Lag0001541 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0001541
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrotransposon protein
Locationchr4: 32616305 .. 32622611 (-)
RNA-Seq ExpressionLag0001541
SyntenyLag0001541
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTTGCTATTTTTTTTTTCATCGTCTTGTGTTCATCGTTCACCTGTTCTTGGCAACTGATCTGGGATTTGTGTTCTTCCCTTTTTTTTCCTTCGGATCTGAACTGCGTACATCTTCCCGTGACGTCTTCGGGTCTTGGTTGAAATGCATGTCACCTCCTTCTCGTCCCGTGCCCTCTTTCAGGTTTGTTGTAATCCCTTCCACTGGTTCGCATCTACGACTGTCGATCTCTGTTATTTCTGTGTTTTTTATGTGATTTGTGTTTTGTATCCTTCTCGCATCTACGACTGTCGATCTCTGTTATTTCTGTGTTTTTTATGTGATTTGTGTTTTGTATCCTTCTCGTCCCCTGTATGTTCTTCGCATGTTATATATATATATATATATTTTAACGTTGGTTGTTTTGGATCTACGGATCCTGGTTTATTCTTCCGGATCTATGACTGTCGGTATGGATACTATTTCTTCGTTTGTTGCCTCACTTCTGTTCTGACTTCTGTATTCAACCTTTACGCTGTCCACATCTTTCATCACTGATCTTCTGGAATTTTTTTCCTTATTTACAGAAACCCACCCCATGCCGCTTCAGCTTGCCGTGGGTGTCGACGATAGGACTCGGTATCCGCCTGGTAGATTGGAGCAAGGTGAGGGGTGGGACGAAGGTGAGTTGTAACCGGCCGATGATGAAGTGGAATAAGCAACTTGTTTACCTTTTTTTTTTTTTTTTGTTGATTTGGCTTATTGTTTTGTTTTTCTTCTTGTTCTGATTTACTGAGGTTCAATTCGTTCTTGTATACGTTTTCATTTTTGCATACCCCCTCGCGTCTGTGTTTGTTCTTCTTGTTATGTTGCTGTTGTTCAACCCATTTTTCTTGCATATTTTTTATATGTTTTCAATGTAACTCATTTTTTTCTCCTATGCTACCTTCCTGTTTGTCATGTTCTTCCCATCATAATTTGATTTAAAATGTGTTTCACCCCACAATTTCACTTTAATTTCAATTCTTTTGTCCACAATATTTGAATGAATGTTGTCTTCTTCATATTCGTGTGTCTGACTTCCATTTTAATTTTTTTGTTTCTTCATTTCTAGTTCATGTTCTTTTCCAAAATTGAAAAGTTTTCTTAAGTGAACAGAATCATGGTTGACAAAAAATCCACCTGAGGCCGGTTACTATTTTTTAATGTATTGAACTATTTCTTTTCTTTTTTACTTTCTGACTAATCCCATTGTGGTTGAACCAAATTGTTATGAATGGATTGGAAGGAGTCTGATATGGCATTTACGTTCTGTGGTTTAATAAATGAATGCTTATTCTCCCTCTCTTCCTTTTGAACTGTTGGAGTTGGTTGCATTTATGTTGCCTCCAAAATTGCTACCAACTTGCTGACTTCATTTAAAAAAGTCAGACATGACCCATCGTCCACATTTATTTAACGTGGTTTAATTAACCAACCACCCCTTGCATTTAATTCATCCAACCTCCTTCATCAATTTTCTTATTTAAAGAACACCATCCTCTCTTATTTTCTTTGAGGAAAGTCTCCACTGCCTTATACGATCCCCCTCACCGGTGAGTCATTTCCAACTACCATTCTACCTCTTTTTTCTTTTTGTTTTCCTTTTGTTTTTTCTCGTACGTTGTTATGTATAGTTTTTATTTGGTTCACTAACTACACTCTAATCTTATCTTGTGCCGATGAAGACAAGCCGAGACCCGATCTCCACCAATTCCTTTCGTTTCACGCATCCATATCTCATATAACGGTAAGATCTCTTTTTGAAATTTCGTTCGCTGCCTTTGTTCACTTTCTTTCCACTTGTTTCCATTCATACCGTCGTACATTAATAACTTTTGTGCTTTATGTTACATGGTTACAGGTTCGCTTGGAAAACACCGTTATATTTGAGGTTCGTTCTTTCAATTAAAATACACTTATACCGTTGTGTAAAATTTGTATTCTGGATATTTGTGGACATTAGACACTTCATTTGTACTCTAGACATTTCGTTTGTTTGTGGGTTTTTTGGACGTTCAAATATTATTTAACTTGATATGTTTGCCTCATTTCATATCAATTTGTGTGTTATTAATTTTTGTTTTTTTACTTCAAATTTTCAAGAACATTTTGAATAAAGTGTAGAAAAAAAGACCATGTCATGCAGTCAACTTCATTTTTTTTTTTTTTTCATCTGTCCTAATTTGAATGTTGACATATAAATTTTAAATGCCAAACAAAGAAATAATGTGGACCATAAATTTAATGTTAATAATAGTCTGAAAATTGGGATTTCAAGTTTACTCTTAAAGAAATGAAATTTAGAACCAATTTTGGAAAATGACTTTCAAACATATGCTTACATTTGATTTAAGAAGTTAAAAATTTTTTGCCCACTGTCTTAGTATAAGAAAAATGTTTTTAGTGGATAATGTTTCTGGAAGGAGTGAAACAACCCAACAACCATGTTTTTACTCCATTCAAGCGGGAAAAAATTATTTCAGAATAAAAGAAGACAGAGTATTTCATGTTAAGTTGAATGATACAAACATATTGTATGCTTGTTTTTTTAAAAATGGAATTTATGGAAAGGGTTTTTTTTTTATTTTCGTTGAAGCAGTTGCATAACAGTTAATTAGAATTTGTACAGTTTGAATGAAAATCAATGAACTTAAGTACAATTCGTACATTCAATTACAGTTAGTGAATTAAATTTTGTACGTTGAGTTTCAGTTAACAAGTTGAACATGAAAGTAAAATAAATTCCGTTGTTTCACATTTGACCTAATAATTGTGAAATTGAAGCAAACAAAATTTCCTACTTACAGTTAGAATTAAGAAGTTCAAACTTTAATTACAACAGAACAGTAATTTCAATTAGGGTTAAAGAATTTTAAAAGTTAAGTAATCAACACATTCATATGTACTTTCATATTGACAAATATTGTACATAATATTTAAAGTCCCTTTTCACCCTAAACGATACACCCGAAACCATAAACCGTAAACCACTAAACCTTGAACCCTACACCCTGAACATTCACCCCGAACCCTAAACCCTAAACCTATTAGGCAGTAAGGTCCTAAATTCAAGCCACAAAACCTATAAACCATGGACTCTAAACCCTAAACCAGTTAACTTGGTACCCTAAATCACTTAACCTAAACCCTAAACCAGTTAACCACTAGCCCCGTAAAGCATAAACTTTAACCCCTAAACATGCATTAAATTTAGTAAATAGGTGAATGCTTGACTGATTACATTTTGAATAATAGGAGTATGGGGACATCGAAATTCTATGTTGTGTTTGTTGGTCGCAACCCAGGAATTTACACCTCGTGGGTTGATTGCCACAAACAAGTTAACCAGTTTAAGGGAGCACTACACAAGTCGTATCCAACATTTCCAGAAGCAGAGTACGCATTTAGGCAGTACGTTACGGGCACACGTGGCGAAGCAAACCTCGTTGACCAACATGATGCGTGTCGTAACCTTCGTGTAGGGGGGTATGGAACCGTAGGAAAATGTTACAGTATTAGTCGGATGTTTGTAGGGTTCCTGTTCGGAATAATTCTAACATACGTCATCGTTCACTATCTTTAGAATGTTAGTGTATCCCCTTGTAAGATGAGTAATGCTTTGCACTAATTAAAAGTCGGTTTATGTTTTGTCCAGGCTGAAGTAGTACCTCATAATGGATTCCATAAACCCACATGAACTTATTTCCGTACTTTCAATAATGGCTGACTCTCAACGCCAACTATTCAACCTGATTAACTCCTTCATGAACAACCACCCTAGGATAGAAGACCAAACTCCATACCTCAGACACCAGATAAGGCAGTTAGCTTGCTTCCGGTTGATTCATGAAAGTGACCTATGCTGTCGAGAAAGCACCAGGATGGATAGAAGATGTTTTGCCATTCTATGTAGTCTGTTGAGAACGACGTCCGGGTTGGTGGGAACGGAAATCGTAGACGTGGAAGAGATGGTCGCGATGTTCTTGCACATCATTGCTCATGATGTTAAGAATCGAGTCATTAGAAGACAGTTCGCAAGGTCGGGCGAAACCGTTTCTCGACACTTCAACGCGACTTTGAGTGCCGTACTACGATTGTACGACGTTCTACTTAAGAAACCTGAACCGATCACGACTTCTTGCCAAGATGGGAGGTGGAAATGGTTTGAGGTATGGACACTATACGTTTGCACACATCGTTAAGATTTTACAACGTCCTTTTGACATTTGTAATGCGATGTGGAAACAGAATTGTTTAGGTGCATTGGACGGTACGTACGTAAAGGTCCATGTTAGTGCAGTTGATCGACCAAGGTATAGGACGCGAAAGGGTGAGATTGCAACAAATGTATTGGGCGTCGTGTCCCCAAAAGGTGAATTCATTTTTGTTATGCCGGGATGGGAAGGTTCGGCTGCTGATTCTCGTGTACTCAGAGATGCTATATCACGCCGCAATGGACTAATAGTGCCGAAGGGTATGGAACGAAATATGAATGTAAAATAGGATCGATTACGTCATCCTTTGGTATTAAACATCTTTTATGAACAGGTTACTACTACCTCTGTGATGCTGGGTACCCAAACGCAGAGGGTTTCTTGGCACCTTATAGAGGAGAGCGGTACCACTTAACCGAGTGGCGTGGGGGAGGCAATCCACCTACTACACCAAGAGAGTTCTTCAACATGAAGCATTCTTCTGCACGGAATGTTATCGAGAGAGCATTCGGTGCTCTAAAAGGACGGTGGGCGATACTTCGGGGGAAGTCCTACTACCCTGCTCGGACCCAGTGTCGAATCATAACAGCGTGTTGTTTACTCCACAACCTTATCACCCGGGAGATGGGTCTGGATGTTGGATTGGATGAAGGTGATGTTGGTCGATCTGAACCTGTACCTCTAGATGGTGAGAACATAACCTTCATTCAAAGCTCCACTGAATGGACGCAAAAGCGAGATGACCTAGCGAACAGGATGTTCAACACGTGGGGGCAACATAATCCCTGATCCAGTTTCGACATACGACTATCTGCTATGTTGTAATTTATATAGTTTTGACATTTCTTCGGCCGTACATTTTTTCTACAATCTAAACGATGTATTCCATGTAACTCAGTTTAGATTTATGGAAAACAATCATTCATGTCGTTATTCTACATTATGTTTCTAACTTCTTGTCTGCGATTACTTCATAACTAACTATCCTACATTATGTCGCCGATTGTGTGAATTGTTCAGAATACATACTTACAAAATCTGATGACACAATACTTTATCCATGTAGACTAATGGCAGGTGGAGATAAACATCAGAAGCACATCTGGACGAGGCAGGAGGAGGCACGGTTGGTGGAATCCCTCGTGGAGCTTGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAGGGCTGGATACCTAGCCCGACTGAAGCGGATGATAAAAGATAAAATGCCGACCTGCACCATAGAGTCAACGTCCGTAATAGACTGCAAGGTCAGGTCCTTGAAACGGCAATACAGTGCCATCTCGGAGATGCTGGGTCCGGGCTGCAGCGGATTTGGTTGGAATGATGAGTTTAAATGCATCCAGGCTGAGAGGGAGGTATATGATGCATGGGTGAAGGTACGAACATTAGTCATTCATTGATGTAACTCATGTACAATATCGTTGATAAAACACTCTTCAATACATGCAGTCACACTCGGTCGCGAAGGGGCTGCTGAACAAGCCATTTCCTCATTACGAGGATCTTGCTTTCGTTTTCGGCAAAGACAGGGCGAGTGGCGCCGCGTGTAATGTTCCAGCGGAACAGGCAGACAGCACCCACGGGGACGAAGAGGGTGATCAGAATGGCCAGGCGGAACAGGATTGTTACGTCCCCGCCCCTCCAGACATTAATCTGGCAGCGGACATGGACTTCGAGGACGTCCCCATCACACCGACAAGCCGACCAAGCACTGCAGGGTCATCCCAGAGTCGAAAGCGGAGCAGAGCTTCATATGAAGCTGAAGCCCTTGATATTATGAGGCAGTCAGTGACTATGCAGGAGACACAGTTCACTAAGATCGCTGACTGGCCGGAAGCCCAAGACGCGCGAGAGTTCAAGAGGCGGGACACGGTCGGAGAGATGCTCCTGGCGCAGCACGAGCTATCGGACGATGAGAGAGTTGCTCTTATGCGCATCCTTTTCGCCAAACCGAAGATGACAAATATGATGTTGTCTGTGCCACCGAACCTCAGGCTTCGCTTTCTACGAGGACTACTGAACGAACGCCGGTGA

