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Lag0001582 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCGAGCTCTTTGAAGCAGCAGCGGCCGGAGGCGACATGGACGGCGAAGCAGAACAAGCTGTTCGAGAAGGCATTGGCTTTGTACGACAAAGAGACACCTGAGCGATGGCAGAATATCGCCATGGCCGTCGGCGGGAAGTCGGCCGACGAAGTCAAAAGACACTATGAGATACTCTTGGAAGATCTCCGGCGGATCGAGTCCGGCCGTGTTCCTATTCCCAATTACAGAGGCGCCGGCAATGGAGATGAAGAGTTGAGGTTAGTGAAGATGATCAAGGATAGGAACCATTTTGAACTCAAAAGCTCATTGTTTTTATTTTCTATTTTTTACCATTTAAACCATGCATCTGTTGGTCATTGTTACAAGTATCATGTCAGTTAG ATGGCTTCGAGCTCTTTGAAGCAGCAGCGGCCGGAGGCGACATGGACGGCGAAGCAGAACAAGCTGTTCGAGAAGGCATTGGCTTTGTACGACAAAGAGACACCTGAGCGATGGCAGAATATCGCCATGGCCGTCGGCGGGAAGTCGGCCGACGAAGTCAAAAGACACTATGAGATACTCTTGGAAGATCTCCGGCGGATCGAGTCCGGCCGTGTTCCTATTCCCAATTACAGAGGCGCCGGCAATGGAGATGAAGAGTTGAGGTTAGTGAAGATGATCAAGGATAGGAACCATTTTGAACTCAAAAGCTCATTGTTTTTATTTTCTATTTTTTACCATTTAAACCATGCATCTGTTGGTCATTGTTACAAGTATCATGTCAGTTAG ATGGCTTCGAGCTCTTTGAAGCAGCAGCGGCCGGAGGCGACATGGACGGCGAAGCAGAACAAGCTGTTCGAGAAGGCATTGGCTTTGTACGACAAAGAGACACCTGAGCGATGGCAGAATATCGCCATGGCCGTCGGCGGGAAGTCGGCCGACGAAGTCAAAAGACACTATGAGATACTCTTGGAAGATCTCCGGCGGATCGAGTCCGGCCGTGTTCCTATTCCCAATTACAGAGGCGCCGGCAATGGAGATGAAGAGTTGAGGTTAGTGAAGATGATCAAGGATAGGAACCATTTTGAACTCAAAAGCTCATTGTTTTTATTTTCTATTTTTTACCATTTAAACCATGCATCTGTTGGTCATTGTTACAAGTATCATGTCAGTTAG MASSSLKQQRPEATWTAKQNKLFEKALALYDKETPERWQNIAMAVGGKSADEVKRHYEILLEDLRRIESGRVPIPNYRGAGNGDEELRLVKMIKDRNHFELKSSLFLFSIFYHLNHASVGHCYKYHVS Homology
BLAST of Lag0001582 vs. NCBI nr
Match: XP_023554816.1 (protein RADIALIS-like 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 181.0 bits (458), Expect = 6.4e-42 Identity = 89/94 (94.68%), Postives = 91/94 (96.81%), Query Frame = 0
BLAST of Lag0001582 vs. NCBI nr
Match: XP_022975322.1 (protein RADIALIS-like 3 [Cucurbita maxima]) HSP 1 Score: 177.2 bits (448), Expect = 9.2e-41 Identity = 87/94 (92.55%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of Lag0001582 vs. NCBI nr
Match: XP_022952671.1 (protein RADIALIS-like 3 [Cucurbita moschata]) HSP 1 Score: 176.8 bits (447), Expect = 1.2e-40 Identity = 87/94 (92.55%), Postives = 89/94 (94.68%), Query Frame = 0
BLAST of Lag0001582 vs. NCBI nr
Match: KAG6572047.1 (Protein RADIALIS-like 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 176.4 bits (446), Expect = 1.6e-40 Identity = 86/94 (91.49%), Postives = 89/94 (94.68%), Query Frame = 0
BLAST of Lag0001582 vs. NCBI nr
Match: XP_038888995.1 (protein RADIALIS-like 3 isoform X1 [Benincasa hispida]) HSP 1 Score: 176.0 bits (445), Expect = 2.0e-40 Identity = 85/94 (90.43%), Postives = 88/94 (93.62%), Query Frame = 0
BLAST of Lag0001582 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 8.1e-24 Identity = 56/98 (57.14%), Postives = 71/98 (72.45%), Query Frame = 0
BLAST of Lag0001582 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.1e-23 Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 0
BLAST of Lag0001582 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.4e-23 Identity = 55/101 (54.46%), Postives = 74/101 (73.27%), Query Frame = 0
BLAST of Lag0001582 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 2.0e-22 Identity = 49/78 (62.82%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of Lag0001582 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.7e-21 Identity = 43/67 (64.18%), Postives = 58/67 (86.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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