Lag0001557 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0001557
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRNase H domain-containing protein
Locationchr4: 32817838 .. 32823000 (-)
RNA-Seq ExpressionLag0001557
SyntenyLag0001557
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGATCAAGAAGACAAGGCGATACGAGATTATTTCTTGTCTGAGTTACCATTGAACTACTATGGGATAACATATGAGCCAATAGCTACTGAACATTTTGAGCTCGAGGCTAGTCTTATTCAAATGGTTCGAGAGAGTGCTTTCAAAGGACCTCCATCAAAAGATCCACACAGTCATTTGCATTCATTTTTGGATATCTATGGAACGGTAAAAATTAACGGAGTTAGTCTTGACGCTATTTGCTTGCAATTATTTCCTTTTTCTTTGCAGGACAGGGTGAGAATTTGGTTAGATTCTTTAACTCCAAACAATATTTTTAATTGGAATGATTTGGTTAAGGTTTTTCTTACAAAATTTTTCTCATTAGCAAAAATTACAAAGCTCAAAACTGAAATTGATTTATTTAAACAAAATGGAAAATGAGCAACTATATGAGGCTTGGGAACGTTATAAAGACATATTAAGGAAATGCCTACAACATGGGTACCCTGACTGGTTTCAGGTGCAACTCTTCTATAATGGTTTAATGCATGAATTTAAAACCATTCTTGACACTGCGGCTGGAGGAAACTTTTTAACCAAAACTATCAAGGATGCTCGAGCCTTAATAGAAGAGTTGACTCTAACAAGTTACCCGTGACCATTTGAGCAATCAGAATCCAAACCAAAGGGGGGACCATGTGAAACCCATGAGGCAAGTTCTTTGAAATTTCAAGTTGAAGCACTAACAGAGGCCTTGAATAGATTCTCAGGATCAGAGATTCCAAGCTTCGCCTAAAGCAAGCAATGAAAAATCTCAAGTGGAAGTGGAGTCTCAACCAGAAGAAACAATTCATCAAGAGAAGAAAAATTCTTTGAAGGACATGTTAGGAAAGTTTATTGAAGAGACCAAGAATTTGTCGAATGATGTTCGAGCTTGTCTCTCTCTCAGATTTGCCGCCTCCGTGAGTCCAAATGCATGTCGTCTATCGTCGTTCGTGAATCGCCGCCGGTCAGTCCCATCTCAGATGGTTGGGCATGAATATTAAATATTTAAAAGTTAAATATTTGAGATAAACAATATTTGTGGTTGAATATGCAAGATAATTAAATGCAGTGGAATTAAATTGTTGTCACATCAGAATAGTCGAGGTGTGCTCACATATATTCAAAAGAAACCAAGATAATTAGTATTTTGAATTTTATTTTGAGGTAGTAGTATTTCGAAATTAAATGTCTTTGTTCTTTTATCAAATTTTGTGAACTCAAGATTTATTCGTTATTTGATTTCTATTTATTATTATTATTATTTTTTTTTAACAATAACACATACTTGATGCCAATTGAGCTATGCTCTTGTTGACTTCTATTTATTATTTTGAACTCATATGCACTCGAACATAATTTTATATTATTTAATACAAAATATTTATTAACTTATGAATGTTAATATTGAAATTTAATTTAAAATTTTTAATTGAAAGTGATACTAAATGCTTTTTTTTTTTTTAAAAAAAAAGGTGATACTAAATACTTGATTATTTTAATTTTTAAAAATAAATTAATTTCAAATGAATCCATAAAGATGTGTAGATATAAATTATAGGTGATAATTGAAATTAAATCATGGGCATCTATCTTTCTTCTTTAATCATTTTTATAGTCAATTTGAACTCTAAATTTAGATAAGTGTCATAATTTTTATCCGTATTTAAATCCTTCTAATCACTTGTAAGAAATTTAAAAAACTCACTAATTTAACAAAAATCAAGTTTTACACAAAAGTAAATTTGATCTGCATACAAATTTAGCCATTAAATAACTCCACCAAAACTTAAAAATTTTAACAAAAACTATTTCTAATATCATAGTTATTTTAATCTAGTAAACATATATTTTATAATTCATTAAACATACATTATAATACTTTTTTAAATGACTCCTCAAAGAATATCTACATTAAGTTATAAATTGCAACATTTTAATAAAGTTTAGGGTGAAAGTTAGTTTGATGTGCAATTTGATGAAATTGAAAGATTACGGTAAAAGTTACTTTTGTCCCCTTCTTTGCATTACTTTTGTCGCTGTCTACTGTGACGCCGTGTCTACTGTGAAGCCCCATGCATTATTGGTGTATTTAGATTCCATGTAATTAGTCGAAAGAAATGTAATTATTATTTGGACTTGAATTATGGTATTATTAATTTTACACCAGGGTGTTTGAAAATTCATTTTTGGGAATTAAACGTTGTATTAATTTAAATCCCTCTCTAAACTCGTTAATTCTAGTCACCGTTGTTATAAGGTCTATTAATGCTTTAAAATTGTTACGCGGAATTAAGAAAAATGGTTGAAAGTTGTAAGAAGTTTTTTTTTTTTTTTTTTTTGAAAAAGGAACCTCATTAACATGAGCTGGTTCCATAAAAAGGTAACCTCCAGGAAGAAGAAGAATGAAATTAATGGTATCTTAGATAATGAAAGGTGTTGGAAGGATAAAGAAAAAGATATTGGAGAGGTGGTTGGCAACTATTTCTCCAAGCTTTTTAGCTCCATTCAGCCCTCCGAATACCTAATGGACAGAGCAGTAGATGGGGTTGAGCATGTCCTTTTAGATCAGCAGAATCAGCAGCTCAGGAAGAAAGCCGTGAAAGAGATGCATCCTACCAATGCCCTCGGGCCCGATGATGCTCATGCCCTCTTTTATAAAAAATTTTGGAATACAGTGGGGATCAAGTCAGTGCAGTGTGCTTAAAAGTGCTCAATGAGAATGAATGTGTTAAGCCCCTAAATAACACTTGGATTGCTATCATACTTAAAGTGTCTAATCCAAGAGACATGGAGGATTTTAGACCTATAAGCCTACAAATGTTATCTACAAGTTGGTGGCTAAAACGATTGTCAATAGGCTAAAAACGGTTCTAGATTCTATTATCTCTCTCAATAATCAACCTTTGTTCCCGGGCAGCTAATCAGACATAATGTTATTGTGGGTTTCGAAAGTATTCATGCTTTAAATCAAAGAAGAAAAGGTAAAGTTGGGTATGAAACCATTAAGCTTGACATGTCCAAAGCGTACGACAAAGTTGAGTGGCCTTTCATTAGAAGAATTATGTTCAAGATGGGGTTTGATGAGAGTTGGATAGAGAAGGTCATGAACTGCATGAAATCATTCAGATTTTCAGTGCTCATTAATGGCGAGCCTTATCAAATCTGAGACCCAACCAGAGGGCTTAGATAGGGAGATCCATTATCTCCCTATCTCTTTCTCCTTTGTGCTAAAGGGCTATATGCTATTATAAACAGGGAAGTTACTTCAACAAATCTACTATAACTTATCTTTTTTTGCAGACGACAGTTTAATCTTTATCAGAGCCAACGCCCAAGATTGCACGACCTTCAAAAGAATTCTATAAGAGTATGAGCAAGCCTCGGGACAAGCTATTAACCTGAATAAATCCAAGTTCATGACTAGCAAGAATATTTGCAGGGCCAAGGCTGAGGAGCTTAGTCGGATCCTTGGTATAGGGAGAACAGATTCGCTAGGTCAATACCTTGGTATGCCTTCCCAAGGGGGTCGGAACATGTGTAGAATCTTCAACCAAGTCGTGGACAAGGTCAGGAAGGTTGTGGCTCGTTGGAAAGAGAACCTTTTTCTCGTAGGGTGGTAAGGAGATCCTGATAAAAGCCATCGCCCAAGCTATCCATACCTTGAACATGAGCTGCTTTAGGCTTCCCCTCAAGATTAGCAACGAGATCAATAAGCTCTGTGCCAGATTCTGGTCGGGTTCCCACGGGGACAAGGACAAAGCGCACTGGCTAAGCTGGAAAAAGATGTGTGTAAATAAAGAATAGGGTGGTTTGGGCTTCAGAGACCTAACCCTCTTTAACCAAGCGCTCATTGCCAAGCAAAGCTGGCGAATTATCAAAAATCCGAAAAGCTTGATGTCTAAAATCCTTAAGGGTAGATACTTTAAGGATGAGAATTTTCTAGAGGCCAAAGCAGGTCCTGGAGCTTCGTTGGTGTGGATAAGCATTGTGTGGGGCAAAGATCTATTCCGAAAGGGATACAGGTGGAGAGTTGGGGACGACAGGTATATTAAAACCGATTCAGACCCTTGGCTTAGTGGGAAAGGTAGTTTGATCCCTCACTTGGTTAACAACGATTTCAAAGGGAGGTTCGTGAGCAACCTCAAAGATGTCTCGGGCAGGTGGAACAGGCACTTGATTCAGAGGATTTCCACCCGATAGATGCAGAAGATATCCTTAGCATTCCCTATGGATCTCCCCTGGCTAAGGATGAGATTATTTGGAGTTTAGACTCCAAGGGGAGATTCTCCATGAAAGTGCTCATAGGCTTGCGATGGAGTTGGAATCTAAATCTAACCCATCCCCCTTTTGCAGCAGTGTGGGGAGAAGAGGTTGGAAGGCTCTATGGAAGACCCCTGTAATTCCTAAAGCTAAGATTACCGTCTGGAGAATCGTCAAAGATATTATCCCAACTAGTTACAATATACGAAAAAAGGGAGTAATTTATAACCCTTTGTGTTTATTCTGTGCTAGCAAAATTGAAACATCAGTGCACGTTATTTGGGACTGTAAGTTCAGTTAGAACGTTTGACTTAATCACATCCCTAATCTGGTTAATTTATTCCTGCTTAACATGGCTGGTTGGAGTCCAGCTGATTATTGGGGATGGATCGTGGGGGAGCTGGGGAACGAAGAGAGAAAGGGAGCTATCCTTCTAATGTGGAAATTATTGTCCTACAGAAAACATGATAAAAGCAGAATTTGAGTCCCTCTTCGATCGAAGAGATCAACAGAGACATTGATAGGGTGTGGGAAGACTTACCGGAGCCCTTACCTTTTGCGGAGCTGAGCAAGAAGATGGAGAACCACATGATTCACCAATCGTGGAAGCCTTTGCCTGCGGATTGCTGGAAATTAAACTCAGACGCCTCAATTAGTGCTTCGGGATCGAGTTGCGATGTAGGCTGGGTGGTTCGTGACTCCTTCAGTTCTCTGATCTGCAGAGGTGCCCTTTCGATCAAGGACATTTGGAGCGTGAATTCGCTTGAAACTCTCGCGATTAGGGAGGGGTTGGAAACTCTGAAGGCCAAGAAAATCTTCCCTCCAAAATCCCTCTGTGTGGAATTGACATCTTCTAAGCGGGGAAGAGGATGA

mRNA sequence

ATGGCAGATCAAGAAGACAAGGCGATACGAGATTATTTCTTGTCTGAGTTACCATTGAACTACTATGGGATAACATATGAGCCAATAGCTACTGAACATTTTGAGCTCGAGGCTAGTCTTATTCAAATGGTTCGAGAGAGTGCTTTCAAAGGACCTCCATCAAAAGATCCACACAGTCATTTGCATTCATTTTTGGATATCTATGGAACGGATCAGAGATTCCAAGCTTCGCCTAAAGCAAGCAATGAAAAATCTCAAGTGGAAGTGGAGTCTCAACCAGAAGAAACAATTCATCAAGAGAAGAAAAATTCTTTGAAGGACATGTTAGGAAAGTTTATTGAAGAGACCAAGAATTTGTCGAATGATGTTCGAGCTTGTCTCTCTCTCAGATTTGCCGCCTCCGTGAGTCCAAATGCATGTCGTCTATCGTCGTTCGTGAATCGCCGCCGGTCAGTCCCATCTCAGATGGTAACCTCCAGGAAGAAGAAGAATGAAATTAATGGTATCTTAGATAATGAAAGGTGTTGGAAGGATAAAGAAAAAGATATTGGAGAGGTGGTTGGCAACTATTTCTCCAAGCTTTTTAGCTCCATTCAGCCCTCCGAATACCTAATGGACAGAGCAGTAGATGGGGTTGAGCATGTCCTTTTAGATCAGCAGAATCAGCAGCTCAGGAAGAAAGCCGTGAAAGAGATGCATCCTACCAATGCCCTCGGGCCCGATGATGCTCATGCCCTCTTTTATAAAAAATTTTGGAATACAGTGGGGATCAAGGCCAAGGCTGAGGAGCTTAGTCGGATCCTTGGTATAGGGAGAACAGATTCGCTAGGTCAATACCTTGGTATGCCTTCCCAAGGGGGTCGGAACATGTGTAGAATCTTCAACCAAGTCGTGGACAAGGGTGGTAAGGAGATCCTGATAAAAGCCATCGCCCAAGCTATCCATACCTTGAACATGAGCTGCTTTAGGCTTCCCCTCAAGATTAGCAACGAGATCAATAAGCTCTGTGCCAGATTCTGGTCGGGTTCCCACGGGGACAAGGACAAAGCGCACTGGCTAAGCTGGAAAAAGATATACTTTAAGGATGAGAATTTTCTAGAGGCCAAAGCAGGTCCTGGAGCTTCGTTGGTGTGGATAAGCATTGTGTGGGGCAAAGATCTATTCCGAAAGGGATACAGGTGGAGAGTTGGGGACGACAGGGAGGTTCGTGAGCAACCTCAAAGATGTCTCGGGCAGGTGGAACAGGCACTTGATTCAGAGGATTTCCACCCGATAGATGCAGAAGATATCCTTAGCATTCCCTATGGATCTCCCCTGGCTAAGGATGAGATTATTTGGAGTTTAGACTCCAAGGGGAGATTCTCCATGAAAGTGCTCATAGGCTTGCGATGGAGTTGGAATCTAAATCTAACCCATCCCCCTTTTGCAGCAGTGTGGGGAGAAGAGAATTTGAGTCCCTCTTCGATCGAAGAGATCAACAGAGACATTGATAGGGTGTGGGAAGACTTACCGGAGCCCTTACCTTTTGCGGAGCTGAGCAAGAAGATGGAGAACCACATGATTCACCAATCGTGGAAGCCTTTGCCTGCGGATTGCTGGAAATTAAACTCAGACGCCTCAATTAGTGCTTCGGGATCGAGTTGCGATGTAGGCTGGGTGGTTCGTGACTCCTTCAGTTCTCTGATCTGCAGAGGTGCCCTTTCGATCAAGGACATTTGGAGCGTGAATTCGCTTGAAACTCTCGCGATTAGGGAGGGGTTGGAAACTCTGAAGGCCAAGAAAATCTTCCCTCCAAAATCCCTCTGTGTGGAATTGACATCTTCTAAGCGGGGAAGAGGATGA

Coding sequence (CDS)

ATGGCAGATCAAGAAGACAAGGCGATACGAGATTATTTCTTGTCTGAGTTACCATTGAACTACTATGGGATAACATATGAGCCAATAGCTACTGAACATTTTGAGCTCGAGGCTAGTCTTATTCAAATGGTTCGAGAGAGTGCTTTCAAAGGACCTCCATCAAAAGATCCACACAGTCATTTGCATTCATTTTTGGATATCTATGGAACGGATCAGAGATTCCAAGCTTCGCCTAAAGCAAGCAATGAAAAATCTCAAGTGGAAGTGGAGTCTCAACCAGAAGAAACAATTCATCAAGAGAAGAAAAATTCTTTGAAGGACATGTTAGGAAAGTTTATTGAAGAGACCAAGAATTTGTCGAATGATGTTCGAGCTTGTCTCTCTCTCAGATTTGCCGCCTCCGTGAGTCCAAATGCATGTCGTCTATCGTCGTTCGTGAATCGCCGCCGGTCAGTCCCATCTCAGATGGTAACCTCCAGGAAGAAGAAGAATGAAATTAATGGTATCTTAGATAATGAAAGGTGTTGGAAGGATAAAGAAAAAGATATTGGAGAGGTGGTTGGCAACTATTTCTCCAAGCTTTTTAGCTCCATTCAGCCCTCCGAATACCTAATGGACAGAGCAGTAGATGGGGTTGAGCATGTCCTTTTAGATCAGCAGAATCAGCAGCTCAGGAAGAAAGCCGTGAAAGAGATGCATCCTACCAATGCCCTCGGGCCCGATGATGCTCATGCCCTCTTTTATAAAAAATTTTGGAATACAGTGGGGATCAAGGCCAAGGCTGAGGAGCTTAGTCGGATCCTTGGTATAGGGAGAACAGATTCGCTAGGTCAATACCTTGGTATGCCTTCCCAAGGGGGTCGGAACATGTGTAGAATCTTCAACCAAGTCGTGGACAAGGGTGGTAAGGAGATCCTGATAAAAGCCATCGCCCAAGCTATCCATACCTTGAACATGAGCTGCTTTAGGCTTCCCCTCAAGATTAGCAACGAGATCAATAAGCTCTGTGCCAGATTCTGGTCGGGTTCCCACGGGGACAAGGACAAAGCGCACTGGCTAAGCTGGAAAAAGATATACTTTAAGGATGAGAATTTTCTAGAGGCCAAAGCAGGTCCTGGAGCTTCGTTGGTGTGGATAAGCATTGTGTGGGGCAAAGATCTATTCCGAAAGGGATACAGGTGGAGAGTTGGGGACGACAGGGAGGTTCGTGAGCAACCTCAAAGATGTCTCGGGCAGGTGGAACAGGCACTTGATTCAGAGGATTTCCACCCGATAGATGCAGAAGATATCCTTAGCATTCCCTATGGATCTCCCCTGGCTAAGGATGAGATTATTTGGAGTTTAGACTCCAAGGGGAGATTCTCCATGAAAGTGCTCATAGGCTTGCGATGGAGTTGGAATCTAAATCTAACCCATCCCCCTTTTGCAGCAGTGTGGGGAGAAGAGAATTTGAGTCCCTCTTCGATCGAAGAGATCAACAGAGACATTGATAGGGTGTGGGAAGACTTACCGGAGCCCTTACCTTTTGCGGAGCTGAGCAAGAAGATGGAGAACCACATGATTCACCAATCGTGGAAGCCTTTGCCTGCGGATTGCTGGAAATTAAACTCAGACGCCTCAATTAGTGCTTCGGGATCGAGTTGCGATGTAGGCTGGGTGGTTCGTGACTCCTTCAGTTCTCTGATCTGCAGAGGTGCCCTTTCGATCAAGGACATTTGGAGCGTGAATTCGCTTGAAACTCTCGCGATTAGGGAGGGGTTGGAAACTCTGAAGGCCAAGAAAATCTTCCCTCCAAAATCCCTCTGTGTGGAATTGACATCTTCTAAGCGGGGAAGAGGATGA

Protein sequence

MADQEDKAIRDYFLSELPLNYYGITYEPIATEHFELEASLIQMVRESAFKGPPSKDPHSHLHSFLDIYGTDQRFQASPKASNEKSQVEVESQPEETIHQEKKNSLKDMLGKFIEETKNLSNDVRACLSLRFAASVSPNACRLSSFVNRRRSVPSQMVTSRKKKNEINGILDNERCWKDKEKDIGEVVGNYFSKLFSSIQPSEYLMDRAVDGVEHVLLDQQNQQLRKKAVKEMHPTNALGPDDAHALFYKKFWNTVGIKAKAEELSRILGIGRTDSLGQYLGMPSQGGRNMCRIFNQVVDKGGKEILIKAIAQAIHTLNMSCFRLPLKISNEINKLCARFWSGSHGDKDKAHWLSWKKIYFKDENFLEAKAGPGASLVWISIVWGKDLFRKGYRWRVGDDREVREQPQRCLGQVEQALDSEDFHPIDAEDILSIPYGSPLAKDEIIWSLDSKGRFSMKVLIGLRWSWNLNLTHPPFAAVWGEENLSPSSIEEINRDIDRVWEDLPEPLPFAELSKKMENHMIHQSWKPLPADCWKLNSDASISASGSSCDVGWVVRDSFSSLICRGALSIKDIWSVNSLETLAIREGLETLKAKKIFPPKSLCVELTSSKRGRG
Homology
BLAST of Lag0001557 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])

HSP 1 Score: 145.2 bits (365), Expect = 1.9e-30
Identity = 121/486 (24.90%), Postives = 178/486 (36.63%), Query Frame = 0

Query: 158 TSRKKKNEINGILDNERCWKDKEKDIGEVVGNYFSKLFSSIQPSEYLMDRAVDGVEHVLL 217
           +SRK+KN I G++D    W D  + + +    YF+ LF++  PSE  ++ A+ G++  + 
Sbjct: 328 SSRKRKNRIWGVMDQHDVWVDDREGVEKQFCEYFASLFTTSSPSEKQIEAALAGLKPRVT 387

Query: 218 DQQNQQLR--------KKAVKEMHPTNALGPDDAHALFYKKFWNTV-------------- 277
            + N QL           A+ +M PT A GPD   A F++K W++V              
Sbjct: 388 LEMNNQLDSPFTEEEVSTALSQMCPTKAPGPDGLPAAFFQKHWDSVKLGVISTCLHILNG 447

Query: 278 -----GIKAKAEELSRILGI---------------------------------------- 337
                 +  +AE+   I GI                                        
Sbjct: 448 REAFSNLLVQAEQQRHIHGIHFGKDAKVSHLLFADDSLIFTRAAVEDCKHLKALFECYGK 507

Query: 338 ------------------GRTDSL---------------GQYLGMPSQGGRNMCRIFNQV 397
                              R D +                +YLG+PS  GR     FN+V
Sbjct: 508 ASGQIFNFEKSSMFFSKGTRNDQITAISEIFQLKVVSRHEKYLGLPSMIGRKTKSFFNEV 567

Query: 398 ---------------VDKGGKEILIKAIAQAIHTLNMSCFRLPLKISNEINKLCARFWSG 457
                             GGKE+LIKA+AQAI T  MS F++PL +  +I K  ARFW G
Sbjct: 568 KLRVLNKISSWQHKFFTSGGKEVLIKAVAQAIPTYAMSVFKIPLGLCEDIQKAMARFWWG 627

BLAST of Lag0001557 vs. NCBI nr
Match: XP_024033484.1 (uncharacterized protein LOC112095607 [Citrus clementina])

HSP 1 Score: 144.1 bits (362), Expect = 4.1e-30
Identity = 117/452 (25.88%), Postives = 176/452 (38.94%), Query Frame = 0

Query: 158 TSRKKKNEINGILDNERCWKDKEKDIGEVVGNYFSKLFSSIQPSEYLMDRAVDGVEHVLL 217
           +SRKKKN I GI +    W DK +++      YF+KLF++ QPS+  +  A++G+   + 
Sbjct: 295 SSRKKKNRIWGIENGSGSWTDKAEEVEYEFCEYFAKLFTTSQPSQEEISAALEGITPRVS 354

Query: 218 DQQNQQLRK--------KAVKEMHPTNALGPDDAHALFYKKFWNTVGIK----------- 277
           +  N+QL +        +A+ +M PT A GPD   A FY+K WN V  K           
Sbjct: 355 EAMNEQLEQPFTLEDITEALAQMSPTKAPGPDGLPAAFYQKHWNVVKKKVITTCLHILNE 414

Query: 278 ------------------------------------------------------------ 337
                                                                       
Sbjct: 415 QGTMAPLNHTYIALVPKAERQKLIHGLSFGKDINISHLLFADDSLIFIRASPMDCGNLKR 474

Query: 338 -------------------------AKAEELSRILGIGRTDSLG---QYLGMPSQGGRNM 397
                                     K EE+S I  I + + +    +YLG+PS  GR  
Sbjct: 475 IFDSYTTASGQLFNLEKSSMFFSKNTKVEEISAIQNIFQLNVVSRHEKYLGLPSMIGRKR 534

Query: 398 CRIFNQV---------------VDKGGKEILIKAIAQAIHTLNMSCFRLPLKISNEINKL 457
              F  V                  GGKE+LIKA+AQA+    MS F++PL + ++I + 
Sbjct: 535 SSFFQDVKLKVMEKISNWQHKFFSSGGKEVLIKAVAQAVPAYAMSVFKVPLGVCDDIQRA 594

BLAST of Lag0001557 vs. NCBI nr
Match: XP_004293042.2 (PREDICTED: uncharacterized protein LOC101293660 [Fragaria vesca subsp. vesca])

HSP 1 Score: 143.3 bits (360), Expect = 7.0e-30
Identity = 131/571 (22.94%), Postives = 222/571 (38.88%), Query Frame = 0

Query: 143 SSFVNRRRSVPSQMVTSRKKKNEINGILDNERCWKDKEKDIGEVVGNYFSKLFSSIQPSE 202
           +SF +R+ S       +RK+KN + G+ ++   W + ++ + +VV +YF  +F++     
Sbjct: 172 TSFFHRKAS-------NRKRKNNLKGLYNDLGEWVEDDEGVEQVVSSYFQSMFTAEDVDI 231

Query: 203 YLMDRAVDGVEHVLLDQQNQQLR--------KKAVKEMHPTNALGPDDAHALFYKKFWNT 262
             M+  ++ ++  +  + N+QLR        K A+ +M+PT +  PD    LF++ +W+T
Sbjct: 232 EAMNTTLNAIQPCISSEMNEQLRAQYSSKKIKCALFQMYPTKSPSPDGMPPLFFQHYWDT 291

Query: 263 VGIKAKA----------------------------------------------------- 322
           +G                                                          
Sbjct: 292 IGDDITVAVQSFLHSGQILKQINFTHICLIPKIQDVLETYGRASGQLVNFQKSFVVFSRN 351

Query: 323 ------EELSRILGIGRTDSLGQYLGMPSQGGRNMCRIFNQVVDK--------------- 382
                 E+ S  +G+   D+  +YLG+P+  GR     F  +  K               
Sbjct: 352 VPEFLQEDFSSFMGVETVDNHEKYLGLPTYVGRKKTATFQCIKKKLGKRILNWQGKLLSG 411

Query: 383 GGKEILIKAIAQAIHTLNMSCFRLPLKISNEINKLCARFWSGSHGDKDKAHWLSWKKIYF 442
            G++ILI+ + Q++    MS F+L  KI  ++ +LCA+FW GS  +K K HW +WK +  
Sbjct: 412 AGRDILIRVVVQSLPNYAMSVFQLTKKICEDLEQLCAKFWWGSTMEKRKIHWKNWKALCN 471

Query: 443 KDENFLEAKAGPGASLVWISIVWGKDLFRKGYRWRVGDD-------------REVREQPQ 502
             E            L + S+V   +       WRV  D             R +  +P 
Sbjct: 472 PKEE---------GGLDFRSLVEFNNAMLAKQAWRVIGDGLTVDVVSDAWIPRTINFKPN 531

Query: 503 RCL----------------GQVEQALDSEDFHPIDAEDILSIPYGSPLAKDEIIWSLDSK 562
                              G    AL S  F   DA  I +IP  S    D I+W L+  
Sbjct: 532 ELTMMPPHITKVHDLISPSGGWNNALISTLFSAEDATAIAAIPLPSHEVTDRIVWHLEKS 591

Query: 563 GRFSMKVLIGLRWSWNLNLTHPPF-----AAVW----------GEENLSPSSIEEINRDI 588
           G FS+K     R+S++ +  H PF      A W          G +NL    +  +   +
Sbjct: 592 GVFSVKT--AYRYSFHHSQVHQPFDLTVGVAFWKKIWKVNIPNGAKNLQSIFVVTV---L 651

BLAST of Lag0001557 vs. NCBI nr
Match: XP_022145148.1 (uncharacterized protein LOC111014662 [Momordica charantia])

HSP 1 Score: 142.1 bits (357), Expect = 1.6e-29
Identity = 74/197 (37.56%), Postives = 100/197 (50.76%), Query Frame = 0

Query: 261 AEELSRILGIGRTDSLGQYLGMPSQGGRNMCRIFNQVVDK---------------GGKEI 320
           A  +   L + RT+ +GQYLG+PSQ  RN C++FN ++++               GGKE+
Sbjct: 20  AANIESELHVTRTNCMGQYLGLPSQTSRNKCQVFNNILNRVWQFLQGWKEKLFSSGGKEV 79

Query: 321 LIKAIAQAIHTLNMSCFRLPLKISNEINKLCARFWSGSHGDKDKAHWLSWKKI------- 380
           LIKA+AQAI   +MSCFR P+ +  EIN L ARFW GS+  + K HW SWK++       
Sbjct: 80  LIKAVAQAIPNYSMSCFRFPMNLCKEINSLYARFWWGSNDREKKIHWPSWKRLCVSKEQG 139

Query: 381 -------------------------------------YFKDENFLEAKAGPGASLVWISI 399
                                                YFK  NF+ A+ G   S VW SI
Sbjct: 140 GLGFKDLCIFNQAMLAKQSWQIIKNPNSLLVRVLRGKYFKHGNFMTAELGSNPSFVWRSI 199

BLAST of Lag0001557 vs. NCBI nr
Match: XP_023892689.1 (uncharacterized protein LOC112004687 [Quercus suber])

HSP 1 Score: 139.8 bits (351), Expect = 7.8e-29
Identity = 106/427 (24.82%), Postives = 167/427 (39.11%), Query Frame = 0

Query: 158 TSRKKKNEINGILDNERCWKDKEKDIGEVVGNYFSKLFSSIQPSEYLMDRAVDGVEHVLL 217
           T R++KN I GI D    W  K + +  +   YF ++FSS  P   + +  +D +  V+ 
Sbjct: 366 TQRRRKNLITGIKDQSNNWYTKPEKVSNIFMTYFQQIFSSSNPE--IAETDLDSIPRVVT 425

Query: 218 DQQNQQLRKK--------AVKEMHPTNALGPDDAHALF-----------------YKK-- 277
            + N+ L +         A+K+M P    GPDD   LF                 Y+K  
Sbjct: 426 VEMNEDLTENFQAWEVELALKQMAPLKTPGPDDDSLLFCRATTHECEKVMDILSSYEKVS 485

Query: 278 -----------FWNTVGIKAKAEELSRILGIGRTDSLGQYLGMPSQGGRNMCRIFNQVVD 337
                      F++         ++   LG+        YLG+P+  GRN    F+Q+  
Sbjct: 486 GQKLNRYKTSLFFSKSTPNEVQRQIMEALGVNDLKQYEDYLGLPAMVGRNKRASFDQLKQ 545

Query: 338 K---------------GGKEILIKAIAQAIHTLNMSCFRLPLKISNEINKLCARFWSGSH 397
           K                G+E+LIK++ QAI T  MSCF+LP+ + +EI  L  +FW G  
Sbjct: 546 KIWKRLQGWEGKLLSQAGREVLIKSVIQAIPTYTMSCFKLPITLGHEIETLIRKFWWGQR 605

Query: 398 GDKDKAHWLSW--------------------------------------------KKIYF 457
           GD+ K HW+ W                                            K  +F
Sbjct: 606 GDRRKTHWVRWDDMCQHKDQGGMGFKDLTMFNEAMLAKLAWRLLHDDDSLFYRVFKARFF 665

BLAST of Lag0001557 vs. ExPASy TrEMBL
Match: A0A2N9GVR0 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31256 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.3e-32
Identity = 112/390 (28.72%), Postives = 168/390 (43.08%), Query Frame = 0

Query: 160 RKKKNEINGI-LDNERCWKDKEKDIGEVVGNYFSKLFSSIQPSEYLMDRAVDGVEHVLLD 219
           RK+ N I  +  D E    D E+ IG     Y+ +LF++    +  +D  +DG++  + +
Sbjct: 534 RKRHNSILAVRSDVEELITDPEQ-IGNQFTAYYQELFTAALLED--VDTVLDGIQSSVTN 593

Query: 220 QQNQQLRKK--------AVKEMHPTNALGPDDAHALFYKKFWNTVGIKAKA--------- 279
           + NQ L           A+K+M P  A GPD    +FY+ +W+ VG    A         
Sbjct: 594 EMNQALVSHFIEDEVILAMKQMAPLKAPGPDGMPPVFYQSYWHVVGKDITAAVLYCLHSG 653

Query: 280 ---------------------EELSRILGIGRTDSLGQYLGMPSQGGRNMCRIFNQ---- 339
                                EEL  ILG+       +YLG+PS  G+     F+Q    
Sbjct: 654 QQLNRAKTTLFFSRNTPQDMQEELKDILGVPSIQQYEKYLGLPSLIGKAKITCFSQIKER 713

Query: 340 -----------VVDKGGKEILIKAIAQAIHTLNMSCFRLPLKISNEINKLCARFWSGSHG 399
                      ++ + G+EILIKA+ QAI T  M+CF+LP+ +  EI  +  RFW G + 
Sbjct: 714 VWSKIKGWKEKILSQAGREILIKAVIQAIPTYTMNCFQLPVTLCKEIEGIIRRFWWGHNK 773

Query: 400 DKDKAHWLSWKKI---------YFKDENFLEAKAGPGASLVWISIVWGKDLFRKGYRWRV 458
           DK K HWLSW+K+         +F + N LEA      S  W SI+  K L   G  WRV
Sbjct: 774 DKRKIHWLSWEKLCNSKVFSAKFFPNGNILEASDKVRGSFAWRSILKAKALINSGLSWRV 833

BLAST of Lag0001557 vs. ExPASy TrEMBL
Match: A0A6J1CV63 (uncharacterized protein LOC111014662 OS=Momordica charantia OX=3673 GN=LOC111014662 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.6e-30
Identity = 74/197 (37.56%), Postives = 100/197 (50.76%), Query Frame = 0

Query: 261 AEELSRILGIGRTDSLGQYLGMPSQGGRNMCRIFNQVVDK---------------GGKEI 320
           A  +   L + RT+ +GQYLG+PSQ  RN C++FN ++++               GGKE+
Sbjct: 20  AANIESELHVTRTNCMGQYLGLPSQTSRNKCQVFNNILNRVWQFLQGWKEKLFSSGGKEV 79

Query: 321 LIKAIAQAIHTLNMSCFRLPLKISNEINKLCARFWSGSHGDKDKAHWLSWKKI------- 380
           LIKA+AQAI   +MSCFR P+ +  EIN L ARFW GS+  + K HW SWK++       
Sbjct: 80  LIKAVAQAIPNYSMSCFRFPMNLCKEINSLYARFWWGSNDREKKIHWPSWKRLCVSKEQG 139

Query: 381 -------------------------------------YFKDENFLEAKAGPGASLVWISI 399
                                                YFK  NF+ A+ G   S VW SI
Sbjct: 140 GLGFKDLCIFNQAMLAKQSWQIIKNPNSLLVRVLRGKYFKHGNFMTAELGSNPSFVWRSI 199

BLAST of Lag0001557 vs. ExPASy TrEMBL
Match: A0A803P8L6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-29
Identity = 111/397 (27.96%), Postives = 163/397 (41.06%), Query Frame = 0

Query: 261 AEELSRILGIGRTDSLGQYLGMPSQGGRNMCRIFNQVVDK---------------GGKEI 320
           AE L+  LG+    +  +YLGMP+  G+N   +F ++ D+                GKEI
Sbjct: 513 AEALAANLGVSLVKTHTKYLGMPTFVGKNKKEVFGKIRDRVEAKLQGWKVGLFSQAGKEI 572

Query: 321 LIKAIAQAIHTLNMSCFRLPLKISNEINKLCARFWSGSHGDKDKAHWLSWKK-------- 380
           LIKAI QA+    MSCFR+   I +EI  + A FW G+   K K HW SW+K        
Sbjct: 573 LIKAIVQALPCYAMSCFRISKGILHEIESMIASFWWGASSKKHKIHWGSWEKMCKLKEQG 632

Query: 381 ------------------------------------IYFKDENFLEAKAGPGASLVWISI 440
                                               +YF + NFLEAK G   S +W  I
Sbjct: 633 GMGFRELESFNQALLAKQGWKILTNPDCLMAKVLKALYFPNNNFLEAKVGHYGSHIWRGI 692

Query: 441 VWGKDLFRKGYRWRVGDDREVR--EQPQRCLGQVEQALDSEDFHPIDAEDILSIPYG--- 500
           VWG++L  KGYRW +G+   +R  E P    G            P      +++P G   
Sbjct: 693 VWGRELLLKGYRWHIGNGLTIRINEDPWLPRGA-----------PFALRSKVNVPEGVTI 752

Query: 501 SPLAKDEIIWSLDS-KGRFSMKVLIGLRWSWNLNLTHPPFAAV-WG---EENLSPSSIEE 560
             L   +  W  D   G F  +    + W   +N        + W        + +S  +
Sbjct: 753 HTLLNHDGSWKCDELTGWFHHE---DIPWVLGINPNREREDIIGWSFTPNGQYTVASGYK 812

Query: 561 INRDIDRVWEDLPEPLPFAELSKKMENHMIHQSWKPLPADCWKLNSDASISASGSSCDVG 589
           +     ++  D   PLP  + S          SW P P+  + +N+DAS+      C +G
Sbjct: 813 LRFSHLQLQTDSTPPLPSMKKSP--------VSWSPPPSGTFMINTDASLVVGQPGCGLG 872

BLAST of Lag0001557 vs. ExPASy TrEMBL
Match: A0A803PM68 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.1e-28
Identity = 92/293 (31.40%), Postives = 124/293 (42.32%), Query Frame = 0

Query: 251 FWNTVGIKAKAEELSRILGIGRTDSLGQYLGMPSQGGRNMCRIFNQVVDK---------- 310
           F  TV    K+ +L+ ++G+   D+ G+YLG+PS  GR   + F  +  K          
Sbjct: 63  FGRTVSDPLKS-QLAALMGVKVVDNYGKYLGLPSFVGRTKKQHFEFIKTKVWNKLKGWKG 122

Query: 311 -----GGKEILIKAIAQAIHTLNMSCFRLPLKISNEINKLCARFWSGSHGDKDKAHWLSW 370
                 GKEILIKAI QAI T  MSCFRLP K  N I+ + ARFW GS     K HW  W
Sbjct: 123 SFFSAAGKEILIKAIVQAIPTYTMSCFRLPKKTINSIHSMAARFWWGSSEKDAKIHWCKW 182

Query: 371 --------------------------------------------KKIYFKDENFLEAKAG 430
                                                       K  YF +   LEAK+G
Sbjct: 183 STLCKHKEQGGLGFRDLGLFNQALLAKQIWRCIRYPNSLCSKVLKASYFPNVGVLEAKSG 242

Query: 431 PGASLVWISIVWGKDLFRKGYRWRVGDDREVR--EQP----------------------- 458
             AS VW S+VWGK + +KGYRWR+G+   VR  E P                       
Sbjct: 243 NHASFVWRSLVWGKKIIQKGYRWRIGNGNSVRVLEDPWLPRPVTFKVYDKPSLPEGMYVV 302

BLAST of Lag0001557 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.6e-27
Identity = 85/281 (30.25%), Postives = 123/281 (43.77%), Query Frame = 0

Query: 264 LSRILGIGRTDSLGQYLGMPSQGGRNMCRIFNQVVDK---------------GGKEILIK 323
           +  IL +   +   QYLG+P+   RN    FN + D+               GGKE+LIK
Sbjct: 528 IQNILSVNMVECQLQYLGLPTFMPRNRRMHFNYIKDRVWKHLQGWKAKLFSIGGKEVLIK 587

Query: 324 AIAQAIHTLNMSCFRLPLKISNEINKLCARFWSGSHGDKDKAHWLSWKKI---------- 383
           A+AQAI    MSCFRLP ++  E + + ARFW GS  +  K HW++W  +          
Sbjct: 588 AVAQAIPCYTMSCFRLPKRLIREFHHITARFWWGSSKEDKKIHWVAWNSLYLPKCEGGMG 647

Query: 384 ----------------------------------YFKDENFLEAKAGPGASLVWISIVWG 443
                                             YFKD +F+EAK     S +W SI+WG
Sbjct: 648 FRDLELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISGNPSYIWRSILWG 707

Query: 444 KDLFRKGYRWRVGD--------DREVREQPQ---------RCLGQVEQALDSE------- 458
           +DL +KG RWR+G+        D  V  QP            + +V   +D E       
Sbjct: 708 RDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGGWQGD 767

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_024037590.11.9e-3024.90uncharacterized protein LOC112097210 [Citrus clementina][more]
XP_024033484.14.1e-3025.88uncharacterized protein LOC112095607 [Citrus clementina][more]
XP_004293042.27.0e-3022.94PREDICTED: uncharacterized protein LOC101293660 [Fragaria vesca subsp. vesca][more]
XP_022145148.11.6e-2937.56uncharacterized protein LOC111014662 [Momordica charantia][more]
XP_023892689.17.8e-2924.82uncharacterized protein LOC112004687 [Quercus suber][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9GVR01.3e-3228.72RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31256 ... [more]
A0A6J1CV637.6e-3037.56uncharacterized protein LOC111014662 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A803P8L61.3e-2927.96Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803PM687.1e-2831.40Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6J1DAR41.6e-2730.25uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..101
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 260..459
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 260..459

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0001557.1Lag0001557.1mRNA