mRNA sequence

ATGGAAGTTTGCTATTTTTTTTTTCATCGTCTTGTGTTCATCGTTCACCTGTTCTTGGCAACTGATCTGGGATTTGTGTTCTTCCCTTTTTTTTCCTTCGGATCTGAACTGCGTACATCTTCCCGTGACGTCTTCGGGTCTTGGTTGAAATGCATGTCACCTCCTTCTCGTCCCGTGCCCTCTTTCAGGTTTGTTGTAATCCCTTCCACTGAAACCCACCCCATGCCGCTTCAGCTTGCCGTGGGTGTCGACGATAGGACTCGGTATCCGCCTGGTAGATTGGAGCAAGGTGAGGGGTGGGACGAAGTTTTTATTTGGTTCACTAACTACACTCTAATCTTATCTTGTGCCGATGAAGACAAGCCGAGACCCGATCTCCACCAATTCCTTTCGTTTCACGCATCCATATCTCATATAACGGTAAGATCTCTTTTTGAAATTTCGTTCGCTTGGAAAACACCGTTATATTTGAGGAGTATGGGGACATCGAAATTCTATGTTGTGTTTGTTGGTCGCAACCCAGGAATTTACACCTCGTGGGTTGATTGCCACAAACAAGTTAACCAGTTTAAGGGAGCACTACACAAGTCGTATCCAACATTTCCAGAAGCAGAGTACGCATTTAGGCAGTACGTTACGGGCACACGTGGCGAAGCAAACCTCGTTGACCAACATGATGCGTGTCGTAACCTTCGTGTAGGGGGGATAGAAGACCAAACTCCATACCTCAGACACCAGATAAGGCAGTTAGCTTGCTTCCGGTTGATTCATGAAAGTGACCTATGCTGTCGAGAAAGCACCAGGATGGATAGAAGATGTTTTGCCATTCTATGTAGTCTGTTGAGAACGACGTCCGGGTTGGTGGGAACGGAAATCGTAGACGTGGAAGAGATGGTCGCGATGTTCTTGCACATCATTGCTCATGATGTTAAGAATCGAGTCATTAGAAGACAGTTCGCAAGGTCGGGCGAAACCGTTTCTCGACACTTCAACGCGACTTTGAGTGCCGTACTACGATTGTACGACGTTCTACTTAAGAAACCTGAACCGATCACGACTTCTTGCCAAGATGGGAGGTGGAAATGGTTTGAGAATTGTTTAGGTGCATTGGACGGTACGTACGTAAAGGTCCATGTTAGTGCAGTTGATCGACCAAGGTATAGGACGCGAAAGGGTGAGATTGCAACAAATGTATTGGGCGTCGTGTCCCCAAAAGGTGAATTCATTTTTGTTATGCCGGGATGGGAAGGTTCGGCTGCTGATTCTCGTGTACTCAGAGATGCTATATCACGCCGCAATGGACTAATAGTGCCGAAGGGTTACTACTACCTCTGTGATGCTGGGTACCCAAACGCAGAGGGTTTCTTGGCACCTTATAGAGGAGAGCGGTACCACTTAACCGAGTGGCGTGGGGGAGGCAATCCACCTACTACACCAAGAGAGTTCTTCAACATGAAGCATTCTTCTGCACGGAATGTTATCGAGAGAGCATTCGGTGCTCTAAAAGGACGGTGGGCGATACTTCGGGGGAAGTCCTACTACCCTGCTCGGACCCAGTGTCGAATCATAACAGCGTGTTGTTTACTCCACAACCTTATCACCCGGGAGATGGGTCTGGATGTTGGATTGGATGAAGGTGATGTTGGTCGATCTGAACCTGTACCTCTAGATGGTGAGAACATAACCTTCATTCAAAGCTCCACTGAATGGACGCAAAAGCGAGATGACCTAGCGAACAGGATGTTCAACACACTAATGGCAGGTGGAGATAAACATCAGAAGCACATCTGGACGAGGCAGGAGGAGGCACGGTTGGTGGAATCCCTCGTGGAGCTTGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAGGGCTGGATACCTAGCCCGACTGAAGCGGATGATAAAAGATAAAATGCCGACCTGCACCATAGAGTCAACGTCCGTAATAGACTGCAAGGTCAGGTCCTTGAAACGGCAATACAGTGCCATCTCGGAGATGCTGGGTCCGGGCTGCAGCGGATTTGGTTGGAATGATGAGTTTAAATGCATCCAGGCTGAGAGGGAGGTATATGATGCATGGGTGAAGTCACACTCGGTCGCGAAGGGGCTGCTGAACAAGCCATTTCCTCATTACGAGGATCTTGCTTTCGTTTTCGGCAAAGACAGGGCGAGTGGCGCCGCGTGTAATGTTCCAGCGGAACAGGCAGACAGCACCCACGGGGACGAAGAGGGTGATCAGAATGGCCAGGCGGAACAGGATTGTTACGTCCCCGCCCCTCCAGACATTAATCTGGCAGCGGACATGGACTTCGAGGACGTCCCCATCACACCGACAAGCCGACCAAGCACTGCAGGGTCATCCCAGAGTCGAAAGCGGAGCAGAGCTTCATATGAAGCTGAAGCCCTTGATATTATGAGGCAGTCAGTGACTATGCAGGAGACACAGTTCACTAAGATCGCTGACTGGCCGGAAGCCCAAGACGCGCGAGAGTTCAAGAGGCGGGACACGGTCGGAGAGATGCTCCTGGCGCAGCACGAGCTATCGGACGATGAGAGAGTTGCTCTTATGCGCATCCTTTTCGCCAAACCGAAGATGACAAATATGATGTTGTCTGTGCCACCGAACCTCAGGCTTCGCTTTCTACGAGGACTACTGAACGAACGCCGGTGA

Coding sequence (CDS)

