Lag0001629 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0001629
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Beta strand repeat-containing protein
Location	chr4: 33793721 .. 33798157 (+)
RNA-Seq Expression	Lag0001629
Synteny	Lag0001629

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATTGCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTTGCCGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACATCGCTTCGTTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCATATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTCGCTGCAGTTTCTTCTCCCTAACTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTTCTTCTCCCTAAGTTCGAAGGTTCTCACGCGCTTCGATGCAGTTCCTTCCTCCCTAAGTTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCACGCGCTGTGATTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTTGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGTGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCCTTCTCCAAATTCGAAGGCGCTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGTTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCCTTTTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTTGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGTAGTTGACGGCGTCCGCTGTGCTTCATCTTCAAATGTTGGCAGTTCACAGCGTCCGCTTCGCTTCATCTTCAAAAATTGACTGTTGATAAGATGAACAACTTTAGTGTTGCCTTTATCTTGAAAGTGTCCAAACTGGAAGATGAATCTTAGCTGCAAGTTAAAAAAATGTTTGATATCAAACCACAAAAAAAAAAAAAAAAGACAATAAAAGTGTTGTTAAAAAAACGGTGACCACCCCTACAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAGTCACTGCAATTGAATCTGATGACGACCGTTGTAGGCGAGTCGGGTCTGGTGACCACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGTGACTACCCCTACAGGTTACTCAGATCACCCAGTAAAATGGGGATTGGTCTAGCAGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGTAGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGGTGCATCACTGAAGGCGAGTCTGATGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGTATCGCTGTAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATGAAATAGGGGACTGGTTTAGCAGGAGAGAGATCACTGCAAGTGAAGCTGGTGACGACCGTTGCACGAAGCTTACACATTCAAGCAAGAAAGAAACAAATTGCAATAATATATGTGCAAAGAAAAAAATGGAAGCCAAAAGCTCTATAGTACAATCAAAGCAATTCATATGAGCGACATCCAATAAGGACATACATGGAATATATATGCACATCAAAAAAAAAAAAAAAAAACGAAAATAAAAAATAATAATAATAAATAAATAAATAAAAACGAAAAATAAAAAAATAAAAAATAAAAAGAGAAGAAATTTCCTACCTGGATCCCTTCTTGAATGCTCTCTGCAATTGATGTGTGTCTCCCCTACTGAGGTTCAGTCTTATTTATAAGGGGAGTTTTAAGTTCAAATCAAAGGTTTAGATAAAGATTTGGATAAAGATTTGACTAAAATGAAATCCTATCTCCGGTTCAAAATTTTATGAGATAATCTTTATCTTTATCTGAACCAACTTAATTAAATTAAAATTCCTAAAAGATTATTTCAATTCAAATCAATTTGGGAATTCAAATTTTATCAAATAATTTTATTTGGGCATACTCCAAATTTTTTCTTCCAAATCAAAATTTGAGATTCAAACATCAAATTCTATGCCAAATGCAAGTTTGAATTTGGTAAAATTTTACCTCAAATAATATTTTGGGCATAATCCAAATTTTATCCCAAATGGACCAAAGTCCAAACCTCAAGTTATGTTCCATATTTTGATTAAATTGGCGCACCAAATGGAGTCAAAGTCAAGAACAAATACCTTGCATTTTAATTCCAAAATATATTTTTCGAGATTCACTCACACATAATTTGTGTCTAAATCTCGGAAAGGGGGCATTTGTTGATGGAGAAATTTTGACCAATCACGAATTGCCACGTCATTACATAAAATTAATGACGAAATTAAAGTTAATTAAATTTGGGACCAATTATAAATTGACATGTGTCCCAAATTTAATTTGAAAACAAAGTTGGCCAATTATAAATTTATAGAGCCAAATTTCTATTTGATCAATTAATTAAAATTAAATTATTTCAATCAAATTAATTAATTTGACCAATTAATTAAAAATAATAATTATTTGGATCAAATTTGGGTCTTTTAAATGTCTGGGTCATATGGTTTTGGGTCAAATATAAACCAAACCCAAGACTAAATGGTTCAGCCCAAGACCAATAAAACCCAAGCCCAAGTTGTTAGGCCCAAAAGTTACCAGGGCCCATCCTGCGAGAACTCTATAAATAGGGGGATTCAGATTTGGAGACAGAGTCAGAGAACTCAGAGTCCAGAGCATTCTGCCAGAGTCCAGAGTCGGCAGGTCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCTGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGTCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAGGAAGATCAACAAGCCAACAAGCCAACAAGCCGATCCAGGAGATCATCACGCCAACAGGCCGATCATTCAAGAAGATCAACAAGCCCAATAGGTCGATCCAGGAGATCATCAACCTAACAGGCCGATCATCCAAGAAGATCAACAAGTCCAATAGGTCGATCCAGGAGATCATCAACCTAACAGACCGATCATCCAAGAAGATCAACAAGCCAATAAGCCGATCCAAGAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAACCTAGCAAGTTGATCATCTAA

mRNA sequence

ATGGAAATTGCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACATCGCTTCGTTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCATATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTCGCTGCAGTTTCTTCTCCCTAACTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTTCTTCTCCCTAAGTTCGAAGGTTCTCACGCGCTTCGATGCAGTTCCTTCCTCCCTAAGTTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCACGCGCTGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGTGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCCTTCTCCAAATTCGAAGGCGCTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGTTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACCTTCCTCCAAGTTCGAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCCTTTTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTTGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGTAGTTGACGGCGTCCGCTGTGCTTCATCTTCAAATGTTGGCAGTTCACAGCGTGGTGAAGTCACTGCAATTGAATCTGATGACGACCGTTGTAGGCGAGTCGGGTCTGGTGACCACCCCTGCAGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGGTGCATCACTGAAGGCGAGTCTGATGACTACCCCTGCAGGTTACTCAGATCACCCAATGAAATAGGGGACTGGTTTAGCAGGAGAGAGATCACTGCAAGTGAAGCTGGTGACGACCGTTGCACGAAGCTTACACATTCAAGCAAGAAAGAAACAAATTGCAATAATATATGTGCAAAGAAAAAAATGGAAGCCAAAAGCTCTATAGGGGATTCAGATTTGGAGACAGAGTCAGAGAACTCAGAGTCCAGAGCATTCTGCCAGAGTCCAGAGTCGGCAGGTCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGTCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAGGAAGATCAACAAGCCAACAAGCCAACAAGCCGATCCAGGAGATCATCACGCCAACAGGCCGATCATTCAAGAAGATCAACAAGCCCAATAGGTCGATCCAGGAGATCATCAACCTAACAGGCCGATCATCCAAGAAGATCAACAAGTCCAATAGGTCGATCCAGGAGATCATCAACCTAACAGACCGATCATCCAAGAAGATCAACAAGCCAATAAGCCGATCCAAGAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAACCTAGCAAGTTGATCATCTAA

Coding sequence (CDS)

ATGGAAATTGCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACATCGCTTCGTTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCATATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTCGCTGCAGTTTCTTCTCCCTAACTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTTACGCGCTTCGCTGCAGTTTCTTCTCCCTAAGTTCGAAGGTTCTCACGCGCTTCGATGCAGTTCCTTCCTCCCTAAGTTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCACGCGCTGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGTGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCCTTCTCCAAATTCGAAGGCGCTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGTTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACCTTCCTCCAAGTTCGAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCCTTTTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTTGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGTAGTTGACGGCGTCCGCTGTGCTTCATCTTCAAATGTTGGCAGTTCACAGCGTGGTGAAGTCACTGCAATTGAATCTGATGACGACCGTTGTAGGCGAGTCGGGTCTGGTGACCACCCCTGCAGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGGTGCATCACTGAAGGCGAGTCTGATGACTACCCCTGCAGGTTACTCAGATCACCCAATGAAATAGGGGACTGGTTTAGCAGGAGAGAGATCACTGCAAGTGAAGCTGGTGACGACCGTTGCACGAAGCTTACACATTCAAGCAAGAAAGAAACAAATTGCAATAATATATGTGCAAAGAAAAAAATGGAAGCCAAAAGCTCTATAGGGGATTCAGATTTGGAGACAGAGTCAGAGAACTCAGAGTCCAGAGCATTCTGCCAGAGTCCAGAGTCGGCAGGTCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGTCGATCATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAGGAAGATCAACAAGCCAACAAGCCAACAAGCCGATCCAGGAGATCATCACGCCAACAGGCCGATCATTCAAGAAGATCAACAAGCCCAATAGGTCGATCCAGGAGATCATCAACCTAACAGGCCGATCATCCAAGAAGATCAACAAGTCCAATAGGTCGATCCAGGAGATCATCAACCTAACAGACCGATCATCCAAGAAGATCAACAAGCCAATAAGCCGATCCAAGAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAACCTAGCAAGTTGATCATCTAA

Protein sequence

MEIASSKFEGSHALRCSSFPPNSKVLTRFAAVPSPKFEVPSPKFEGSHIASLQFLPPSLKVLISLRFALRFVAVPSSKFEGSHTLRCSFFSLTSKVLTRFAAVPSSKFEGSYALRCSFFSLSSKVLTRFDAVPSSLSSKVLTRFAAVPSSKFEGFEGSHALFSHALLQLLPPSSKVPSRASLAPSPSSKALLSTAPSPSSKALLSTAPSPSSKALLSVAPSPSSKALLSVATSPSSKALLSAAPSPNSKALLSAAPSPSSKALLSAAPSPSSKALLSVVPSPSSKALLSVATSPSSKALLSTAPSPSSKALLSVATFLQVRSSKALLSTAPSPSSKALLSAAPSPSSKALLSTAPSPSSKALLSTAPFPSSKVLLSTPLFEGLPLRFSFSKFEGSPLLLFKCLAAVDVLVPLHLQMLVVDGVRCASSSNVGSSQRGEVTAIESDDDRCRRVGSGDHPCRSASLKANLVTTPAGYSDHPIKWGLGLAGVHEGESGDYPCRLLRSPNKMGTGLAGCITEGESDDYPCRLLRSPNEIGDWFSRREITASEAGDDRCTKLTHSSKKETNCNNICAKKKMEAKSSIGDSDLETESENSESRAFCQSPESAGRSSKRINKLTSRSNRSSSQQADPRDQQANRPIKKINKSAGRSSKRSTSQPTDQEDQQRSTSQPTDQEDQQVSRSIIQEINKPTDRSRRSTSQQADHPGRSTSQQANKPIQEIITPTGRSFKKINKPNRSIQEIINLTGRSSKKINKSNRSIQEIINLTDRSSKKINKPISRSKRSSSQQADPRDHQPSKLII

Homology

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BLAST of Lag0001629 vs. NCBI nr
Match: XP_029629902.1 (putative protein TPRXL [Salmo trutta])

HSP 1 Score: 83.6 bits (205), Expect = 8.6e-12
Identity = 116/240 (48.33%), Postives = 156/240 (65.00%), Query Frame = 0


Query: 172 PSSKVPSRASL-----APSPSSKALLS--TAPSPSSKALLS--TAPSPSSKALLS--VAP 231
           P S  PS +SL     +PSPS+ +LLS   +PSPSS  LLS   +PSPS+ +LLS   +P
Sbjct: 51  PRSPSPSNSSLLSGPRSPSPSNSSLLSGPRSPSPSSPNLLSGPRSPSPSNSSLLSGPRSP 110

Query: 232 SPSSKALLS--VATSPSSKALLSA--APSPNSKALLSA--APSPSSKALLSA--APSPSS 291
           SPS+ +LLS   + SPSS  LLS   +PSP++ +LLS   +PSPS+ +LLS   +PSPSS
Sbjct: 111 SPSNSSLLSGPRSPSPSSPNLLSGPRSPSPSNSSLLSGPRSPSPSNSSLLSGPRSPSPSS 170

Query: 292 KALLS--VVPSPSSKALLS--VATSPSSKALLS--TAPSPSSKALLSVATFLQVRSSKAL 351
             LLS    PSPS+ +LLS   + SPS+ +LLS   +PSPS+ +LLS        SS +L
Sbjct: 171 PNLLSGPRSPSPSNPSLLSGPRSPSPSNSSLLSGPRSPSPSNSSLLS-GPRSPSPSSSSL 230

Query: 352 LS--TAPSPSSKALLSA--APSPSSKALLS--TAPSPSSKALLS--TAPFPSSKVLLSTP 379
           LS   +PSPS+ +LLS   +PSPS+ +LLS   +PSPS+ +LLS   +P PS+  LLS P
Sbjct: 231 LSGPRSPSPSNSSLLSGPRSPSPSNSSLLSGPRSPSPSNSSLLSGPRSPSPSNSSLLSGP 289

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BLAST of Lag0001629 vs. NCBI nr
Match: CAE6523816.1 (Tir4p [Saccharomyces cerevisiae PE-2] >CAF1605517.1 Tir4p [Saccharomyces cerevisiae PE-2])

HSP 1 Score: 82.0 bits (201), Expect = 2.5e-11
Identity = 111/381 (29.13%), Postives = 206/381 (54.07%), Query Frame = 0


Query: 3    IASSKFEGSHALRCSSFPPNSKVLTRFAAVPSPKFEVPSPKFEGSHIASLQFLPPSLKVL 62
            ++SS    S  +  SS  P+S  +   +  PS    V S     S       + PS   +
Sbjct: 1204 VSSSVASSSSEVASSSVAPSSSEVVSSSVAPSSSEVVSSSVAPSSSEVVSSSVAPSSSEV 1263

Query: 63   ISLRFALRFVAVPSSKF--EGSHTLRCSFFSLTSKVLTRFAAVPSSKFEGSYALRCSFFS 122
            +S   A     V SS      S  +  S  S +S+V +   A  SS+   S     S   
Sbjct: 1264 VSSSVASSSSEVASSSVAPSSSEVVSSSVASSSSEVASSSVAPSSSEVVSSSVAPSSSEV 1323

Query: 123  LSSKVLTRFDAVPSS----LSSKVLTRFAAVPSSKFEGFEGSHALFSHALLQLLPPSSKV 182
            +SS V      V SS     SS+V++  ++V SS  E    S A  S  ++     SS  
Sbjct: 1324 VSSSVAPSSSEVVSSSVAPSSSEVVS--SSVASSSSEVASSSVAPSSSEVVSSSVASSS- 1383

Query: 183  PSRASLAPSPSSKALLSTAPSPSSKALLSTAPSPSSKALLSVAPSPSSKALLSVATSPSS 242
               AS + +PSS  ++S++ +PSS  ++S++ +PSS  ++S + +PSS  ++S + +PSS
Sbjct: 1384 SEVASSSVAPSSSEVVSSSVAPSSSEVVSSSVAPSSSEVVSSSVAPSSSEVVSSSVAPSS 1443

Query: 243  KALLSAAPSPNSKALLSAAPSPSSKALLSAAPSPSSKALLSVVPSPSSKALLSVATSPSS 302
              ++S++ +P+S  ++S++ +PSS  ++S++ +PSS  ++S   +PSS  ++S + +PSS
Sbjct: 1444 SEVVSSSVAPSSSEVVSSSVAPSSSEVVSSSVAPSSSEVVSSSVAPSSSEVVSSSVAPSS 1503

Query: 303  KALLSTAPSPSSKALLSVATFLQVRSSKALLSTAPSPSSKALLSAAPSPSSKALLSTAPS 362
              ++S++ +PSS  ++S +      SS  ++S++ +PSS  ++S++ +PSS  ++S++ +
Sbjct: 1504 SEVVSSSVAPSSSEVVSSSV---APSSSEVVSSSVAPSSSEVVSSSVAPSSSEVVSSSVA 1563

Query: 363  PSSKALLSTAPFPSSKVLLST 378
            PSS  ++S++  PSS  ++S+
Sbjct: 1564 PSSSEVVSSSVAPSSSEVVSS 1578

[Close]

BLAST of Lag0001629 vs. NCBI nr
Match: XP_014181724.1 (beta strand repeat-containing protein [Trichosporon asahii var. asahii CBS 2479] >EJT50776.1 beta strand repeat-containing protein [Trichosporon asahii var. asahii CBS 2479])

HSP 1 Score: 79.3 bits (194), Expect = 1.6e-10
Identity = 104/269 (38.66%), Postives = 139/269 (51.67%), Query Frame = 0


Query: 120  SLSSKVLTRFDAVPSSLSSKVLTRFAAVPSSKFEGFEGSHALFSHALLQLLPPSSKVPSR 179
            S SS      +  PS+ ++ VL   +A  +S  E    ++   +     L  PS+ V S 
Sbjct: 988  SPSSNATASAEPTPSANATSVLPEPSANVTSSVEPSPSANVTSA-----LPSPSANVTS- 1047

Query: 180  ASLAPSPSSKALLSTAPSPSSKALLSTAPSPSSKALLSVAPSPSSKALLSVATSPSSKAL 239
             S+ PSPS+ A  S  PSPS+ A  S  PSPS+ A  SV PSPS+ A  SV  SPS+ A 
Sbjct: 1048 -SVEPSPSANA-TSALPSPSANATASAEPSPSANA-TSVLPSPSANATSSVEPSPSANAT 1107

Query: 240  LSAAPSPNSKALLSAAPSPSSKALLSA------APSPSSKALLSVVPSPSSKALLSVATS 299
             SA PSP         PSPS+ A  +A      +PSPS+ A  SV PSPS+  + S   S
Sbjct: 1108 ASAEPSPTGNVTAPIEPSPSASASANATISAEPSPSPSANASASVEPSPSAN-VTSALPS 1167

Query: 300  PSSKALLSTAPSPSSKALLSVATFLQVRSSKALLSTAPSPSSKALL--SAAPSPSSKALL 359
            PS+ A  S  PSPS+ A ++ +      S+    S  PSPS+ A +  S  PSPS+ A +
Sbjct: 1168 PSANATSSVEPSPSANATITPSPSTSA-SANVTSSVEPSPSASANVTSSVEPSPSANAAI 1227

Query: 360  ----STAPSPSSKALLSTAPFPSSKVLLS 377
                S +PSPS+ A  S  P PS+ V  S
Sbjct: 1228 SASASASPSPSANATSSVEPSPSANVTSS 1245

[Close]

BLAST of Lag0001629 vs. NCBI nr
Match: EKD01924.1 (beta strand repeat-containing protein [Trichosporon asahii var. asahii CBS 8904])

HSP 1 Score: 79.3 bits (194), Expect = 1.6e-10
Identity = 104/269 (38.66%), Postives = 139/269 (51.67%), Query Frame = 0


Query: 120  SLSSKVLTRFDAVPSSLSSKVLTRFAAVPSSKFEGFEGSHALFSHALLQLLPPSSKVPSR 179
            S SS      +  PS+ ++ VL   +A  +S  E    ++   +     L  PS+ V S 
Sbjct: 998  SPSSNATASAEPTPSANATSVLPEPSANVTSSVEPSPSANVTSA-----LPSPSANVTS- 1057

Query: 180  ASLAPSPSSKALLSTAPSPSSKALLSTAPSPSSKALLSVAPSPSSKALLSVATSPSSKAL 239
             S+ PSPS+ A  S  PSPS+ A  S  PSPS+ A  SV PSPS+ A  SV  SPS+ A 
Sbjct: 1058 -SVEPSPSANA-TSALPSPSANATASAEPSPSANA-TSVLPSPSANATSSVEPSPSANAT 1117

Query: 240  LSAAPSPNSKALLSAAPSPSSKALLSA------APSPSSKALLSVVPSPSSKALLSVATS 299
             SA PSP         PSPS+ A  +A      +PSPS+ A  SV PSPS+  + S   S
Sbjct: 1118 ASAEPSPTGNVTAPIEPSPSASASANATISAEPSPSPSANASASVEPSPSAN-VTSALPS 1177

Query: 300  PSSKALLSTAPSPSSKALLSVATFLQVRSSKALLSTAPSPSSKALL--SAAPSPSSKALL 359
            PS+ A  S  PSPS+ A ++ +      S+    S  PSPS+ A +  S  PSPS+ A +
Sbjct: 1178 PSANATSSVEPSPSANATITPSPSTSA-SANVTSSVEPSPSASANVTSSVEPSPSANATI 1237

Query: 360  ----STAPSPSSKALLSTAPFPSSKVLLS 377
                S +PSPS+ A  S  P PS+ V  S
Sbjct: 1238 SASASASPSPSANATSSVEPSPSANVTSS 1255

[Close]

BLAST of Lag0001629 vs. NCBI nr
Match: MBN3304609.1 (FA47C protein [Amia calva])

HSP 1 Score: 78.2 bits (191), Expect = 3.6e-10
Identity = 75/241 (31.12%), Postives = 129/241 (53.53%), Query Frame = 0


Query: 135 SLSSKVLTRFAAVPSSKFEGFEGSHALFSHALLQLLPPSSKVPSRASLAPSPSSKALLST 194
           S  +++L      PSS  E            LL  L PS       +L PSP ++ L + 
Sbjct: 126 STDTELLNTLTLQPSSDTELLTTLQPSPDTELLTTLQPSPDTELLTTLQPSPDTELLTTL 185

Query: 195 APSPSSKALLSTAPSPSSKALLSVAPSPSSKALLSVATSPSSKALLSAAPSPNSKALLSA 254
            PSP ++ L +  PSP ++ L ++ PSP ++ L ++  SP ++ L +  PSP+++ L + 
Sbjct: 186 QPSPDTELLTTLQPSPDTELLTTLQPSPDTELLTTLQPSPDTELLTTLQPSPDTELLTTL 245

Query: 255 APSPSSKALLSAAPSPSSKALLSVVPSPSSKALLSVATSPSSKALLSTAPSPSSKALLSV 314
            PSP ++ L +  PSP ++ L ++ PSP ++ L ++  SP ++ L +  PSP ++ L   
Sbjct: 246 QPSPDTELLTTLQPSPDTELLTTLQPSPDTELLTTLQPSPDTELLTTLQPSPDTELL--- 305

Query: 315 ATFLQVRSSKALLST-APSPSSKALLSAAPSPSSKALLSTAPSPSSKALLSTAPFPSSKV 374
            T LQ      LL+T  PSP ++ L +  PSP ++ L +  PSP ++ L +  P P +++
Sbjct: 306 -TTLQPSPDTELLTTLQPSPDTELLTTLQPSPDTELLTTLQPSPDTELLTTLQPSPDTEL 362

[Close]

BLAST of Lag0001629 vs. ExPASy TrEMBL
Match: J5TG80 (Beta strand repeat-containing protein OS=Trichosporon asahii var. asahii (strain ATCC 90039 / CBS 2479 / JCM 2466 / KCTC 7840 / NBRC 103889/ NCYC 2677 / UAMH 7654) OX=1186058 GN=A1Q1_08102 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 7.9e-11
Identity = 104/269 (38.66%), Postives = 139/269 (51.67%), Query Frame = 0


Query: 120  SLSSKVLTRFDAVPSSLSSKVLTRFAAVPSSKFEGFEGSHALFSHALLQLLPPSSKVPSR 179
            S SS      +  PS+ ++ VL   +A  +S  E    ++   +     L  PS+ V S 
Sbjct: 988  SPSSNATASAEPTPSANATSVLPEPSANVTSSVEPSPSANVTSA-----LPSPSANVTS- 1047

Query: 180  ASLAPSPSSKALLSTAPSPSSKALLSTAPSPSSKALLSVAPSPSSKALLSVATSPSSKAL 239
             S+ PSPS+ A  S  PSPS+ A  S  PSPS+ A  SV PSPS+ A  SV  SPS+ A 
Sbjct: 1048 -SVEPSPSANA-TSALPSPSANATASAEPSPSANA-TSVLPSPSANATSSVEPSPSANAT 1107

Query: 240  LSAAPSPNSKALLSAAPSPSSKALLSA------APSPSSKALLSVVPSPSSKALLSVATS 299
             SA PSP         PSPS+ A  +A      +PSPS+ A  SV PSPS+  + S   S
Sbjct: 1108 ASAEPSPTGNVTAPIEPSPSASASANATISAEPSPSPSANASASVEPSPSAN-VTSALPS 1167

Query: 300  PSSKALLSTAPSPSSKALLSVATFLQVRSSKALLSTAPSPSSKALL--SAAPSPSSKALL 359
            PS+ A  S  PSPS+ A ++ +      S+    S  PSPS+ A +  S  PSPS+ A +
Sbjct: 1168 PSANATSSVEPSPSANATITPSPSTSA-SANVTSSVEPSPSASANVTSSVEPSPSANAAI 1227

Query: 360  ----STAPSPSSKALLSTAPFPSSKVLLS 377
                S +PSPS+ A  S  P PS+ V  S
Sbjct: 1228 SASASASPSPSANATSSVEPSPSANVTSS 1245

[Close]

BLAST of Lag0001629 vs. ExPASy TrEMBL
Match: K1WKY3 (Beta strand repeat-containing protein OS=Trichosporon asahii var. asahii (strain CBS 8904) OX=1220162 GN=A1Q2_03770 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 7.9e-11
Identity = 104/269 (38.66%), Postives = 139/269 (51.67%), Query Frame = 0


Query: 120  SLSSKVLTRFDAVPSSLSSKVLTRFAAVPSSKFEGFEGSHALFSHALLQLLPPSSKVPSR 179
            S SS      +  PS+ ++ VL   +A  +S  E    ++   +     L  PS+ V S 
Sbjct: 998  SPSSNATASAEPTPSANATSVLPEPSANVTSSVEPSPSANVTSA-----LPSPSANVTS- 1057

Query: 180  ASLAPSPSSKALLSTAPSPSSKALLSTAPSPSSKALLSVAPSPSSKALLSVATSPSSKAL 239
             S+ PSPS+ A  S  PSPS+ A  S  PSPS+ A  SV PSPS+ A  SV  SPS+ A 
Sbjct: 1058 -SVEPSPSANA-TSALPSPSANATASAEPSPSANA-TSVLPSPSANATSSVEPSPSANAT 1117

Query: 240  LSAAPSPNSKALLSAAPSPSSKALLSA------APSPSSKALLSVVPSPSSKALLSVATS 299
             SA PSP         PSPS+ A  +A      +PSPS+ A  SV PSPS+  + S   S
Sbjct: 1118 ASAEPSPTGNVTAPIEPSPSASASANATISAEPSPSPSANASASVEPSPSAN-VTSALPS 1177

Query: 300  PSSKALLSTAPSPSSKALLSVATFLQVRSSKALLSTAPSPSSKALL--SAAPSPSSKALL 359
            PS+ A  S  PSPS+ A ++ +      S+    S  PSPS+ A +  S  PSPS+ A +
Sbjct: 1178 PSANATSSVEPSPSANATITPSPSTSA-SANVTSSVEPSPSASANVTSSVEPSPSANATI 1237

Query: 360  ----STAPSPSSKALLSTAPFPSSKVLLS 377
                S +PSPS+ A  S  P PS+ V  S
Sbjct: 1238 SASASASPSPSANATSSVEPSPSANVTSS 1255

[Close]

BLAST of Lag0001629 vs. ExPASy TrEMBL
Match: A0A6F9CF75 (Uncharacterized protein OS=Coregonus sp. 'balchen' OX=861768 GN=CSTEINMANNI_LOCUS3957702 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 6.7e-10
Identity = 77/205 (37.56%), Postives = 118/205 (57.56%), Query Frame = 0


Query: 171 PPSSKVPSRASLAPSPSSKALLSTAPSPSSKALLSTAPSPSSKALLSVAPSPSSKALLSV 230
           P  + +P  ++  P+PS+  L +  P+PS+  L +  P+PS+  L +  P+PS+  L + 
Sbjct: 209 PSQTPLPLLSTAQPNPSASLLSTAQPNPSASLLSTAQPNPSASLLSTAQPNPSASLLSTA 268

Query: 231 ATSPSSKALLSAAPSPNSKALLSAAPSPSSKALLSAAPSPSSKALLSVVPSPSSKALLSV 290
             +PS+  L  A P+P+   L +A P+PS   L +A P+PS   L +  P+PS+ +LLS 
Sbjct: 269 QPNPSASLLSKAQPNPSVSLLSTAQPNPSVSLLSTAQPNPSVSLLSTAQPNPSA-SLLST 328

Query: 291 ATSPSSKALLSTAPSPSSKALLSVATFLQVRSSKALLSTA-PSPSSKALLSAAPSPSSKA 350
           A    S +LLSTA    S +LLS A   Q   S +LLSTA P+PS   L +A P+PS+  
Sbjct: 329 AQPNPSASLLSTAQPNPSASLLSTA---QPNPSASLLSTAQPNPSVSLLSTAQPNPSASL 388

Query: 351 LLSTAPSPSSKALLSTAPFPSSKVL 375
           L +  P+PS+  L +  P PS+ +L
Sbjct: 389 LSTAQPNPSASLLSTAQPNPSASLL 409

[Close]

BLAST of Lag0001629 vs. ExPASy TrEMBL
Match: V5BAB7 (DEAD/DEAH box helicase domain-containing protein (Fragment) OS=Toxoplasma gondii (strain ATCC 50861 / VEG) OX=432359 GN=TGVEG_226090A PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 9.6e-09
Identity = 74/141 (52.48%), Postives = 82/141 (58.16%), Query Frame = 0


Query: 172 PSSKVPSRASLAPSPSSKALLSTAPSPSSKALLSTAPSPSSKALLSVAPSPSSKALLSVA 231
           P+    + +S A SPSS   LS A SPSS   LS A SPSS   LS A SPSS   LS A
Sbjct: 243 PNDPASTSSSPASSPSSSPSLSPASSPSSSPSLSPASSPSSSPSLSPASSPSSSPSLSPA 302

Query: 232 TSPSSKALLSAAPSPNSKALLSAAPSPSSKALLSAAPSPSSKALLSVVPSPSSKALLSVA 291
           +SPSS   LS A SP+S   LS A SPSS   LS A SPSS   LS   SPSS   LS A
Sbjct: 303 SSPSSSPSLSPASSPSSSPSLSPASSPSSSPSLSPASSPSSSPSLSPASSPSSSPSLSPA 362

Query: 292 TSPSSKALLSTAPSPSSKALL 313
           +SPSS   LS  P+ S + LL
Sbjct: 363 SSPSSSPSLS--PASSRRGLL 381

[Close]

BLAST of Lag0001629 vs. ExPASy TrEMBL
Match: A0A0F7V8R5 (RNA helicase, putative OS=Toxoplasma gondii (strain ATCC 50861 / VEG) OX=432359 GN=BN1205_067065 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 9.6e-09
Identity = 74/141 (52.48%), Postives = 82/141 (58.16%), Query Frame = 0


Query: 172 PSSKVPSRASLAPSPSSKALLSTAPSPSSKALLSTAPSPSSKALLSVAPSPSSKALLSVA 231
           P+    + +S A SPSS   LS A SPSS   LS A SPSS   LS A SPSS   LS A
Sbjct: 243 PNDPASTSSSPASSPSSSPSLSPASSPSSSPSLSPASSPSSSPSLSPASSPSSSPSLSPA 302

Query: 232 TSPSSKALLSAAPSPNSKALLSAAPSPSSKALLSAAPSPSSKALLSVVPSPSSKALLSVA 291
           +SPSS   LS A SP+S   LS A SPSS   LS A SPSS   LS   SPSS   LS A
Sbjct: 303 SSPSSSPSLSPASSPSSSPSLSPASSPSSSPSLSPASSPSSSPSLSPASSPSSSPSLSPA 362

Query: 292 TSPSSKALLSTAPSPSSKALL 313
           +SPSS   LS  P+ S + LL
Sbjct: 363 SSPSSSPSLS--PASSRRGLL 381

The following BLAST results are available for this feature:

BLAST of Lag0001629 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_029629902.1	8.6e-12	48.33	putative protein TPRXL [Salmo trutta]	[more]
CAE6523816.1	2.5e-11	29.13	Tir4p [Saccharomyces cerevisiae PE-2] >CAF1605517.1 Tir4p [Saccharomyces cerevis...	[more]
XP_014181724.1	1.6e-10	38.66	beta strand repeat-containing protein [Trichosporon asahii var. asahii CBS 2479]...	[more]
EKD01924.1	1.6e-10	38.66	beta strand repeat-containing protein [Trichosporon asahii var. asahii CBS 8904]	[more]
MBN3304609.1	3.6e-10	31.12	FA47C protein [Amia calva]	[more]

BLAST of Lag0001629 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0001629 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
J5TG80	7.9e-11	38.66	Beta strand repeat-containing protein OS=Trichosporon asahii var. asahii (strain...	[more]
K1WKY3	7.9e-11	38.66	Beta strand repeat-containing protein OS=Trichosporon asahii var. asahii (strain...	[more]
A0A6F9CF75	6.7e-10	37.56	Uncharacterized protein OS=Coregonus sp. 'balchen' OX=861768 GN=CSTEINMANNI_LOCU...	[more]
V5BAB7	9.6e-09	52.48	DEAD/DEAH box helicase domain-containing protein (Fragment) OS=Toxoplasma gondii...	[more]
A0A0F7V8R5	9.6e-09	52.48	RNA helicase, putative OS=Toxoplasma gondii (strain ATCC 50861 / VEG) OX=432359 ...	[more]

BLAST of Lag0001629 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 577..592
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 647..685
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 751..769
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 577..730
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 751..798
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 699..719
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 593..632

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0001629.1	Lag0001629.1	mRNA