTATGATGAGGATTCAATTATTTCCCATTCTCTCCCTTTTACCCCCACCCTCTATCCCAACAGTAGAGAATGTAATATGAAGTCTTTTGTCTTCATCCTTTTTTTTTGTTTTTAAATTTTATTTTTATTTATTTTATTGTTTTTTTATTGGAATGCATCTTTAGTTTTTACTTTCTTTGAATTTTGGTCTAGAACTTTTCTTGGGATTGGGTTCTTTGTCCATTCGAACACATTATTTTCCTTCCAATCTTGACTGGGAAGAGGGGGGGGGGGCTAGCGGAAGCCCTGCCCACCCTTGTCTCTATGTTTAACCATATAATGTTTTCTCTTAAGAAAGAAGCATACAGAAAAGTGCAATTTGGAATTCTGATGATGTGGTTTTAGCCCAATTTATTGTGATAAAATGATCTAGATTGTGCGTTAATGTGCTATTTCTTTTCATCACACTTGTATTGTCGTGCAGCAGGTGAAAATGCTGGGATCAAGGACAACGTTCATTTGTTTTCAACAATCCAATTGGCAATGTTGGATTTCTTCCCTTTGGCTTTGGTGCACGTGCCTGTGTTGGTCAAAAATTTATCATACACGGAGTAG

mRNA sequence

ATGGGCGACGAGAGAAGGGGTTTTCAGCCGAGAGTGGAAGTCAGAGAAAGGAATGACCAAAGATGGGGTAACTGGAGACAAAGCTCATATGATGGAGATTCGTGTATCATATTTGAGATTGGGATATACAAGAGTAACTCTCAAACAGAGGGCTCGATGCCAAACATGGTATCTGGTGATCAGAGATATGCTAGTGATGGAGCCGAGGAGTGCTTGAGTTTTACCATCTGCAAGAAGCTCGTTAAGGTTGATAATTCAAGTTGGGGAGGTGATGCCAATGAGTTCAATCCCTACCGTTTTTTATCAATGGCTTGCAATGGGACTGATACAACTCAGCGAACATCACTTGCAGCAGGTGAAAATGCTGGGATCAAGGACAACGTTCATTTGTTTTCAACAATCCAATTGGCAATGTTGGATTTCTTCCCTTTGGCTTTGGTGCACGTGCCTGTGTTGGTCAAAAATTTATCATACACGGAGTAG

Coding sequence (CDS)

ATGGGCGACGAGAGAAGGGGTTTTCAGCCGAGAGTGGAAGTCAGAGAAAGGAATGACCAAAGATGGGGTAACTGGAGACAAAGCTCATATGATGGAGATTCGTGTATCATATTTGAGATTGGGATATACAAGAGTAACTCTCAAACAGAGGGCTCGATGCCAAACATGGTATCTGGTGATCAGAGATATGCTAGTGATGGAGCCGAGGAGTGCTTGAGTTTTACCATCTGCAAGAAGCTCGTTAAGGTTGATAATTCAAGTTGGGGAGGTGATGCCAATGAGTTCAATCCCTACCGTTTTTTATCAATGGCTTGCAATGGGACTGATACAACTCAGCGAACATCACTTGCAGCAGGTGAAAATGCTGGGATCAAGGACAACGTTCATTTGTTTTCAACAATCCAATTGGCAATGTTGGATTTCTTCCCTTTGGCTTTGGTGCACGTGCCTGTGTTGGTCAAAAATTTATCATACACGGAGTAG

Protein sequence

MGDERRGFQPRVEVRERNDQRWGNWRQSSYDGDSCIIFEIGIYKSNSQTEGSMPNMVSGDQRYASDGAEECLSFTICKKLVKVDNSSWGGDANEFNPYRFLSMACNGTDTTQRTSLAAGENAGIKDNVHLFSTIQLAMLDFFPLALVHVPVLVKNLSYTE
Homology
[Close]
BLAST of Lag0001677 vs. NCBI nr
Match: NP_001295769.1 (ethylene receptor 2 precursor [Cucumis sativus] >AJR29339.1 ethylene receptor ETR2-2 [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 8.3e-23
Identity = 63/108 (58.33%), Postives = 73/108 (67.59%), Query Frame = 0 

Query: 1   MGDERRGFQPRVEV-------------------------RERNDQRWGNWRQSSYDGDSC 60
           MGDERR FQ  + +                         + RNDQRWGNWRQ+S DGD+ 
Sbjct: 481 MGDERRVFQVLLHMVGSLLNDINQGGGYALFRVVAESGSQGRNDQRWGNWRQNSSDGDAF 540

Query: 61  IIFEIGIYKSNSQTEGSMPNMVSGDQRYASDGAEECLSFTICKKLVKV 84
           I FE+GI KSNSQ+EGS+PNMVSGD+RYASDGAEE LSFTICKKLVK+
Sbjct: 541 IRFEVGINKSNSQSEGSIPNMVSGDRRYASDGAEERLSFTICKKLVKL 588

[Close]
BLAST of Lag0001677 vs. NCBI nr
Match: BAF91863.1 (ethylene receptor [Cucumis melo var. cantalupo] >BAF91864.1 ethylene receptor [Cucumis melo var. cantalupo])

HSP 1 Score: 117.9 bits (294), Expect = 8.3e-23
Identity = 64/108 (59.26%), Postives = 73/108 (67.59%), Query Frame = 0 