ATGGAAGTTTGCTATTTTTTTTTTCATCGTCTTGTGTTCATCGTTCACCTGTTCTTGGCAACTGATCTGGGATTTGTGTTCTTCCCTTTTTTTTCCTTCGGATCTGAACTGCGTACATCTTCCCGTGACGTCTTCGGGTCTTGGTTGAAATGCATGTCACCTCCTTCTCGTCCCGTGCCCTCTTTCAGGTTTGTTGTAATCCCTTCCACTGAAACCCACCCCATGCCGCTTCAGCTTGCCGTGGGTGTCGACGATAGGACTCGGTATCCGCCTGGTAGATTGGAGCAAGGTGAGGGGTGGGACGAAGTTTTTATTTGGTTCACTAACTACACTCTAATCTTATCTTGTGCCGATGAAGACAAGCCGAGACCCGATCTCCACCAATTCCTTTCGTTTCACGCATCCATATCTCATATAACGGTAAGATCTCTTTTTGAAATTTCGTTCGCTTGGAAAACACCGTTATATTTGAGGAGTATGGGGACATCGAAATTCTATGTTGTGTTTGTTGGTCGCAACCCAGGAATTTACACCTCGTGGGTTGATTGCCACAAACAAGTTAACCAGTTTAAGGGAGCACTACACAAGTCGTATCCAACATTTCCAGAAGCAGAGTACGCATTTAGGCAGTACGTTACGGGCACACGTGGCGAAGCAAACCTCGTTGACCAACATGATGCGTGTCGTAACCTTCGTGTAGGGGGGATAGAAGACCAAACTCCATACCTCAGACACCAGATAAGGCAGTTAGCTTGCTTCCGGTTGATTCATGAAAGTGACCTATGCTGTCGAGAAAGCACCAGGATGGATAGAAGATGTTTTGCCATTCTATGTAGTCTGTTGAGAACGACGTCCGGGTTGGTGGGAACGGAAATCGTAGACGTGGAAGAGATGGTCGCGATGTTCTTGCACATCATTGCTCATGATGTTAAGAATCGAGTCATTAGAAGACAGTTCGCAAGGTCGGGCGAAACCGTTTCTCGACACTTCAACGCGACTTTGAGTGCCGTACTACGATTGTACGACGTTCTACTTAAGAAACCTGAACCGATCACGACTTCTTGCCAAGATGGGAGGTGGAAATGGTTTGAGAATTGTTTAGGTGCATTGGACGGTACGTACGTAAAGGTCCATGTTAGTGCAGTTGATCGACCAAGGTATAGGACGCGAAAGGGTGAGATTGCAACAAATGTATTGGGCGTCGTGTCCCCAAAAGGTGAATTCATTTTTGTTATGCCGGGATGGGAAGGTTCGGCTGCTGATTCTCGTGTACTCAGAGATGCTATATCACGCCGCAATGGACTAATAGTGCCGAAGGGTTACTACTACCTCTGTGATGCTGGGTACCCAAACGCAGAGGGTTTCTTGGCACCTTATAGAGGAGAGCGGTACCACTTAACCGAGTGGCGTGGGGGAGGCAATCCACCTACTACACCAAGAGAGTTCTTCAACATGAAGCATTCTTCTGCACGGAATGTTATCGAGAGAGCATTCGGTGCTCTAAAAGGACGGTGGGCGATACTTCGGGGGAAGTCCTACTACCCTGCTCGGACCCAGTGTCGAATCATAACAGCGTGTTGTTTACTCCACAACCTTATCACCCGGGAGATGGGTCTGGATGTTGGATTGGATGAAGGTGATGTTGGTCGATCTGAACCTGTACCTCTAGATGGTGAGAACATAACCTTCATTCAAAGCTCCACTGAATGGACGCAAAAGCGAGATGACCTAGCGAACAGGATGTTCAACACACTAATGGCAGGTGGAGATAAACATCAGAAGCACATCTGGACGAGGCAGGAGGAGGCACGGTTGGTGGAATCCCTCGTGGAGCTTGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAGGGCTGGATACCTAGCCCGACTGAAGCGGATGATAAAAGATAAAATGCCGACCTGCACCATAGAGTCAACGTCCGTAATAGACTGCAAGGTCAGGTCCTTGAAACGGCAATACAGTGCCATCTCGGAGATGCTGGGTCCGGGCTGCAGCGGATTTGGTTGGAATGATGAGTTTAAATGCATCCAGGCTGAGAGGGAGGTATATGATGCATGGGTGAAGTCACACTCGGTCGCGAAGGGGCTGCTGAACAAGCCATTTCCTCATTACGAGGATCTTGCTTTCGTTTTCGGCAAAGACAGGGCGAGTGGCGCCGCGTGTAATGTTCCAGCGGAACAGGCAGACAGCACCCACGGGGACGAAGAGGGTGATCAGAATGGCCAGGCGGAACAGGATTGTTACGTCCCCGCCCCTCCAGACATTAATCTGGCAGCGGACATGGACTTCGAGGACGTCCCCATCACACCGACAAGCCGACCAAGCACTGCAGGGTCATCCCAGAGTCGAAAGCGGAGCAGAGCTTCATATGAAGCTGAAGCCCTTGATATTATGAGGCAGTCAGTGACTATGCAGGAGACACAGTTCACTAAGATCGCTGACTGGCCGGAAGCCCAAGACGCGCGAGAGTTCAAGAGGCGGGACACGGTCGGAGAGATGCTCCTGGCGCAGCACGAGCTATCGGACGATGAGAGAGTTGCTCTTATGCGCATCCTTTTCGCCAAACCGAAGATGACAAATATGATGTTGTCTGTGCCACCGAACCTCAGGCTTCGCTTTCTACGAGGACTACTGAACGAACGCCGGTGA

Protein sequence

MEVCYFFFHRLVFIVHLFLATDLGFVFFPFFSFGSELRTSSRDVFGSWLKCMSPPSRPVPSFRFVVIPSTETHPMPLQLAVGVDDRTRYPPGRLEQGEGWDEVFIWFTNYTLILSCADEDKPRPDLHQFLSFHASISHITVRSLFEISFAWKTPLYLRSMGTSKFYVVFVGRNPGIYTSWVDCHKQVNQFKGALHKSYPTFPEAEYAFRQYVTGTRGEANLVDQHDACRNLRVGGIEDQTPYLRHQIRQLACFRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGRWKWFENCLGALDGTYVKVHVSAVDRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAISRRNGLIVPKGYYYLCDAGYPNAEGFLAPYRGERYHLTEWRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRWAILRGKSYYPARTQCRIITACCLLHNLITREMGLDVGLDEGDVGRSEPVPLDGENITFIQSSTEWTQKRDDLANRMFNTLMAGGDKHQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRAGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFGWNDEFKCIQAEREVYDAWVKSHSVAKGLLNKPFPHYEDLAFVFGKDRASGAACNVPAEQADSTHGDEEGDQNGQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPSTAGSSQSRKRSRASYEAEALDIMRQSVTMQETQFTKIADWPEAQDAREFKRRDTVGEMLLAQHELSDDERVALMRILFAKPKMTNMMLSVPPNLRLRFLRGLLNERR
Homology
BLAST of Lag0001541 vs. NCBI nr
Match: KAA0034843.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 669.8 bits (1727), Expect = 3.1e-188
Identity = 357/655 (54.50%), Postives = 435/655 (66.41%), Query Frame = 0

Query: 241 PY-LRHQIRQLACFRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMV 300
           PY  RH+IRQLA FR+IH SDL CR+STRMDRRCFAILC LLRT +GL  TE+VDVEEMV
Sbjct: 38  PYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMV 97

Query: 301 AMFLHIIAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR 360
           AMFLHI+AHDVKNRVI+R+F RSGET+SRHFN  L AV+RL+D LLKKP+P+   C D R
Sbjct: 98  AMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQR 157

Query: 361 WKWFENCLGALDGTYVKVHVSAVDRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSA 420
           W+WFENCLGALDGTY+KV+V A DR RYRTRKGE+ATNVLGV   KG+F++V+ GWEGSA
Sbjct: 158 WRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVYDTKGDFVYVLTGWEGSA 217

Query: 421 ADSRVLRDAISRRNGLIVPKGYYYLCDAGYPNAEGFLAPYRGERYHLTEWRGGGNPPTTP 480
           ADSR+LRDA+SR N L VPKGYYYL DAGYPNAEGFLAPYRG+RYHL EWRG  N P+T 
Sbjct: 218 ADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPKNAPSTS 277

Query: 481 REFFNMKHSSARNVIERAFGALKGRWAILRGKSYYPARTQCRIITACCLLHNLITREM-G 540
           +EFFNMKHSSARNVIERAFG LKGRWAILRGKSY+P   QC  I ACCLLHNLI REM  
Sbjct: 278 KEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYHPVEVQCHTILACCLLHNLINREMTN 337

Query: 541 LDVGLDEGDVGRSEPVPLDGENITFIQSSTEWTQKRDDLANRMFNTLMAGGDKHQKHIWT 600
            D+                 +NI  + SS+                      +  KH WT
Sbjct: 338 FDI----------------EDNIVSMTSSS----------------------RLPKHTWT 397

Query: 601 RQEEARLVESLVELVHEGGWRGDNGTFRAGYLARLKRMIKDKMPTCTIESTSVIDCKVRS 660
           ++EEA     LVELV+ GGWR DNGTFR GYL +L RM+  K+P C I + S ID +++ 
Sbjct: 398 KEEEA----GLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHA-STIDSRIKL 457

Query: 661 LKRQYSAISEMLGPGCSGFGWNDEFKCIQAEREVYDAWVKSHSVAKGLLNKPFPHYEDLA 720
           +KR + A++EM GP CSGFGWNDE KCI AE+EV+D W  SH  AKGLLNK F HY++L+
Sbjct: 458 MKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELS 517

Query: 721 FVFGKDRASGAACNVPAEQADSTHGDEEGDQNGQAEQDCYVPAPPDINLAADMDFEDVPI 780
           +VFGKDRA+G         AD    +  G     A+        P  +L  +M  +D+  
Sbjct: 518 YVFGKDRATGGRAE---SFADIGSNNPPGYDAFAADAVPDTDFSPMYSLGLNMSPDDLME 577

Query: 781 TPTSRPSTAGS-SQSRKRSRASYEAEALDIMRQSVTMQETQFTKIADWPEAQDAREFKRR 840
           T T+R S   + S   KR R  +  ++ DI+R ++     Q  +IA+WP  Q     + R
Sbjct: 578 TRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTR 637

Query: 841 DTVGEMLLAQHELSDDERVALMRILFAKPKMTNMMLSVPPNLRLRFLRGLLNERR 893
             + + L A  EL+  +R  LMRIL          L VP N++  +   +L E R
Sbjct: 638 QEIVQQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYPYCSIILQENR 644

BLAST of Lag0001541 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 669.5 bits (1726), Expect = 4.1e-188
Identity = 348/643 (54.12%), Postives = 439/643 (68.27%), Query Frame = 0

Query: 255 LIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNRV 314
           +IHESDL CR+STRMDRR FAILC LLR  +GL  TEIVDVEEMVAMFLH++AHDVKNRV
Sbjct: 1   MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 315 IRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGRWKWFENCLGALDGTY 374
           I+++F RSGETVSRHFN  L AVLRLY+ L+K+P P+T++C D RWK FENCLGALDGTY
Sbjct: 61  IQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTY 120

Query: 375 VKVHVSAVDRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAISRRNG 434
           +KV+V A DRP +RTRKGEIATNVLGV   KG+F++V+ GWEGSAADSR+LRDAIS+ NG
Sbjct: 121 IKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENG 180

Query: 435 LIVPKGYYYLCDAGYPNAEGFLAPYRGERYHLTEWRGGGNPPTTPREFFNMKHSSARNVI 494
           L VPKGYYYLCDAGYPNAEGFLAPY+G+RYHL EWRG  N PT  +E+FNMKHSSARNVI
Sbjct: 181 LQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVI 240

Query: 495 ERAFGALKGRWAILRGKSYYPARTQCRIITACCLLHNLITREMGLDVGLDEGDVGRSE-P 554
           ERAFG LKGRW ILRGKSYYP + QCR I AC LLHNLI REM     +++ D G S   
Sbjct: 241 ERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDSTYA 300

Query: 555 VPLDGENITFIQSSTEWTQKRDDLANRMF-NTLMAGGDKHQKHIWTRQEEARLVESLVEL 614
                E+I +I+++ EW+Q RDDLA  MF +    GGD                   +EL
Sbjct: 301 TTTASEDIQYIETTNEWSQWRDDLATSMFTDWQFRGGD----------------SCGMEL 360

Query: 615 VHEGGWRGDNGTFRAGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGP 674
           V  GGW+ DNGTFR GYLA+L RM+ +K+  C + +T+VIDC++++LKR + AI+EMLGP
Sbjct: 361 VSMGGWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGP 420

Query: 675 GCSGFGWNDEFKCIQAEREVYDAWVKSHSVAKGLLNKPFPHYEDLAFVFGKDRASGAACN 734
            CSGFGWNDE KCI AE+E++D WV+S   AKGLLN PFP+Y++L +VFG+DRA+G    
Sbjct: 421 ACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRATGRFAE 480

Query: 735 VPAE-QADSTHGDEEGDQNGQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPS---TAG 794
             A+  ++   G  +    G   +D     PP  +   D+  +DV  +  SR S   T  
Sbjct: 481 TFADVGSNEPGGGYDRFDMGDGNED----FPPVYSRGVDILQDDVRASRPSRASEGKTGS 540

Query: 795 SSQSRKR-SRASYEAEALDIMRQSVTMQETQFTKIADWPEAQDAREFKRRDTVGEMLLAQ 854
           S   RKR S+  ++ EA+ +   ++     Q  +IA+WP    A +   R     +L   
Sbjct: 541 SGSKRKRGSQRDFDVEAIHL---ALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREM 600

Query: 855 HELSDDERVALMRILFAKPKMTNMMLSVPPNLRLRFLRGLLNE 891
            EL+  +R  L R L ++       + +P + R  F R LL +
Sbjct: 601 PELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRD 620

BLAST of Lag0001541 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 649.8 bits (1675), Expect = 3.4e-182
Identity = 346/657 (52.66%), Postives = 431/657 (65.60%), Query Frame = 0

Query: 241 PY-LRHQIRQLACFRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMV 300
           PY  RH+IRQLA FR+IH                         T +GL  TE+VDVEEMV
Sbjct: 38  PYETRHRIRQLAYFRMIH------------------------GTIAGLTSTEVVDVEEMV 97

Query: 301 AMFLHIIAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR 360
           AMFLHI+AHDVK+RVI+R+F RSGET+SRHFN  L AV+RL++ LLKKP+P+   C D R
Sbjct: 98  AMFLHILAHDVKSRVIKREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQR 157

Query: 361 WKWFENCLGALDGTYVKVHVSAVDRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSA 420
           W+WFENCLGALDGTY+KV+V A DR RYRTRKGE+ATNVLGV   KG+F++V+ GWEGSA
Sbjct: 158 WRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSA 217

Query: 421 ADSRVLRDAISRRNGLIVPKGYYYLCDAGYPNAEGFLAPYRGERYHLTEWRGGGNPPTTP 480
           ADSR+LRDA+SR N L VPKGYYYL D GYPNAEGFLAPYRG+RYHL EWRG  N P+T 
Sbjct: 218 ADSRILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTS 277

Query: 481 REFFNMKHSSARNVIERAFGALKGRWAILRGKSYYPARTQCRIITACCLLHNLITREM-- 540
           +EFFNMKH SARNVIERAFG LKGRWAILRGKSYYP   QCR I ACCLLHNLI REM  
Sbjct: 278 KEFFNMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTN 337

Query: 541 -GLDVGLDEGDVGRSEPVPLDGENITFIQSSTEWTQKRDDLANRMFNTLMAGGDKHQKHI 600
             ++  +DE D   S       ++I +I++S EW+Q RD+LA      +M    +  KH 
Sbjct: 338 FDIEDNIDEVD---STHATTAADDIHYIETSNEWSQWRDNLAEE----IMTSSSRLPKHT 397

Query: 601 WTRQEEARLVESLVELVHEGGWRGDNGTFRAGYLARLKRMIKDKMPTCTIESTSVIDCKV 660
           WT++EEA LVE LVELV+ GGWR DNGTFR GYL +L RM+  K+P   I + S ID ++
Sbjct: 398 WTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHA-STIDSRI 457

Query: 661 RSLKRQYSAISEMLGPGCSGFGWNDEFKCIQAEREVYDAWVKSHSVAKGLLNKPFPHYED 720
           + +KR + A++EM GP CSGFGWNDE KCI AE+EV+D W  SH  AKGLLNK F HY++
Sbjct: 458 KLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDE 517

Query: 721 LAFVFGKDRASGAACNVPAEQADSTHGDEEGDQNGQAEQDCYVPAPPDINLAADMDFEDV 780
           L++VFGKDRA+G         AD    D  G   G A+       PP  +   +M  +D+
Sbjct: 518 LSYVFGKDRATGGRAE---SFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDL 577

Query: 781 PITPTSRPSTAGS-SQSRKRSRASYEAEALDIMRQSVTMQETQFTKIADWPEAQDAREFK 840
             T T+R S   + S   KR R  +  ++ DI+R ++     Q  +IA+WP  Q     +
Sbjct: 578 METRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQ 637

Query: 841 RRDTVGEMLLAQHELSDDERVALMRILFAKPKMTNMMLSVPPNLRLRFLRGLLNERR 893
            R  +   L A  EL+  +R  LMRIL          L VP +++  +   +L E +
Sbjct: 638 TRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQENQ 657

BLAST of Lag0001541 vs. NCBI nr
Match: KAA0036474.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 607.4 bits (1565), Expect = 1.9e-169
Identity = 293/459 (63.83%), Postives = 354/459 (77.12%), Query Frame = 0

Query: 241 PYLRHQIRQLACFRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVA 300
           P  RH+IR+LA FR+IHESDL CR+STRMDRR FAILC LLR  +GL  TEIVDVEEMVA
Sbjct: 12  PDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVA 71

Query: 301 MFLHIIAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGRW 360
           MFLHI AHDVKNRVI+R+F RSGETVSRHFN  L AVLRLY+ L+K+P P+T++C D RW
Sbjct: 72  MFLHIFAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRW 131

Query: 361 KWFENCLGALDGTYVKVHVSAVDRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSAA 420
           K FENCLGALDGTY+KV+V A DRP +RTRKGEIATNVLGV   KG+F++V+ GW+GSAA
Sbjct: 132 KCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWKGSAA 191

Query: 421 DSRVLRDAISRRNGLIVPKGYYYLCDAGYPNAEGFLAPYRGERYHLTEWRGGGNPPTTPR 480
           DSR+LRDAISR NGL VPKGYYYLCDAGYPNAEGFLAPYRG+RYHL EWRG  N PT  +
Sbjct: 192 DSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTNAK 251

Query: 481 EFFNMKHSSARNVIERAFGALKGRWAILRGKSYYPARTQCRIITACCLLHNLITREMGLD 540
           E+FNMKHSSARNVIERAFG LKGRWAILRGKS          +T C             D
Sbjct: 252 EYFNMKHSSARNVIERAFGVLKGRWAILRGKSE---------MTYC-------------D 311

Query: 541 VGLDEGDVGRSEPVPLDGENITFIQSSTEWTQKRDDLANRMF-NTLMAGGDKHQKHIWTR 600
              DE +   +       E+I +I+++ EW+Q RDDLA  MF +  M+  ++  +H+WTR
Sbjct: 312 DVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFIDWHMSTSNRAPRHVWTR 371

Query: 601 QEEARLVESLVELVHEGGWRGDNGTFRAGYLARLKRMIKDKMPTCTIESTSVIDCKVRSL 660
           +EE  LVE L+ELV  GGW+ DNGTFR+GYLA+L RM+ +K+  C + +T+VIDC++++L
Sbjct: 372 EEEGTLVECLMELVSMGGWKSDNGTFRSGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTL 431

Query: 661 KRQYSAISEMLGPGCSGFGWNDEFKCIQAEREVYDAWVK 699
           KR + AI+EM GP CSGFGWNDE KCI AE+E++D WV+
Sbjct: 432 KRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR 447

BLAST of Lag0001541 vs. NCBI nr
Match: KAA0062747.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22546.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 568.2 bits (1463), Expect = 1.3e-157
Identity = 314/626 (50.16%), Postives = 382/626 (61.02%), Query Frame = 0

Query: 269 MDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNRVIRRQFARSGETVSR 328
           MDRRCFAILC LLRTT+GLV TE++DVEEMVAMFLHI+AH VKNR+I+R+F RSGETVSR
Sbjct: 1   MDRRCFAILCHLLRTTAGLVETEVIDVEEMVAMFLHILAHVVKNRMIQREFVRSGETVSR 60

Query: 329 HFNATLSAVLRLYDVLLKKPEPITTSCQDGRWKWFE---NCLGALDGTYVKVHVSAVDRP 388
           HFN  L A  RL+D LLKKP+P+T SC D RWKWFE   NCL + +GTY+KV+VSA DRP
Sbjct: 61  HFNIVLLAGFRLHDELLKKPQPVTNSCTDPRWKWFEVNTNCLDS-NGTYIKVNVSATDRP 120

Query: 389 RYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAISRRNGLIVPKGYYYLC 448
           RYRTRKGE+ATNVLG    KG+F+FV+ GWEGSAADSR+LRDAISR NGL VPKGYYYLC
Sbjct: 121 RYRTRKGEVATNVLGACDTKGDFVFVLFGWEGSAADSRILRDAISRHNGLKVPKGYYYLC 180

Query: 449 DAGYPNAEGFLAPYRGERYHLTEWRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRW 508
           DAGYPNAEGFLAPYRGERYHL+EWRG  N PTT REFFNMKHSS+RNVIERAFG LKG W
Sbjct: 181 DAGYPNAEGFLAPYRGERYHLSEWRGESNAPTTTREFFNMKHSSSRNVIERAFGLLKGCW 240

Query: 509 AILRGKSYYPARTQCRIITACCLLHNLITREMGLDVGLDEGDVGRSEPVPLDGENITFIQ 568
           AILRGKSYYP   QCR I ACCLLHNLI REM     +D+ D G S      G+ I +I+
Sbjct: 241 AILRGKSYYPVDVQCRTIMACCLLHNLINREMTNSEIIDDLDEGDSTYATTGGDEINYIE 300

Query: 569 SSTEWTQKRDDLANRMFNTLMAGGD---KHQKHIWTRQEEARLVESLVELVHEGGWRGDN 628
           +S EW++ RD LA+ MF+          +H+     ++++  L+ +     H     GD 
Sbjct: 301 ASNEWSEWRDQLAHTMFSDWELQWQVCHEHRNIHGLKRKKQNLLSAWWNWFH----LGDG 360

Query: 629 GTFRAGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFGWNDE 688
           G     +                                      EM GP CSGFGWN+E
Sbjct: 361 GPIMGHFNL------------------------------------EMRGPSCSGFGWNEE 420

Query: 689 FKCIQAEREVYDAWVKSHSVAKGLLNKPFPHYEDLAFVFGKDRASGAACNVPAEQADSTH 748
           F+CI AER+++D+WVKSH   KGLL+K FP+Y+DL++VFGKDRA+GA             
Sbjct: 421 FQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGAR------------ 480

Query: 749 GDEEGDQNGQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPSTAGSSQSRKRSRASYEA 808
             E     G    + +    P      D   ED+P            SQ    S      
Sbjct: 481 -SETFVDVGSNVPNMFNDTIP----LGDSHDEDIPTM---------YSQGVHISPDEMFG 540

Query: 809 EALDIMRQSVTMQETQFTKIADWPEAQDAREFKRRDTVGEMLLAQHELSDDERVALMRIL 868
              +++R  +     Q   IADW + + A E + R  V + L    EL    R  LM+IL
Sbjct: 541 IRAEVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQIL 559

Query: 869 FAKPKMTNMMLSVPPNLRLRFLRGLL 889
           F   +     LS+P  L+L +   LL
Sbjct: 601 FRSLEAIGGFLSIPTELKLEYCNILL 559

BLAST of Lag0001541 vs. ExPASy Swiss-Prot
Match: Q9M2U3 (Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 9.3e-18
Identity = 60/186 (32.26%), Postives = 88/186 (47.31%), Query Frame = 0

Query: 365 NCLGALDGTYVKVHVSAVDRPRYRTRKGE--IATNVLGVVSPKGEFIFVMPGWEGSAADS 424
           NC GA+D T++ +++ AV+        GE   +  +  VV P   F+ V+ GW GS  D 
Sbjct: 182 NCCGAIDITHIVMNLPAVEPSNKVWLDGEKNFSMTLQAVVDPDMRFLDVIAGWPGSLNDD 241

Query: 425 RVLRDA--------ISRRNGLIVPKG------YYYLCDAGYPNAEGFLAPYRGERYHLTE 484
            VL+++          R NG  +P         Y + D+G+P     L PY+G+      
Sbjct: 242 VVLKNSGFYKLVEKGKRLNGEKLPLSERTELREYIVGDSGFPLLPWLLTPYQGK------ 301

Query: 485 WRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRWAILRGKSYYPARTQC-RIITACC 534
                 P + P+  FN +HS A    + A   LK RW I+ G  + P R +  RII  CC
Sbjct: 302 ------PTSLPQTEFNKRHSEATKAAQMALSKLKDRWRIINGVMWMPDRNRLPRIIFVCC 355

BLAST of Lag0001541 vs. ExPASy Swiss-Prot
Match: Q96MB7 (Putative nuclease HARBI1 OS=Homo sapiens OX=9606 GN=HARBI1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.0e-11
Identity = 55/180 (30.56%), Postives = 83/180 (46.11%), Query Frame = 0

Query: 367 LGALDGTYVKVHVSAVDRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVL- 426
           +G +D  +V +     +   Y  RKG  + N L V   +G  + V   W GS  D  VL 
Sbjct: 145 MGVVDCIHVAIKAPNAEDLSYVNRKGLHSLNCLMVCDIRGTLMTVETNWPGSLQDCAVLQ 204

Query: 427 RDAISRRNGLIVPKGYYYLCDAGYPNAEGFLAPYRGERYHLTEWRGGGNPPTTPREF-FN 486
           + ++S +    + K  + L D+ +     FL  +     H+         P TP E+ +N
Sbjct: 205 QSSLSSQFEAGMHKDSWLLGDSSF-----FLRTWLMTPLHI---------PETPAEYRYN 264

Query: 487 MKHSSARNVIERAFGALKGRWAIL---RGKSYYPARTQCRIITACCLLHNLITREMGLDV 542
           M HS+  +VIE+ F  L  R+  L   +G   Y       II ACC+LHN I+ E G+DV
Sbjct: 265 MAHSATHSVIEKTFRTLCSRFRCLDGSKGALQYSPEKSSHIILACCVLHN-ISLEHGMDV 309

BLAST of Lag0001541 vs. ExPASy Swiss-Prot
Match: Q17QR8 (Putative nuclease HARBI1 OS=Bos taurus OX=9913 GN=HARBI1 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.2e-11
Identity = 55/180 (30.56%), Postives = 83/180 (46.11%), Query Frame = 0

Query: 367 LGALDGTYVKVHVSAVDRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVL- 426
           +G +D  +V +     +   Y  RKG  + N L V   +G  + V   W GS  D  VL 
Sbjct: 145 IGVVDCMHVAIKAPNAEDLSYVNRKGLHSLNCLMVCDIRGALMTVETSWPGSLQDCVVLQ 204

Query: 427 RDAISRRNGLIVPKGYYYLCDAGYPNAEGFLAPYRGERYHLTEWRGGGNPPTTPREF-FN 486
           + ++S +    + K  + L D+ +     FL  +     H+         P TP E+ +N
Sbjct: 205 QSSLSSQFEAGMHKESWLLGDSSF-----FLRTWLMTPLHI---------PETPAEYRYN 264

Query: 487 MKHSSARNVIERAFGALKGRWAIL---RGKSYYPARTQCRIITACCLLHNLITREMGLDV 542
           M HS+  +VIE+ F  L  R+  L   +G   Y       II ACC+LHN I+ E G+DV
Sbjct: 265 MAHSATHSVIEKTFRTLCSRFRCLDGSKGALQYSPEKSSHIILACCVLHN-ISLEHGMDV 309

BLAST of Lag0001541 vs. ExPASy Swiss-Prot
Match: B0BN95 (Putative nuclease HARBI1 OS=Rattus norvegicus OX=10116 GN=Harbi1 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.9e-11
Identity = 55/180 (30.56%), Postives = 83/180 (46.11%), Query Frame = 0

Query: 367 LGALDGTYVKVHVSAVDRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVL- 426
           +GA+D  +V +     +   Y  RKG  + N L V   +G  + V   W GS  D  VL 
Sbjct: 145 IGAVDCIHVAIKAPNAEDLSYVNRKGLHSLNCLVVCDIRGALMTVETSWPGSLQDCAVLQ 204

Query: 427 RDAISRRNGLIVPKGYYYLCDAGYPNAEGFLAPYRGERYHLTEWRGGGNPPTTPREF-FN 486
           + ++S +    +PK  + L D+ +     FL  +     H+         P TP E+ +N
Sbjct: 205 QSSLSSQFETGMPKDSWLLGDSSF-----FLHTWLLTPLHI---------PETPAEYRYN 264

Query: 487 MKHSSARNVIERAFGALKGRWAIL---RGKSYYPARTQCRIITACCLLHNLITREMGLDV 542
             HS+  +VIE+    L  R+  L   +G   Y       II ACC+LHN I+ E G+DV
Sbjct: 265 RAHSATHSVIEKTLRTLCCRFRCLDGSKGALQYSPEKSSHIILACCVLHN-ISLEHGMDV 309

BLAST of Lag0001541 vs. ExPASy Swiss-Prot
Match: Q9KEI9 (Ribonuclease H OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=rnhA PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 7.9e-09
Identity = 30/50 (60.00%), Postives = 34/50 (68.00%), Query Frame = 0

Query: 160 MGTSKFYVVFVGRNPGIYTSWVDCHKQVNQFKGALHKSYPTFPEAEYAFR 210
           M  SK+YVV+ GR PGIYTSW  C  QV  + GA  KSYP+  EAE AFR
Sbjct: 1   MAKSKYYVVWNGRKPGIYTSWSACEAQVKGYTGAKFKSYPSKEEAEAAFR 50

BLAST of Lag0001541 vs. ExPASy TrEMBL
Match: A0A5A7SWD8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold515G00010 PE=3 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 1.5e-188
Identity = 357/655 (54.50%), Postives = 435/655 (66.41%), Query Frame = 0

Query: 241 PY-LRHQIRQLACFRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMV 300
           PY  RH+IRQLA FR+IH SDL CR+STRMDRRCFAILC LLRT +GL  TE+VDVEEMV
Sbjct: 38  PYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMV 97

Query: 301 AMFLHIIAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR 360
           AMFLHI+AHDVKNRVI+R+F RSGET+SRHFN  L AV+RL+D LLKKP+P+   C D R
Sbjct: 98  AMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQR 157

Query: 361 WKWFENCLGALDGTYVKVHVSAVDRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSA 420
           W+WFENCLGALDGTY+KV+V A DR RYRTRKGE+ATNVLGV   KG+F++V+ GWEGSA
Sbjct: 158 WRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVYDTKGDFVYVLTGWEGSA 217

Query: 421 ADSRVLRDAISRRNGLIVPKGYYYLCDAGYPNAEGFLAPYRGERYHLTEWRGGGNPPTTP 480
           ADSR+LRDA+SR N L VPKGYYYL DAGYPNAEGFLAPYRG+RYHL EWRG  N P+T 
Sbjct: 218 ADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGFLAPYRGQRYHLQEWRGPKNAPSTS 277

Query: 481 REFFNMKHSSARNVIERAFGALKGRWAILRGKSYYPARTQCRIITACCLLHNLITREM-G 540
           +EFFNMKHSSARNVIERAFG LKGRWAILRGKSY+P   QC  I ACCLLHNLI REM  
Sbjct: 278 KEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYHPVEVQCHTILACCLLHNLINREMTN 337

Query: 541 LDVGLDEGDVGRSEPVPLDGENITFIQSSTEWTQKRDDLANRMFNTLMAGGDKHQKHIWT 600
            D+                 +NI  + SS+                      +  KH WT
Sbjct: 338 FDI----------------EDNIVSMTSSS----------------------RLPKHTWT 397

Query: 601 RQEEARLVESLVELVHEGGWRGDNGTFRAGYLARLKRMIKDKMPTCTIESTSVIDCKVRS 660
           ++EEA     LVELV+ GGWR DNGTFR GYL +L RM+  K+P C I + S ID +++ 
Sbjct: 398 KEEEA----GLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHA-STIDSRIKL 457

Query: 661 LKRQYSAISEMLGPGCSGFGWNDEFKCIQAEREVYDAWVKSHSVAKGLLNKPFPHYEDLA 720
           +KR + A++EM GP CSGFGWNDE KCI AE+EV+D W  SH  AKGLLNK F HY++L+
Sbjct: 458 MKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELS 517

Query: 721 FVFGKDRASGAACNVPAEQADSTHGDEEGDQNGQAEQDCYVPAPPDINLAADMDFEDVPI 780
           +VFGKDRA+G         AD    +  G     A+        P  +L  +M  +D+  
Sbjct: 518 YVFGKDRATGGRAE---SFADIGSNNPPGYDAFAADAVPDTDFSPMYSLGLNMSPDDLME 577

Query: 781 TPTSRPSTAGS-SQSRKRSRASYEAEALDIMRQSVTMQETQFTKIADWPEAQDAREFKRR 840
           T T+R S   + S   KR R  +  ++ DI+R ++     Q  +IA+WP  Q     + R
Sbjct: 578 TRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTR 637

Query: 841 DTVGEMLLAQHELSDDERVALMRILFAKPKMTNMMLSVPPNLRLRFLRGLLNERR 893
             + + L A  EL+  +R  LMRIL          L VP N++  +   +L E R
Sbjct: 638 QEIVQQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYPYCSIILQENR 644

BLAST of Lag0001541 vs. ExPASy TrEMBL
Match: E5GBB2 (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 2.0e-188
Identity = 348/643 (54.12%), Postives = 439/643 (68.27%), Query Frame = 0

Query: 255 LIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNRV 314
           +IHESDL CR+STRMDRR FAILC LLR  +GL  TEIVDVEEMVAMFLH++AHDVKNRV
Sbjct: 1   MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 315 IRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGRWKWFENCLGALDGTY 374
           I+++F RSGETVSRHFN  L AVLRLY+ L+K+P P+T++C D RWK FENCLGALDGTY
Sbjct: 61  IQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTY 120

Query: 375 VKVHVSAVDRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAISRRNG 434
           +KV+V A DRP +RTRKGEIATNVLGV   KG+F++V+ GWEGSAADSR+LRDAIS+ NG
Sbjct: 121 IKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENG 180

Query: 435 LIVPKGYYYLCDAGYPNAEGFLAPYRGERYHLTEWRGGGNPPTTPREFFNMKHSSARNVI 494
           L VPKGYYYLCDAGYPNAEGFLAPY+G+RYHL EWRG  N PT  +E+FNMKHSSARNVI
Sbjct: 181 LQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVI 240

Query: 495 ERAFGALKGRWAILRGKSYYPARTQCRIITACCLLHNLITREMGLDVGLDEGDVGRSE-P 554
           ERAFG LKGRW ILRGKSYYP + QCR I AC LLHNLI REM     +++ D G S   
Sbjct: 241 ERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDSTYA 300

Query: 555 VPLDGENITFIQSSTEWTQKRDDLANRMF-NTLMAGGDKHQKHIWTRQEEARLVESLVEL 614
                E+I +I+++ EW+Q RDDLA  MF +    GGD                   +EL
Sbjct: 301 TTTASEDIQYIETTNEWSQWRDDLATSMFTDWQFRGGD----------------SCGMEL 360

Query: 615 VHEGGWRGDNGTFRAGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGP 674
           V  GGW+ DNGTFR GYLA+L RM+ +K+  C + +T+VIDC++++LKR + AI+EMLGP
Sbjct: 361 VSMGGWKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGP 420

Query: 675 GCSGFGWNDEFKCIQAEREVYDAWVKSHSVAKGLLNKPFPHYEDLAFVFGKDRASGAACN 734
            CSGFGWNDE KCI AE+E++D WV+S   AKGLLN PFP+Y++L +VFG+DRA+G    
Sbjct: 421 ACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRATGRFAE 480

Query: 735 VPAE-QADSTHGDEEGDQNGQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPS---TAG 794
             A+  ++   G  +    G   +D     PP  +   D+  +DV  +  SR S   T  
Sbjct: 481 TFADVGSNEPGGGYDRFDMGDGNED----FPPVYSRGVDILQDDVRASRPSRASEGKTGS 540

Query: 795 SSQSRKR-SRASYEAEALDIMRQSVTMQETQFTKIADWPEAQDAREFKRRDTVGEMLLAQ 854
           S   RKR S+  ++ EA+ +   ++     Q  +IA+WP    A +   R     +L   
Sbjct: 541 SGSKRKRGSQRDFDVEAIHL---ALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREM 600

Query: 855 HELSDDERVALMRILFAKPKMTNMMLSVPPNLRLRFLRGLLNE 891
            EL+  +R  L R L ++       + +P + R  F R LL +
Sbjct: 601 PELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRD 620

BLAST of Lag0001541 vs. ExPASy TrEMBL
Match: E5GCB5 (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 649.8 bits (1675), Expect = 1.6e-182
Identity = 346/657 (52.66%), Postives = 431/657 (65.60%), Query Frame = 0

Query: 241 PY-LRHQIRQLACFRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMV 300
           PY  RH+IRQLA FR+IH                         T +GL  TE+VDVEEMV
Sbjct: 38  PYETRHRIRQLAYFRMIH------------------------GTIAGLTSTEVVDVEEMV 97

Query: 301 AMFLHIIAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGR 360
           AMFLHI+AHDVK+RVI+R+F RSGET+SRHFN  L AV+RL++ LLKKP+P+   C D R
Sbjct: 98  AMFLHILAHDVKSRVIKREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQR 157

Query: 361 WKWFENCLGALDGTYVKVHVSAVDRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSA 420
           W+WFENCLGALDGTY+KV+V A DR RYRTRKGE+ATNVLGV   KG+F++V+ GWEGSA
Sbjct: 158 WRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSA 217

Query: 421 ADSRVLRDAISRRNGLIVPKGYYYLCDAGYPNAEGFLAPYRGERYHLTEWRGGGNPPTTP 480
           ADSR+LRDA+SR N L VPKGYYYL D GYPNAEGFLAPYRG+RYHL EWRG  N P+T 
Sbjct: 218 ADSRILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTS 277

Query: 481 REFFNMKHSSARNVIERAFGALKGRWAILRGKSYYPARTQCRIITACCLLHNLITREM-- 540
           +EFFNMKH SARNVIERAFG LKGRWAILRGKSYYP   QCR I ACCLLHNLI REM  
Sbjct: 278 KEFFNMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTN 337

Query: 541 -GLDVGLDEGDVGRSEPVPLDGENITFIQSSTEWTQKRDDLANRMFNTLMAGGDKHQKHI 600
             ++  +DE D   S       ++I +I++S EW+Q RD+LA      +M    +  KH 
Sbjct: 338 FDIEDNIDEVD---STHATTAADDIHYIETSNEWSQWRDNLAEE----IMTSSSRLPKHT 397

Query: 601 WTRQEEARLVESLVELVHEGGWRGDNGTFRAGYLARLKRMIKDKMPTCTIESTSVIDCKV 660
           WT++EEA LVE LVELV+ GGWR DNGTFR GYL +L RM+  K+P   I + S ID ++
Sbjct: 398 WTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHA-STIDSRI 457

Query: 661 RSLKRQYSAISEMLGPGCSGFGWNDEFKCIQAEREVYDAWVKSHSVAKGLLNKPFPHYED 720
           + +KR + A++EM GP CSGFGWNDE KCI AE+EV+D W  SH  AKGLLNK F HY++
Sbjct: 458 KLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDE 517

Query: 721 LAFVFGKDRASGAACNVPAEQADSTHGDEEGDQNGQAEQDCYVPAPPDINLAADMDFEDV 780
           L++VFGKDRA+G         AD    D  G   G A+       PP  +   +M  +D+
Sbjct: 518 LSYVFGKDRATGGRAE---SFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDL 577

Query: 781 PITPTSRPSTAGS-SQSRKRSRASYEAEALDIMRQSVTMQETQFTKIADWPEAQDAREFK 840
             T T+R S   + S   KR R  +  ++ DI+R ++     Q  +IA+WP  Q     +
Sbjct: 578 METRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQ 637

Query: 841 RRDTVGEMLLAQHELSDDERVALMRILFAKPKMTNMMLSVPPNLRLRFLRGLLNERR 893
            R  +   L A  EL+  +R  LMRIL          L VP +++  +   +L E +
Sbjct: 638 TRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQENQ 657

BLAST of Lag0001541 vs. ExPASy TrEMBL
Match: A0A5A7SYW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold147G00430 PE=3 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 9.3e-170
Identity = 293/459 (63.83%), Postives = 354/459 (77.12%), Query Frame = 0

Query: 241 PYLRHQIRQLACFRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVA 300
           P  RH+IR+LA FR+IHESDL CR+STRMDRR FAILC LLR  +GL  TEIVDVEEMVA
Sbjct: 12  PDTRHRIRELAYFRMIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVA 71

Query: 301 MFLHIIAHDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGRW 360
           MFLHI AHDVKNRVI+R+F RSGETVSRHFN  L AVLRLY+ L+K+P P+T++C D RW
Sbjct: 72  MFLHIFAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRW 131

Query: 361 KWFENCLGALDGTYVKVHVSAVDRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSAA 420
           K FENCLGALDGTY+KV+V A DRP +RTRKGEIATNVLGV   KG+F++V+ GW+GSAA
Sbjct: 132 KCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWKGSAA 191

Query: 421 DSRVLRDAISRRNGLIVPKGYYYLCDAGYPNAEGFLAPYRGERYHLTEWRGGGNPPTTPR 480
           DSR+LRDAISR NGL VPKGYYYLCDAGYPNAEGFLAPYRG+RYHL EWRG  N PT  +
Sbjct: 192 DSRILRDAISRENGLQVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLQEWRGAANAPTNAK 251

Query: 481 EFFNMKHSSARNVIERAFGALKGRWAILRGKSYYPARTQCRIITACCLLHNLITREMGLD 540
           E+FNMKHSSARNVIERAFG LKGRWAILRGKS          +T C             D
Sbjct: 252 EYFNMKHSSARNVIERAFGVLKGRWAILRGKSE---------MTYC-------------D 311

Query: 541 VGLDEGDVGRSEPVPLDGENITFIQSSTEWTQKRDDLANRMF-NTLMAGGDKHQKHIWTR 600
              DE +   +       E+I +I+++ EW+Q RDDLA  MF +  M+  ++  +H+WTR
Sbjct: 312 DVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFIDWHMSTSNRAPRHVWTR 371

Query: 601 QEEARLVESLVELVHEGGWRGDNGTFRAGYLARLKRMIKDKMPTCTIESTSVIDCKVRSL 660
           +EE  LVE L+ELV  GGW+ DNGTFR+GYLA+L RM+ +K+  C + +T+VIDC++++L
Sbjct: 372 EEEGTLVECLMELVSMGGWKSDNGTFRSGYLAQLVRMMAEKL-RCQVRATTVIDCRIKTL 431

Query: 661 KRQYSAISEMLGPGCSGFGWNDEFKCIQAEREVYDAWVK 699
           KR + AI+EM GP CSGFGWNDE KCI AE+E++D WV+
Sbjct: 432 KRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVR 447

BLAST of Lag0001541 vs. ExPASy TrEMBL
Match: A0A5D3DG22 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00290 PE=3 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 6.2e-158
Identity = 314/626 (50.16%), Postives = 382/626 (61.02%), Query Frame = 0

Query: 269 MDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNRVIRRQFARSGETVSR 328
           MDRRCFAILC LLRTT+GLV TE++DVEEMVAMFLHI+AH VKNR+I+R+F RSGETVSR
Sbjct: 1   MDRRCFAILCHLLRTTAGLVETEVIDVEEMVAMFLHILAHVVKNRMIQREFVRSGETVSR 60

Query: 329 HFNATLSAVLRLYDVLLKKPEPITTSCQDGRWKWFE---NCLGALDGTYVKVHVSAVDRP 388
           HFN  L A  RL+D LLKKP+P+T SC D RWKWFE   NCL + +GTY+KV+VSA DRP
Sbjct: 61  HFNIVLLAGFRLHDELLKKPQPVTNSCTDPRWKWFEVNTNCLDS-NGTYIKVNVSATDRP 120

Query: 389 RYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAISRRNGLIVPKGYYYLC 448
           RYRTRKGE+ATNVLG    KG+F+FV+ GWEGSAADSR+LRDAISR NGL VPKGYYYLC
Sbjct: 121 RYRTRKGEVATNVLGACDTKGDFVFVLFGWEGSAADSRILRDAISRHNGLKVPKGYYYLC 180

Query: 449 DAGYPNAEGFLAPYRGERYHLTEWRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRW 508
           DAGYPNAEGFLAPYRGERYHL+EWRG  N PTT REFFNMKHSS+RNVIERAFG LKG W
Sbjct: 181 DAGYPNAEGFLAPYRGERYHLSEWRGESNAPTTTREFFNMKHSSSRNVIERAFGLLKGCW 240

Query: 509 AILRGKSYYPARTQCRIITACCLLHNLITREMGLDVGLDEGDVGRSEPVPLDGENITFIQ 568
           AILRGKSYYP   QCR I ACCLLHNLI REM     +D+ D G S      G+ I +I+
Sbjct: 241 AILRGKSYYPVDVQCRTIMACCLLHNLINREMTNSEIIDDLDEGDSTYATTGGDEINYIE 300

Query: 569 SSTEWTQKRDDLANRMFNTLMAGGD---KHQKHIWTRQEEARLVESLVELVHEGGWRGDN 628
           +S EW++ RD LA+ MF+          +H+     ++++  L+ +     H     GD 
Sbjct: 301 ASNEWSEWRDQLAHTMFSDWELQWQVCHEHRNIHGLKRKKQNLLSAWWNWFH----LGDG 360

Query: 629 GTFRAGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFGWNDE 688
           G     +                                      EM GP CSGFGWN+E
Sbjct: 361 GPIMGHFNL------------------------------------EMRGPSCSGFGWNEE 420

Query: 689 FKCIQAEREVYDAWVKSHSVAKGLLNKPFPHYEDLAFVFGKDRASGAACNVPAEQADSTH 748
           F+CI AER+++D+WVKSH   KGLL+K FP+Y+DL++VFGKDRA+GA             
Sbjct: 421 FQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGAR------------ 480

Query: 749 GDEEGDQNGQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPSTAGSSQSRKRSRASYEA 808
             E     G    + +    P      D   ED+P            SQ    S      
Sbjct: 481 -SETFVDVGSNVPNMFNDTIP----LGDSHDEDIPTM---------YSQGVHISPDEMFG 540

Query: 809 EALDIMRQSVTMQETQFTKIADWPEAQDAREFKRRDTVGEMLLAQHELSDDERVALMRIL 868
              +++R  +     Q   IADW + + A E + R  V + L    EL    R  LM+IL
Sbjct: 541 IRAEVIRSVMEFGNEQLKAIADWTKEKRAMEIEMRAQVVKQLQDIPELRSQYRTKLMQIL 559

Query: 869 FAKPKMTNMMLSVPPNLRLRFLRGLL 889
           F   +     LS+P  L+L +   LL
Sbjct: 601 FRSLEAIGGFLSIPTELKLEYCNILL 559

BLAST of Lag0001541 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 197.2 bits (500), Expect = 5.6e-50
Identity = 113/345 (32.75%), Postives = 177/345 (51.30%), Query Frame = 0

Query: 253 FRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKN 312
           +++++  +  C E+ RMD+  F  LC LL+T   L  T  + +E  +A+FL II H+++ 
Sbjct: 32  YQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRT 91

Query: 313 RVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPEPITTSCQDGRWKWFENCLGALDG 372
           R ++  F  SGET+SRHFN  L+AV+ +     +      T   D    +F++C+G +D 
Sbjct: 92  RAVQELFCYSGETISRHFNNVLNAVIAISKDFFQPNSNSDTLENDD--PYFKDCVGVVDS 151

