Lag0001495 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0001495
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionauxin-induced protein 15A-like
Locationchr4: 31955092 .. 31955394 (+)
RNA-Seq ExpressionLag0001495
SyntenyLag0001495
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTTCCGTTTGCCTAGTATCGTTCATGCTAAGCAAAGTCTTCGACGATCTACATCAATAGGAAATGGGGCATCCCCAAAAGCTATAGATGTTCCAAAAGGCTACTTCACAGTTTATATTGGGGAGGAACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAATCAGCCTTCATTCCAAGATTTGTTGTGCCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACTATTCCTTGCAGTGAAGAAACTTTTCTCAGTCTCACTCAGAGTTTAAATAACTCATGA

mRNA sequence

ATGGGCTTCCGTTTGCCTAGTATCGTTCATGCTAAGCAAAGTCTTCGACGATCTACATCAATAGGAAATGGGGCATCCCCAAAAGCTATAGATGTTCCAAAAGGCTACTTCACAGTTTATATTGGGGAGGAACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAATCAGCCTTCATTCCAAGATTTGTTGTGCCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACTATTCCTTGCAGTGAAGAAACTTTTCTCAGTCTCACTCAGAGTTTAAATAACTCATGA

Coding sequence (CDS)

ATGGGCTTCCGTTTGCCTAGTATCGTTCATGCTAAGCAAAGTCTTCGACGATCTACATCAATAGGAAATGGGGCATCCCCAAAAGCTATAGATGTTCCAAAAGGCTACTTCACAGTTTATATTGGGGAGGAACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAATCAGCCTTCATTCCAAGATTTGTTGTGCCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACTATTCCTTGCAGTGAAGAAACTTTTCTCAGTCTCACTCAGAGTTTAAATAACTCATGA

Protein sequence

MGFRLPSIVHAKQSLRRSTSIGNGASPKAIDVPKGYFTVYIGEEQKKRFVIPLSYLNQPSFQDLLCQAEEEFGYDHPMGGITIPCSEETFLSLTQSLNNS
Homology
BLAST of Lag0001495 vs. NCBI nr
Match: XP_022135743.1 (auxin-induced protein 15A-like [Momordica charantia])

HSP 1 Score: 192.2 bits (487), Expect = 2.2e-45
Identity = 91/100 (91.00%), Postives = 96/100 (96.00%), Query Frame = 0

Query: 1   MGFRLPSIVHAKQSLRRSTSIGNGASPKAIDVPKGYFTVYIGEEQKKRFVIPLSYLNQPS 60
           MGFRLP IVHAKQSLRRS+S GNGASPKA+DVPKGYFTVY+GE QKKRFVIPLSYLN+PS
Sbjct: 1   MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPS 60

Query: 61  FQDLLCQAEEEFGYDHPMGGITIPCSEETFLSLTQSLNNS 101
           FQDLL QAEEEFGYDHPMGGITIPCSE+TFLSLTQSLNNS
Sbjct: 61  FQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS 100

BLAST of Lag0001495 vs. NCBI nr
Match: XP_022135742.1 (indole-3-acetic acid-induced protein ARG7-like [Momordica charantia])

HSP 1 Score: 188.0 bits (476), Expect = 4.1e-44
Identity = 88/95 (92.63%), Postives = 92/95 (96.84%), Query Frame = 0

Query: 1  MGFRLPSIVHAKQSLRRSTSIGNGASPKAIDVPKGYFTVYIGEEQKKRFVIPLSYLNQPS 60
          MGFRLPSIVHAKQSLRRSTS GNGASPKA+D+PKGYFTVYIGEEQKKRFVIPLSYLNQP 
Sbjct: 1  MGFRLPSIVHAKQSLRRSTSTGNGASPKAVDIPKGYFTVYIGEEQKKRFVIPLSYLNQPL 60

Query: 61 FQDLLCQAEEEFGYDHPMGGITIPCSEETFLSLTQ 96
          FQDLL QAEEEFGYDHPMGGITIPCSE+TFL+LTQ
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGITIPCSEDTFLNLTQ 95

BLAST of Lag0001495 vs. NCBI nr
Match: XP_038887254.1 (auxin-induced protein 15A-like [Benincasa hispida])

HSP 1 Score: 185.3 bits (469), Expect = 2.6e-43
Identity = 88/100 (88.00%), Postives = 95/100 (95.00%), Query Frame = 0

Query: 1   MGFRLPSIVHAKQSLRRSTSIGNGASPKAIDVPKGYFTVYIGEEQKKRFVIPLSYLNQPS 60
           MGFRLP IV AKQSL+RS+S GNGASPKA+DVPKGYFTVY+GEEQKKRFVIPLSYLNQPS
Sbjct: 1   MGFRLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 60

Query: 61  FQDLLCQAEEEFGYDHPMGGITIPCSEETFLSLTQSLNNS 101
           FQDLL QAEEEFGY+HPMGGITIPCSEE FL+LTQSLN+S
Sbjct: 61  FQDLLSQAEEEFGYNHPMGGITIPCSEEIFLNLTQSLNDS 100

BLAST of Lag0001495 vs. NCBI nr
Match: XP_038887257.1 (auxin-induced protein 15A-like [Benincasa hispida])

HSP 1 Score: 183.0 bits (463), Expect = 1.3e-42
Identity = 88/96 (91.67%), Postives = 90/96 (93.75%), Query Frame = 0

Query: 1  MGFRLPSIVHAKQSLRRSTSIGNGASPKAIDVPKGYFTVYIGEEQKKRFVIPLSYLNQPS 60
          MGFRLPSIVHAKQS RRS+S GNGASPKAIDVPKGYFTVY+GE QKKRFVIPLS LNQPS
Sbjct: 1  MGFRLPSIVHAKQSFRRSSSTGNGASPKAIDVPKGYFTVYVGEVQKKRFVIPLSCLNQPS 60

Query: 61 FQDLLCQAEEEFGYDHPMGGITIPCSEETFLSLTQS 97
          FQDLL QAEEEFGYDHPMGGITIPCSEE FLSLTQS
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGITIPCSEEIFLSLTQS 96

BLAST of Lag0001495 vs. NCBI nr
Match: XP_022989148.1 (auxin-induced protein 15A-like [Cucurbita maxima])

HSP 1 Score: 182.6 bits (462), Expect = 1.7e-42
Identity = 85/96 (88.54%), Postives = 92/96 (95.83%), Query Frame = 0

Query: 1   MGFRLPSIVHAKQSLRRSTSIGNGASPKAIDVPKGYFTVYIGEEQKKRFVIPLSYLNQPS 60
           MGFRLP IVHA+QSL+RS+S GNGASPKA+DVPKGYFTVY+GE +K+RFVIPLSYLNQPS
Sbjct: 29  MGFRLPRIVHARQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPS 88

Query: 61  FQDLLCQAEEEFGYDHPMGGITIPCSEETFLSLTQS 97
           FQDLL QAEEEFGYDHPMGGITIPCSEETFLSLTQS
Sbjct: 89  FQDLLSQAEEEFGYDHPMGGITIPCSEETFLSLTQS 124

BLAST of Lag0001495 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 8.5e-29
Identity = 60/99 (60.61%), Postives = 77/99 (77.78%), Query Frame = 0

Query: 1   MGFRLPSIVHAKQSLRRSTSIGNGASPKAIDVPKGYFTVYIGEEQKKRFVIPLSYLNQPS 60
           MGFRLP I       R+++   N AS K+++VPKGY  VY+G++  +RF+IP+SYLNQPS
Sbjct: 1   MGFRLPGI-------RKTSIAANQASSKSVEVPKGYLVVYVGDKM-RRFLIPVSYLNQPS 60

Query: 61  FQDLLCQAEEEFGYDHPMGGITIPCSEETFLSLTQSLNN 100
           FQDLL QAEEEFGYDHPMGG+TIPC E+ FL++T  LN+
Sbjct: 61  FQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLND 91

BLAST of Lag0001495 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-27
Identity = 61/98 (62.24%), Postives = 71/98 (72.45%), Query Frame = 0

Query: 1  MGFRLPSIVHAKQSLRRSTSIGNGASPKAIDVPKGYFTVYIGEEQKKRFVIPLSYLNQPS 60
          MGFRLP I       R++ S  N AS K +D PKGY  VY+GE   KRFVIP+S+LNQP 
Sbjct: 1  MGFRLPGI-------RKTLSARNEASSKVLDAPKGYLAVYVGENM-KRFVIPVSHLNQPL 60

Query: 61 FQDLLCQAEEEFGYDHPMGGITIPCSEETFLSLTQSLN 99
          FQDLL QAEEEFGYDHPMGG+TIPCSE+ F  +T  L+
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLS 90

BLAST of Lag0001495 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-27
Identity = 60/98 (61.22%), Postives = 72/98 (73.47%), Query Frame = 0

Query: 1  MGFRLPSIVHAKQSLRRSTSIGNGASPKAIDVPKGYFTVYIGEEQKKRFVIPLSYLNQPS 60
          MGFRLP I       R+++   N AS KA+DV KGY  VY+GE+  +RFVIP+SYLN+PS
Sbjct: 1  MGFRLPGI-------RKASFSANQASSKAVDVEKGYLAVYVGEKM-RRFVIPVSYLNKPS 60

Query: 61 FQDLLCQAEEEFGYDHPMGGITIPCSEETFLSLTQSLN 99
          FQDLL QAEEEFGY HP GG+TIPCSE+ F  +T  LN
Sbjct: 61 FQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90

BLAST of Lag0001495 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.0e-26
Identity = 58/98 (59.18%), Postives = 73/98 (74.49%), Query Frame = 0

Query: 1  MGFRLPSIVHAKQSLRRSTSIGNGASPKAIDVPKGYFTVYIGEEQKKRFVIPLSYLNQPS 60
          MGFR+  IV      RR++     A+ K +DVPKGY  VY+G++  +RF IP+SYLN+PS
Sbjct: 1  MGFRIAGIV------RRTSFYTTQAASKRVDVPKGYAAVYVGDKM-RRFTIPVSYLNEPS 60

Query: 61 FQDLLCQAEEEFGYDHPMGGITIPCSEETFLSLTQSLN 99
          FQ+LL QAEEEFGYDHPMGG+TIPC EE FL++T  LN
Sbjct: 61 FQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHLN 91

BLAST of Lag0001495 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-26
Identity = 61/98 (62.24%), Postives = 67/98 (68.37%), Query Frame = 0

Query: 1  MGFRLPSIVHAKQSLRRSTSIGNGASPKAIDVPKGYFTVYIGEEQKKRFVIPLSYLNQPS 60
          MGFRLP I  A                KA D PKGY  VY+G E+ KRFVIP+SYLNQPS
Sbjct: 1  MGFRLPGIRKAS---------------KAADAPKGYLAVYVG-EKLKRFVIPVSYLNQPS 60

Query: 61 FQDLLCQAEEEFGYDHPMGGITIPCSEETFLSLTQSLN 99
          FQDLL QAEEEFGYDHPMGG+TIPCSE+ F  +T  LN
Sbjct: 61 FQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCLN 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022135743.12.2e-4591.00auxin-induced protein 15A-like [Momordica charantia][more]
XP_022135742.14.1e-4492.63indole-3-acetic acid-induced protein ARG7-like [Momordica charantia][more]
XP_038887254.12.6e-4388.00auxin-induced protein 15A-like [Benincasa hispida][more]
XP_038887257.11.3e-4291.67auxin-induced protein 15A-like [Benincasa hispida][more]
XP_022989148.11.7e-4288.54auxin-induced protein 15A-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
P330808.5e-2960.61Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1[more]
P322951.2e-2762.24Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ... [more]
P330836.1e-2761.22Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1[more]
P330791.0e-2659.18Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1[more]
P330811.4e-2662.24Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 17..96
e-value: 2.0E-23
score: 82.4
NoneNo IPR availablePANTHERPTHR31929SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATEDcoord: 11..96
NoneNo IPR availablePANTHERPTHR31929:SF69SUBFAMILY NOT NAMEDcoord: 11..96

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0001495.1Lag0001495.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin