Lag0001378 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0001378
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionDihydroxy-acid dehydratase
Locationchr4: 30424283 .. 30432578 (+)
RNA-Seq ExpressionLag0001378
SyntenyLag0001378
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCATGCATCACCAAGTTCCTCAACTCTTCTTCTTATTTTCATTTCGTTTGGCCAGCACTTATCTTTCTCAACTTCGATGCTGTCTCCAAGCATTCTCTGGCGAGCGGCGCCGTAGCAGCAGTTTAGGGCAGTTCGTCGATGTGGGTTTGCAGCAGTTTTTCAACGTGGTTTTGGGTAAGTTTCTCGCAAGTTTTTCATCCTCTAGGCCTGATTCCTTTCCCTCTTTCTTTCTAAATCTCTCACCCTCTATTTTTTTGACGAGTTTCAAGCATGGAAGGGGTTAATTTTTGCGTGTTTCCGACGGGAGTACAGTTTATGCGCAAACAGCAGCGTGGTGGCTCGTTTTTGGGCGTTTTCGTCAAGCTTTCGGCATGGGTAAGTTGGATTGAAGGTTATATTGGTTGGTTATCATGTTTAATCGAATACCCACTCATTTTTGTTTTCGTTCAACAAGCTTTTCCCTTCAATTTTGACGATTCAAAGCAGTGTGTCTTCGAGTTTCAATGTCTTTAAGCAACTTCGGCATTGGGTAAGTGTTTTGCACCAAGGTTTGGGGTTGATTTTAGTGTTTATTCAATTGCCCATTAATGTTAGCTTTCAAATTCAAGGTACCCATAATATTTGGAGGTTTAATCGTGTTGATTAGGAGCTATATTGGAACTCGGACAACAAGTTGTGTTTTGTTTTTGGGTAAGTTTTGGGTGTTAAAGCACCCACAAATTTAATTGGCTCCTAGTTGAATGTTTGTGTTAGAACCCCTATTGATTTTAGAAGTTTATCCCCTTTTGTGTAGCTTGATTAAGGACCTTGGAGCTAGAGTATTCATTTGGATTTTATCAAGCTAAGCAATCCATTTGGCTAAGGTAAGTATCCATTGGATTAAGTTTTATGTTTGGACCGATTTAATCGAAAGGTTATTATATTAGCATGATTTGGTTTTAAGTCTAAGTTTTGTCCTTGAATTTAATTAAGCATGAATGGTTCATCTTGAAGCATGAAAATAGTATGAGAGTTATTTGGTTGTATGAATTTTCCCCTTTTCTGTAGCTTGCTTTAAGCCATGGAATTAAGAAATTTGTCAAAGGATTATCAAGATTAATTAAGCCAACGTAAGTGGCTTTACTACTGGAATGCTTAGGCTAGGTTGGAAAATTGTGTGATGATAGGATAGAACTTGCATGAAATTCTATGAATGTGAAACATGAACCATGAATTTATTGAATGTGTAGACCATGATTTAATTTAGAGGAAAAACTATGAAATTATCTTGTGCTTATGCATGATTGAGGATATATATGTTGCATTCTATGAGTGTATGATGTTTTGTTATGGGATCCATGCATATGTATGATTCATGATATTAAAAGAACCATGTTCATGGCAATTACCCTTAGAGGAAATTGATGTACATAGAGGAACCTGAGGTACTATAGGCAAGATTCGACCCTACTAATTAGGTGTCAAATGACTATTAGATGGGGCACATTCTCGAGAGGATGCTTATTCTATCTCTTAGTTGGGAGAGGAACTCGAGGTAACTTAGGCGAGATTCGACCCCTCTAACTAGGTGTCAACTGACTATTAGATAGGGCACATTCTCTAGAGGATGCCTACTTACCTCTTAGTTGGTAGAGGAACATAGGAAGGGTAATTGTCCATGTTAAGGCCTTAAAAGAAATTCATAATTAAGAGAAAAGAGGAATAAGGTCACACTAGAAATGCATGAACCATGATCACTAGAATAGCATGAACCATGTTGTATGTGTTTGCATATCTTGACCCCAGTAGTGGGGTTACTTACTAGGTATTTTAAATACTCATTCTTTCCATGAATGTTTTTTTTTTTCAAGTAAAAGCAAGGGTGTGTGATGGCTGTTGATGAGAAGCTATTATAGGCAGCCATGGGAGATTAGGACACATGAACTTCACATTTTCTTCTGCTTTATGAACTACGTTTTACATTCTTTTGGTTTATGAACTTGTTTTGAGAACTCCTTAGAGGTCATGTTTGCTTTTAGTTTGAAGGGAAAAATACACTTTTGGTCCCTGAGGTTTGGGTTAAGTGACACTTTGGTCCCCGAGTTTTCAAACTCAACAAAAATACCCCCGAGGTTTGAGATAAGGAGCAATTTGGTCCCTGCCGTCAATTTTTCTGTTAAACCCTAACGGTAAGCTGACGTGGCACTATTATTTTAATTAAAAAAATTAATTTTTAATTTTTTTAAATAAAAAATATAAAAATATTAAATATATTATTATTTTATTATTATTTTTAAAATTCTTTCTCTTTTTCCCATCTTCTTTCTTCTCCACCTTCTTTCTCCCTCCATCTTCTTCCTTCCCCCTCCCATCTTCTTCAGCTCCGGTGGCCGGCCGCCGCCGGCTGCCGGCGAACGGCGGCGGTCGCCGGAATTTTTTTTTTTTCTTCTTCTTTCTTCTTCTTTTCTTCTTCTCTTCTTCCCTTCTTCTTCTTTCTCTTCCTTTCTTCTGTTTTTTTTTTTTAAGAAGAGAGTTTCGGGGAGGAGGAGCTCCTCCTCCCCTTCCCGTTTCAGATCTAAAAAGCTCCTCCTCCCCCTCCCGTTTCAGATCTGAAACGGGAAGGGGAGGAGGAGCTCCTCCTCCCCGAAACTCTCTTTTTTAAAAAAAAAAAAACAGAAGAAAGGAAGAGAAAGAAGAAGAAGGGAAGAAGAGAAGAAGAAAAGAAGAAGAAAGAAGAAAAAAAAAAAATTCCGGGAAAGACGCTGGCTGAAAATGCTAAAATGTTCCTACCTCTATCTGAAGGGCAGGTATGATGGCTTTGATATTATTGCATCCACGATTTCAGAATTCGGATTATGCTTCTAAACTATTTAAGTAATTGTGAACGTTTGTTTCTGGTTTTCGGTTCAGCTATTTCTTTCCTCACCCCTGTCCCAACATAGAAAAGAGTAATCGCCTCCAGAAGTTAAAAGGAAAATTAACTTAATAGAGGTGAAAATCTGAAGGAACACTTCATAACTACCTCTTGTGCTTTTTTAATGTAGGATATTATTAAACCCTTGGAGAATCCCATCAAGAAGACAGGGCACCTTCAAATATTATATGGAAATCTTGCTCCCGAGGGTTCAGTAGCTAAGATTACTGGCAAGGAGGGGCTATATTTCTATGGTACTGTTTACTGAGCTTTCAAGATGCTTTATGAACCAGAAATGTCATTTACGGTTAAACTTTTTGATTAAGAAAATATTGTGTGTTTCTTTCCTTTAAAAAAAGGAGGAAACAACTAACTTTTCATTTAACAACTGCTTCGGCCACTCCTTTTGTATTGAGAAAACTGACTGTGTTGTGGTTCTGAATCTCATCGTTTATCAGAATATTCATCCTCGGGCCTCCCTCCTCCCTCCCTTTTCTATTTTTTTAAAAAAAAACATTGAAGAAAAAGAAGAGAAGAAGAAAGAAAGGAAGAAGAAGAAAGAAGAAAGAAGAAAGAAGAAAAAAAAAAAAAAAGTCACCGGCGGCCGGCGGCGGCGGCGTGTGGTGGTCGCCGGTCGCCGGACTTAGGAAGAAGAAGAAGGAGAAGGGAGAAGATGGAGAAGAAGGAAGATGGAGAAGAAGAAGATGAGAGAGAAGGAGAGAAAGAATAAAAAAAATAATTAAATATTAATTTTTTAATTTTTTAATATTTTTTATTTAAAAAATAAAACAAAAATAATTTTTTATATTAAAATAATAGTGCCACGTCAGCAACCGTTAAAAGTTAACAGAAAATTTGACGGCAGGGACCAAAGTGCTCCTTATCTCAAACCTCAGGGGTATTTTTGTTGAGTTTGAAAACTCAGGGACCCAAGTGTCACTTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCTAGTTTGAAAGTTATTTGAGAATATTTTGTGACTTTAAAGTTAGGGATCCTGAATAAAGGTTTTTACTTAAATTTGAGTTTTTGTTTCAAAATATTTTATTTCGAAAGGCCTCCATAGCATGCATGTGGTAACGGGCTCGAATAGTTCATTATTGAAGTTGGGTCGTTACACCAATAAAGTGTTTTTAACCAATAAACATTTAAATCAAATTAGATATCAAACTTTTATTTCTGAGATGGGTGTTCACACGTAAATTCAAAAGAATGAGACACGTGGAGTAAATTTGTATTTGTATTGTTGTGGTGGGTGTAGTAGTACAATCTCTAATACATAATCTTCCGATTCTCTCTCTTGTGTGTGTGTTTCACTCGAGGGTTGAAATGTTTGTTCTTGAATTTGAAGTCGTCTCACGGGCTTTGCAACTTGTTCTTGAGATTGAAGTCGTCTCAATCTATTTATAGAGTTCTCCATGGACATGAGCTTGGGTTTCATTGACTTTGGACTTGGCTCATTGAACTCGGGCTTAGCCCATTGGACTTGGGCTCATTGATCTTGGGCCAAGTCATTTGGACTTGGGTTTTACTGACTTTGGGCCTAGTCATTTGGATTTGGGTTTGACTTAAACTTGACCCAAATACCATAAAACCCAAACACCGTATGACCCAACTTTAATCAAATTAAAGTTTTATTATTTGATCAAATTGTCGTATTCAAAACAACTAGCATTACAATTTAAGATTTGTTAACTTTGTCTTCCAATTAAATTTGAGACATATATCAACTTATAATTGGTCTTGAATTTAATTATTTGTAATTTCGTTATTAATTTTGGATAACAACATGACATCTTGTGATTGGCCGAAATTTCTCCTTCAACAATGGGAATTTTAGGTACAATCTACATGGTACCCAACAAATGTTATTAAAGAAAAACAAAGAACGTGATGTATGACTTAGCCTTGCAATTTTTCATACTGTATATTCCTTAATTTTCCAATTTCATTTTTTCTCAATCAATTAAATGCCCTTCCAATATTAGATTTCTACAATTTAAGGAGCCAAGAATTCTAGAAATAAAAAGTAAGATTGGTTAAATGCAATTTAAGGCTTAGTAAAAAAATTATGTTGGAAAAAAACTTATATCCAACAAGTTTTTATTATTTCAATTTAAATAGATGAAAGATGAGAATAATGGTAAATCACGTTCTTGCCATGGATATAAAAGCATAAAATCATATGTGTTGAGCAAACGTGTTGATGAAGTTCAATCGGGGATTCAAACTTTGTTAATTTGGGGTTCGTTTCGTAATGTTTTCTTTTCTTGTGTCTTATTTCTCTTATCAAGTTTTCTCTTGTTTAACAAGGAAAAACATAATTGTGTTCTGTTACTCTTTCTTCTTTATCTTGTTTCTTTTATTATTCGGAAAATATTAAACTTGTTTGGTAATACTTTCTAGTTTTTTCTTCTCTAAAATTTTTACAATACAAATATAAAGGATTTTTTTTTTTTTTTTCCTTTTGACAACTTATTCCACTACTACAAATTGGGGAATCTTTGACACCAAGGGAAAAGGAAATAAAGTTTAGGGAGGGAAAAAAGTGTCATAAGATGTAAGAGGCACATTTTTGGCGGGAAAAGTGGAGATTTTTGTATTCAAGCTTGTTCTCACTCATTGGCCTTGCTTCAGCTCCCACAGAATGTCCCTTGGCGAAATTAGGTCTAAAAACTCCCAAATTGAACTTCCCTTTCTCGTGCAAGATCACATTCTTTATATACTAAATCTGTCGACAGCGTCGAGACGTTAGGGACATCGACTTGACGCTACCTCTCCGGTCTGCATACTATTTAAGCTTCCATTTTTAGTCTTTTTCATTTCTTTTGCTTTTCTTTAGGTCCCGAGCACCTGATCAACTCCAATTTCTCCAATTTAACTTCAATATTCAATTCCTACAAAAAAAAAAAAAACATAAAAGTGTATGATTTTGGCCAATTTATTCTCAAAGACTAACAAATAAACATAGGGGAAAATAGTTTGTTAGACGCAGTACTAGTGATTAGTTGCCCTTTATAAATTATAAGCAAGTCATTTAATTCTTATATTTTTGTTTCATTAAAAAAAAATTAAATACAATATTCCCCTCTATATAAACTCCACATCACACCATCCGTTAAGAAACACACATAAACTTCTTCTTTCTTTCACATCCCGTATACACAAAACTTCTCCCTATCATGGCTTGCCTTCTAAAGTTTGTTATTCTCTTGTCATTCCTATCGATTGCCTTCTCGTTAGGGGTGTACATGGGTTGCGTTGGGTTGGGTTGAGGGGATTTTTTGGACCAACCCGAAATTCGGGTTGGTCAGATTGACGACTCGAAAGAACTGAATAAAGTTAGCAACCCAACCCAACCCAACCCTTTTATTTCGGGTTGGGTTGGGTCGGGTCACCGGGTTGTTCGATTTTTTTTAAAAAATAAATTAAACTCAAATCCCAATTTCCAATTTTAAAATACACCAAATTCAATATTTCCCTCTAACCCTAACACAAAATACATATTTCTATCCACCAACACAAAATTAAAATCAAAGAAACCTTATTCCAAAAATAGAATATTGATTTTAAAACAATTTTAAAAAAACAGCAATAAAAACAAATAAAATATATAAAGAAATATGTGAAAAAAAATAAAGTTAGAATAATTTTTCTTTTAAGAAAAACAAGTTCTAAAAAAGCTGCAAAAAAAAAACACACACATATATATATATATAATTTGTTTTAAAAAAATAAGAAATTCGGTTCGGTTTGGGTTCAACCCAACCTAAGAAAACCCAACCCGAGAACCGAATCAAATTTTAGGTTTTGAAAAAAACCAACACAAGCCAAACCGAAAAAATTTCTAACCCAAACCAACCCTTACGATTTCGGTTGGGTTGTCTGGGTTGTTCGGGTCATCGGGTTACTTGTACACCCCTACTTCTCATCTATGGAAAAATCTAAACAGGCCCTGAATGTGAACCTAGCAACACGATCAAAGTTCGAAGAGGAGAAAATTTATTGTTTAGTACATTTATTGAGACTCCATGCATGTATATGAAGGAGGTTGTCATGTTCTTCCTTCATGGAAAACCAACTAAAGTGTCAACTGGTGTGAAACAATCAAGAGTATTCTGCACGAGTGTTGGCCACGATTGCTCAACTCCGTTGGAATTACAGCAAAACAAGGTAGCATTCTTACATCCTATTGTGATATGGCTATTGCCCATGAAGTAAAGATTATGCTCATTGGAAAGAAAAATGATCTTTGTAATAGAATAATAATATGTGTGGGACTCAAGCTATATATTATAAGTTTATGGTTAATATTGTTATGGGTTATGTGAGTTTGAAGTGTGTGAATCAAAGTAATAAAAAAAAAAGGAAAATACGCTTTTGGTTCCTAAGTTTTCAAACTCAACAAAAATACCCCTGAGGTTTGAGATAAAGAGCAATTTGGTCTCTGCCATCCATTTTACCGTTAAATCCTAACGGCAGCTGATGTGGCACTATTATTTTAATTAAAAAAATGAATTTTTAATTTTTTAAATAAAAATATATTAAAATAATAAAAATATTATTATTTTTAAAATTCTTTCTCTCTCTCTTTCTTCTTTCTTTCTCCATCTCTTCTTCCTTCCCCATCTCCTTTTTCTTCAGCTCCGCTAGAATTTTTTTTTATTATTTTTTTTGTAACGCCCCAGGCCTAGGATTCGGAATCCGGATTCGGCACTTAAGGCCCTGACATTCCAAGACTGTCCCCACAAACCAACACGGGGTCCTTTTAGCATGCTTTGTCCTCACTCACATGCTTCCTAGGAAAATTCCCAGGAGGTCACCCAACATAGAACTTCTCCAAGCCAAGCACGCTTAACTTTAAAGTTCCTATGATTGAGCCACCGAAAAGGAAGGTGCACCTTGTTTTGTATAGGTAGTATCTATCAATTCTTTTAAGCTTATCTTGAACATACTTTCATGTCCTCAAGATCCCTCTCATTCGGATGTGGCCTCGGTTCATTCATGTACCCCTCCTAACTCGGGTGTTACATTTTTCCTTCTTTCTTCTTCTTCCCTTTTTCTTCCATTCTTCTCCTTTCTTTTCTTTCTTCTGTTTTTTTTTTTAATAGAGGGAGTTTCGGGTAGGAGGTGCTCCTCCTCCCCAATTCAGCACCGAAATCGGGGATCCTCCTCCCCGTCTCGTTTCAGATCTAAAAGAAAAGAAAGGAGAAGAAGAGAAGAAGAAGAAAGAAAGAAAGAAAGAAAAATCTGGCAGACCGCAGTGGGCGGCGGGGGCCACTAGAACAAAAGAAGAAGGAGATGGGGAAGGAAGAAGATGGAGAGGAGAAAGAAGATGGGGAAGAAAGAAAGAGAGAGAATTTTTTTAA

mRNA sequence

ATGGTCATGCATCACCAAGTTCCTCAACTCTTCTTCTTATTTTCATTTCGTTTGGCCAGCACTTATCTTTCTCAACTTCGATGCTGTCTCCAAGCATTCTCTGGCGAGCGGCGCCGTAGCAGCAGTTTAGGGCAGTTCGTCGATGTGGGTTTGCAGCAGTTTTTCAACGTGGTTTTGGTTTATGCGCAAACAGCAGCGTGGTGGCTCGTTTTTGGGCGTTTTCGTCAAGCTTTCGGCATGGATCTGAAACGGGAAGGGGAGGAGGAGCTCCTCCTCCCCGAAACTCTCTTTTTTAAAAAAAAAAAAACAGAAGAAAGGAAGAGAAAGAAGAAGAAGGGAAGAAGAGAAGAAGAAAAGAAGAAGAAAGAAGAAAAAAAAAAAATTCCGGGAAAGACGCTGGCTGAAAATGCTAAAATGTTCCTACCTCTATCTGAAGGGCAGGATATTATTAAACCCTTGGAGAATCCCATCAAGAAGACAGGGCACCTTCAAATATTATATGGAAATCTTGCTCCCGAGGGTTCAGTAGCTAAGATTACTGGCAAGGAGGGGCTATATTTCTATGGCCCTGAATGTGAACCTAGCAACACGATCAAAGTTCGAAGAGGAGAAAATTTATTGTTTAGTACATTTATTGAGACTCCATGCATGTATATGAAGGAGGTTGTCATGTTCTTCCTTCATGGAAAACCAACTAAAGTGTCAACTGGTGTGAAACAATCAAGAGTATTCTGCACGAGTGTTGGCCACGATTGCTCAACTCCGTTGGAATTACAGCAAAACAAGAGGGAGTTTCGGGTAGGAGGTGCTCCTCCTCCCCAATTCAGCACCGAAATCGGGGATCCTCCTCCCCGTCTCGTTTCAGATCTAAAAGAAAAGAAAGGAGAAGAAGAGAAGAAGAAGAAAGAAAGAAAGAAAGAAAAATCTGGCAGACCGCAGTGGGCGGCGGGGGCCACTAGAACAAAAGAAGAAGGAGATGGGGAAGGAAGAAGATGGAGAGGAGAAAGAAGATGGGGAAGAAAGAAAGAGAGAGAATTTTTTTAA

Coding sequence (CDS)

ATGGTCATGCATCACCAAGTTCCTCAACTCTTCTTCTTATTTTCATTTCGTTTGGCCAGCACTTATCTTTCTCAACTTCGATGCTGTCTCCAAGCATTCTCTGGCGAGCGGCGCCGTAGCAGCAGTTTAGGGCAGTTCGTCGATGTGGGTTTGCAGCAGTTTTTCAACGTGGTTTTGGTTTATGCGCAAACAGCAGCGTGGTGGCTCGTTTTTGGGCGTTTTCGTCAAGCTTTCGGCATGGATCTGAAACGGGAAGGGGAGGAGGAGCTCCTCCTCCCCGAAACTCTCTTTTTTAAAAAAAAAAAAACAGAAGAAAGGAAGAGAAAGAAGAAGAAGGGAAGAAGAGAAGAAGAAAAGAAGAAGAAAGAAGAAAAAAAAAAAATTCCGGGAAAGACGCTGGCTGAAAATGCTAAAATGTTCCTACCTCTATCTGAAGGGCAGGATATTATTAAACCCTTGGAGAATCCCATCAAGAAGACAGGGCACCTTCAAATATTATATGGAAATCTTGCTCCCGAGGGTTCAGTAGCTAAGATTACTGGCAAGGAGGGGCTATATTTCTATGGCCCTGAATGTGAACCTAGCAACACGATCAAAGTTCGAAGAGGAGAAAATTTATTGTTTAGTACATTTATTGAGACTCCATGCATGTATATGAAGGAGGTTGTCATGTTCTTCCTTCATGGAAAACCAACTAAAGTGTCAACTGGTGTGAAACAATCAAGAGTATTCTGCACGAGTGTTGGCCACGATTGCTCAACTCCGTTGGAATTACAGCAAAACAAGAGGGAGTTTCGGGTAGGAGGTGCTCCTCCTCCCCAATTCAGCACCGAAATCGGGGATCCTCCTCCCCGTCTCGTTTCAGATCTAAAAGAAAAGAAAGGAGAAGAAGAGAAGAAGAAGAAAGAAAGAAAGAAAGAAAAATCTGGCAGACCGCAGTGGGCGGCGGGGGCCACTAGAACAAAAGAAGAAGGAGATGGGGAAGGAAGAAGATGGAGAGGAGAAAGAAGATGGGGAAGAAAGAAAGAGAGAGAATTTTTTTAA

Protein sequence

MVMHHQVPQLFFLFSFRLASTYLSQLRCCLQAFSGERRRSSSLGQFVDVGLQQFFNVVLVYAQTAAWWLVFGRFRQAFGMDLKREGEEELLLPETLFFKKKKTEERKRKKKKGRREEEKKKKEEKKKIPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFLHGKPTKVSTGVKQSRVFCTSVGHDCSTPLELQQNKREFRVGGAPPPQFSTEIGDPPPRLVSDLKEKKGEEEKKKKERKKEKSGRPQWAAGATRTKEEGDGEGRRWRGERRWGRKKEREFF
Homology
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BLAST of Lag0001378 vs. NCBI nr
Match: XP_004134011.1 (dihydroxy-acid dehydratase, chloroplastic [Cucumis sativus] >KGN56759.1 hypothetical protein Csa_009701 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-25
Identity = 67/113 (59.29%), Postives = 79/113 (69.91%), Query Frame = 0 

Query: 128 IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 187
           + GKTLAENAK+FLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF
Sbjct: 406 VTGKTLAENAKLFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 465

Query: 188 YGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFLHGKPTKVSTGVKQ 241
            GP         V  GE  + +   + P  +  + V+  + G+  K   G+ +
Sbjct: 466 SGPAL-------VFEGEESMIAAITKDPSSFKGKTVI--IRGEGPKGGPGMPE 509

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BLAST of Lag0001378 vs. NCBI nr
Match: XP_038904820.1 (dihydroxy-acid dehydratase, chloroplastic [Benincasa hispida])

HSP 1 Score: 128.3 bits (321), Expect = 1.3e-25
Identity = 67/113 (59.29%), Postives = 78/113 (69.03%), Query Frame = 0 

Query: 128 IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 187
           + GKTLAENAK+FLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF
Sbjct: 406 VTGKTLAENAKLFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 465

Query: 188 YGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFLHGKPTKVSTGVKQ 241
            GP         V  GE  + +   + P  +    V+  + G+  K   G+ +
Sbjct: 466 SGPAL-------VFEGEESMIAAITKDPSSFKGRTVI--IRGEGPKGGPGMPE 509

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BLAST of Lag0001378 vs. NCBI nr
Match: XP_015887506.1 (dihydroxy-acid dehydratase, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-25
Identity = 66/113 (58.41%), Postives = 79/113 (69.91%), Query Frame = 0 

Query: 128 IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 187
           + GKTLAENAK FLPLS+GQDII+PLENPIKKTGH+QILYGNLAPEGSVAKITGKEGLYF
Sbjct: 396 VTGKTLAENAKSFLPLSQGQDIIRPLENPIKKTGHIQILYGNLAPEGSVAKITGKEGLYF 455

Query: 188 YGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFLHGKPTKVSTGVKQ 241
            GP         V  GE  + +   E P  +  +VV+  + G+  K   G+ +
Sbjct: 456 SGPAL-------VFEGEEAMIAAISENPMSFKGKVVV--IRGEGPKGGPGMAE 499

[Close]
BLAST of Lag0001378 vs. NCBI nr
Match: PON72889.1 (Dihydroxy-acid dehydratase [Trema orientale])

HSP 1 Score: 127.1 bits (318), Expect = 3.0e-25
Identity = 66/113 (58.41%), Postives = 79/113 (69.91%), Query Frame = 0 

Query: 128 IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 187
           + G+TLAENAK FLPLS+GQDII+PLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF
Sbjct: 400 VTGRTLAENAKSFLPLSKGQDIIRPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 459

Query: 188 YGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFLHGKPTKVSTGVKQ 241
            GP         V  GE  + +   E P  +  +VV+  + G+  K   G+ +
Sbjct: 460 SGPAL-------VFEGEESMIAAITENPTSFKGKVVI--IRGEGPKGGPGMPE 503

[Close]
BLAST of Lag0001378 vs. NCBI nr
Match: XP_024932691.1 (dihydroxy-acid dehydratase, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 126.7 bits (317), Expect = 3.9e-25
Identity = 65/113 (57.52%), Postives = 79/113 (69.91%), Query Frame = 0 

Query: 128 IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 187
           + GKTLAENAK FLPLS+GQDII+PLENPIKKTGH+QILYGNLAP+GSVAKITGKEGLYF
Sbjct: 396 VTGKTLAENAKSFLPLSQGQDIIRPLENPIKKTGHIQILYGNLAPQGSVAKITGKEGLYF 455

Query: 188 YGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFLHGKPTKVSTGVKQ 241
            GP         V  GE  + +   E P  +  +VV+  + G+  K   G+ +
Sbjct: 456 SGPAL-------VFEGEEAMIAAISENPMSFKGKVVV--IRGEGPKGGPGMPE 499

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BLAST of Lag0001378 vs. ExPASy Swiss-Prot
Match: Q9LIR4 (Dihydroxy-acid dehydratase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DHAD PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.6e-20
Identity = 55/131 (41.98%), Postives = 78/131 (59.54%), Query Frame = 0 

Query: 128 IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 187
           + G+TLA+N +    L+EGQ+II+PL NPIK+TGH+QIL G+LAP+GSVAKITGKEGLYF
Sbjct: 394 VTGQTLAQNLENVPSLTEGQEIIRPLSNPIKETGHIQILRGDLAPDGSVAKITGKEGLYF 453

Query: 188 YGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFLHGKPTKVSTGVKQ-----SR 247
            GP         V  GE  + +     P  +   VV+  + G+  K   G+ +     S 
Sbjct: 454 SGPAL-------VFEGEESMLAAISADPMSFKGTVVV--IRGEGPKGGPGMPEMLTPTSA 513

Query: 248 VFCTSVGHDCS 254
           +    +G +C+
Sbjct: 514 IMGAGLGKECA 515

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BLAST of Lag0001378 vs. ExPASy Swiss-Prot
Match: Q10318 (Putative dihydroxy-acid dehydratase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17G8.06c PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.9e-17
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 128 IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 187
           + GKTLAEN + F  L+EGQ II+PL NPIK  GHL++L G+LAPEGSVAKITGKEGL F
Sbjct: 381 VTGKTLAENLRGFKDLAEGQKIIRPLSNPIKTEGHLRVLRGSLAPEGSVAKITGKEGLNF 440

Query: 188 YG 190
            G
Sbjct: 441 TG 442

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BLAST of Lag0001378 vs. ExPASy Swiss-Prot
Match: Q11NN5 (Dihydroxy-acid dehydratase OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465) OX=269798 GN=ilvD PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.2e-16
Identity = 42/63 (66.67%), Postives = 48/63 (76.19%), Query Frame = 0 

Query: 128 IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 187
           + GKT+ EN K    L   QD++   ENPIK+TGHLQILYGNLAP+GSVAKITGKEG YF
Sbjct: 349 VTGKTVGENLKEAQDLPTDQDLMYAWENPIKQTGHLQILYGNLAPQGSVAKITGKEGTYF 408

Query: 188 YGP 191
            GP
Sbjct: 409 EGP 411

[Close]
BLAST of Lag0001378 vs. ExPASy Swiss-Prot
Match: A2RKQ9 (Dihydroxy-acid dehydratase OS=Lactococcus lactis subsp. cremoris (strain MG1363) OX=416870 GN=ilvD PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.2e-16
Identity = 45/63 (71.43%), Postives = 50/63 (79.37%), Query Frame = 0 

Query: 128 IPGKTLAENAKMFLPLS-EGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLY 187
           + GKTLAEN K  L L  E QDI++PLENPIK TGHLQILYGNLA  GSVAKI+GKEG +
Sbjct: 356 VTGKTLAENVKTALDLDFESQDIMRPLENPIKATGHLQILYGNLAEGGSVAKISGKEGEF 415

Query: 188 FYG 190
           F G
Sbjct: 416 FKG 418

[Close]
BLAST of Lag0001378 vs. ExPASy Swiss-Prot
Match: Q02YY5 (Dihydroxy-acid dehydratase OS=Lactococcus lactis subsp. cremoris (strain SK11) OX=272622 GN=ilvD PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.4e-16
Identity = 44/63 (69.84%), Postives = 50/63 (79.37%), Query Frame = 0 

Query: 128 IPGKTLAENAKMFLPLS-EGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLY 187
           + GKTLAEN +  L L  + QDII+PLENPIK TGHLQILYGNLA  GSVAKI+GKEG +
Sbjct: 356 VTGKTLAENVETALDLDFDSQDIIRPLENPIKATGHLQILYGNLAEGGSVAKISGKEGEF 415

Query: 188 FYG 190
           F G
Sbjct: 416 FKG 418

[Close]
BLAST of Lag0001378 vs. ExPASy TrEMBL
Match: A0A0A0L6U0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133100 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.9e-26
Identity = 67/113 (59.29%), Postives = 79/113 (69.91%), Query Frame = 0 

Query: 128 IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 187
           + GKTLAENAK+FLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF
Sbjct: 406 VTGKTLAENAKLFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 465

Query: 188 YGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFLHGKPTKVSTGVKQ 241
            GP         V  GE  + +   + P  +  + V+  + G+  K   G+ +
Sbjct: 466 SGPAL-------VFEGEESMIAAITKDPSSFKGKTVI--IRGEGPKGGPGMPE 509

[Close]
BLAST of Lag0001378 vs. ExPASy TrEMBL
Match: A0A6P4A226 (dihydroxy-acid dehydratase, chloroplastic-like OS=Ziziphus jujuba OX=326968 GN=LOC107422557 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 8.4e-26
Identity = 66/113 (58.41%), Postives = 79/113 (69.91%), Query Frame = 0 

Query: 128 IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 187
           + GKTLAENAK FLPLS+GQDII+PLENPIKKTGH+QILYGNLAPEGSVAKITGKEGLYF
Sbjct: 396 VTGKTLAENAKSFLPLSQGQDIIRPLENPIKKTGHIQILYGNLAPEGSVAKITGKEGLYF 455

Query: 188 YGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFLHGKPTKVSTGVKQ 241
            GP         V  GE  + +   E P  +  +VV+  + G+  K   G+ +
Sbjct: 456 SGPAL-------VFEGEEAMIAAISENPMSFKGKVVV--IRGEGPKGGPGMAE 499

[Close]
BLAST of Lag0001378 vs. ExPASy TrEMBL
Match: A0A2P5DHU7 (Dihydroxy-acid dehydratase OS=Trema orientale OX=63057 GN=TorRG33x02_250740 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.4e-25
Identity = 66/113 (58.41%), Postives = 79/113 (69.91%), Query Frame = 0 

Query: 128 IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 187
           + G+TLAENAK FLPLS+GQDII+PLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF
Sbjct: 400 VTGRTLAENAKSFLPLSKGQDIIRPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 459

Query: 188 YGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFLHGKPTKVSTGVKQ 241
            GP         V  GE  + +   E P  +  +VV+  + G+  K   G+ +
Sbjct: 460 SGPAL-------VFEGEESMIAAITENPTSFKGKVVI--IRGEGPKGGPGMPE 503

[Close]
BLAST of Lag0001378 vs. ExPASy TrEMBL
Match: A0A6P3YTD8 (dihydroxy-acid dehydratase, chloroplastic-like OS=Ziziphus jujuba OX=326968 GN=LOC107404461 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-25
Identity = 65/113 (57.52%), Postives = 79/113 (69.91%), Query Frame = 0 

Query: 128 IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 187
           + GKTLAENAK FLPLS+GQDII+PLENPIKKTGH+QILYGNLAP+GSVAKITGKEGLYF
Sbjct: 396 VTGKTLAENAKSFLPLSQGQDIIRPLENPIKKTGHIQILYGNLAPQGSVAKITGKEGLYF 455

Query: 188 YGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFLHGKPTKVSTGVKQ 241
            GP         V  GE  + +   E P  +  +VV+  + G+  K   G+ +
Sbjct: 456 SGPAL-------VFEGEEAMIAAISENPMSFKGKVVV--IRGEGPKGGPGMPE 499

[Close]
BLAST of Lag0001378 vs. ExPASy TrEMBL
Match: A0A6P6GEZ1 (dihydroxy-acid dehydratase, chloroplastic-like OS=Ziziphus jujuba OX=326968 GN=LOC107427012 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-25
Identity = 65/113 (57.52%), Postives = 79/113 (69.91%), Query Frame = 0 

Query: 128 IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 187
           + GKTLAENAK FLPLS+GQDII+PLENPIKKTGH+QILYGNLAP+GSVAKITGKEGLYF
Sbjct: 396 VTGKTLAENAKSFLPLSQGQDIIRPLENPIKKTGHIQILYGNLAPQGSVAKITGKEGLYF 455

Query: 188 YGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFLHGKPTKVSTGVKQ 241
            GP         V  GE  + +   E P  +  +VV+  + G+  K   G+ +
Sbjct: 456 SGPAL-------VFEGEEAMIAAISENPMSFKGKVVV--IRGEGPKGGPGMPE 499

[Close]
BLAST of Lag0001378 vs. TAIR 10
Match: AT3G23940.1 (dehydratase family )

HSP 1 Score: 99.8 bits (247), Expect = 4.7e-21
Identity = 55/131 (41.98%), Postives = 78/131 (59.54%), Query Frame = 0 

Query: 128 IPGKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYF 187
           + G+TLA+N +    L+EGQ+II+PL NPIK+TGH+QIL G+LAP+GSVAKITGKEGLYF
Sbjct: 394 VTGQTLAQNLENVPSLTEGQEIIRPLSNPIKETGHIQILRGDLAPDGSVAKITGKEGLYF 453

Query: 188 YGPECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFLHGKPTKVSTGVKQ-----SR 247
            GP         V  GE  + +     P  +   VV+  + G+  K   G+ +     S 
Sbjct: 454 SGPAL-------VFEGEESMLAAISADPMSFKGTVVV--IRGEGPKGGPGMPEMLTPTSA 513

Query: 248 VFCTSVGHDCS 254
           +    +G +C+
Sbjct: 514 IMGAGLGKECA 515

[Close]
BLAST of Lag0001378 vs. TAIR 10
Match: AT3G23940.2 (dehydratase family )

HSP 1 Score: 98.6 bits (244), Expect = 1.0e-20
Identity = 55/129 (42.64%), Postives = 77/129 (59.69%), Query Frame = 0 

Query: 130 GKTLAENAKMFLPLSEGQDIIKPLENPIKKTGHLQILYGNLAPEGSVAKITGKEGLYFYG 189
           G+TLA+N +    L+EGQ+II+PL NPIK+TGH+QIL G+LAP+GSVAKITGKEGLYF G
Sbjct: 394 GQTLAQNLENVPSLTEGQEIIRPLSNPIKETGHIQILRGDLAPDGSVAKITGKEGLYFSG 453

Query: 190 PECEPSNTIKVRRGENLLFSTFIETPCMYMKEVVMFFLHGKPTKVSTGVKQ-----SRVF 249
           P         V  GE  + +     P  +   VV+  + G+  K   G+ +     S + 
Sbjct: 454 PAL-------VFEGEESMLAAISADPMSFKGTVVV--IRGEGPKGGPGMPEMLTPTSAIM 513

Query: 250 CTSVGHDCS 254
              +G +C+
Sbjct: 514 GAGLGKECA 513

The following BLAST results are available for this feature:
BLAST of Lag0001378 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004134011.11.0e-2559.29dihydroxy-acid dehydratase, chloroplastic [Cucumis sativus] >KGN56759.1 hypothet... [more]
XP_038904820.11.3e-2559.29dihydroxy-acid dehydratase, chloroplastic [Benincasa hispida][more]
XP_015887506.11.7e-2558.41dihydroxy-acid dehydratase, chloroplastic-like [Ziziphus jujuba][more]
PON72889.13.0e-2558.41Dihydroxy-acid dehydratase [Trema orientale][more]
XP_024932691.13.9e-2557.52dihydroxy-acid dehydratase, chloroplastic-like [Ziziphus jujuba][more]
BLAST of Lag0001378 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LIR46.6e-2041.98Dihydroxy-acid dehydratase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DHA... [more]
Q103186.9e-1769.35Putative dihydroxy-acid dehydratase, mitochondrial OS=Schizosaccharomyces pombe ... [more]
Q11NN51.2e-1666.67Dihydroxy-acid dehydratase OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 17... [more]
A2RKQ91.2e-1671.43Dihydroxy-acid dehydratase OS=Lactococcus lactis subsp. cremoris (strain MG1363)... [more]
Q02YY53.4e-1669.84Dihydroxy-acid dehydratase OS=Lactococcus lactis subsp. cremoris (strain SK11) O... [more]
BLAST of Lag0001378 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6U04.9e-2659.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133100 PE=3 SV=1[more]
A0A6P4A2268.4e-2658.41dihydroxy-acid dehydratase, chloroplastic-like OS=Ziziphus jujuba OX=326968 GN=L... [more]
A0A2P5DHU71.4e-2558.41Dihydroxy-acid dehydratase OS=Trema orientale OX=63057 GN=TorRG33x02_250740 PE=3... [more]
A0A6P3YTD81.9e-2557.52dihydroxy-acid dehydratase, chloroplastic-like OS=Ziziphus jujuba OX=326968 GN=L... [more]
A0A6P6GEZ11.9e-2557.52dihydroxy-acid dehydratase, chloroplastic-like OS=Ziziphus jujuba OX=326968 GN=L... [more]
BLAST of Lag0001378 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G23940.14.7e-2141.98dehydratase family [more]
AT3G23940.21.0e-2042.64dehydratase family [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 100..126
NoneNo IPR availableCOILSCoilCoilcoord: 287..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 321..347
NoneNo IPR availablePANTHERPTHR21000:SF13HYPOTHETICAL DIHYDROXYACID DEHYDRATASE (EUROFUNG)coord: 128..189
NoneNo IPR availablePANTHERPTHR21000DIHYDROXY-ACID DEHYDRATASE DADcoord: 128..189
IPR000581Dihydroxy-acid/6-phosphogluconate dehydratasePFAMPF00920ILVD_EDDcoord: 123..187
e-value: 1.3E-13
score: 50.5

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0001378.1Lag0001378.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009082 branched-chain amino acid biosynthetic process
biological_process GO:0007275 multicellular organism development
molecular_function GO:0005488 binding
molecular_function GO:0004160 dihydroxy-acid dehydratase activity
molecular_function GO:0003824 catalytic activity