Query: 373 TYVKVHVSAVDRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAISRR 432
            ++ V V   ++  +R   G +  NVL   S    F +V+ GWEGSA+D +VL  A++RR
Sbjct: 152 FHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRR 211

Query: 433 NGLIVPKGYYYLCDAGYPNAEGFLAPYRGERYHLTEWRGGGNPPTTPREFFNMKHSSARN 492
           N L VP+G YY+ D  YPN  GF+APY G            N     +E FN +H     
Sbjct: 212 NKLQVPQGKYYIVDNKYPNLPGFIAPYHGV---------STNSREEAKEMFNERHKLLHR 271

Query: 493 VIERAFGALKGRWAILRGKSYYPARTQCRIITACCLLHNLITREMGLDVGL------DEG 552
            I R FGALK R+ IL     YP +TQ +++ A C LHN +  E   D+           
Sbjct: 272 AIHRTFGALKERFPILLSAPPYPLQTQVKLVIAACALHNYVRLEKPDDLVFRMFEEETLA 331

Query: 553 DVGRSEPVPLDGENITFI--------QSSTEWTQKRDDLANRMFN 584
           + G    V L+ E +  +        +   +  + RD++A+ ++N
Sbjct: 332 EAGEDREVALEEEQVEIVGQEHGFRPEEVEDSLRLRDEIASELWN 365

BLAST of Lag0001541 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 142.5 bits (358), Expect = 1.6e-33
Identity = 88/265 (33.21%), Postives = 128/265 (48.30%), Query Frame = 0

Query: 253 FRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKN 312
           +R + +    C +  RM   CF  LC++L+T   L  T  + +EE VAMFL I  H+   
Sbjct: 56  WRRLQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVY 115

Query: 313 RVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKKPE-------PITTSCQDGRWKWFEN 372
           R +  +F R+ ETV R F   L+A   L    ++ P        P         W +F  
Sbjct: 116 RDVGLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYFSG 175

Query: 373 CLGALDGTYVKVHVSAVDRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVL 432
            +GA+DGT+V V V    +  Y  R    + N++ +   K  F ++  G  GS  D+ VL
Sbjct: 176 FVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDTAVL 235

Query: 433 RDAISRRNGL-IVPKGYYYLCDAGYPNAEGFLAPYRGE-----RYHLTEWRGGGNPPTTP 492
           + A    +   + P   YYL D+GYPN +G LAPYR       RYH++++  G   P   
Sbjct: 236 QIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQFYYGPR-PRNK 295

Query: 493 REFFNMKHSSARNVIERAFGALKGR 505
            E FN  H+S R+VIER F   K +
Sbjct: 296 HELFNQCHTSLRSVIERTFRIWKNK 319

BLAST of Lag0001541 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 127.1 bits (318), Expect = 7.1e-29
Identity = 67/152 (44.08%), Postives = 87/152 (57.24%), Query Frame = 0

Query: 408 FIFVMPGWEGSAADSRVLRDAISRRNGLIVPKGYYYLCDAGYPNAEGFLAPYRGERYHLT 467
           FI+V+ GWEGSA DSRVL DA+ +          +YL D G+ N   FLAP+RG RYHL 
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRK----------FYLVDCGFANRLNFLAPFRGVRYHLQ 84

Query: 468 EWRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRWAILRGKSYYPARTQCRIITACC 527
           E+ G    P TP E FN++H S RNVIER FG  K R+AI +    +  + Q  ++  C 
Sbjct: 85  EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 144

Query: 528 LLHNLITREMGLD-------VGLDEGDVGRSE 553
            LHN + +E   D       VG +EGDV  +E
Sbjct: 145 ALHNFLRKECRSDEADFPDEVG-NEGDVVNNE 165

BLAST of Lag0001541 vs. TAIR 10
Match: AT5G12010.1 (unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 94.7 bits (234), Expect = 3.9e-19
Identity = 79/301 (26.25%), Postives = 137/301 (45.51%), Query Frame = 0

Query: 252 CFRLIH-ESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEI---VDVEEMVAMFLHIIA 311
           C RL + E D   +++ RM +  F ++C  L +      T +   + V + VA+ +  +A
Sbjct: 165 CSRLDYPEEDF--KKAFRMSKSTFELICDELNSAVAKEDTALRNAIPVRQRVAVCIWRLA 224

Query: 312 HDVKNRVIRRQFARSGETVSRHFNATLSAVLRLYDVLLKK--PEPITTSCQDGRWKW--- 371
                R++ ++F   G  +S      L     + DVL+ K    P   S ++ R ++   
Sbjct: 225 TGEPLRLVSKKF---GLGISTCHKLVLEVCKAIKDVLMPKYLQWPDDESLRNIRERFESV 284

Query: 372 --FENCLGALDGTYV-----KVHVSAVDRPRY--RTRKGEIATNVLGVVSPKGEFIFVMP 431
               N +G++  T++     K+ V++    R+  R +K   +  +  VV+PKG F  +  
Sbjct: 285 SGIPNVVGSMYTTHIPIIAPKISVASYFNKRHTERNQKTSYSITIQAVVNPKGVFTDLCI 344

Query: 432 GWEGSAADSRVLRDAI--SRRNGLIVPKGYYYLCDAGYPNAEGFLAPYRGERYHLTEWRG 491
           GW GS  D +VL  ++   R N   + KG +     G+P  +  L PY  +         
Sbjct: 345 GWPGSMPDDKVLEKSLLYQRANNGGLLKGMWVAGGPGHPLLDWVLVPYTQQNL------- 404

Query: 492 GGNPPTTPREFFNMKHSSARNVIERAFGALKGRWAILRGKSYYPARTQCRIITACCLLHN 533
                T  +  FN K S  + V + AFG LKGRWA L+ ++    +    ++ ACC+LHN
Sbjct: 405 -----TWTQHAFNEKMSEVQGVAKEAFGRLKGRWACLQKRTEVKLQDLPTVLGACCVLHN 448

BLAST of Lag0001541 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 2.0e-15
Identity = 63/213 (29.58%), Postives = 91/213 (42.72%), Query Frame = 0

Query: 256 IHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNRVI 315
           I+ +++ C+   RM    F  LC +L    GL  +  + ++E VA+FL I A +   R I
Sbjct: 17  IYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDI 76

Query: 316 RRQFARSGETVSRHFNATLSAVLRLYDVLLK-----KPEPITTSCQDGRWKWFENCLGAL 375
             +F  + ET+ R F+  L A+ RL    ++     +   I+   QD    W        
Sbjct: 77  ALRFGHAQETIWRKFHDVLKAMERLAVEYIRPRKVEELRAISNRLQDDTRYW-------- 136

Query: 376 DGTYVKVHVSAVDRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAIS 435
                         P      G  + NVL +      F +   G  GS  D+RVL  AIS
Sbjct: 137 --------------PFLMDLLGIASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSAAIS 196

Query: 436 RRNGL-IVPKGYYYLCDAGYPNAEGFLAPYRGE 463
                 + P   YYL D+GY N  G+LAPYR E
Sbjct: 197 DDPLFHVPPDSKYYLVDSGYANKRGYLAPYRRE 207

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0034843.13.1e-18854.50retrotransposon protein [Cucumis melo var. makuwa][more]
ADN33754.14.1e-18854.12retrotransposon protein [Cucumis melo subsp. melo][more]
ADN34114.13.4e-18252.66retrotransposon protein [Cucumis melo subsp. melo][more]
KAA0036474.11.9e-16963.83retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0062747.11.3e-15750.16retrotransposon protein [Cucumis melo var. makuwa] >TYK22546.1 retrotransposon p... [more]
Match NameE-valueIdentityDescription
Q9M2U39.3e-1832.26Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1[more]
Q96MB71.0e-1130.56Putative nuclease HARBI1 OS=Homo sapiens OX=9606 GN=HARBI1 PE=1 SV=1[more]
Q17QR82.2e-1130.56Putative nuclease HARBI1 OS=Bos taurus OX=9913 GN=HARBI1 PE=2 SV=1[more]
B0BN952.9e-1130.56Putative nuclease HARBI1 OS=Rattus norvegicus OX=10116 GN=Harbi1 PE=2 SV=1[more]
Q9KEI97.9e-0960.00Ribonuclease H OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 73... [more]
Match NameE-valueIdentityDescription
A0A5A7SWD81.5e-18854.50Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
E5GBB22.0e-18854.12Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
E5GCB51.6e-18252.66Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
A0A5A7SYW19.3e-17063.83Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DG226.2e-15850.16Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
AT5G41980.15.6e-5032.75CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT1G43722.11.6e-3333.21unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G35695.17.1e-2944.08CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT5G12010.13.9e-1926.25unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, ... [more]
AT5G28730.12.0e-1529.58unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011320Ribonuclease H1, N-terminalPFAMPF01693Cauli_VIcoord: 164..205
e-value: 2.7E-16
score: 59.5
IPR024752Myb/SANT-like domainPFAMPF12776Myb_DNA-bind_3coord: 597..695
e-value: 5.1E-6
score: 27.4
IPR027806Harbinger transposase-derived nuclease domainPFAMPF13359DDE_Tnp_4coord: 370..531
e-value: 3.0E-26
score: 92.0
IPR037056Ribonuclease H1, N-terminal domain superfamilyGENE3D3.40.970.10coord: 161..211
e-value: 5.9E-17
score: 63.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 775..798
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 733..761
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 779..795
NoneNo IPR availablePANTHERPTHR22930:SF211NUCLEASE HARBI1-RELATEDcoord: 256..535
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 256..535
IPR009027Ribosomal protein L9/RNase H1, N-terminalSUPERFAMILY55658L9 N-domain-likecoord: 164..206

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0001541.1Lag0001541.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding