Lag0001408 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0001408
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	RNA-binding protein 39
Location	chr4: 30921301 .. 30934118 (+)
RNA-Seq Expression	Lag0001408
Synteny	Lag0001408

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTGATGAGTATGATTATTTAGAGAAAACTGTTGAAAATCCCGAGGGACAGAAAGTGAAGGAAACTGCCAATGGCGGTGATGCAGAAATGAAGTCTGGAGATAAACATCCTAGTCGAAGTTCAAAGTATAAGAGTGATGGTAAAGATGATGGGGAACATAGGTCAAAACGTTCAAAATCAGAAGATGTGTCAAAACGTTCAAAATCAGAAGATGAGTCACGGGATCATGATCGACATAGAGATAGGACTTCTTCCCGGCACCGGTCTAGGTCCAGAGACAGAGACAGAGACCGTGATCGACACAGAAGCAGTAAGGAATATAGGGGAAAAGAGGACAAAGAAAGGAATCGGGAAGAGAGGAGCAGTAAGGACAGAGATGCGGACAGAGATAAAGAACGTGCTCATGATCGTGATAGACGAGGTAGAGATGGTGAAAGGGAAAGGGAAAGAGAACGGTCACGTCGAAGTAGAAGTCGTTCAGAAAGACATCGCAGTGATCGAGATGAAAGCATAAGAGAGAGGAGCCGAGATAATGAATTCAGAGAAAGGGAAAAGGAGAGAGAGTCAAGAGAGCGAGGCAGAGATGGCAGGTATTTTGTGCATTTATATTCTTGGATCATGCTTTTTGGTATTTAGAAGAAGAAAGAACCAAGAGAGTTATTTGCGTTGTTATAATATTTAAATGCGTAAAACCTATAATTCTCATGACGACTCTAATGACAAAACTCTTTTACTGAGTAATTTAATTTGCATGTTATGTTGGTGGATTATTGTTGTGCTGCTTTGCTGCATTTTATGATTTGGATTAGATGTGACTTATGAGCATCCTACATGATGGTCAGTGATGTTCATTCGCCATTAAAAAAATCAACTCTCGTATGATGTTATATGATCATGAAATGATCAGCATGTATGAGTCATATTACAGTCTAATTGCTTCAGGAATAAACTTATTGAATTTGTCTTGTGGGGCATCTATAAGTCTCAGTCGAATGATCCAATCTCTCCTTCTCATTCTTCACATATCATCCATTGTGAATATAGATTTTCATGAGATCCAAACCCATATAACCATATAAATTATGACCTCGTTTCCAAAGGCGAATGAGTAGGTTTAGATATATCCAACGGGAGAACTTTGTCACTGGGAGTTCTTGATGTGGTCTGAGAAAACTTGGGTATCTTCAATTGCAGGCCATCATGATAAGGACATACTTCTCCCTTGTTTCATACTAGCTTATTTTGATTGTTAATCATTCTTTTTTAAAGTGAAGTTGAATTAGATTTGGTATGAAATGCAAAAGCCCACATCATTGATAAAGTTTTGCCCATTTCTTTCCCAATTAAGTTTTATAATGTTGATAAATGGAACCGCCCCTGTGTTGGCATACTTTGGCACAAAAATGTTGGTAAATGGAAATTCATCCACATAGTTTGCAAGTGTCTACAGTTTTCTTGTTTTTCAGAATTTCTCATACAATCTTAGTAATTAGGAAAACTCAGTTGTGCAAGACTGTCTGTTGGCTGTCATTTTAGCAATTTTTATGCCAGAGGAGTTCAATCCACTTCTAGTGTTCCTGCAAATCAATTATGAAGTTTGCTTTGGAGCGTTGTGTGTTTCAGTAATGGAGGTCATAAATAGTGGCGGTGGCATGACATTTTTTCACCATCACCACATTGAAATCCAATACTTAATTTTTTATCTATTCTGTTGCAGAAATGCTGAGGGAGTTGTGGGCTTTTCTTAACAGATGAATTCCATCTTCTGATGCTTGTGGGAATTTCAATATTCAGTGGCTACTGGATTCTCATCATACATGAAATTATAAATTTTTTGCTGATTGTCTAACTATATTTTTGTGGTTTCTAGATTCATGGTTAATGATCTCTTATATTTACTTGTAGAAATAATCGTTTTGCAGAATTTATAGTAACTGAACGTTTTTTTTTTGGCAACCATTGATTGCAATTATGTTCTCTCTGTCCACTGATATTCTCAACACTTTTTTTTTAATTACTACAGTATTTTCAAAGGTGAATTTTAAAAAATCTTGCAGATCTTTGACCATTAGTTTTGAAAATAAGTTGTTCGTTATCACCAATATCACTTATTGAGGTTGAATATTCACTGCTTCCCATGTATACTCCGTTAATGCTTTACATGTAATATCATATAAATATAAGATTGTTATACTTATTTCTTTCACCCTTTGTGTGGTTAATCCTTTCTCTGGAGTATAAACTTTTAACGTGTTCTGTGTTAATGCAATTAGGTTCTTTGCTACTGCATCAATTCAACTTGATGACGCTGTTGTCATTTAAGATTTTGTTATTTATGGAAGGTACAAAATCTGTGGTCAATCCATTGTGTGACAATTTTGGTCTGATTCTTAACTTTCCCATTAAGTGCCACTGTATGTCCCATCTTTCTTTGTCAAATTTTTGGAAAGGGATTTTAAAAATCTCTCTGTTGATTCCAACCTGATTAAAAGGCCTACGGGGCTTTGTAATTTTATGAGCTTTTCTTAAAATGTGGAAAGATCTGTACTCTGGATTATTCTTCTACTGTTGTCATAATAAAGGGTGTAATTGTCTAATTGTAATTTTTTTTTTTTTTTTTTTTTAATTTCAATGTGTGTTTATTTTCACCCTTTATAATGGCGTTGTTAATAGTTTACTTATGACTTAGTTGTGCATCCGAAGCGTGTTGTTATAATTTGGCCAGCTAATAACAAAGGATGTCTGTGACCAATGTTTTTCCCTCCCCACAGAAGATATAAAGAGAAAAAGGAAGAAGCAGCAGAACCAGAAGCAGATCCTGAAAGGGATCAAAGGACTGTATTTGCCTATCAGGTAAACCTTCTATTCGGACATAAGATATTCCAAGTTTTTTATTTTTTGGTCTCTTTTTCTTATTGCATATTTTTAATAATGTCAACTGACATTTTGTGTGATATCTTGGCCAGATAAGTTTGAAGGCAACTGAAAGAGATGTGTACGAATTCTTCTCCAGGGCCGGTAAGGTTGGTATGCACCTCATATCGTTTCTACCACATTTTCAGCTCTTTTCAAACTTCTCTTAAGATTGAATGTTAGTAATTGGTCAAACCAATTTGCTTTTATCGGACTCTATTCTGTTGGAGGTTTTAGCTGCATTTTTTTTTTAAAAATTGAAATTCGTTCATGTCTGCTATATTGCATAAAGTGTAAAACTAATCTAAATTATCCATAGAAATTATACATCATTAACAATCTTTGTGCTAAGTATAATCTCATGTATGGTATAAGAAATTGGGGTCTATGATAAATATGCTCCTATATATTGAATCTTTTGTGATGGGGTGGGAGAAGGCTACGTGACATTGACAATTCAACCTTTGTATTTCTTATTCTTTATATTTTTTAAGCCTCTCCAACATTTATGCTAGGTTCCAGAAAATTATGAGACTTTCTATGAGGTGCAGGGGAAGATGGGGTTCTCGACTTGATAGGTAGAGGTCTGTCTCTAAAGTTACTGAGACCATGGGGACTGGGTTTTGGGAGCTTGGGATCCAACGTGACAGCTTCCCTTAGAGCTTGATTCTTTGTGGAATATGATTTTAGTAAGTAAAATCCTTGGTAAGAAAGCTAGCTTCATCTTTTTCAGGGTTATTTGGAAAACTAAAAACCCAAAGAAAATTAACATCCTTCTTTGTTTTTTATTGAATGGAAATCTTTAACACTTCAGAGTTTTTACAACGGAAATTGCCTCATTTTGCTCTCATGCCATTGGTTGGCTCTCTGTCTTGAGTATGGGGATTTTCTCAACCATCTTTTCTTTGGTTGCTCTTATTCGCTAAATTGTTGATTCAAATTGTTCGAAGTTTACTAGGTTTCTTGGGTTTTTTCATTCTCTTTGAGCCTTTGAGGGATAATTTGTCCTCATCCTCATCTTGGTTTATCCTTGCCGGCAAAGTCTCATCTTTTATGGATTAATGCAATTAAAGCTCTTCTTTCGAAGATTTGGATGGAGAGAAATTCAAGAACTTTTGAGAACAAGAGTCTTCCTTGGTTTGATTGGTTTGATTTAGCTCGTTTAAAAGGTTCTTCTTGGTGTGCTCTTTCCAAGTCTTTTGCTAATTTTTCTTTATTAGATATTTATTTGCATTGGAATGTTTTTTATTTTTTGTATGTCTGTTTTGTTCTCTTTTCTCACCCCTCTGGGGAGTTTGTATTTTAGAACATTCTCTTTTTCATTCACTTAACGAAAAAGTTTTCTCGTGTTTCAAAAAAGATTATAGTGAGTAGCTTTAAAAAAAAAAAAAGATTATAGTGAGTTAATATAAACAATACACTAATGGGTAGGATTCAAGCTTGGTGGGTATTGACACTTCTAGGAACTCGTGGAAAGCTATTCTGTCATGTTTTTCTTGTTTTCTTGTAGTAATCTTTCGGTTGGTGAAGGATCTTTGATTCAATTTTGGGAGGATCTTTCCATTTGGTAATATCTGCCGTTAGTAACTTTTGAACAATATGTTTGGTGCTCTTTTGGTTGTCTAAGTCAAGCCCTTATTGTTCCTCTCTCTCTCTCTAAGAAAACTTGTTCTTAATTTCTTTCTTAATGAAAGTTGTGTTTCTTATATCTATAGAAAAAAAACTCCCTCCCTTTATTTAAAATTTATTTCTAATATCTTCTTAATGAAAGTTGAGTTTCTTATATCTATTAGAAAAACTCTCTCTCTCTCTCTCTATTTAAAATTTATTTATAATTTCTTCTTGATGAAAGTCGAATTTCTTATATCTATAAAGTCATCAGCCTGGCAAATCTTTCTATCTCGTCTTTCTTTCTTTTTTTAGAATTATTTTTAATTTCTTCTCAATGGAAGTTGAGTTTCTTATATCCATGGAAGAAAAAGGTCATCAGCCGGGCAAGTCATTCTAATGTCCAATTTTTCTTTTTGTTTGCTGTTAGTAATTTCCTTCATTATGCATCTTTCTAATTGATGGAATACAACTTACAGGTGCGAGATGTACGCCTCATAATGGATCGTAATTCAAGACGTTCTAAAGGCGTCGGGTAAGATTAATGTGCTTCATGATGTTCGCTTGGGTTAATTGGAGTCTGAACACTTTTGATTCACGTTGCCTCATATTCCATTATTCTGATTATTGTCTTAAATCAAATGCCATTACTTTTTCAAAGTTCAACGACTGGAGCAATACTGTGTAAGACAAAATGTGATAGAACATTGAGTATGTTCTGGAACAAGAAACAGATTTTGTTTGAGCGGCACTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGAGTTAAGAGTGTGTATATAAAAGAAGGGGGAACAATACAGCTCCTAGGCTGGGGGTGGAGAAAACGCCCGCAAATCTCTTGGTTTAAGCTCCACCAAGAAGTAGTGTGTTAAACACTATAACAAAAATGTTGAGGATCCCGCGTTGAAAAAATGAGAGCTCCTAATCTTTATAAACATGAGTTTCTCCTCTCATTGCCAATTAGTTTTGAGATGGAATTCCATGTTTATCTAATATGGTATTAGAGCCCATAAAGTACAAACAAATATTTGGTCCAAGAAAAAAAAAAAGAATCCGACCCAAGAATGGTGAACTCAAAGAGGCGCCATCTTGAGGGACATGTTGAGGATCGCACATTGAAAAGATGAGATCTCACAGTCTTCCTACGATACATGAGTTAGGGACCCCTCTTCTCCAAATTTTTTTTTTGGTTTCTTTCCTTCTATATCAACCAAAGAAGAGCATGCACTGCCCAATTCCAAATTCCACAAAACCCTGGCTTTGCCTTTTAACATGGAGTCTCCAAATGATGTCAGAAACAACTAATCCACCTTTATAGGAAGGAAAAAGTCCATGAATCACCTTTAGAGGATGGCAAAAGTCCATGCCAGATTCAGACAAAATGCAGGACTAGAAGCTATAAGGGAAGAGCAATGGATAAAAAGGTGATTCCAGGTTTCTTCATTCATGTTTTGTTGTATAAACAACATATGAGTGGAGATAAGGTCTATTAGATAACTAATGTCCAATGGGAAAACTTTTTGAGGAGCATCTCAGCGATATTAAGACTTCATTAGAAAAGAGACCATAAGAAGAACTTCATGTAAGGGTATTAGTATGGTATATATGGGGATTAGTATTAGAAAGGTTGTAAGAGTATAATAGTAAATAGTTAGGGAGTCTTGGTTGAGCCTTGGTTATAAATAGGAGAATTGGAGAGGCTTAGAGGTGAGGAGAATTTTGGTAGCGTCTCATTGTGGGACTTGGGAGAGAGTTAGCCCTCTCGAAAGGCTATCGGGTTTATATTGTAATTTCGTTTCGACATTGCAATATAATATATTAGTGTTTGGTGTCTTTTCTTAGTTTGGATACCTAACAAATTGGTATCAGAGCACGTTTGTCCTGGAAGAAGGAATTGGAAATTGCTCGTAGGGTGGAGCTACACTGGGAAGCAATGCAACAAGGGTTCAGGGAAATGCAACAAATTTTGGAAAAAATGCAAAAACGATTCAAGTAATATGATCGCCAAAAGATGAAGAGGGAAAAAAAGCGTAAAGAAGAGAAACAGATCTAGGAAGGATCCTAGATGGAGTATGATGGCAAAGGCATTGGATTGGTTTGGAGCTATTTATAATGAGAACTCCAAAAAGGAAAAACAGAAGGATTCTTGTGTGAAGAAGAGAAATGTTAGGGTTTTGTGGAATTTCATAGGTAAACTATGAGAAAGTTTGTATTCTAAATGAAAGTGTGGTGTCTTATAAAAAAAAAAGGTAAACTATGAGAAAGACATCATTTTTGGAATAGGCTAGGGCTTTTATAGTTTTCTATTAAGACAATGAGGTGTCATGTGAGAGTCTTAAGAGCTTGAGGAAAAGAGGATTAGTAACTTGAAAAAAGAGATATTATAGAAAATTTATTCAGTTGTGTTGATTCTCCAAGAGAGGAAGCTAGAACTTGGAAGTAGTAGATAAAGGGATGGTTACGTTTAAAGAAATTCAAACAAGATGGATGGAAATTTCTTGAGTCTTGTGGCTCTTCTGTGTCTTAGATGTTGTGAGAAAGGCATTCACATTCAGTTGAGTTATTGAGGTATCCTTATAATATGGCTCATTGGGTTCAAGCTCTCGAGAATGTATGGTCTTTCTTAATTCTTTTCTTACCATGATAGAAGGTCTTTTTTGGGGTGGATAATAAGGTGTTGGTGTATAAGGGAGACTTCTACATCCCAAGATGGTCATTGGAGAAATCTCTAGAGGTGAAAAGGATGAGAGTTATGAAGAGGTTCAACACGAGTCTTCCGACCATAGGTAAACCATTATAGAATGAACAACTTGTGCTCTTTTATGAAGAAAATTAGTCCAATCTTTACTACACGGATTTTTGGTATCCCAAGGTTGGATGAGTTGATTCCCTTTGGGTCTAATCAGAGGGTAAATATTGATCCCGCAACCTTGATCACCTCTTGTCTTGTCAGATGTGCTTCCCTTTGCCTTTCAATTGGCACCTTCTTTCCACGTTACTTTTTCAATAAAAAAAATCCTCAAGATGCAATTGACTATGGAATTTAATTTATTTTTCCAATGAGAAATGTTAATCATTCCATTGATAAGATGAAATAATTCAAAATATGGGGGGAAATTGATCCCATGCTGAGGGAGGCTACAAAAAGCACCTCTAATTGGCCAAAAGAGAAGATAAACTTAGCTATCTACTTTGATCCCCTGATCCCATCCTGTGGAAATTTTGAACATCCACTTTGATGCCACGATCTTCTTCAATGTTTTCCTATTTTCTTTCATATAAAGCTTGAGCACACGCACAAGTTCCTATTGAAAGGGTAGTAAGTAGCCTGGAATTTGAATCTTCGGTTTATAGTAGTCACCTGTTCGGGGGGAGTTGGAAGTTGATGTTTTATGATGAGTGAGGAAAATTATATATAGATTTTAGGTGATCACTTCATATGATTTGATGTAATAGCCATCAGCATTTTGTGTGGCCTGTTTACAATAGTTCGATTCTGTGAGAATTTGAAGCAAAACGTGACTGTTTCAGAATCAAATTGGTCTCTTATGAAAAGAACAGCCTTTGGCTTGTTGTATGTAAATCTAGTTTATTCTTTCTTTTCCTTGGATTTAATATCGTCCCTATATGTGCAGGTATGTTGAATTTGTAGATGCTATGTCTGTGCCCATGGCTATAGCACTTTCAGGCCAGCTCTTGCTTAGTCAACCTGTGATGGTAAAGCCGTCTGAAGCTGAGAAGAACCAGGTGCAATCAACTTCTGCTGCTGGTGGATCAGGTGGAGTAATGGGCCCCTACTCTGGTGGTGCCAGAAGGTTATATGTTGGCAATCTGCACCCCAACATAACAGAAGATAACCTTCGTCAGGTTTGTAAATGAATGTCATGGGATATAATACATATATTACACAGTACTAGTATTTCTTAGTGGCATATATTTCTAGAATCAACTCTGTTACATGCAAATACCCTGTTCTGTGAAATCTTTCAGATTTATTTTTTGTCTGCTAAAAATTGTCCTTGTAATATTTTGTATTGGTTCCTTGCTTGAATAAGATGAGTGCCTTTCCTCTACCTCCAGGTTTTTGGAGCTTTTGGCACTGTGGAACTGGTTCAGATGCCCCTTGATGAAACTGGGCACTGCAAGGGTTTTGGTTTTGTTCAGGTAAATAAATAAATAAATAAATAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTAGAAAATATTTTATTTTTTGAGAAAGGCGCAGGAATGTTAGGGCATAAGCTAATCAAATCTGTTTGATGCAGTTCACACGTCTTGAAGATGCTAAAAATGCACTGAGTTTGAATGGACAACTTGAGATTGCTGGTCGAACGATAAAGGTGATGCATATTTATCATGTTTTCACATGCATGTATTCTTATGTGCAATTTTTTTTGCTAGCATGCTTGGTATGTTCTTTTTTGTTGCGTTGAATAGCAGTCAAATGCTAATCCCATATACTCTACTGCATTAGTTGTGAGAATCTTCTTCTCATTTCTAAGGATTGGGATTTTAAATTGTGTGAATGTCAATGTCAAGGGATAGACTTAAAAAAATTTACTTATAATCTTTTCATGGCAAGAGGAGCGTAAATTATTGTCATTCTTTGATGCTTTTTACATGCCCTTTCAGAATTGTGGGCCTTTCATCTAAGGGTTAGGTTGTGGCATCTCATGGGTGATAGACTAGGGGGAGGTTTTGGAGGTCCTGATCACTTCAGTTTCGAATGTTGCAAGACGCTTGAGCCTGATGGCTTTCTTTAAGGAATGATGAGAAGTCATTAAGTTAGATTGCTCAAGGTGTTCAATGAGTTTTCGCAAAGGGTATAATTTTATGCTTCGATGAATGGAGGCTTAGATTGCTCAAGGTGTTCGATGAGTTCTCTTTTATTGGTCAATAAGGGCCATGTGAAAAGTAAAAGGACTTAGAGGGACTGTGTTCAATCCGTGATGGCCACCTACTTAGGATTTAATATCTTGTGTTTTTTGGCAGCCAAATGTAGTAGGGTCAGGCGGTTGTCCCATGAGATTAGTCGAGGTGAGTGCAAGCTGGTCCAAACACTCATGGATATCATGTTTTTTTTTTCCTTTTTAACTTTTATTTGTTTTTTTTTTTTGAAAAAACTTTTATTTGTTTTTTATTACAAAGAAGAACTTGTAATTTTTCCCATTTTTGTGGTTTTTTTTTTGTTTGTTTTCCGCCTATGTTTTGTATGGTTGGTTTCTCTTTGTATTTTCACTCTTTTTAATGCAATAAGATTTTAATTAAAAATGTGGAATAGGGAGAGTCAATCTTTAACAGAAAAGATCATGATAAATTTTCCTTTTCGAGATAAGGGGAGGAGTCTTGTTGCAGGATTTTTGTTTTGCTATTCTACTGGGAGTGTGACTCAAGAGGAATAGTAGGATTACTGGGAGTGTGACTCAAGAGGAATAGTAGGATTTTAGAGAGGTAGTGGGATTTAGAGGAGGTGTGGGAGGTGGTGAGGTTTAATGTGTCTTTATGGGTGTTCGTTTATCAGATTTTTTGTAATTACTCGCTTGGTTGTATTCGTTTGGATTGGAATTCTTTTCTATAGTTGAGGATTTCTTTTGTGGGCTTGTTTTTCATATGTCCGTGTACATTCTTTCATTTCTCTCAACAAAAGCTGGGTTTCTTATCAAAATTAGAAATGTGGGGTCATTGGTGATTAGCCTAGAAAAGGGGATTAATACATGACAATAAACAAATATTGTAGATTATCTGAATGAGCAATAATGTAGAGTAATTAGAGGGCTTTAGATCTGATTATAGACGAGTTGATAGCATGTGGAAAGCAACATTTAGTATTCTAATACAAGAAATAGTATTTCTCGTTTTTTTTTTTTTTTGTTGATAAAGAACCGAGCTTTCATTGAGAATAAATGAAAGAATCCAAGGGCATCCAAAAAACCAAGCCCCAATCATACCTAACGGGTAATTACTAGTATTTCTCGTTGACTTTTTTTTGAAAAAAGAAACGAACTTTTCATTGATGAAATGAAAAGAGGCTATTGCTCAAAAGATACAAACTCCACGAAGGAGTGAAAAAAAACAAATAAAAAAGCAACAATAAGAATGATACAAGAGAGATAAAAGCATTCCAATTAATATTTCTCGTTGACTGCAAGAAATAATATTGTTGAAAGGGTAAATTAACAAACAGAGAGACAACTGGAAAGCTAGTAAGAATATGGCGAGATTCCCGTTGAATGCTCTTTTCACTAAACTGTAGTATTATGATAAATACTACTCAAGTACAGTTTATTTTCTGGCTGGAATAATATCACAATTTTTTTATATCTCCTTATACAGGTGTCCACAGTCACAGATCAGCCTGGACTGCAAGATATTGGAGCAAGTACTGGTGACCTTGACGATGAAGATGGAGTTGGCTTGGTACATAAGTTTTCTCTCTCTGTTCCTTTCTGCATCCCTAATTAATGTAGCAAAGTTATACTGCATCAATAATAAAACAAAATCACCAAGAAAGTTGAGAGAGTTGGGAATTTGTGTTGTCAAGTTGTAATAGTTCCTGAGCCATTGCTTCTTTTATTGTTTGGAAGATTACACTCGTATTTTATTTCCTTATTGTTCGTTCTTGCTGCATTTGTAATGTTCAATCTACCTGGTTTCTTGGATATGATCCATTGGCAAGTATGCTTCCCAGCTCTTTGTTTCTCCTTCATTTTATTTATTTTAGTCCATTATTTGAATTTGGTCCATTGTGATACTAGGGATATCACCATTAGAGAATCCAGATTGCTCTTTCTACCTAGATATGTTTATTTTTGTGTTTTTGTTTTTAATACAAAATTCTTCTTAAAGGACATAGATTTTTTTTTTGAATTGCCCAATTAGAGTACATGAAGGTATAAGTAATATCAAAATCTTTGAAATTTCATATGATTAATGAAATGTCATCCCCCCCCCCCCCAAAAAAAAATAAATAAATAATAATAATATCAGAATCTAAAAGCTTAACATTCTTAGACCAATGGACCAATGGAGAGGTAGAATAGAACTCTATTCCTTCCCTGTGATTTCTTTGTATACCAAAATGCTCTCACTGCCTTCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAAAGTATATATTTTCTTACTACTAAGTGTAAAAAGAAACTAAACGTACGAGGTAATATGTAATAGTAACTACGCTGTATCATGGATGTTATTTACCCTCCTTTAGACTCCTAAAGCTTTTGAAGTTTCTGTTTGAGACTTCAGCTGAAGAGTTCTTTGTGTTTTCTTTAGCCGCTATATTAACCAACATGTTTCAATTTTTCAGTCCTTAAACGCAAGTTCTCGAGCATCTCTGATGCAGAAGCTGGACCGTACTGGCACCGCATCTAGGTATGTCTTTGTTGAGCTTTACATCATTTTAAAATTTGCAGGTTGGTCTTACATCTGTTTTCTCTGCAGCATTGCTGGTTCTTTAGGGACACATGTTAATAACGCAGGCGCTACCTTGCCCATGGCACCTATTCTTGGAGCTGCAACTATCCCTTCCCTTGCTACTCCTTTGGCTACTGTTCCTGCTTTTCCTGTACTCAGTGCAGGCGTTCAGGTTCCCACTGTTACTGCCAATTTACTCAGTGTTGGTACTCCAAGTGAATGCTTACTATTGAAGAATATGTTTGATCCTACAGCTGAGGTATACTCCATCATTCTAAAGATATATGTTAAGTTTTCTGTTTTTGTTTAAAGTTCAACTGGTTATCCCTTGTGTTCGGCAGTCGGAACCAAATTTTGATATGGATATCAGAGACGACGTTGAGGAGGAATGCTCTAGGTTTGGAAAATTAAGACACATATTTGTTGACAAGTAAGTTTAGGACTTGAACATTCATGTTGCAGTTTTTAATTCCTCCCCCTACTCACATATGTAATTTGTTTATTTTCTTCTTCATGGACAGGAATAGCGCCGGTTTTGTATATTTGAGATTTGAAAATTCACAGTCTGCAATGGATGCACAACGTGCTCTTAATGGAAGATGGTTTGCTGGGAAAATGATCGGTGCAACTTTCATGGTAAATCTTTGGTTATTGTCTTTTACTTCATCTGTTAGAACAATGTCATTAACTTTTTACAAATTTCTTTCGTATCTTCAGGACATCCCGAGCTACGAAGCGAAATTTCCAGATAGCAGATAG

mRNA sequence

ATGGATTTTGATGAGTATGATTATTTAGAGAAAACTGTTGAAAATCCCGAGGGACAGAAAGTGAAGGAAACTGCCAATGGCGGTGATGCAGAAATGAAGTCTGGAGATAAACATCCTAGTCGAAGTTCAAAGTATAAGAGTGATGGTAAAGATGATGGGGAACATAGGTCAAAACGTTCAAAATCAGAAGATGTGTCAAAACGTTCAAAATCAGAAGATGAGTCACGGGATCATGATCGACATAGAGATAGGACTTCTTCCCGGCACCGGTCTAGGTCCAGAGACAGAGACAGAGACCGTGATCGACACAGAAGCAGTAAGGAATATAGGGGAAAAGAGGACAAAGAAAGGAATCGGGAAGAGAGGAGCAGTAAGGACAGAGATGCGGACAGAGATAAAGAACGTGCTCATGATCGTGATAGACGAGGTAGAGATGGTGAAAGGGAAAGGGAAAGAGAACGGTCACGTCGAAGTAGAAGTCGTTCAGAAAGACATCGCAGTGATCGAGATGAAAGCATAAGAGAGAGGAGCCGAGATAATGAATTCAGAGAAAGGGAAAAGGAGAGAGAGTCAAGAGAGCGAGGCAGAGATGGCAGAAGATATAAAGAGAAAAAGGAAGAAGCAGCAGAACCAGAAGCAGATCCTGAAAGGGATCAAAGGACTGTATTTGCCTATCAGATAAGTTTGAAGGCAACTGAAAGAGATGTGTACGAATTCTTCTCCAGGGCCGGTAAGGTGCGAGATGTACGCCTCATAATGGATCGTAATTCAAGACGTTCTAAAGGCGTCGGGTATGTTGAATTTGTAGATGCTATGTCTGTGCCCATGGCTATAGCACTTTCAGGCCAGCTCTTGCTTAGTCAACCTGTGATGGTAAAGCCGTCTGAAGCTGAGAAGAACCAGGTGCAATCAACTTCTGCTGCTGGTGGATCAGGTGGAGTAATGGGCCCCTACTCTGGTGGTGCCAGAAGGTTATATGTTGGCAATCTGCACCCCAACATAACAGAAGATAACCTTCGTCAGGTTTTTGGAGCTTTTGGCACTGTGGAACTGGTTCAGATGCCCCTTGATGAAACTGGGCACTGCAAGGGTTTTGGTTTTGTTCAGTTCACACGTCTTGAAGATGCTAAAAATGCACTGAGTTTGAATGGACAACTTGAGATTGCTGGTCGAACGATAAAGGTGTCCACAGTCACAGATCAGCCTGGACTGCAAGATATTGGAGCAAGTACTGGTGACCTTGACGATGAAGATGGAGTTGGCTTGTCCTTAAACGCAAGTTCTCGAGCATCTCTGATGCAGAAGCTGGACCGTACTGGCACCGCATCTAGCATTGCTGGTTCTTTAGGGACACATGTTAATAACGCAGGCGCTACCTTGCCCATGGCACCTATTCTTGGAGCTGCAACTATCCCTTCCCTTGCTACTCCTTTGGCTACTGTTCCTGCTTTTCCTGTACTCAGTGCAGGCGTTCAGGTTCCCACTGTTACTGCCAATTTACTCAGTGTTGGTACTCCAAGTGAATGCTTACTATTGAAGAATATGTTTGATCCTACAGCTGAGTCGGAACCAAATTTTGATATGGATATCAGAGACGACGTTGAGGAGGAATGCTCTAGGTTTGGAAAATTAAGACACATATTTGTTGACAAGAATAGCGCCGGTTTTGTATATTTGAGATTTGAAAATTCACAGTCTGCAATGGATGCACAACGTGCTCTTAATGGAAGATGGTTTGCTGGGAAAATGATCGGTGCAACTTTCATGGACATCCCGAGCTACGAAGCGAAATTTCCAGATAGCAGATAG

Coding sequence (CDS)

ATGGATTTTGATGAGTATGATTATTTAGAGAAAACTGTTGAAAATCCCGAGGGACAGAAAGTGAAGGAAACTGCCAATGGCGGTGATGCAGAAATGAAGTCTGGAGATAAACATCCTAGTCGAAGTTCAAAGTATAAGAGTGATGGTAAAGATGATGGGGAACATAGGTCAAAACGTTCAAAATCAGAAGATGTGTCAAAACGTTCAAAATCAGAAGATGAGTCACGGGATCATGATCGACATAGAGATAGGACTTCTTCCCGGCACCGGTCTAGGTCCAGAGACAGAGACAGAGACCGTGATCGACACAGAAGCAGTAAGGAATATAGGGGAAAAGAGGACAAAGAAAGGAATCGGGAAGAGAGGAGCAGTAAGGACAGAGATGCGGACAGAGATAAAGAACGTGCTCATGATCGTGATAGACGAGGTAGAGATGGTGAAAGGGAAAGGGAAAGAGAACGGTCACGTCGAAGTAGAAGTCGTTCAGAAAGACATCGCAGTGATCGAGATGAAAGCATAAGAGAGAGGAGCCGAGATAATGAATTCAGAGAAAGGGAAAAGGAGAGAGAGTCAAGAGAGCGAGGCAGAGATGGCAGAAGATATAAAGAGAAAAAGGAAGAAGCAGCAGAACCAGAAGCAGATCCTGAAAGGGATCAAAGGACTGTATTTGCCTATCAGATAAGTTTGAAGGCAACTGAAAGAGATGTGTACGAATTCTTCTCCAGGGCCGGTAAGGTGCGAGATGTACGCCTCATAATGGATCGTAATTCAAGACGTTCTAAAGGCGTCGGGTATGTTGAATTTGTAGATGCTATGTCTGTGCCCATGGCTATAGCACTTTCAGGCCAGCTCTTGCTTAGTCAACCTGTGATGGTAAAGCCGTCTGAAGCTGAGAAGAACCAGGTGCAATCAACTTCTGCTGCTGGTGGATCAGGTGGAGTAATGGGCCCCTACTCTGGTGGTGCCAGAAGGTTATATGTTGGCAATCTGCACCCCAACATAACAGAAGATAACCTTCGTCAGGTTTTTGGAGCTTTTGGCACTGTGGAACTGGTTCAGATGCCCCTTGATGAAACTGGGCACTGCAAGGGTTTTGGTTTTGTTCAGTTCACACGTCTTGAAGATGCTAAAAATGCACTGAGTTTGAATGGACAACTTGAGATTGCTGGTCGAACGATAAAGGTGTCCACAGTCACAGATCAGCCTGGACTGCAAGATATTGGAGCAAGTACTGGTGACCTTGACGATGAAGATGGAGTTGGCTTGTCCTTAAACGCAAGTTCTCGAGCATCTCTGATGCAGAAGCTGGACCGTACTGGCACCGCATCTAGCATTGCTGGTTCTTTAGGGACACATGTTAATAACGCAGGCGCTACCTTGCCCATGGCACCTATTCTTGGAGCTGCAACTATCCCTTCCCTTGCTACTCCTTTGGCTACTGTTCCTGCTTTTCCTGTACTCAGTGCAGGCGTTCAGGTTCCCACTGTTACTGCCAATTTACTCAGTGTTGGTACTCCAAGTGAATGCTTACTATTGAAGAATATGTTTGATCCTACAGCTGAGTCGGAACCAAATTTTGATATGGATATCAGAGACGACGTTGAGGAGGAATGCTCTAGGTTTGGAAAATTAAGACACATATTTGTTGACAAGAATAGCGCCGGTTTTGTATATTTGAGATTTGAAAATTCACAGTCTGCAATGGATGCACAACGTGCTCTTAATGGAAGATGGTTTGCTGGGAAAATGATCGGTGCAACTTTCATGGACATCCCGAGCTACGAAGCGAAATTTCCAGATAGCAGATAG

Protein sequence

MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHPSRSSKYKSDGKDDGEHRSKRSKSEDVSKRSKSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKEDKERNREERSSKDRDADRDKERAHDRDRRGRDGERERERERSRRSRSRSERHRSDRDESIRERSRDNEFREREKERESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGSGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDETGHCKGFGFVQFTRLEDAKNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGASTGDLDDEDGVGLSLNASSRASLMQKLDRTGTASSIAGSLGTHVNNAGATLPMAPILGAATIPSLATPLATVPAFPVLSAGVQVPTVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIRDDVEEECSRFGKLRHIFVDKNSAGFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR

Homology

[Close]

BLAST of Lag0001408 vs. NCBI nr
Match: XP_022136109.1 (RNA-binding protein 39 isoform X2 [Momordica charantia])

HSP 1 Score: 973.4 bits (2515), Expect = 9.0e-280
Identity = 545/606 (89.93%), Postives = 564/606 (93.07%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHPSRSSKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKH SRSSKYKSDGKDDGEHR    
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHRSRSSKYKSDGKDDGEHR---- 60

Query: 61  KSEDVSKRSKSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKEDKERNRE 120
                SKRSKSEDESRDHDRHRDRTSS+HRSRS  +DRD DR RSSKEYR KEDKERNRE
Sbjct: 61  -----SKRSKSEDESRDHDRHRDRTSSQHRSRS--KDRDXDRRRSSKEYREKEDKERNRE 120

Query: 121 ERSSKDRDADRDKERAHDRD---RRGRDGERERERERSRRSRSRSERHRSDRDESIRERS 180
           ERSSKDRD DRD++R HDRD   RRGRDGER+RERERSRRSRS SERH SDRDESIRERS
Sbjct: 121 ERSSKDRDVDRDRDRGHDRDRESRRGRDGERDRERERSRRSRSHSERHCSDRDESIRERS 180

Query: 181 RDNEFREREKERESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVY 240
           RDNEF+EREKERE+RERGRDGRRYKEKKE+ AEPEADPERDQRTVFAYQI LKATERDVY
Sbjct: 181 RDNEFKEREKERETRERGRDGRRYKEKKEDGAEPEADPERDQRTVFAYQICLKATERDVY 240

Query: 241 EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEA 300
           EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQ LL QPVMVKPSEA
Sbjct: 241 EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQPLLGQPVMVKPSEA 300

Query: 301 EKNQVQSTSAAGGSGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLD 360
           EKNQVQSTSAAGG+GG MGPYSGGARRLYVGNLHP ITED +RQVFG+FGTVELVQMPLD
Sbjct: 301 EKNQVQSTSAAGGTGGAMGPYSGGARRLYVGNLHPEITEDMIRQVFGSFGTVELVQMPLD 360

Query: 361 ETGHCKGFGFVQFTRLEDAKNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGASTGDLDDE 420
           ETGHCKGFGFVQFTRLEDA+NALSLNGQLEI GR IKVSTVTDQPG+QDIGA+TGDLDDE
Sbjct: 361 ETGHCKGFGFVQFTRLEDARNALSLNGQLEIGGRMIKVSTVTDQPGMQDIGANTGDLDDE 420

Query: 421 DGVGLSLNASSRASLMQKLDRTGTASSIAGSLGTH-VNNAGATLPMAPILGAATIPSLAT 480
           DG GLSLNASSRASLMQKLDRTGTASSIAGSLGTH VNN GATLPMAPILGAA+IPSL  
Sbjct: 421 DGGGLSLNASSRASLMQKLDRTGTASSIAGSLGTHVVNNTGATLPMAPILGAASIPSLVP 480

Query: 481 PLATVPAFPVLSAGVQVPTVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIRDDVEE 540
            LAT+PAFP L AG+QVPTVTANLL VG PSECLLLKNMFDPTAESEPNFD+DIRDDVEE
Sbjct: 481 SLATIPAFPGLGAGIQVPTVTANLLGVGAPSECLLLKNMFDPTAESEPNFDLDIRDDVEE 540

Query: 541 ECSRFGKLRHIFVDKNSAGFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDIPSYEA 600
           ECSRFGKLRHI VDKNSAGFVYLRFENSQSAM+AQRALNGRWFAGKMIGATFMDIPSYEA
Sbjct: 541 ECSRFGKLRHIHVDKNSAGFVYLRFENSQSAMEAQRALNGRWFAGKMIGATFMDIPSYEA 595

Query: 601 KFPDSR 603
           KFPDSR
Sbjct: 601 KFPDSR 595

[Close]

BLAST of Lag0001408 vs. NCBI nr
Match: XP_022136108.1 (RNA-binding protein 39 isoform X1 [Momordica charantia])

HSP 1 Score: 967.2 bits (2499), Expect = 6.4e-278
Identity = 545/611 (89.20%), Postives = 564/611 (92.31%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHPSRSSKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKH SRSSKYKSDGKDDGEHR    
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHRSRSSKYKSDGKDDGEHR---- 60

Query: 61  KSEDVSKRSKSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKEDKERNRE 120
                SKRSKSEDESRDHDRHRDRTSS+HRSRS  +DRD DR RSSKEYR KEDKERNRE
Sbjct: 61  -----SKRSKSEDESRDHDRHRDRTSSQHRSRS--KDRDXDRRRSSKEYREKEDKERNRE 120

Query: 121 ERSSKDRDADRDKERAHDRD---RRGRDGERERERERSRRSRSRSERHRSDRDESIRERS 180
           ERSSKDRD DRD++R HDRD   RRGRDGER+RERERSRRSRS SERH SDRDESIRERS
Sbjct: 121 ERSSKDRDVDRDRDRGHDRDRESRRGRDGERDRERERSRRSRSHSERHCSDRDESIRERS 180

Query: 181 RDNEFREREKERESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVY 240
           RDNEF+EREKERE+RERGRDGRRYKEKKE+ AEPEADPERDQRTVFAYQI LKATERDVY
Sbjct: 181 RDNEFKEREKERETRERGRDGRRYKEKKEDGAEPEADPERDQRTVFAYQICLKATERDVY 240

Query: 241 EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEA 300
           EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQ LL QPVMVKPSEA
Sbjct: 241 EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQPLLGQPVMVKPSEA 300

Query: 301 EKNQVQSTSAAGGSGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLD 360
           EKNQVQSTSAAGG+GG MGPYSGGARRLYVGNLHP ITED +RQVFG+FGTVELVQMPLD
Sbjct: 301 EKNQVQSTSAAGGTGGAMGPYSGGARRLYVGNLHPEITEDMIRQVFGSFGTVELVQMPLD 360

Query: 361 ETGHCKGFGFVQFTRLEDAKNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGASTGDLDDE 420
           ETGHCKGFGFVQFTRLEDA+NALSLNGQLEI GR IKVSTVTDQPG+QDIGA+TGDLDDE
Sbjct: 361 ETGHCKGFGFVQFTRLEDARNALSLNGQLEIGGRMIKVSTVTDQPGMQDIGANTGDLDDE 420

Query: 421 DGVGL-----SLNASSRASLMQKLDRTGTASSIAGSLGTH-VNNAGATLPMAPILGAATI 480
           DG GL     SLNASSRASLMQKLDRTGTASSIAGSLGTH VNN GATLPMAPILGAA+I
Sbjct: 421 DGGGLVKESSSLNASSRASLMQKLDRTGTASSIAGSLGTHVVNNTGATLPMAPILGAASI 480

Query: 481 PSLATPLATVPAFPVLSAGVQVPTVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIR 540
           PSL   LAT+PAFP L AG+QVPTVTANLL VG PSECLLLKNMFDPTAESEPNFD+DIR
Sbjct: 481 PSLVPSLATIPAFPGLGAGIQVPTVTANLLGVGAPSECLLLKNMFDPTAESEPNFDLDIR 540

Query: 541 DDVEEECSRFGKLRHIFVDKNSAGFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDI 600
           DDVEEECSRFGKLRHI VDKNSAGFVYLRFENSQSAM+AQRALNGRWFAGKMIGATFMDI
Sbjct: 541 DDVEEECSRFGKLRHIHVDKNSAGFVYLRFENSQSAMEAQRALNGRWFAGKMIGATFMDI 600

Query: 601 PSYEAKFPDSR 603
           PSYEAKFPDSR
Sbjct: 601 PSYEAKFPDSR 600

[Close]

BLAST of Lag0001408 vs. NCBI nr
Match: XP_022969035.1 (RNA-binding protein 39 [Cucurbita maxima] >XP_022969036.1 RNA-binding protein 39 [Cucurbita maxima])

HSP 1 Score: 964.5 bits (2492), Expect = 4.2e-277
Identity = 539/606 (88.94%), Postives = 564/606 (93.07%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHPSRSSKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKH SRSSKYK+DGKDDGEHR    
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHRSRSSKYKTDGKDDGEHR---- 60

Query: 61  KSEDVSKRSKSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKEDKERNRE 120
                SKRSKSEDES DHDRHRDRTSSRHRSRS  RDRDRDRH S KE+RGKED+E+N+E
Sbjct: 61  -----SKRSKSEDESLDHDRHRDRTSSRHRSRS--RDRDRDRHSSGKEFRGKEDREKNQE 120

Query: 121 ERSSKDRDADRDKERAHDRDRRGRDGERERERERSRRSRSRSERHRSDRDESIRERSRDN 180
           ERSSKDRD DRDKER HD DRRGRDGE++RERERS RSRS SERHRSDRDES+R+R+RDN
Sbjct: 121 ERSSKDRDVDRDKERVHDHDRRGRDGEKDRERERSHRSRSHSERHRSDRDESMRQRTRDN 180

Query: 181 EFREREKERESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFF 240
           EFREREKERESRERGRDGRR+KEKKE+  EPEADPERDQRTVFAYQISLKATERDV+EFF
Sbjct: 181 EFREREKERESRERGRDGRRHKEKKEDGTEPEADPERDQRTVFAYQISLKATERDVFEFF 240

Query: 241 SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN 300
           SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN
Sbjct: 241 SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN 300

Query: 301 QVQSTSAAGGSGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDETG 360
           Q QSTSAA G GGVMGPY+GGARRLYVGNLHPNITEDNLRQVFGAFG VELVQMPLDE+G
Sbjct: 301 QAQSTSAAAGPGGVMGPYTGGARRLYVGNLHPNITEDNLRQVFGAFGIVELVQMPLDESG 360

Query: 361 HCKGFGFVQFTRLEDAKNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGASTGDLDDEDGV 420
           HCKGFGF+QF+RLEDA+NALSLNGQLEIAGR IKVSTVTDQPGLQDIGASTGDLDDEDGV
Sbjct: 361 HCKGFGFIQFSRLEDARNALSLNGQLEIAGRMIKVSTVTDQPGLQDIGASTGDLDDEDGV 420

Query: 421 GLSLNASSRASLMQKLDRTGTASSIAGSLGTH-VNNAGATLPMAPILGAATIPSL--ATP 480
           GLSLNASSRASLMQKLDRTGTASSIAGSLGTH VNN GAT+PMAPILG  TIPSL  AT 
Sbjct: 421 GLSLNASSRASLMQKLDRTGTASSIAGSLGTHVVNNTGATMPMAPILGVGTIPSLGVATS 480

Query: 481 LATVPAFPVL-SAGVQVPTVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIRDDVEE 540
           L +VPAFP L +AGVQVPTV ANLL VGTPSECLLLKNMFDPTAE EP FDMDIRDDVEE
Sbjct: 481 LVSVPAFPGLGAAGVQVPTVAANLLGVGTPSECLLLKNMFDPTAELEPTFDMDIRDDVEE 540

Query: 541 ECSRFGKLRHIFVDKNSAGFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDIPSYEA 600
           ECSRFGKL+HI+VDKNSAGFVYLRF NS++AMDAQRALNGRWFAGKMIGATFMDIPSYEA
Sbjct: 541 ECSRFGKLKHIYVDKNSAGFVYLRFANSEAAMDAQRALNGRWFAGKMIGATFMDIPSYEA 595

Query: 601 KFPDSR 603
           KFPDSR
Sbjct: 601 KFPDSR 595

[Close]

BLAST of Lag0001408 vs. NCBI nr
Match: XP_008447936.1 (PREDICTED: RNA-binding protein 39 isoform X1 [Cucumis melo] >XP_016900486.1 PREDICTED: RNA-binding protein 39 isoform X1 [Cucumis melo])

HSP 1 Score: 964.5 bits (2492), Expect = 4.2e-277
Identity = 542/605 (89.59%), Postives = 562/605 (92.89%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHPSRSSKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGD EMKSGDKH SRS KYKSDGKDDGEHR    
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHR---- 60

Query: 61  KSEDVSKRSKSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKEDKERNRE 120
                SKRSKS+DESRD DRHRDRTSSRHRSRS  R+RDRD+HRSSKE RGK+D+E NRE
Sbjct: 61  -----SKRSKSDDESRDRDRHRDRTSSRHRSRS--RERDRDKHRSSKENRGKDDREGNRE 120

Query: 121 ERSSKDRDADRDKERAHDRDRRGRDGERERERERSRRSRSRSERHRSDRDESIRERSRDN 180
           ERSSKDRD DRDKER+HDRDRRGRDGER RERERSRRSRSRSERHRSDRD+ IRERSRDN
Sbjct: 121 ERSSKDRDVDRDKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDN 180

Query: 181 EFREREKERESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFF 240
           E REREKERESRERGRDGRRYK+KK+EAAEPEADPERDQRTVFAYQISLKATERDVYEFF
Sbjct: 181 ELREREKERESRERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFF 240

Query: 241 SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN 300
           SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN
Sbjct: 241 SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN 300

Query: 301 QVQSTSAAGGSGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDETG 360
           QVQSTSAAGG GG MGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDE+G
Sbjct: 301 QVQSTSAAGGPGGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESG 360

Query: 361 HCKGFGFVQFTRLEDAKNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGASTGDLDDEDGV 420
           HCKGFGF+QFTRLEDA+NALSLNGQLEIAGRTIKVSTVTDQPGLQD+GASTGDLD+EDG 
Sbjct: 361 HCKGFGFIQFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGG 420

Query: 421 GLSLNASSRASLMQKLDRTGTASSIAGSLGTH-VNNAGATLPMAPILGAATIPSL--ATP 480
           GLSLNASSRASLMQKLDRTG ASSIAGSLGTH VNN GAT+P APILG ATIPSL   T 
Sbjct: 421 GLSLNASSRASLMQKLDRTGAASSIAGSLGTHVVNNTGATMP-APILGGATIPSLGVGTS 480

Query: 481 LATVPAFPVLSAGVQVPTVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIRDDVEEE 540
           LA  PAFP L AGVQVP VTANLL VGTPSECLLLKNMFDPTAESEP FD+DIRDDVEEE
Sbjct: 481 LAAFPAFPGLGAGVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEE 540

Query: 541 CSRFGKLRHIFVDKNSAGFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDIPSYEAK 600
           CSRFGKL+HI+VDKNSAGFVYLRFE  +SA +AQRALNGRWFAGKMIGATFMDIPSYEAK
Sbjct: 541 CSRFGKLKHIYVDKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAK 593

Query: 601 FPDSR 603
           FPDSR
Sbjct: 601 FPDSR 593

[Close]

BLAST of Lag0001408 vs. NCBI nr
Match: XP_011658601.1 (RNA-binding protein 39 isoform X1 [Cucumis sativus] >XP_031744308.1 RNA-binding protein 39 isoform X1 [Cucumis sativus] >XP_031744309.1 RNA-binding protein 39 isoform X1 [Cucumis sativus] >KGN43267.1 hypothetical protein Csa_020331 [Cucumis sativus])

HSP 1 Score: 964.5 bits (2492), Expect = 4.2e-277
Identity = 541/605 (89.42%), Postives = 563/605 (93.06%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHPSRSSKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGD EMKSGDKH SRSSKYKSDGKDDGEHR    
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGEHR---- 60

Query: 61  KSEDVSKRSKSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKEDKERNRE 120
                SK  KS+DESRD DRHRDRTSSRHRSRS  R+RDRDRHRSSKE RGKED+E NRE
Sbjct: 61  -----SKHLKSDDESRDRDRHRDRTSSRHRSRS--RERDRDRHRSSKENRGKEDREGNRE 120

Query: 121 ERSSKDRDADRDKERAHDRDRRGRDGERERERERSRRSRSRSERHRSDRDESIRERSRDN 180
           ERSSKDRD DRDKER+HDRDRRGRDGER RERE+SRRSRSRSERHRSDRD+ IRERSRDN
Sbjct: 121 ERSSKDRDVDRDKERSHDRDRRGRDGERNREREQSRRSRSRSERHRSDRDDGIRERSRDN 180

Query: 181 EFREREKERESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFF 240
           E REREKERESRERGRDGRRYK+KK+E AEPEADPERDQRTVFAYQISLKATERDVYEFF
Sbjct: 181 ELREREKERESRERGRDGRRYKDKKDETAEPEADPERDQRTVFAYQISLKATERDVYEFF 240

Query: 241 SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN 300
           SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN
Sbjct: 241 SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN 300

Query: 301 QVQSTSAAGGSGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDETG 360
           QVQSTSAAGG GG MGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMP+DE+G
Sbjct: 301 QVQSTSAAGGPGGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESG 360

Query: 361 HCKGFGFVQFTRLEDAKNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGASTGDLDDEDGV 420
           HCKGFGF+QFTRLEDA+NALSLNGQLEIAGRTIKVSTVTDQPGLQD+GASTGDLD+EDG 
Sbjct: 361 HCKGFGFIQFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGG 420

Query: 421 GLSLNASSRASLMQKLDRTGTASSIAGSLGTH-VNNAGATLPMAPILGAATIPSLA--TP 480
           GLSLNASSRASLMQKLDRTG ASSIAGSLGTH VNN GAT+P APILG ATIPSL+  T 
Sbjct: 421 GLSLNASSRASLMQKLDRTGAASSIAGSLGTHVVNNTGATMP-APILGGATIPSLSVGTS 480

Query: 481 LATVPAFPVLSAGVQVPTVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIRDDVEEE 540
           LA  PAFP L AGVQVP VTANLL VGTPSECLLLKNMFDPTAESEP FD+DIRDDVEEE
Sbjct: 481 LAAFPAFPGLGAGVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEE 540

Query: 541 CSRFGKLRHIFVDKNSAGFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDIPSYEAK 600
           CSRFGKL+HI+VD+NSAGFVYLRFE S+SAM+AQRALNGRWFAGKMIGATFMDIPSYEAK
Sbjct: 541 CSRFGKLKHIYVDRNSAGFVYLRFEKSESAMEAQRALNGRWFAGKMIGATFMDIPSYEAK 593

Query: 601 FPDSR 603
           FPDSR
Sbjct: 601 FPDSR 593

[Close]

BLAST of Lag0001408 vs. ExPASy Swiss-Prot
Match: Q5RC80 (RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.2e-62
Identity = 209/537 (38.92%), Postives = 290/537 (54.00%), Query Frame = 0


Query: 70  KSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKEDKERNREERSSKDRDA 129
           K E++    + H +R+  R +S+SR R  +R R +S         KER R       RD 
Sbjct: 17  KDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKS---------KERKR------SRDR 76

Query: 130 DRDKERAHDRDRRGRDGERERERERSRRSRSRSERHRSDRDESIRERSRDNEFREREKER 189
           +R K ++ +R +R R  ER R R RSR  R R  R+RS         +   +       +
Sbjct: 77  ERKKSKSRER-KRSRSKERRRSRSRSRDRRFRG-RYRSPYSGPKFNSAIRGKIGLPHSIK 136

Query: 190 ESRERGRDGRRYKEKKEEAAEP---EADPERDQRTVFAYQISLKATERDVYEFFSRAGKV 249
            SR R R    +++ K    EP       ERD RTVF  Q++ +   RD+ EFFS  GKV
Sbjct: 137 LSRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKV 196

Query: 250 RDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTS 309
           RDVR+I DRNSRRSKG+ YVEFVD  SVP+AI L+GQ +L  P++V+ S+AEKN+     
Sbjct: 197 RDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR----- 256

Query: 310 AAGGSGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLD-ETGHCKGF 369
            A      +   S G  RLYVG+LH NITED LR +F  FG +E +Q+ +D ETG  KG+
Sbjct: 257 -AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGY 316

Query: 370 GFVQFTRLEDAKNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGASTGDLDDEDGVGLSLN 429
           GF+ F+  E AK AL      E+AGR +KV  VT++       +S  D D+ +  G+ L 
Sbjct: 317 GFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASS-ASSFLDSDELERTGIDLG 376

Query: 430 ASSRASLMQKLDRTGTASSIAGSLGTHVNNAGATLPMAPILGAATIPSLATPLATVPAFP 489
            + R  LM +L   GT   I  +       A   L M+  L    +  L T L+      
Sbjct: 377 TTGRLQLMARL-AEGTGLQIPPA-------AQQALQMSGSLAFGAVADLQTRLSQQTEAS 436

Query: 490 VLSAGVQVPTVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIRDDVEEECSRFGKLR 549
            L+A   V  +          ++C  L NMF+P  E E  +D +I+DDV EEC++ G + 
Sbjct: 437 ALAAAASVQPLA---------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVI 496

Query: 550 HIFVDKNSA-GFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDIPSYEAKFPDS 602
           HI+VDKNSA G VY++  +  +A+ A  AL+GRWFAGKMI A ++ +P+Y   FPDS
Sbjct: 497 HIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDS 512

[Close]

BLAST of Lag0001408 vs. ExPASy Swiss-Prot
Match: Q8VH51 (RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2)

HSP 1 Score: 240.0 bits (611), Expect = 7.1e-62
Identity = 207/537 (38.55%), Postives = 292/537 (54.38%), Query Frame = 0


Query: 70  KSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKEDKERNREERSSKDRDA 129
           K E++    + H +R+  R +S+SR R  +R R +S         KER R       RD 
Sbjct: 17  KDENKLNSANGHEERSKKRKKSKSRSRSHERKRSKS---------KERKR------SRDR 76

Query: 130 DRDKERAHDRDRRGRDGERERERERSRRSRSRSERHRSDRDESIRERSRDNEFREREKER 189
           +R K ++ +R +R R  ER R R RSR  R R  R+RS         +   +       +
Sbjct: 77  ERKKSKSRER-KRSRSKERRRSRSRSRDRRFRG-RYRSPYSGPKFNSAIRGKIGLPHSIK 136

Query: 190 ESRERGRDGRRYKEKKEEAAEP---EADPERDQRTVFAYQISLKATERDVYEFFSRAGKV 249
            SR R R    +++ K    EP       ERD RTVF  Q++ +   RD+ EFFS  GKV
Sbjct: 137 LSRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKV 196

Query: 250 RDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTS 309
           RDVR+I DRNSRRSKG+ YVEFVD  SVP+AI L+GQ +L  P++V+ S+AEKN+     
Sbjct: 197 RDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR----- 256

Query: 310 AAGGSGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLD-ETGHCKGF 369
            A      +   S G  RLYVG+LH NITED LR +F  FG +E +Q+ +D ETG  KG+
Sbjct: 257 -AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGY 316

Query: 370 GFVQFTRLEDAKNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGASTGDLDDEDGVGLSLN 429
           GF+ F+  E AK AL      E+AGR +KV  VT++       +S  D D+ +  G+ L 
Sbjct: 317 GFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASS-ASSFLDSDELERTGIDLG 376

Query: 430 ASSRASLMQKLDRTGTASSIAGSLGTHVNNAGATLPMAPILGAATIPSLATPLATVPAFP 489
            + R  LM +L   GT   I  +    +  +G +L    +   + +  L T L+      
Sbjct: 377 TTGRLQLMARL-AEGTGLQIPPAAQQALQMSG-SLAFGAVAEFSFVIDLQTRLSQQTEAS 436

Query: 490 VLSAGVQVPTVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIRDDVEEECSRFGKLR 549
            L+A   V  +          ++C  L NMF+P  E E  +D +I+DDV EEC++ G + 
Sbjct: 437 ALAAAASVQPLA---------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVI 496

Query: 550 HIFVDKNSA-GFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDIPSYEAKFPDS 602
           HI+VDKNSA G VY++  +  +A+ A  AL+GRWFAGKMI A ++ +P+Y   FPDS
Sbjct: 497 HIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDS 518

[Close]

BLAST of Lag0001408 vs. ExPASy Swiss-Prot
Match: Q14498 (RNA-binding protein 39 OS=Homo sapiens OX=9606 GN=RBM39 PE=1 SV=2)

HSP 1 Score: 239.6 bits (610), Expect = 9.3e-62
Identity = 207/537 (38.55%), Postives = 292/537 (54.38%), Query Frame = 0


Query: 70  KSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKEDKERNREERSSKDRDA 129
           K E++    + H +R+  R +S+SR R  +R R +S         KER R       RD 
Sbjct: 17  KDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKS---------KERKR------SRDR 76

Query: 130 DRDKERAHDRDRRGRDGERERERERSRRSRSRSERHRSDRDESIRERSRDNEFREREKER 189
           +R K ++ +R +R R  ER R R RSR  R R  R+RS         +   +       +
Sbjct: 77  ERKKSKSRER-KRSRSKERRRSRSRSRDRRFRG-RYRSPYSGPKFNSAIRGKIGLPHSIK 136

Query: 190 ESRERGRDGRRYKEKKEEAAEP---EADPERDQRTVFAYQISLKATERDVYEFFSRAGKV 249
            SR R R    +++ K    EP       ERD RTVF  Q++ +   RD+ EFFS  GKV
Sbjct: 137 LSRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKV 196

Query: 250 RDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTS 309
           RDVR+I DRNSRRSKG+ YVEFVD  SVP+AI L+GQ +L  P++V+ S+AEKN+     
Sbjct: 197 RDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNR----- 256

Query: 310 AAGGSGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLD-ETGHCKGF 369
            A      +   S G  RLYVG+LH NITED LR +F  FG +E +Q+ +D ETG  KG+
Sbjct: 257 -AAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGY 316

Query: 370 GFVQFTRLEDAKNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGASTGDLDDEDGVGLSLN 429
           GF+ F+  E AK AL      E+AGR +KV  VT++       +S  D D+ +  G+ L 
Sbjct: 317 GFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASS-ASSFLDSDELERTGIDLG 376

Query: 430 ASSRASLMQKLDRTGTASSIAGSLGTHVNNAGATLPMAPILGAATIPSLATPLATVPAFP 489
            + R  LM +L   GT   I  +    +  +G +L    +   + +  L T L+      
Sbjct: 377 TTGRLQLMARL-AEGTGLQIPPAAQQALQMSG-SLAFGAVAEFSFVIDLQTRLSQQTEAS 436

Query: 490 VLSAGVQVPTVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIRDDVEEECSRFGKLR 549
            L+A   V  +          ++C  L NMF+P  E E  +D +I+DDV EEC++ G + 
Sbjct: 437 ALAAAASVQPLA---------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVI 496

Query: 550 HIFVDKNSA-GFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDIPSYEAKFPDS 602
           HI+VDKNSA G VY++  +  +A+ A  AL+GRWFAGKMI A ++ +P+Y   FPDS
Sbjct: 497 HIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDS 518

[Close]

BLAST of Lag0001408 vs. ExPASy Swiss-Prot
Match: O13845 (RNA-binding protein rsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rsd1 PE=1 SV=2)

HSP 1 Score: 151.4 bits (381), Expect = 3.3e-35
Identity = 183/631 (29.00%), Postives = 287/631 (45.48%), Query Frame = 0


Query: 10  EKTVENPEGQKVKETANGGDAEMKSGDKHPSR----------------SSKYKSDGKDDG 69
           ++  +N E Q+   ++    +   S   HPS                 S  Y+S+G+   
Sbjct: 16  QEVPQNQENQQKASSSFHESSLTSSTHSHPSNPPPPPTRLHDRSFKPVSKNYESEGRLTP 75

Query: 70  EHRSKRSKSEDVSKRSKSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKE 129
              S   +    SK+S   ++S  +D     +SS    R          HR S   R  +
Sbjct: 76  PPVSMGYRYARSSKQSFQREDSGYNDDVVTNSSSHRTPR---------HHRRSYSPR-SD 135

Query: 130 DKERNREERSSKDRDADRDKERAHDRDRRGRDGERERERERSRRSRSRSERHRSDRDESI 189
              R+    SS D    R   R+ DRDR  R         RSR   SRS     D   S 
Sbjct: 136 YGSRSPSPHSSVDSHQSRSPVRSRDRDRSSRS-------SRSRHPSSRSRHRYDDYSRSP 195

Query: 190 RERSRDNEFREREKERESR---------ERGRDGRRYKEKKEEAAEPE------ADPERD 249
              SR +  R R +ER SR         E  RD  R  E+K   + P       ++ ERD
Sbjct: 196 PYSSRHSRSRRRYEERSSRSSRAHDYDYEDLRDDDRSHERKRSRSRPRERSSKLSEEERD 255

Query: 250 QRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAI 309
           +RTVF  Q++ + T R++Y+FF +AG VRD +++ D+ S RSKGV YVEF    SV  AI
Sbjct: 256 RRTVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAI 315

Query: 310 ALSGQLLLSQPVMVKPSEAEKN-QVQSTSAAGGSGGVMGPYSGGARRLYVGNLHPNITED 369
           ALSG+ LL  PV+V+ +EAEKN + +  +    +     P+     RL V N+H N+T++
Sbjct: 316 ALSGKRLLGLPVIVQLTEAEKNRKAREAAELARAASAEIPF----HRLCVSNIHFNLTDE 375

Query: 370 NLRQVFGAFGTVELVQMPLDETGHCKGFGFVQFTRLEDAKNALSLNGQLEIAGRTIKVST 429
           +++ +F  FG +E V +  D+    KGFG++Q+     A+NAL      ++AGR ++V  
Sbjct: 376 DVKAIFEPFGDIEFVHLQRDDQNRSKGFGYIQYRNPISARNALEKMNGFDLAGRNMRVCL 435

Query: 430 VTDQPGLQDIGASTGDLDDEDGVGLSLNASSRASLMQKLDRTGTASSIAGSLGTHVNNAG 489
             D+                          + +S++++ D   T +    S  +  N   
Sbjct: 436 GNDK----------------------FTTETTSSMLKRFDE--TLARQERSQPSQRNGGS 495

Query: 490 ATLPMAPILGAATIPSLATPLATVPAFPVLSAGVQVPTVTANLLSVGTP-----SECLLL 549
           +T        AA +         +    ++    +   ++ N   V  P     S C LL
Sbjct: 496 STYESQDYREAAPLSPTEEESRPITRDELMKKLARSEDISDNSKLVSEPEPPIRSRCALL 555

Query: 550 KNMFDPTAESEPNFDMDIRDDVEEEC-SRFGKLRHIFVDKNSAGFVYLRFENSQSAMDAQ 603
           +NMF+P  E+ PN+  ++  DV+EEC  ++GK+ HI V  N  G ++++FEN+  A  A 
Sbjct: 556 ENMFNPAEETSPNWVQELEQDVKEECDEKYGKVVHIAVVPNELGQIFVKFENADFAEKAI 601

[Close]

BLAST of Lag0001408 vs. ExPASy Swiss-Prot
Match: Q86U06 (Probable RNA-binding protein 23 OS=Homo sapiens OX=9606 GN=RBM23 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.1e-29
Identity = 159/452 (35.18%), Postives = 223/452 (49.34%), Query Frame = 0


Query: 70  KSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKEDKERNREERSSKDRDA 129
           K EDE +  +  +D  S+   S S           S  E  G        +++ S+  + 
Sbjct: 20  KEEDEQQRKEVKKDYPSNTTSSTS----------NSGNETSGSSTIGETSKKKRSRSHNK 79

Query: 130 DRDKERAHDRDRRGRDGERERERERSRRSRSRSERHRS---DRDESIRERSRDNEFRERE 189
            RD++R+  RDR     +R R R    RS  R  RHRS   DR      RSRD+   +R 
Sbjct: 80  SRDRKRSRSRDR-----DRYRRRNSRSRSPGRQCRHRSRSWDRRHGSESRSRDHRREDRV 139

Query: 190 KERES------RERGRDGRRYKEKK--EEAAEPEADPERDQRTVFAYQISLKATERDVYE 249
             R        R        ++EK    E  +  +  ERD RTVF  Q++ +   RD+ +
Sbjct: 140 HYRSPPLATGYRYGHSKSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLED 199

Query: 250 FFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAE 309
           FFS  GKVRDVR+I DRNSRRSKG+ YVEF +  SVP+AI L+GQ LL  P++V+ S+AE
Sbjct: 200 FFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAE 259

Query: 310 KNQVQSTSAAGGSGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVE-LVQMPLD 369
           KN++ + +     G      +GG  RLYVG+LH NITED LR +F  FG ++ +V M   
Sbjct: 260 KNRLAAMANNLQKG------NGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDS 319

Query: 370 ETGHCKGFGFVQFTRLEDAKNALSLNGQLEIAGRTIKVSTVTDQ-PGLQDIGASTGDLDD 429
           +TG  KG+GF+ F+  E A+ AL      E+AGR ++V  VT++  G  DI    GD + 
Sbjct: 320 DTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTERLDGGTDITFPDGDQEL 379

Query: 430 EDGVGLSLNASSRASLMQKLDRTGTASSIAGSLGTHVNNAGATLPMAPILGAATIPSLAT 489
           + G     +A  R  LM KL         A   G  + +  A    A    AA   + A 
Sbjct: 380 DLG-----SAGGRFQLMAKL---------AEGAGIQLPSTAAAAAAAAAQAAALQLNGAV 436

Query: 490 PLATV--PAFPVLSAGVQVPTVTANLLSVGTP 507
           PL  +   A   LS  + + +    L S+ TP
Sbjct: 440 PLGALNPAALTALSPALNLASQCFQLSSLFTP 436

[Close]

BLAST of Lag0001408 vs. ExPASy TrEMBL
Match: A0A6J1C3C8 (RNA-binding protein 39 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007883 PE=4 SV=1)

HSP 1 Score: 973.4 bits (2515), Expect = 4.3e-280
Identity = 545/606 (89.93%), Postives = 564/606 (93.07%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHPSRSSKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKH SRSSKYKSDGKDDGEHR    
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHRSRSSKYKSDGKDDGEHR---- 60

Query: 61  KSEDVSKRSKSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKEDKERNRE 120
                SKRSKSEDESRDHDRHRDRTSS+HRSRS  +DRD DR RSSKEYR KEDKERNRE
Sbjct: 61  -----SKRSKSEDESRDHDRHRDRTSSQHRSRS--KDRDXDRRRSSKEYREKEDKERNRE 120

Query: 121 ERSSKDRDADRDKERAHDRD---RRGRDGERERERERSRRSRSRSERHRSDRDESIRERS 180
           ERSSKDRD DRD++R HDRD   RRGRDGER+RERERSRRSRS SERH SDRDESIRERS
Sbjct: 121 ERSSKDRDVDRDRDRGHDRDRESRRGRDGERDRERERSRRSRSHSERHCSDRDESIRERS 180

Query: 181 RDNEFREREKERESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVY 240
           RDNEF+EREKERE+RERGRDGRRYKEKKE+ AEPEADPERDQRTVFAYQI LKATERDVY
Sbjct: 181 RDNEFKEREKERETRERGRDGRRYKEKKEDGAEPEADPERDQRTVFAYQICLKATERDVY 240

Query: 241 EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEA 300
           EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQ LL QPVMVKPSEA
Sbjct: 241 EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQPLLGQPVMVKPSEA 300

Query: 301 EKNQVQSTSAAGGSGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLD 360
           EKNQVQSTSAAGG+GG MGPYSGGARRLYVGNLHP ITED +RQVFG+FGTVELVQMPLD
Sbjct: 301 EKNQVQSTSAAGGTGGAMGPYSGGARRLYVGNLHPEITEDMIRQVFGSFGTVELVQMPLD 360

Query: 361 ETGHCKGFGFVQFTRLEDAKNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGASTGDLDDE 420
           ETGHCKGFGFVQFTRLEDA+NALSLNGQLEI GR IKVSTVTDQPG+QDIGA+TGDLDDE
Sbjct: 361 ETGHCKGFGFVQFTRLEDARNALSLNGQLEIGGRMIKVSTVTDQPGMQDIGANTGDLDDE 420

Query: 421 DGVGLSLNASSRASLMQKLDRTGTASSIAGSLGTH-VNNAGATLPMAPILGAATIPSLAT 480
           DG GLSLNASSRASLMQKLDRTGTASSIAGSLGTH VNN GATLPMAPILGAA+IPSL  
Sbjct: 421 DGGGLSLNASSRASLMQKLDRTGTASSIAGSLGTHVVNNTGATLPMAPILGAASIPSLVP 480

Query: 481 PLATVPAFPVLSAGVQVPTVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIRDDVEE 540
            LAT+PAFP L AG+QVPTVTANLL VG PSECLLLKNMFDPTAESEPNFD+DIRDDVEE
Sbjct: 481 SLATIPAFPGLGAGIQVPTVTANLLGVGAPSECLLLKNMFDPTAESEPNFDLDIRDDVEE 540

Query: 541 ECSRFGKLRHIFVDKNSAGFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDIPSYEA 600
           ECSRFGKLRHI VDKNSAGFVYLRFENSQSAM+AQRALNGRWFAGKMIGATFMDIPSYEA
Sbjct: 541 ECSRFGKLRHIHVDKNSAGFVYLRFENSQSAMEAQRALNGRWFAGKMIGATFMDIPSYEA 595

Query: 601 KFPDSR 603
           KFPDSR
Sbjct: 601 KFPDSR 595

[Close]

BLAST of Lag0001408 vs. ExPASy TrEMBL
Match: A0A6J1C6Q3 (RNA-binding protein 39 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007883 PE=4 SV=1)

HSP 1 Score: 967.2 bits (2499), Expect = 3.1e-278
Identity = 545/611 (89.20%), Postives = 564/611 (92.31%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHPSRSSKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKH SRSSKYKSDGKDDGEHR    
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHRSRSSKYKSDGKDDGEHR---- 60

Query: 61  KSEDVSKRSKSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKEDKERNRE 120
                SKRSKSEDESRDHDRHRDRTSS+HRSRS  +DRD DR RSSKEYR KEDKERNRE
Sbjct: 61  -----SKRSKSEDESRDHDRHRDRTSSQHRSRS--KDRDXDRRRSSKEYREKEDKERNRE 120

Query: 121 ERSSKDRDADRDKERAHDRD---RRGRDGERERERERSRRSRSRSERHRSDRDESIRERS 180
           ERSSKDRD DRD++R HDRD   RRGRDGER+RERERSRRSRS SERH SDRDESIRERS
Sbjct: 121 ERSSKDRDVDRDRDRGHDRDRESRRGRDGERDRERERSRRSRSHSERHCSDRDESIRERS 180

Query: 181 RDNEFREREKERESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVY 240
           RDNEF+EREKERE+RERGRDGRRYKEKKE+ AEPEADPERDQRTVFAYQI LKATERDVY
Sbjct: 181 RDNEFKEREKERETRERGRDGRRYKEKKEDGAEPEADPERDQRTVFAYQICLKATERDVY 240

Query: 241 EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEA 300
           EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQ LL QPVMVKPSEA
Sbjct: 241 EFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQPLLGQPVMVKPSEA 300

Query: 301 EKNQVQSTSAAGGSGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLD 360
           EKNQVQSTSAAGG+GG MGPYSGGARRLYVGNLHP ITED +RQVFG+FGTVELVQMPLD
Sbjct: 301 EKNQVQSTSAAGGTGGAMGPYSGGARRLYVGNLHPEITEDMIRQVFGSFGTVELVQMPLD 360

Query: 361 ETGHCKGFGFVQFTRLEDAKNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGASTGDLDDE 420
           ETGHCKGFGFVQFTRLEDA+NALSLNGQLEI GR IKVSTVTDQPG+QDIGA+TGDLDDE
Sbjct: 361 ETGHCKGFGFVQFTRLEDARNALSLNGQLEIGGRMIKVSTVTDQPGMQDIGANTGDLDDE 420

Query: 421 DGVGL-----SLNASSRASLMQKLDRTGTASSIAGSLGTH-VNNAGATLPMAPILGAATI 480
           DG GL     SLNASSRASLMQKLDRTGTASSIAGSLGTH VNN GATLPMAPILGAA+I
Sbjct: 421 DGGGLVKESSSLNASSRASLMQKLDRTGTASSIAGSLGTHVVNNTGATLPMAPILGAASI 480

Query: 481 PSLATPLATVPAFPVLSAGVQVPTVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIR 540
           PSL   LAT+PAFP L AG+QVPTVTANLL VG PSECLLLKNMFDPTAESEPNFD+DIR
Sbjct: 481 PSLVPSLATIPAFPGLGAGIQVPTVTANLLGVGAPSECLLLKNMFDPTAESEPNFDLDIR 540

Query: 541 DDVEEECSRFGKLRHIFVDKNSAGFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDI 600
           DDVEEECSRFGKLRHI VDKNSAGFVYLRFENSQSAM+AQRALNGRWFAGKMIGATFMDI
Sbjct: 541 DDVEEECSRFGKLRHIHVDKNSAGFVYLRFENSQSAMEAQRALNGRWFAGKMIGATFMDI 600

Query: 601 PSYEAKFPDSR 603
           PSYEAKFPDSR
Sbjct: 601 PSYEAKFPDSR 600

[Close]

BLAST of Lag0001408 vs. ExPASy TrEMBL
Match: A0A6J1HYU3 (RNA-binding protein 39 OS=Cucurbita maxima OX=3661 GN=LOC111468152 PE=4 SV=1)

HSP 1 Score: 964.5 bits (2492), Expect = 2.0e-277
Identity = 539/606 (88.94%), Postives = 564/606 (93.07%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHPSRSSKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKH SRSSKYK+DGKDDGEHR    
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHRSRSSKYKTDGKDDGEHR---- 60

Query: 61  KSEDVSKRSKSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKEDKERNRE 120
                SKRSKSEDES DHDRHRDRTSSRHRSRS  RDRDRDRH S KE+RGKED+E+N+E
Sbjct: 61  -----SKRSKSEDESLDHDRHRDRTSSRHRSRS--RDRDRDRHSSGKEFRGKEDREKNQE 120

Query: 121 ERSSKDRDADRDKERAHDRDRRGRDGERERERERSRRSRSRSERHRSDRDESIRERSRDN 180
           ERSSKDRD DRDKER HD DRRGRDGE++RERERS RSRS SERHRSDRDES+R+R+RDN
Sbjct: 121 ERSSKDRDVDRDKERVHDHDRRGRDGEKDRERERSHRSRSHSERHRSDRDESMRQRTRDN 180

Query: 181 EFREREKERESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFF 240
           EFREREKERESRERGRDGRR+KEKKE+  EPEADPERDQRTVFAYQISLKATERDV+EFF
Sbjct: 181 EFREREKERESRERGRDGRRHKEKKEDGTEPEADPERDQRTVFAYQISLKATERDVFEFF 240

Query: 241 SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN 300
           SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN
Sbjct: 241 SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN 300

Query: 301 QVQSTSAAGGSGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDETG 360
           Q QSTSAA G GGVMGPY+GGARRLYVGNLHPNITEDNLRQVFGAFG VELVQMPLDE+G
Sbjct: 301 QAQSTSAAAGPGGVMGPYTGGARRLYVGNLHPNITEDNLRQVFGAFGIVELVQMPLDESG 360