Query: 1   MGDERRGFQPRVEV-------------------------RERNDQRWGNWRQSSYDGDSC 60
           MGDERR FQ  + +                         + RNDQRWGNWRQSS DGD+ 
Sbjct: 481 MGDERRVFQVLLHMVGSLLNDINQGGGYALFRVVAESGSQGRNDQRWGNWRQSSSDGDAF 540

Query: 61  IIFEIGIYKSNSQTEGSMPNMVSGDQRYASDGAEECLSFTICKKLVKV 84
           I FEIGI KSNSQ+EGS+PN+VSGD+RYASDGAEE LSFTICKKLVK+
Sbjct: 541 IRFEIGINKSNSQSEGSIPNVVSGDRRYASDGAEERLSFTICKKLVKL 588

[Close]
BLAST of Lag0001677 vs. NCBI nr
Match: BAA85819.1 (ethylene receptor CS-ETR2 [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 8.3e-23
Identity = 63/108 (58.33%), Postives = 73/108 (67.59%), Query Frame = 0 

Query: 1   MGDERRGFQPRVEV-------------------------RERNDQRWGNWRQSSYDGDSC 60
           MGDERR FQ  + +                         + RNDQRWGNWRQ+S DGD+ 
Sbjct: 481 MGDERRVFQVLLHMVGSLLNDINQGGGYALFRVVAESGSQGRNDQRWGNWRQNSSDGDAF 540

Query: 61  IIFEIGIYKSNSQTEGSMPNMVSGDQRYASDGAEECLSFTICKKLVKV 84
           I FE+GI KSNSQ+EGS+PNMVSGD+RYASDGAEE LSFTICKKLVK+
Sbjct: 541 IRFEVGINKSNSQSEGSIPNMVSGDRRYASDGAEERLSFTICKKLVKL 588

[Close]
BLAST of Lag0001677 vs. NCBI nr
Match: XP_004134082.1 (ethylene receptor 2 isoform X1 [Cucumis sativus] >XP_031737452.1 ethylene receptor 2 isoform X1 [Cucumis sativus] >XP_031737453.1 ethylene receptor 2 isoform X1 [Cucumis sativus] >KGN56889.1 hypothetical protein Csa_010306 [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 8.3e-23
Identity = 63/108 (58.33%), Postives = 73/108 (67.59%), Query Frame = 0 

Query: 1   MGDERRGFQPRVEV-------------------------RERNDQRWGNWRQSSYDGDSC 60
           MGDERR FQ  + +                         + RNDQRWGNWRQ+S DGD+ 
Sbjct: 481 MGDERRVFQVLLHMVGSLLNDINQGGGYALFRVVAESGSQGRNDQRWGNWRQNSSDGDAF 540

Query: 61  IIFEIGIYKSNSQTEGSMPNMVSGDQRYASDGAEECLSFTICKKLVKV 84
           I FE+GI KSNSQ+EGS+PNMVSGD+RYASDGAEE LSFTICKKLVK+
Sbjct: 541 IRFEVGINKSNSQSEGSIPNMVSGDRRYASDGAEERLSFTICKKLVKL 588

[Close]
BLAST of Lag0001677 vs. NCBI nr
Match: NP_001284468.1 (ethylene receptor precursor [Cucumis melo] >AHN92213.1 ethylene receptor 2a [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-22
Identity = 63/108 (58.33%), Postives = 73/108 (67.59%), Query Frame = 0 

Query: 1   MGDERRGFQPRVEV-------------------------RERNDQRWGNWRQSSYDGDSC 60
           MGDERR FQ  + +                         + RNDQRWGNWRQSS DGD+ 
Sbjct: 481 MGDERRVFQVLLHMVGSLLNDINQGGGYALFRVVAESGSQGRNDQRWGNWRQSSSDGDAF 540

Query: 61  IIFEIGIYKSNSQTEGSMPNMVSGDQRYASDGAEECLSFTICKKLVKV 84
           I FE+GI KSNSQ+EGS+PN+VSGD+RYASDGAEE LSFTICKKLVK+
Sbjct: 541 IRFEVGINKSNSQSEGSIPNVVSGDRRYASDGAEERLSFTICKKLVKL 588

The following BLAST results are available for this feature:
BLAST of Lag0001677 vs. NCBI nr
Match NameE-valueIdentityDescription
NP_001295769.18.3e-2358.33ethylene receptor 2 precursor [Cucumis sativus] >AJR29339.1 ethylene receptor ET... [more]
BAF91863.18.3e-2359.26ethylene receptor [Cucumis melo var. cantalupo] >BAF91864.1 ethylene receptor [C... [more]
BAA85819.18.3e-2358.33ethylene receptor CS-ETR2 [Cucumis sativus][more]
XP_004134082.18.3e-2358.33ethylene receptor 2 isoform X1 [Cucumis sativus] >XP_031737452.1 ethylene recept... [more]
NP_001284468.11.1e-2258.33ethylene receptor precursor [Cucumis melo] >AHN92213.1 ethylene receptor 2a [Cuc... [more]
BLAST of Lag0001677 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0001677.1Lag0001677.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048856 anatomical structure development
biological_process GO:0010105 negative regulation of ethylene-activated signaling pathway
biological_process GO:0018106 peptidyl-histidine phosphorylation
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0051740 ethylene binding
molecular_function GO:0038199 ethylene receptor activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0000155 phosphorelay sensor kinase activity