Query: 361 HCKGFGFVQFTRLEDAKNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGASTGDLDDEDGV 420
           HCKGFGF+QF+RLEDA+NALSLNGQLEIAGR IKVSTVTDQPGLQDIGASTGDLDDEDGV
Sbjct: 361 HCKGFGFIQFSRLEDARNALSLNGQLEIAGRMIKVSTVTDQPGLQDIGASTGDLDDEDGV 420

Query: 421 GLSLNASSRASLMQKLDRTGTASSIAGSLGTH-VNNAGATLPMAPILGAATIPSL--ATP 480
           GLSLNASSRASLMQKLDRTGTASSIAGSLGTH VNN GAT+PMAPILG  TIPSL  AT 
Sbjct: 421 GLSLNASSRASLMQKLDRTGTASSIAGSLGTHVVNNTGATMPMAPILGVGTIPSLGVATS 480

Query: 481 LATVPAFPVL-SAGVQVPTVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIRDDVEE 540
           L +VPAFP L +AGVQVPTV ANLL VGTPSECLLLKNMFDPTAE EP FDMDIRDDVEE
Sbjct: 481 LVSVPAFPGLGAAGVQVPTVAANLLGVGTPSECLLLKNMFDPTAELEPTFDMDIRDDVEE 540

Query: 541 ECSRFGKLRHIFVDKNSAGFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDIPSYEA 600
           ECSRFGKL+HI+VDKNSAGFVYLRF NS++AMDAQRALNGRWFAGKMIGATFMDIPSYEA
Sbjct: 541 ECSRFGKLKHIYVDKNSAGFVYLRFANSEAAMDAQRALNGRWFAGKMIGATFMDIPSYEA 595

Query: 601 KFPDSR 603
           KFPDSR
Sbjct: 601 KFPDSR 595

[Close]

BLAST of Lag0001408 vs. ExPASy TrEMBL
Match: A0A1S3BIJ5 (RNA-binding protein 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490271 PE=4 SV=1)

HSP 1 Score: 964.5 bits (2492), Expect = 2.0e-277
Identity = 542/605 (89.59%), Postives = 562/605 (92.89%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHPSRSSKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGD EMKSGDKH SRS KYKSDGKDDGEHR    
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHR---- 60

Query: 61  KSEDVSKRSKSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKEDKERNRE 120
                SKRSKS+DESRD DRHRDRTSSRHRSRS  R+RDRD+HRSSKE RGK+D+E NRE
Sbjct: 61  -----SKRSKSDDESRDRDRHRDRTSSRHRSRS--RERDRDKHRSSKENRGKDDREGNRE 120

Query: 121 ERSSKDRDADRDKERAHDRDRRGRDGERERERERSRRSRSRSERHRSDRDESIRERSRDN 180
           ERSSKDRD DRDKER+HDRDRRGRDGER RERERSRRSRSRSERHRSDRD+ IRERSRDN
Sbjct: 121 ERSSKDRDVDRDKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDN 180

Query: 181 EFREREKERESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFF 240
           E REREKERESRERGRDGRRYK+KK+EAAEPEADPERDQRTVFAYQISLKATERDVYEFF
Sbjct: 181 ELREREKERESRERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFF 240

Query: 241 SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN 300
           SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN
Sbjct: 241 SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN 300

Query: 301 QVQSTSAAGGSGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDETG 360
           QVQSTSAAGG GG MGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDE+G
Sbjct: 301 QVQSTSAAGGPGGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESG 360

Query: 361 HCKGFGFVQFTRLEDAKNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGASTGDLDDEDGV 420
           HCKGFGF+QFTRLEDA+NALSLNGQLEIAGRTIKVSTVTDQPGLQD+GASTGDLD+EDG 
Sbjct: 361 HCKGFGFIQFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGG 420

Query: 421 GLSLNASSRASLMQKLDRTGTASSIAGSLGTH-VNNAGATLPMAPILGAATIPSL--ATP 480
           GLSLNASSRASLMQKLDRTG ASSIAGSLGTH VNN GAT+P APILG ATIPSL   T 
Sbjct: 421 GLSLNASSRASLMQKLDRTGAASSIAGSLGTHVVNNTGATMP-APILGGATIPSLGVGTS 480

Query: 481 LATVPAFPVLSAGVQVPTVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIRDDVEEE 540
           LA  PAFP L AGVQVP VTANLL VGTPSECLLLKNMFDPTAESEP FD+DIRDDVEEE
Sbjct: 481 LAAFPAFPGLGAGVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEE 540

Query: 541 CSRFGKLRHIFVDKNSAGFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDIPSYEAK 600
           CSRFGKL+HI+VDKNSAGFVYLRFE  +SA +AQRALNGRWFAGKMIGATFMDIPSYEAK
Sbjct: 541 CSRFGKLKHIYVDKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAK 593

Query: 601 FPDSR 603
           FPDSR
Sbjct: 601 FPDSR 593

[Close]

BLAST of Lag0001408 vs. ExPASy TrEMBL
Match: A0A0A0K4Q5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014530 PE=4 SV=1)

HSP 1 Score: 964.5 bits (2492), Expect = 2.0e-277
Identity = 541/605 (89.42%), Postives = 563/605 (93.06%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHPSRSSKYKSDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQKVKETANGGD EMKSGDKH SRSSKYKSDGKDDGEHR    
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGEHR---- 60

Query: 61  KSEDVSKRSKSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKEDKERNRE 120
                SK  KS+DESRD DRHRDRTSSRHRSRS  R+RDRDRHRSSKE RGKED+E NRE
Sbjct: 61  -----SKHLKSDDESRDRDRHRDRTSSRHRSRS--RERDRDRHRSSKENRGKEDREGNRE 120

Query: 121 ERSSKDRDADRDKERAHDRDRRGRDGERERERERSRRSRSRSERHRSDRDESIRERSRDN 180
           ERSSKDRD DRDKER+HDRDRRGRDGER RERE+SRRSRSRSERHRSDRD+ IRERSRDN
Sbjct: 121 ERSSKDRDVDRDKERSHDRDRRGRDGERNREREQSRRSRSRSERHRSDRDDGIRERSRDN 180

Query: 181 EFREREKERESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFF 240
           E REREKERESRERGRDGRRYK+KK+E AEPEADPERDQRTVFAYQISLKATERDVYEFF
Sbjct: 181 ELREREKERESRERGRDGRRYKDKKDETAEPEADPERDQRTVFAYQISLKATERDVYEFF 240

Query: 241 SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN 300
           SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN
Sbjct: 241 SRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKN 300

Query: 301 QVQSTSAAGGSGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDETG 360
           QVQSTSAAGG GG MGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMP+DE+G
Sbjct: 301 QVQSTSAAGGPGGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESG 360

Query: 361 HCKGFGFVQFTRLEDAKNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGASTGDLDDEDGV 420
           HCKGFGF+QFTRLEDA+NALSLNGQLEIAGRTIKVSTVTDQPGLQD+GASTGDLD+EDG 
Sbjct: 361 HCKGFGFIQFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGG 420

Query: 421 GLSLNASSRASLMQKLDRTGTASSIAGSLGTH-VNNAGATLPMAPILGAATIPSLA--TP 480
           GLSLNASSRASLMQKLDRTG ASSIAGSLGTH VNN GAT+P APILG ATIPSL+  T 
Sbjct: 421 GLSLNASSRASLMQKLDRTGAASSIAGSLGTHVVNNTGATMP-APILGGATIPSLSVGTS 480

Query: 481 LATVPAFPVLSAGVQVPTVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIRDDVEEE 540
           LA  PAFP L AGVQVP VTANLL VGTPSECLLLKNMFDPTAESEP FD+DIRDDVEEE
Sbjct: 481 LAAFPAFPGLGAGVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEE 540

Query: 541 CSRFGKLRHIFVDKNSAGFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDIPSYEAK 600
           CSRFGKL+HI+VD+NSAGFVYLRFE S+SAM+AQRALNGRWFAGKMIGATFMDIPSYEAK
Sbjct: 541 CSRFGKLKHIYVDRNSAGFVYLRFEKSESAMEAQRALNGRWFAGKMIGATFMDIPSYEAK 593

Query: 601 FPDSR 603
           FPDSR
Sbjct: 601 FPDSR 593

[Close]

BLAST of Lag0001408 vs. TAIR 10
Match: AT2G16940.1 (Splicing factor, CC1-like )

HSP 1 Score: 602.4 bits (1552), Expect = 3.9e-172
Identity = 377/610 (61.80%), Postives = 454/610 (74.43%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETAN-GGDAEMKSGDKHPSRSSKYKSDGKDDGEHRSKR 60
           MDFDEY+YLEKTVENP  +   E  N GGD ++KS  K  SRSS+++ D K         
Sbjct: 1   MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRSSRHRGDKK--------- 60

Query: 61  SKSEDVSKRSKSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKE-DKERN 120
                     K  DE  D  R   R+ S HRSRS  RDR+RDRHRSS+E+R ++ +K+ +
Sbjct: 61  ----------KERDEDED-GRRSKRSRSHHRSRS--RDRERDRHRSSREHRDRDREKDVD 120

Query: 121 REERSSKDRDADRDKERAHDRDRRGRDGERERERERSRRSRSRSERHRSDRDESIRERSR 180
           +EER+ KDR+ DRDK    DRD +GRD     E++RSRRSRSRSERHRS      RE+S 
Sbjct: 121 KEERNGKDRERDRDK----DRDSKGRD----HEKDRSRRSRSRSERHRSQE----REKSL 180

Query: 181 DNEFREREKERESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYE 240
           + E     KERE+++R RD RR+K+KKE+  EPEADPERDQRTVFAYQI+L+ATERDVYE
Sbjct: 181 EIE----PKERETKDRDRDRRRHKDKKEDKVEPEADPERDQRTVFAYQIALRATERDVYE 240

Query: 241 FFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAE 300
           FFSRAGKVRDVR+IMDR SRRS+G+GYVEF D MSVPMAIALSGQ LL QPVMVKPSEAE
Sbjct: 241 FFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAE 300

Query: 301 KNQVQSTSAAGGSGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDE 360
           KN VQST+AA G+GG++GPYSGGARRLYVGNLH N++ED+LR+VF +FG+VELVQ+P DE
Sbjct: 301 KNLVQSTTAAAGAGGMLGPYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDE 360

Query: 361 TGHCKGFGFVQFTRLEDAKNALSLNGQLEIAGRTIKVSTVTDQPGLQDIG--ASTGDLDD 420
           TG CKGFGFVQF RLEDA+NAL+LNGQLEIAGR IKVS VTDQ  + + G   +TGDLDD
Sbjct: 361 TGLCKGFGFVQFARLEDARNALNLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDD 420

Query: 421 EDGVGLSLNASSRASLMQKLDRTGTASSIAGSLGTHVNNAGATLPMAPILGAATIPSLAT 480
           +DG GLSLNA SRA LMQKLDR+GTASS   +     N            G +TI SLA 
Sbjct: 421 DDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASFNG-----------GVSTISSLAA 480

Query: 481 PLATVPAFPVLS----AGVQVPTVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIRD 540
           P     +FP ++    +G+    + A    +G PSECLLLKNMFDP+ E+E +FD DI++
Sbjct: 481 PALVQGSFPAVAGLAGSGIIPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKE 540

Query: 541 DVEEECSRFGKLRHIFVDKNSAGFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDIP 600
           DV+EECS+FGKL HIFVDKNS GFVYLRFEN+Q+A+ AQRAL+GRWFAGKMI AT+M   
Sbjct: 541 DVKEECSKFGKLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTE 559

Query: 601 SYEAKFPDSR 603
           +YEAKFP+S+
Sbjct: 601 AYEAKFPESK 559

[Close]

BLAST of Lag0001408 vs. TAIR 10
Match: AT2G16940.3 (Splicing factor, CC1-like )

HSP 1 Score: 579.3 bits (1492), Expect = 3.5e-165
Identity = 377/648 (58.18%), Postives = 454/648 (70.06%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETAN-GGDAEMKSGDKHPSRSSKYKSDGKDDGEHRSKR 60
           MDFDEY+YLEKTVENP  +   E  N GGD ++KS  K  SRSS+++ D K         
Sbjct: 1   MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRSSRHRGDKK--------- 60

Query: 61  SKSEDVSKRSKSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKE-DKERN 120
                     K  DE  D  R   R+ S HRSRS  RDR+RDRHRSS+E+R ++ +K+ +
Sbjct: 61  ----------KERDEDED-GRRSKRSRSHHRSRS--RDRERDRHRSSREHRDRDREKDVD 120

Query: 121 REERSSKDRDADRDKERAHDRDRRGRDGERERERERSRRSRSRSERHRSDRDESIRERSR 180
           +EER+ KDR+ DRDK    DRD +GRD     E++RSRRSRSRSERHRS      RE+S 
Sbjct: 121 KEERNGKDRERDRDK----DRDSKGRD----HEKDRSRRSRSRSERHRSQE----REKSL 180

Query: 181 DNEFREREKERESRERGRDGR-----------------------------RYKEKKEEAA 240
           + E     KERE+++R RD R                             R+K+KKE+  
Sbjct: 181 EIE----PKERETKDRDRDRRFILMLLGPLVLPSVQLDGALPCRDFSCFIRHKDKKEDKV 240

Query: 241 EPEADPERDQRTVFAYQISLKATERDVYEFFSRAGK---------VRDVRLIMDRNSRRS 300
           EPEADPERDQRTVFAYQI+L+ATERDVYEFFSRAGK         VRDVR+IMDR SRRS
Sbjct: 241 EPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVCPFLCRFHVRDVRIIMDRISRRS 300

Query: 301 KGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGSGGVMGPYSG 360
           +G+GYVEF D MSVPMAIALSGQ LL QPVMVKPSEAEKN VQST+AA G+GG++GPYSG
Sbjct: 301 RGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSG 360

Query: 361 GARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDETGHCKGFGFVQFTRLEDAKNAL 420
           GARRLYVGNLH N++ED+LR+VF +FG+VELVQ+P DETG CKGFGFVQF RLEDA+NAL
Sbjct: 361 GARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNAL 420

Query: 421 SLNGQLEIAGRTIKVSTVTDQPGLQDIG--ASTGDLDDEDGVGLSLNASSRASLMQKLDR 480
           +LNGQLEIAGR IKVS VTDQ  + + G   +TGDLDD+DG GLSLNA SRA LMQKLDR
Sbjct: 421 NLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDR 480

Query: 481 TGTASSIAGSLGTHVNNAGATLPMAPILGAATIPSLATPLATVPAFPVLS----AGVQVP 540
           +GTASS   +     N            G +TI SLA P     +FP ++    +G+   
Sbjct: 481 SGTASSTGLTTAASFNG-----------GVSTISSLAAPALVQGSFPAVAGLAGSGIIPG 540

Query: 541 TVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIRDDVEEECSRFGKLRHIFVDKNSA 600
            + A    +G PSECLLLKNMFDP+ E+E +FD DI++DV+EECS+FGKL HIFVDKNS 
Sbjct: 541 VIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSV 597

Query: 601 GFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 603
           GFVYLRFEN+Q+A+ AQRAL+GRWFAGKMI AT+M   +YEAKFP+S+
Sbjct: 601 GFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPESK 597

[Close]

BLAST of Lag0001408 vs. TAIR 10
Match: AT2G16940.2 (Splicing factor, CC1-like )

HSP 1 Score: 576.6 bits (1485), Expect = 2.3e-164
Identity = 372/651 (57.14%), Postives = 456/651 (70.05%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETAN-GGDAEMKSGDKHPSRSSKYKSDGKDDGEHRSKR 60
           MDFDEY+YLEKTVENP  +   E  N GGD ++KS  K  SRSS+++ D K         
Sbjct: 1   MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRSSRHRGDKK--------- 60

Query: 61  SKSEDVSKRSKSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKE-DKERN 120
                     K  DE  D  R   R+ S HRSRS  RDR+RDRHRSS+E+R ++ +K+ +
Sbjct: 61  ----------KERDEDED-GRRSKRSRSHHRSRS--RDRERDRHRSSREHRDRDREKDVD 120

Query: 121 REERSSKDRDADRDKERAHDRDRRGRDGERERERERSRRSRSRSERHRS-DRDESIRERS 180
           +EER+ KDR+ DRDK    DRD +GRD     E++RSRRSRSRSERHRS +R++S+    
Sbjct: 121 KEERNGKDRERDRDK----DRDSKGRD----HEKDRSRRSRSRSERHRSQEREKSLEIEP 180

Query: 181 RDNEFREREKER-----------------------------------ESRERGRD----- 240
           ++ E ++R+++R                                   E   R        
Sbjct: 181 KERETKDRDRDRRYTSELVIDFIIYVHWYCLLYNLMGHVPFKIIIVIEGTSRASCVYAYW 240

Query: 241 GRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRNS 300
            +R+K+KKE+  EPEADPERDQRTVFAYQI+L+ATERDVYEFFSRAGKVRDVR+IMDR S
Sbjct: 241 RKRHKDKKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRIS 300

Query: 301 RRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGSGGVMGP 360
           RRS+G+GYVEF D MSVPMAIALSGQ LL QPVMVKPSEAEKN VQST+AA G+GG++GP
Sbjct: 301 RRSRGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGP 360

Query: 361 YSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDETGHCKGFGFVQFTRLEDAK 420
           YSGGARRLYVGNLH N++ED+LR+VF +FG+VELVQ+P DETG CKGFGFVQF RLEDA+
Sbjct: 361 YSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDAR 420

Query: 421 NALSLNGQLEIAGRTIKVSTVTDQPGLQDIG--ASTGDLDDEDGVGLSLNASSRASLMQK 480
           NAL+LNGQLEIAGR IKVS VTDQ  + + G   +TGDLDD+DG GLSLNA SRA LMQK
Sbjct: 421 NALNLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQK 480

Query: 481 LDRTGTASSIAGSLGTHVNNAGATLPMAPILGAATIPSLATPLATVPAFPVLS----AGV 540
           LDR+GTASS   +     N            G +TI SLA P     +FP ++    +G+
Sbjct: 481 LDRSGTASSTGLTTAASFNG-----------GVSTISSLAAPALVQGSFPAVAGLAGSGI 540

Query: 541 QVPTVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIRDDVEEECSRFGKLRHIFVDK 600
               + A    +G PSECLLLKNMFDP+ E+E +FD DI++DV+EECS+FGKL HIFVDK
Sbjct: 541 IPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDK 600

Query: 601 NSAGFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR 603
           NS GFVYLRFEN+Q+A+ AQRAL+GRWFAGKMI AT+M   +YEAKFP+S+
Sbjct: 601 NSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPESK 608

[Close]

BLAST of Lag0001408 vs. TAIR 10
Match: AT5G09880.1 (Splicing factor, CC1-like )

HSP 1 Score: 471.5 bits (1212), Expect = 1.0e-132
Identity = 330/602 (54.82%), Postives = 398/602 (66.11%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHPSRSSKYKSDGKDDGEHRSKRS 60
           M+FDEY+YLEKTVE   G   K+         +SG++   RS + +  G+  GE   +  
Sbjct: 1   MEFDEYEYLEKTVEEGAGSNKKKE--------ESGNERSERSYRKREGGERQGEEGGEEE 60

Query: 61  KSEDVSKRSKSEDESRDHDRHRDRTSSRHRSRSRDRDRDRDRHRSSKEYRGKEDKERNRE 120
           +    SK+S+ + E     + RDR   RHRS SRD+DR+RD+ R      G  DKE +R 
Sbjct: 61  RVSSRSKKSRGDGEENGGGK-RDRERERHRS-SRDKDRERDKVR-----EGSRDKESDR- 120

Query: 121 ERSSKDRD-ADRDKERAHDRDRRGRDGERERERERSRRSRSRSERHRSDRDESIRERSRD 180
           ERSSK+RD +DRDK R  DR+R          RER +RS SRS                 
Sbjct: 121 ERSSKERDRSDRDKPR--DRER----------REREKRSSSRS----------------- 180

Query: 181 NEFREREKERESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEF 240
              R  EKE E  ERG   RR+++KK+   EPEADPERDQRTVFAYQ+ LKATERDVYEF
Sbjct: 181 ---RREEKEPEVVERG--SRRHRDKKD---EPEADPERDQRTVFAYQMPLKATERDVYEF 240

Query: 241 FSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEK 300
           FS+AGKVRDVRLIMDRNSRRSKGVGY+EF D MSVPMAIALSGQL L QPVMVKPSEAEK
Sbjct: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLFLGQPVMVKPSEAEK 300

Query: 301 NQVQSTSAAGGSGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLD-E 360
           N  QS S   G  G         R+LYVGNLH N++E  LRQ+F AFG VELVQ+PLD E
Sbjct: 301 NLAQSNSTTVGGTG------PADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPE 360

Query: 361 TGHCKGFGFVQFTRLEDAKNA-LSLNGQLEIAGRTIKVSTVTDQPGLQDIGASTGDLDDE 420
           TG CKGFGF+QF +LE +K A ++LNG+LEIAGRTIKVS+V+D  G QD    + D DD+
Sbjct: 361 TGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKVSSVSDHIGTQDSAPKSADFDDD 420

Query: 421 DGVGLSLNASSRASLMQKLDRTGTASSIAGSLGT-HVNNAGATLP-MAPILGAATIPSLA 480
           DG GL+LNA SRA LMQKLDR+G A+SI GSLG   +N A    P M P     + P+  
Sbjct: 421 DGGGLALNAQSRAMLMQKLDRSGIATSIVGSLGVPGLNGAAFNQPGMNP-----SFPTSV 480

Query: 481 TPLATVPAFPVLSAGVQVPTVTANLLSVGTPSECLLLKNMFDPTAESEPNFDMDIRDDVE 540
            P   +P+F           V  +   VG PSECLLLKNMFDP  E+EPNFD++IRDDV 
Sbjct: 481 LPTTAIPSF-----------VNEH---VGLPSECLLLKNMFDPATETEPNFDLEIRDDVA 524

Query: 541 EECSRFGKLRHIFVDKNSAGFVYLRFENSQSAMDAQRALNGRWFAGKMIGATFMDIPSYE 598
           +ECS++G + HI+VDKNSAGFVYLRF++ ++A  AQRA++ RWFA KMI ATFM    YE
Sbjct: 541 DECSKYGPVNHIYVDKNSAGFVYLRFQSVEAAAAAQRAMHMRWFAQKMISATFMPPHEYE 524

The following BLAST results are available for this feature:

BLAST of Lag0001408 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136109.1	9.0e-280	89.93	RNA-binding protein 39 isoform X2 [Momordica charantia]	[more]
XP_022136108.1	6.4e-278	89.20	RNA-binding protein 39 isoform X1 [Momordica charantia]	[more]
XP_022969035.1	4.2e-277	88.94	RNA-binding protein 39 [Cucurbita maxima] >XP_022969036.1 RNA-binding protein 39...	[more]
XP_008447936.1	4.2e-277	89.59	PREDICTED: RNA-binding protein 39 isoform X1 [Cucumis melo] >XP_016900486.1 PRED...	[more]
XP_011658601.1	4.2e-277	89.42	RNA-binding protein 39 isoform X1 [Cucumis sativus] >XP_031744308.1 RNA-binding ...	[more]

BLAST of Lag0001408 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5RC80	3.2e-62	38.92	RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 SV=1	[more]
Q8VH51	7.1e-62	38.55	RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2	[more]
Q14498	9.3e-62	38.55	RNA-binding protein 39 OS=Homo sapiens OX=9606 GN=RBM39 PE=1 SV=2	[more]
O13845	3.3e-35	29.00	RNA-binding protein rsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...	[more]
Q86U06	2.1e-29	35.18	Probable RNA-binding protein 23 OS=Homo sapiens OX=9606 GN=RBM23 PE=1 SV=1	[more]

BLAST of Lag0001408 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C3C8	4.3e-280	89.93	RNA-binding protein 39 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007883...	[more]
A0A6J1C6Q3	3.1e-278	89.20	RNA-binding protein 39 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007883...	[more]
A0A6J1HYU3	2.0e-277	88.94	RNA-binding protein 39 OS=Cucurbita maxima OX=3661 GN=LOC111468152 PE=4 SV=1	[more]
A0A1S3BIJ5	2.0e-277	89.59	RNA-binding protein 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490271 PE=4 S...	[more]
A0A0A0K4Q5	2.0e-277	89.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014530 PE=4 SV=1	[more]

BLAST of Lag0001408 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16940.1	3.9e-172	61.80	Splicing factor, CC1-like	[more]
AT2G16940.3	3.5e-165	58.18	Splicing factor, CC1-like	[more]
AT2G16940.2	2.3e-164	57.14	Splicing factor, CC1-like	[more]
AT5G09880.1	1.0e-132	54.82	Splicing factor, CC1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 221..293 e-value: 5.9E-16 score: 69.0 coord: 509..587 e-value: 2.1E-7 score: 40.6 coord: 324..396 e-value: 9.4E-25 score: 98.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 532..583 e-value: 1.3E-5 score: 24.9 coord: 325..394 e-value: 6.5E-21 score: 73.9 coord: 230..288 e-value: 2.4E-10 score: 40.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 220..297 score: 14.675204
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 323..400 score: 19.314274
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 508..591 score: 9.115145
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 509..587 e-value: 0.38 score: 18.5 coord: 324..396 e-value: 0.48 score: 17.5
IPR029123	Splicing factor RBM39, linker	PFAM	PF15519	RBM39linker	coord: 414..525 e-value: 3.5E-21 score: 76.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 306..403 e-value: 1.6E-24 score: 88.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 213..305 e-value: 3.6E-21 score: 77.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 503..602 e-value: 2.4E-30 score: 106.8
IPR006509	Splicing factor, RBM39-like	TIGRFAM	TIGR01622	TIGR01622	coord: 113..600 e-value: 1.5E-158 score: 526.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..218
None	No IPR available	PANTHER	PTHR48036	SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED	coord: 1..598
None	No IPR available	PANTHER	PTHR48036:SF5	CC1-LIKE SPLICING FACTOR	coord: 1..598
None	No IPR available	CDD	cd12285	RRM3_RBM39_like	coord: 507..590 e-value: 2.06543E-38 score: 134.209
None	No IPR available	CDD	cd12283	RRM1_RBM39_like	coord: 221..293 e-value: 5.51038E-43 score: 146.597
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 213..321
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 323..588

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0001408.1	Lag0001408.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding